Abstract
Human mucin gene MUC5AC is clustered with MUC2, MUC5B and MUC6 on chromosome 11p15.5. We report here the full length cDNA sequence upstream of the repetitive region of human MUC5AC. We have also determined the sequence of its large central tandem repeat array. The 5'-region reveals high degree of sequence similarity with MUC2 and MUC5B and codes for 1336 amino acids organized into a signal peptide, four pro-von Willebrand factor-like D domains (D1, D2, D' and D3) and a short domain which connects to the central repetitive region. In the central region, 17 major domains have been identified. Nine code for cysteine-rich domains (Cys-domains 1-9) and exhibit high sequence similarity to the cysteine-rich domains described in the central region of MUC2 and MUC5B. Cys-domains 1-5 are interspersed by domains enriched with serine, threonine, and proline residues. Cys-domains 1-9 are interspersed by four domains (TR1-TR4) composed of various numbers of MUC5AC-type repeats. Southern-blot analyses reveal allelic variations both in length and nucleotide sequence. The length polymorphism which is due to variable numbers of tandem repeats is located in TR1 and TR4, whereas a mutation polymorphism detected with TaqI is located in Cys-domain 6. In this study, the organization of MUC5AC has been entirely elucidated showing extensive similarity to the other chromosome 11p15 MUC genes, particularly MUC5B, and providing additional arguments for common evolution from a single ancestral gene.
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- Aubert J. P., Porchet N., Crepin M., Duterque-Coquillaud M., Vergnes G., Mazzuca M., Debuire B., Petitprez D., Degand P. Evidence for different human tracheobronchial mucin peptides deduced from nucleotide cDNA sequences. Am J Respir Cell Mol Biol. 1991 Aug;5(2):178–185. doi: 10.1165/ajrcmb/5.2.178. [DOI] [PubMed] [Google Scholar]
- Balagué C., Audié J. P., Porchet N., Real F. X. In situ hybridization shows distinct patterns of mucin gene expression in normal, benign, and malignant pancreas tissues. Gastroenterology. 1995 Sep;109(3):953–964. doi: 10.1016/0016-5085(95)90406-9. [DOI] [PubMed] [Google Scholar]
- Bartman A. E., Sanderson S. J., Ewing S. L., Niehans G. A., Wiehr C. L., Evans M. K., Ho S. B. Aberrant expression of MUC5AC and MUC6 gastric mucin genes in colorectal polyps. Int J Cancer. 1999 Jan 18;80(2):210–218. doi: 10.1002/(sici)1097-0215(19990118)80:2<210::aid-ijc9>3.0.co;2-u. [DOI] [PubMed] [Google Scholar]
- Bobek L. A., Liu J., Sait S. N., Shows T. B., Bobek Y. A., Levine M. J. Structure and chromosomal localization of the human salivary mucin gene, MUC7. Genomics. 1996 Feb 1;31(3):277–282. doi: 10.1006/geno.1996.0049. [DOI] [PubMed] [Google Scholar]
- Buisine M. P., Desseyn J. L., Porchet N., Degand P., Laine A., Aubert J. P. Genomic organization of the 3'-region of the human MUC5AC mucin gene: additional evidence for a common ancestral gene for the 11p15.5 mucin gene family. Biochem J. 1998 Jun 15;332(Pt 3):729–738. doi: 10.1042/bj3320729. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Buisine M. P., Devisme L., Copin M. C., Durand-Réville M., Gosselin B., Aubert J. P., Porchet N. Developmental mucin gene expression in the human respiratory tract. Am J Respir Cell Mol Biol. 1999 Feb;20(2):209–218. doi: 10.1165/ajrcmb.20.2.3259. [DOI] [PubMed] [Google Scholar]
