Abstract
Recent advances suggest that the molecular components of the circadian clock generate a self-sustaining transcriptional-translational feedback loop with a period of approx. 24 h. The precise expression profiles of human clock genes and their products have not been elucidated. We cloned human clock genes, including per1, per2, per3, cry2 and clock, and evaluated their circadian mRNA expression profiles in WI-38 fibroblasts stimulated with serum. Transcripts of hPer1, hPer2, hPer3, hBMAL1 and hCry2 (where h is human) underwent circadian oscillation. Serum-stimulation also caused daily oscillations of hPER1 protein and the apparent molecular mass of hPER1 changed. Inhibitor studies indicated that the CKI (casein kinase I) family, including CKIepsilon and CKIdelta, phosphorylated hPER1 and increased the apparent molecular mass of hPER1. The inhibition of hPER1 phosphorylation by CKI-7 [ N -(2-aminoethyl)-5-chloro-isoquinoline-8-sulphonamide], a CKI inhibitor, disturbed hPER1 degradation, delayed the nuclear entry of hPER1 and allowed it to persist for longer in the nucleus. Furthermore, proteasome inhibitors specifically blocked hPER1 degradation. However leptomycin B, an inhibitor of nuclear export, did not alter the degradation state of hPER1 protein. These findings indicate that circadian hPER1 degradation through a proteasomal pathway can be regulated through phosphorylation by CKI, but not by subcellular localization.
Full Text
The Full Text of this article is available as a PDF (513.6 KB).
Selected References
These references are in PubMed. This may not be the complete list of references from this article.
- Akashi M., Nishida E. Involvement of the MAP kinase cascade in resetting of the mammalian circadian clock. Genes Dev. 2000 Mar 15;14(6):645–649. [PMC free article] [PubMed] [Google Scholar]
- Akashi Makoto, Tsuchiya Yoshiki, Yoshino Takao, Nishida Eisuke. Control of intracellular dynamics of mammalian period proteins by casein kinase I epsilon (CKIepsilon) and CKIdelta in cultured cells. Mol Cell Biol. 2002 Mar;22(6):1693–1703. doi: 10.1128/MCB.22.6.1693-1703.2002. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Akten Bikem, Jauch Eike, Genova Ginka K., Kim Eun Young, Edery Isaac, Raabe Thomas, Jackson F. Rob. A role for CK2 in the Drosophila circadian oscillator. Nat Neurosci. 2003 Mar;6(3):251–257. doi: 10.1038/nn1007. [DOI] [PubMed] [Google Scholar]
- Balsalobre A., Damiola F., Schibler U. A serum shock induces circadian gene expression in mammalian tissue culture cells. Cell. 1998 Jun 12;93(6):929–937. doi: 10.1016/s0092-8674(00)81199-x. [DOI] [PubMed] [Google Scholar]
- Balsalobre A., Marcacci L., Schibler U. Multiple signaling pathways elicit circadian gene expression in cultured Rat-1 fibroblasts. Curr Biol. 2000 Oct 19;10(20):1291–1294. doi: 10.1016/s0960-9822(00)00758-2. [DOI] [PubMed] [Google Scholar]
- Boyd S. D., Tsai K. Y., Jacks T. An intact HDM2 RING-finger domain is required for nuclear exclusion of p53. Nat Cell Biol. 2000 Sep;2(9):563–568. doi: 10.1038/35023500. [DOI] [PubMed] [Google Scholar]
- Brenneisen Peter, Wlaschek Meinhard, Schwamborn Edith, Schneider Lars-Alexander, Ma Wenjian, Sies Helmut, Scharffetter-Kochanek Karin. Activation of protein kinase CK2 is an early step in the ultraviolet B-mediated increase in interstitial collagenase (matrix metalloproteinase-1; MMP-1) and stromelysin-1 (MMP-3) protein levels in human dermal fibroblasts. Biochem J. 2002 Jul 1;365(Pt 1):31–40. doi: 10.1042/BJ20020110. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Camacho F., Cilio M., Guo Y., Virshup D. M., Patel K., Khorkova O., Styren S., Morse B., Yao Z., Keesler G. A. Human casein kinase Idelta phosphorylation of human circadian clock proteins period 1 and 2. FEBS Lett. 2001 Feb 2;489(2-3):159–165. doi: 10.1016/s0014-5793(00)02434-0. [DOI] [PubMed] [Google Scholar]
