Abstract
The heterotrimeric eukaryotic initiation factor (eIF) 2 binds the initiator methionyl-tRNA in a GTP-dependent mode and delivers it to the 40 S ribosomal subunit. In the present study, we have identified amino acid residues in eIF2beta required for binding to eIF2gamma in yeast. Alteration of six residues in the central region of eIF2beta abolished this interaction, as determined by GST-pull down and two-hybrid assays, and leads to cell lethality. Substitution of (131)Tyr and (132)Ser by alanine residues ((131)YS), although abolishing the binding to eIF2gamma in these assays, resulted in a functional but defective protein in vivo, imparting a temperature-sensitive growth phenotype to cells. A dramatically weakened association of this mutant protein with eIF2gamma in vivo was shown by co-immunoprecipitation. The (131)YS mutation in eIF2beta allows translation to initiate at non-AUG codons, as defined by the ability of cells carrying an initiator codon mutation in the HIS4 mRNA to grow in the absence of histidine. The combination of this mutation with the (264)Ser-->Tyr alteration, a previously isolated suppressor of initiator codon mutations which has been shown to increase the spontaneous GTP hydrolysis in the ternary complex, caused a recessive lethality, suggesting additive defects. Thus the impaired interaction of these two subunits represents a novel type of defect in eIF2 function, providing in vivo evidence that the strength of interaction between eIF2beta and eIF2gamma defines the correct usage of the AUG codon for translation initiation.
Full Text
The Full Text of this article is available as a PDF (372.5 KB).
Selected References
These references are in PubMed. This may not be the complete list of references from this article.
- Asano K., Krishnamoorthy T., Phan L., Pavitt G. D., Hinnebusch A. G. Conserved bipartite motifs in yeast eIF5 and eIF2Bepsilon, GTPase-activating and GDP-GTP exchange factors in translation initiation, mediate binding to their common substrate eIF2. EMBO J. 1999 Mar 15;18(6):1673–1688. doi: 10.1093/emboj/18.6.1673. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Bommer U. A., Kraft R., Kurzchalia T. V., Price N. T., Proud C. G. Amino acid sequence analysis of the beta- and gamma-subunits of eukaryotic initiation factor eIF-2. Identification of regions interacting with GTP. Biochim Biophys Acta. 1991 Sep 20;1079(3):308–315. doi: 10.1016/0167-4838(91)90074-a. [DOI] [PubMed] [Google Scholar]
- Bult C. J., White O., Olsen G. J., Zhou L., Fleischmann R. D., Sutton G. G., Blake J. A., FitzGerald L. M., Clayton R. A., Gocayne J. D. Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii. Science. 1996 Aug 23;273(5278):1058–1073. doi: 10.1126/science.273.5278.1058. [DOI] [PubMed] [Google Scholar]
- Castilho-Valavicius B., Thompson G. M., Donahue T. F. Mutation analysis of the Cys-X2-Cys-X19-Cys-X2-Cys motif in the beta subunit of eukaryotic translation initiation factor 2. Gene Expr. 1992;2(3):297–309. [PMC free article] [PubMed] [Google Scholar]
- Castilho-Valavicius B., Yoon H., Donahue T. F. Genetic characterization of the Saccharomyces cerevisiae translational initiation suppressors sui1, sui2 and SUI3 and their effects on HIS4 expression. Genetics. 1990 Mar;124(3):483–495. doi: 10.1093/genetics/124.3.483. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Cigan A. M., Pabich E. K., Feng L., Donahue T. F. Yeast translation initiation suppressor sui2 encodes the alpha subunit of eukaryotic initiation factor 2 and shares sequence identity with the human alpha subunit. Proc Natl Acad Sci U S A. 1989 Apr;86(8):2784–2788. doi: 10.1073/pnas.86.8.2784. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Das S., Ghosh R., Maitra U. Eukaryotic translation initiation factor 5 functions as a GTPase-activating protein. J Biol Chem. 2000 Nov 22;276(9):6720–6726. doi: 10.1074/jbc.M008863200. [DOI] [PubMed] [Google Scholar]
