Abstract
Epididymal retinoic acid-binding protein (ERABP) is the major androgen-dependent protein present in the lumen of the epididymis and is thought to be involved in sperm maturation. It displays a high degree of three-dimensional structural similarity to serum retinol-binding protein (RBP). Although both proteins interact with retinoids, RBP exhibits a broad specificity, binding retinol, retinoic acid and retinaldehyde with roughly equal affinities, whereas ERABP is specific for all-trans- and 9-cis-retinoic acids. Consistent with this, the binding pockets of the two proteins are different: in RBP it is predominantly hydrophobic, whereas that for ERABP is amphipathic, with a network of charged residues at the open end of the binding pocket. In order to investigate the roles of these charged residues, Arg-80 and Glu-63 have been mutated to isoleucine. The resultant double mutant, Glu-63-->Ile/Arg-80-->Ile, as well as the wild-type protein, were subsequently expressed in Escherichia coli as fusion proteins, with the streptavidin recognition sequence (Strep) tagged to their C-termini. The expressed proteins were purified in a single step by streptavidin-affinity chromatography and their ligand-binding properties were examined using fluorimetric titrations. Whereas the wild-type ERABP binds only retinoic acid, the double mutant is capable of binding retinol, retinoic acid and retinaldehyde with similar affinities. These observations provide experimental support for the proposition that the charged residues near the open end of the binding pocket are responsible for restricting the specificity of ERABP for retinoic acid. These studies demonstrate that changes in specificity can be engineered into lipocalins.
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Selected References
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- Cogan U., Kopelman M., Mokady S., Shinitzky M. Binding affinities of retinol and related compounds to retinol binding proteins. Eur J Biochem. 1976 May 17;65(1):71–78. doi: 10.1111/j.1432-1033.1976.tb10390.x. [DOI] [PubMed] [Google Scholar]
- Girotti M., Jones R., Emery D. C., Chia W., Hall L. Structure and expression of the rat epididymal secretory protein I gene. An androgen-regulated member of the lipocalin superfamily with a rare splice donor site. Biochem J. 1992 Jan 1;281(Pt 1):203–210. doi: 10.1042/bj2810203. [DOI] [PMC free article] [PubMed] [Google Scholar]
- LOWRY O. H., ROSEBROUGH N. J., FARR A. L., RANDALL R. J. Protein measurement with the Folin phenol reagent. J Biol Chem. 1951 Nov;193(1):265–275. [PubMed] [Google Scholar]
- Newcomer M. E., Jones T. A., Aqvist J., Sundelin J., Eriksson U., Rask L., Peterson P. A. The three-dimensional structure of retinol-binding protein. EMBO J. 1984 Jul;3(7):1451–1454. doi: 10.1002/j.1460-2075.1984.tb01995.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Newcomer M. E., Ong D. E. Purification and crystallization of a retinoic acid-binding protein from rat epididymis. Identity with the major androgen-dependent epididymal proteins. J Biol Chem. 1990 Aug 5;265(22):12876–12879. [PubMed] [Google Scholar]
- Newcomer M. E. Structure of the epididymal retinoic acid binding protein at 2.1 A resolution. Structure. 1993 Sep 15;1(1):7–18. doi: 10.1016/0969-2126(93)90004-z. [DOI] [PubMed] [Google Scholar]
- Ong D. E., Chytil F. Presence of novel retinoic acid-binding proteins in the lumen of rat epididymis. Arch Biochem Biophys. 1988 Dec;267(2):474–478. doi: 10.1016/0003-9861(88)90053-7. [DOI] [PubMed] [Google Scholar]
- Ong D. E., Crow J. A., Chytil F. Radioimmunochemical determination of cellular retinol- and cellular retinoic acid-binding proteins in cytosols of rat tissues. J Biol Chem. 1982 Nov 25;257(22):13385–13389. [PubMed] [Google Scholar]
- Schmidt T. G., Skerra A. The random peptide library-assisted engineering of a C-terminal affinity peptide, useful for the detection and purification of a functional Ig Fv fragment. Protein Eng. 1993 Jan;6(1):109–122. doi: 10.1093/protein/6.1.109. [DOI] [PubMed] [Google Scholar]
- Sivaprasadarao A., Findlay J. B. Structure-function studies on human retinol-binding protein using site-directed mutagenesis. Biochem J. 1994 Jun 1;300(Pt 2):437–442. doi: 10.1042/bj3000437. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Towbin H., Staehelin T., Gordon J. Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications. Proc Natl Acad Sci U S A. 1979 Sep;76(9):4350–4354. doi: 10.1073/pnas.76.9.4350. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Walker J. E., Jones R., Moore A., Hamilton D. W., Hall L. Analysis of major androgen-regulated cDNA clones from the rat epididymis. Mol Cell Endocrinol. 1990 Nov 12;74(1):61–68. doi: 10.1016/0303-7207(90)90205-m. [DOI] [PubMed] [Google Scholar]