- Buisine M. P., Devisme L., Savidge T. C., Gespach C., Gosselin B., Porchet N., Aubert J. P. Mucin gene expression in human embryonic and fetal intestine. Gut. 1998 Oct;43(4):519–524. doi: 10.1136/gut.43.4.519. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Buisine M. P., Janin A., Maunoury V., Audié J. P., Delescaut M. P., Copin M. C., Colombel J. F., Degand P., Aubert J. P., Porchet N. Aberrant expression of a human mucin gene (MUC5AC) in rectosigmoid villous adenoma. Gastroenterology. 1996 Jan;110(1):84–91. doi: 10.1053/gast.1996.v110.pm8536891. [DOI] [PubMed] [Google Scholar]
- Debailleul V., Laine A., Huet G., Mathon P., d'Hooghe M. C., Aubert J. P., Porchet N. Human mucin genes MUC2, MUC3, MUC4, MUC5AC, MUC5B, and MUC6 express stable and extremely large mRNAs and exhibit a variable length polymorphism. An improved method to analyze large mRNAs. J Biol Chem. 1998 Jan 9;273(2):881–890. doi: 10.1074/jbc.273.2.881. [DOI] [PubMed] [Google Scholar]
- Desseyn J. L., Aubert J. P., Porchet N., Laine A. Evolution of the large secreted gel-forming mucins. Mol Biol Evol. 2000 Aug;17(8):1175–1184. doi: 10.1093/oxfordjournals.molbev.a026400. [DOI] [PubMed] [Google Scholar]
- Desseyn J. L., Aubert J. P., Van Seuningen I., Porchet N., Laine A. Genomic organization of the 3' region of the human mucin gene MUC5B. J Biol Chem. 1997 Jul 4;272(27):16873–16883. doi: 10.1074/jbc.272.27.16873. [DOI] [PubMed] [Google Scholar]
- Desseyn J. L., Buisine M. P., Porchet N., Aubert J. P., Laine A. Genomic organization of the human mucin gene MUC5B. cDNA and genomic sequences upstream of the large central exon. J Biol Chem. 1998 Nov 13;273(46):30157–30164. doi: 10.1074/jbc.273.46.30157. [DOI] [PubMed] [Google Scholar]
- Desseyn J. L., Guyonnet-Dupérat V., Porchet N., Aubert J. P., Laine A. Human mucin gene MUC5B, the 10.7-kb large central exon encodes various alternate subdomains resulting in a super-repeat. Structural evidence for a 11p15.5 gene family. J Biol Chem. 1997 Feb 7;272(6):3168–3178. doi: 10.1074/jbc.272.6.3168. [DOI] [PubMed] [Google Scholar]
- Gendler S. J., Lancaster C. A., Taylor-Papadimitriou J., Duhig T., Peat N., Burchell J., Pemberton L., Lalani E. N., Wilson D. Molecular cloning and expression of human tumor-associated polymorphic epithelial mucin. J Biol Chem. 1990 Sep 5;265(25):15286–15293. [PubMed] [Google Scholar]
- Gross M. S., Guyonnet-Duperat V., Porchet N., Bernheim A., Aubert J. P., Nguyen V. C. Mucin 4 (MUC4) gene: regional assignment (3q29) and RFLP analysis. Ann Genet. 1992;35(1):21–26. [PubMed] [Google Scholar]
- Gum J. R., Jr, Hicks J. W., Toribara N. W., Rothe E. M., Lagace R. E., Kim Y. S. The human MUC2 intestinal mucin has cysteine-rich subdomains located both upstream and downstream of its central repetitive region. J Biol Chem. 1992 Oct 25;267(30):21375–21383. [PubMed] [Google Scholar]
- Gum J. R., Jr, Hicks J. W., Toribara N. W., Siddiki B., Kim Y. S. Molecular cloning of human intestinal mucin (MUC2) cDNA. Identification of the amino terminus and overall sequence similarity to prepro-von Willebrand factor. J Biol Chem. 1994 Jan 28;269(4):2440–2446. [PubMed] [Google Scholar]
- Guyonnet Duperat V., Audie J. P., Debailleul V., Laine A., Buisine M. P., Galiegue-Zouitina S., Pigny P., Degand P., Aubert J. P., Porchet N. Characterization of the human mucin gene MUC5AC: a consensus cysteine-rich domain for 11p15 mucin genes? Biochem J. 1995 Jan 1;305(Pt 1):211–219. doi: 10.1042/bj3050211. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hansen J. E., Lund O., Tolstrup N., Gooley A. A., Williams K. L., Brunak S. NetOglyc: prediction of mucin type O-glycosylation sites based on sequence context and surface accessibility. Glycoconj J. 1998 Feb;15(2):115–130. doi: 10.1023/a:1006960004440. [DOI] [PubMed] [Google Scholar]