- Das S., Maiti T., Das K., Maitra U. Specific interaction of eukaryotic translation initiation factor 5 (eIF5) with the beta-subunit of eIF2. J Biol Chem. 1997 Dec 12;272(50):31712–31718. doi: 10.1074/jbc.272.50.31712. [DOI] [PubMed] [Google Scholar]
- Donahue T. F., Cigan A. M., Pabich E. K., Valavicius B. C. Mutations at a Zn(II) finger motif in the yeast eIF-2 beta gene alter ribosomal start-site selection during the scanning process. Cell. 1988 Aug 26;54(5):621–632. doi: 10.1016/s0092-8674(88)80006-0. [DOI] [PubMed] [Google Scholar]
- Dorris D. R., Erickson F. L., Hannig E. M. Mutations in GCD11, the structural gene for eIF-2 gamma in yeast, alter translational regulation of GCN4 and the selection of the start site for protein synthesis. EMBO J. 1995 May 15;14(10):2239–2249. doi: 10.1002/j.1460-2075.1995.tb07218.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Erickson F. L., Hannig E. M. Ligand interactions with eukaryotic translation initiation factor 2: role of the gamma-subunit. EMBO J. 1996 Nov 15;15(22):6311–6320. [PMC free article] [PubMed] [Google Scholar]
- Erickson F. L., Nika J., Rippel S., Hannig E. M. Minimum requirements for the function of eukaryotic translation initiation factor 2. Genetics. 2001 May;158(1):123–132. doi: 10.1093/genetics/158.1.123. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Gaspar N. J., Kinzy T. G., Scherer B. J., Hümbelin M., Hershey J. W., Merrick W. C. Translation initiation factor eIF-2. Cloning and expression of the human cDNA encoding the gamma-subunit. J Biol Chem. 1994 Feb 4;269(5):3415–3422. [PubMed] [Google Scholar]
- Huang H. K., Yoon H., Hannig E. M., Donahue T. F. GTP hydrolysis controls stringent selection of the AUG start codon during translation initiation in Saccharomyces cerevisiae. Genes Dev. 1997 Sep 15;11(18):2396–2413. doi: 10.1101/gad.11.18.2396. [DOI] [PMC free article] [PubMed] [Google Scholar]
- James P., Halladay J., Craig E. A. Genomic libraries and a host strain designed for highly efficient two-hybrid selection in yeast. Genetics. 1996 Dec;144(4):1425–1436. doi: 10.1093/genetics/144.4.1425. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kimball S. R., Heinzinger N. K., Horetsky R. L., Jefferson L. S. Identification of interprotein interactions between the subunits of eukaryotic initiation factors eIF2 and eIF2B. J Biol Chem. 1998 Jan 30;273(5):3039–3044. doi: 10.1074/jbc.273.5.3039. [DOI] [PubMed] [Google Scholar]
- Laurino J. P., Thompson G. M., Pacheco E., Castilho B. A. The beta subunit of eukaryotic translation initiation factor 2 binds mRNA through the lysine repeats and a region comprising the C2-C2 motif. Mol Cell Biol. 1999 Jan;19(1):173–181. doi: 10.1128/mcb.19.1.173. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Paulin F. E., Campbell L. E., O'Brien K., Loughlin J., Proud C. G. Eukaryotic translation initiation factor 5 (eIF5) acts as a classical GTPase-activator protein. Curr Biol. 2001 Jan 9;11(1):55–59. doi: 10.1016/s0960-9822(00)00025-7. [DOI] [PubMed] [Google Scholar]
- Pestova T. V., Lomakin I. B., Lee J. H., Choi S. K., Dever T. E., Hellen C. U. The joining of ribosomal subunits in eukaryotes requires eIF5B. Nature. 2000 Jan 20;403(6767):332–335. doi: 10.1038/35002118. [DOI] [PubMed] [Google Scholar]
- Smith D. B., Johnson K. S. Single-step purification of polypeptides expressed in Escherichia coli as fusions with glutathione S-transferase. Gene. 1988 Jul 15;67(1):31–40. doi: 10.1016/0378-1119(88)90005-4. [DOI] [PubMed] [Google Scholar]
- Thompson G. M., Pacheco E., Melo E. O., Castilho B. A. Conserved sequences in the beta subunit of archaeal and eukaryal translation initiation factor 2 (eIF2), absent from eIF5, mediate interaction with eIF2gamma. Biochem J. 2000 May 1;347(Pt 3):703–709. [PMC free article] [PubMed] [Google Scholar]