- Cheng H. L., Louis C. F. Functional effects of casein kinase I-catalyzed phosphorylation on lens cell-to-cell coupling. J Membr Biol. 2001 May 1;181(1):21–30. doi: 10.1007/s0023200100055. [DOI] [PubMed] [Google Scholar]
- Delaunay F., Thisse C., Marchand O., Laudet V., Thisse B. An inherited functional circadian clock in zebrafish embryos. Science. 2000 Jul 14;289(5477):297–300. doi: 10.1126/science.289.5477.297. [DOI] [PubMed] [Google Scholar]
- Dunlap J. Circadian rhythms. An end in the beginning. Science. 1998 Jun 5;280(5369):1548–1549. doi: 10.1126/science.280.5369.1548. [DOI] [PubMed] [Google Scholar]
- Ebisawa T., Uchiyama M., Kajimura N., Mishima K., Kamei Y., Katoh M., Watanabe T., Sekimoto M., Shibui K., Kim K. Association of structural polymorphisms in the human period3 gene with delayed sleep phase syndrome. EMBO Rep. 2001 Apr;2(4):342–346. doi: 10.1093/embo-reports/kve070. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Edery I., Zwiebel L. J., Dembinska M. E., Rosbash M. Temporal phosphorylation of the Drosophila period protein. Proc Natl Acad Sci U S A. 1994 Mar 15;91(6):2260–2264. doi: 10.1073/pnas.91.6.2260. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Eide Erik J., Vielhaber Erica L., Hinz William A., Virshup David M. The circadian regulatory proteins BMAL1 and cryptochromes are substrates of casein kinase Iepsilon. J Biol Chem. 2002 Mar 1;277(19):17248–17254. doi: 10.1074/jbc.M111466200. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Fish K. J., Cegielska A., Getman M. E., Landes G. M., Virshup D. M. Isolation and characterization of human casein kinase I epsilon (CKI), a novel member of the CKI gene family. J Biol Chem. 1995 Jun 23;270(25):14875–14883. doi: 10.1074/jbc.270.25.14875. [DOI] [PubMed] [Google Scholar]
- Geyer R. K., Yu Z. K., Maki C. G. The MDM2 RING-finger domain is required to promote p53 nuclear export. Nat Cell Biol. 2000 Sep;2(9):569–573. doi: 10.1038/35023507. [DOI] [PubMed] [Google Scholar]
- Ishida N., Kaneko M., Allada R. Biological clocks. Proc Natl Acad Sci U S A. 1999 Aug 3;96(16):8819–8820. doi: 10.1073/pnas.96.16.8819. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ishida N., Miyazaki K., Sakai T. Circadian rhythm biochemistry: from protein degradation to sleep and mating. Biochem Biophys Res Commun. 2001 Aug 10;286(1):1–5. doi: 10.1006/bbrc.2001.5207. [DOI] [PubMed] [Google Scholar]
- Keesler G. A., Camacho F., Guo Y., Virshup D., Mondadori C., Yao Z. Phosphorylation and destabilization of human period I clock protein by human casein kinase I epsilon. Neuroreport. 2000 Apr 7;11(5):951–955. doi: 10.1097/00001756-200004070-00011. [DOI] [PubMed] [Google Scholar]
- Kikuno Reiko, Nagase Takahiro, Waki Mina, Ohara Osamu. HUGE: a database for human large proteins identified in the Kazusa cDNA sequencing project. Nucleic Acids Res. 2002 Jan 1;30(1):166–168. doi: 10.1093/nar/30.1.166. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kloss B., Price J. L., Saez L., Blau J., Rothenfluh A., Wesley C. S., Young M. W. The Drosophila clock gene double-time encodes a protein closely related to human casein kinase Iepsilon. Cell. 1998 Jul 10;94(1):97–107. doi: 10.1016/s0092-8674(00)81225-8. [DOI] [PubMed] [Google Scholar]
- Lau L. F., Nathans D. Expression of a set of growth-related immediate early genes in BALB/c 3T3 cells: coordinate regulation with c-fos or c-myc. Proc Natl Acad Sci U S A. 1987 Mar;84(5):1182–1186. doi: 10.1073/pnas.84.5.1182. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Lee C., Etchegaray J. P., Cagampang F. R., Loudon A. S., Reppert S. M. Posttranslational mechanisms regulate the mammalian circadian clock. Cell. 2001 Dec 28;107(7):855–867. doi: 10.1016/s0092-8674(01)00610-9. [DOI] [PubMed] [Google Scholar]