- Ho S. B., Roberton A. M., Shekels L. L., Lyftogt C. T., Niehans G. A., Toribara N. W. Expression cloning of gastric mucin complementary DNA and localization of mucin gene expression. Gastroenterology. 1995 Sep;109(3):735–747. doi: 10.1016/0016-5085(95)90380-1. [DOI] [PubMed] [Google Scholar]
- Klomp L. W., Van Rens L., Strous G. J. Cloning and analysis of human gastric mucin cDNA reveals two types of conserved cysteine-rich domains. Biochem J. 1995 Jun 15;308(Pt 3):831–838. doi: 10.1042/bj3080831. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kozak M. An analysis of 5'-noncoding sequences from 699 vertebrate messenger RNAs. Nucleic Acids Res. 1987 Oct 26;15(20):8125–8148. doi: 10.1093/nar/15.20.8125. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Lagow E., DeSouza M. M., Carson D. D. Mammalian reproductive tract mucins. Hum Reprod Update. 1999 Jul-Aug;5(4):280–292. doi: 10.1093/humupd/5.4.280. [DOI] [PubMed] [Google Scholar]
- Lan M. S., Batra S. K., Qi W. N., Metzgar R. S., Hollingsworth M. A. Cloning and sequencing of a human pancreatic tumor mucin cDNA. J Biol Chem. 1990 Sep 5;265(25):15294–15299. [PubMed] [Google Scholar]
- Lancaster C. A., Peat N., Duhig T., Wilson D., Taylor-Papadimitriou J., Gendler S. J. Structure and expression of the human polymorphic epithelial mucin gene: an expressed VNTR unit. Biochem Biophys Res Commun. 1990 Dec 31;173(3):1019–1029. doi: 10.1016/s0006-291x(05)80888-5. [DOI] [PubMed] [Google Scholar]
- Lesuffleur T., Roche F., Hill A. S., Lacasa M., Fox M., Swallow D. M., Zweibaum A., Real F. X. Characterization of a mucin cDNA clone isolated from HT-29 mucus-secreting cells. The 3' end of MUC5AC? J Biol Chem. 1995 Jun 9;270(23):13665–13673. doi: 10.1074/jbc.270.23.13665. [DOI] [PubMed] [Google Scholar]
- Li D., Gallup M., Fan N., Szymkowski D. E., Basbaum C. B. Cloning of the amino-terminal and 5'-flanking region of the human MUC5AC mucin gene and transcriptional up-regulation by bacterial exoproducts. J Biol Chem. 1998 Mar 20;273(12):6812–6820. doi: 10.1074/jbc.273.12.6812. [DOI] [PubMed] [Google Scholar]
- Mancuso D. J., Tuley E. A., Westfield L. A., Worrall N. K., Shelton-Inloes B. B., Sorace J. M., Alevy Y. G., Sadler J. E. Structure of the gene for human von Willebrand factor. J Biol Chem. 1989 Nov 25;264(33):19514–19527. [PubMed] [Google Scholar]
- Mayadas T. N., Wagner D. D. Vicinal cysteines in the prosequence play a role in von Willebrand factor multimer assembly. Proc Natl Acad Sci U S A. 1992 Apr 15;89(8):3531–3535. doi: 10.1073/pnas.89.8.3531. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Meezaman D., Charles P., Daskal E., Polymeropoulos M. H., Martin B. M., Rose M. C. Cloning and analysis of cDNA encoding a major airway glycoprotein, human tracheobronchial mucin (MUC5). J Biol Chem. 1994 Apr 29;269(17):12932–12939. [PubMed] [Google Scholar]
- Nollet S., Moniaux N., Maury J., Petitprez D., Degand P., Laine A., Porchet N., Aubert J. P. Human mucin gene MUC4: organization of its 5'-region and polymorphism of its central tandem repeat array. Biochem J. 1998 Jun 15;332(Pt 3):739–748. doi: 10.1042/bj3320739. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Perez-Vilar J., Hill R. L. Identification of the half-cystine residues in porcine submaxillary mucin critical for multimerization through the D-domains. Roles of the CGLCG motif in the D1- and D3-domains. J Biol Chem. 1998 Dec 18;273(51):34527–34534. doi: 10.1074/jbc.273.51.34527. [DOI] [PubMed] [Google Scholar]
- Pigny P., Guyonnet-Duperat V., Hill A. S., Pratt W. S., Galiegue-Zouitina S., d'Hooge M. C., Laine A., Van-Seuningen I., Degand P., Gum J. R. Human mucin genes assigned to 11p15.5: identification and organization of a cluster of genes. Genomics. 1996 Dec 15;38(3):340–352. doi: 10.1006/geno.1996.0637. [DOI] [PubMed] [Google Scholar]
- Pigny P., Pratt W. S., Laine A., Leclercq A., Swallow D. M., Nguyen V. C., Aubert J. P., Porchet N. The MUC5AC gene: RFLP analysis with the Jer58 probe. Hum Genet. 1995 Sep;96(3):367–368. doi: 10.1007/BF00210427. [DOI] [PubMed] [Google Scholar]
- Porchet N., Nguyen V. C., Dufosse J., Audie J. P., Guyonnet-Duperat V., Gross M. S., Denis C., Degand P., Bernheim A., Aubert J. P. Molecular cloning and chromosomal localization of a novel human tracheo-bronchial mucin cDNA containing tandemly repeated sequences of 48 base pairs. Biochem Biophys Res Commun. 1991 Mar 15;175(2):414–422. doi: 10.1016/0006-291x(91)91580-6. [DOI] [PubMed] [Google Scholar]
- Rose M. C., Kaufman B., Martin B. M. Proteolytic fragmentation and peptide mapping of human carboxyamidomethylated tracheobronchial mucin. J Biol Chem. 1989 May 15;264(14):8193–8199. [PubMed] [Google Scholar]
- Temann U. A., Prasad B., Gallup M. W., Basbaum C., Ho S. B., Flavell R. A., Rankin J. A. A novel role for murine IL-4 in vivo: induction of MUC5AC gene expression and mucin hypersecretion. Am J Respir Cell Mol Biol. 1997 Apr;16(4):471–478. doi: 10.1165/ajrcmb.16.4.9115759. [DOI] [PubMed] [Google Scholar]
- Toribara N. W., Gum J. R., Jr, Culhane P. J., Lagace R. E., Hicks J. W., Petersen G. M., Kim Y. S. MUC-2 human small intestinal mucin gene structure. Repeated arrays and polymorphism. J Clin Invest. 1991 Sep;88(3):1005–1013. doi: 10.1172/JCI115360. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Toribara N. W., Ho S. B., Gum E., Gum J. R., Jr, Lau P., Kim Y. S. The carboxyl-terminal sequence of the human secretory mucin, MUC6. Analysis Of the primary amino acid sequence. J Biol Chem. 1997 Jun 27;272(26):16398–16403. doi: 10.1074/jbc.272.26.16398. [DOI] [PubMed] [Google Scholar]
- Toribara N. W., Roberton A. M., Ho S. B., Kuo W. L., Gum E., Hicks J. W., Gum J. R., Jr, Byrd J. C., Siddiki B., Kim Y. S. Human gastric mucin. Identification of a unique species by expression cloning. J Biol Chem. 1993 Mar 15;268(8):5879–5885. [PubMed] [Google Scholar]
- Vinall L. E., Hill A. S., Pigny P., Pratt W. S., Toribara N., Gum J. R., Kim Y. S., Porchet N., Aubert J. P., Swallow D. M. Variable number tandem repeat polymorphism of the mucin genes located in the complex on 11p15.5. Hum Genet. 1998 Mar;102(3):357–366. doi: 10.1007/s004390050705. [DOI] [PubMed] [Google Scholar]
- Zrihan-Licht S., Vos H. L., Baruch A., Elroy-Stein O., Sagiv D., Keydar I., Hilkens J., Wreschner D. H. Characterization and molecular cloning of a novel MUC1 protein, devoid of tandem repeats, expressed in human breast cancer tissue. Eur J Biochem. 1994 Sep 1;224(2):787–795. doi: 10.1111/j.1432-1033.1994.00787.x. [DOI] [PubMed] [Google Scholar]
- van de Bovenkamp J. H., Hau C. M., Strous G. J., Büller H. A., Dekker J., Einerhand A. W. Molecular cloning of human gastric mucin MUC5AC reveals conserved cysteine-rich D-domains and a putative leucine zipper motif. Biochem Biophys Res Commun. 1998 Apr 28;245(3):853–859. doi: 10.1006/bbrc.1998.8535. [DOI] [PubMed] [Google Scholar]