- Lenk U., Sommer T. Ubiquitin-mediated proteolysis of a short-lived regulatory protein depends on its cellular localization. J Biol Chem. 2000 Dec 15;275(50):39403–39410. doi: 10.1074/jbc.M006949200. [DOI] [PubMed] [Google Scholar]
- Lin F. J., Song W., Meyer-Bernstein E., Naidoo N., Sehgal A. Photic signaling by cryptochrome in the Drosophila circadian system. Mol Cell Biol. 2001 Nov;21(21):7287–7294. doi: 10.1128/MCB.21.21.7287-7294.2001. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Lin Jui-Ming, Kilman Valerie L., Keegan Kevin, Paddock Brie, Emery-Le Myai, Rosbash Michael, Allada Ravi. A role for casein kinase 2alpha in the Drosophila circadian clock. Nature. 2002 Dec 19;420(6917):816–820. doi: 10.1038/nature01235. [DOI] [PubMed] [Google Scholar]
- Lowrey P. L., Shimomura K., Antoch M. P., Yamazaki S., Zemenides P. D., Ralph M. R., Menaker M., Takahashi J. S. Positional syntenic cloning and functional characterization of the mammalian circadian mutation tau. Science. 2000 Apr 21;288(5465):483–492. doi: 10.1126/science.288.5465.483. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Martinek S., Inonog S., Manoukian A. S., Young M. W. A role for the segment polarity gene shaggy/GSK-3 in the Drosophila circadian clock. Cell. 2001 Jun 15;105(6):769–779. doi: 10.1016/s0092-8674(01)00383-x. [DOI] [PubMed] [Google Scholar]
- McNamara P., Seo S. B., Rudic R. D., Sehgal A., Chakravarti D., FitzGerald G. A. Regulation of CLOCK and MOP4 by nuclear hormone receptors in the vasculature: a humoral mechanism to reset a peripheral clock. Cell. 2001 Jun 29;105(7):877–889. doi: 10.1016/s0092-8674(01)00401-9. [DOI] [PubMed] [Google Scholar]
- Miyazaki K., Mesaki M., Ishida N. Nuclear entry mechanism of rat PER2 (rPER2): role of rPER2 in nuclear localization of CRY protein. Mol Cell Biol. 2001 Oct;21(19):6651–6659. doi: 10.1128/MCB.21.19.6651-6659.2001. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Nagase T., Ishikawa K., Nakajima D., Ohira M., Seki N., Miyajima N., Tanaka A., Kotani H., Nomura N., Ohara O. Prediction of the coding sequences of unidentified human genes. VII. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro. DNA Res. 1997 Apr 28;4(2):141–150. doi: 10.1093/dnares/4.2.141. [DOI] [PubMed] [Google Scholar]
- Nagase T., Ishikawa K., Suyama M., Kikuno R., Miyajima N., Tanaka A., Kotani H., Nomura N., Ohara O. Prediction of the coding sequences of unidentified human genes. XI. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. DNA Res. 1998 Oct 30;5(5):277–286. doi: 10.1093/dnares/5.5.277. [DOI] [PubMed] [Google Scholar]
- Naidoo N., Song W., Hunter-Ensor M., Sehgal A. A role for the proteasome in the light response of the timeless clock protein. Science. 1999 Sep 10;285(5434):1737–1741. doi: 10.1126/science.285.5434.1737. [DOI] [PubMed] [Google Scholar]
- Nonaka H., Emoto N., Ikeda K., Fukuya H., Rohman M. S., Raharjo S. B., Yagita K., Okamura H., Yokoyama M. Angiotensin II induces circadian gene expression of clock genes in cultured vascular smooth muscle cells. Circulation. 2001 Oct 9;104(15):1746–1748. doi: 10.1161/hc4001.098048. [DOI] [PubMed] [Google Scholar]
- Ohara O., Nagase T., Ishikawa K., Nakajima D., Ohira M., Seki N., Nomura N. Construction and characterization of human brain cDNA libraries suitable for analysis of cDNA clones encoding relatively large proteins. DNA Res. 1997 Feb 28;4(1):53–59. doi: 10.1093/dnares/4.1.53. [DOI] [PubMed] [Google Scholar]
- Oishi K., Sakamoto K., Okada T., Nagase T., Ishida N. Antiphase circadian expression between BMAL1 and period homologue mRNA in the suprachiasmatic nucleus and peripheral tissues of rats. Biochem Biophys Res Commun. 1998 Dec 18;253(2):199–203. doi: 10.1006/bbrc.1998.9779. [DOI] [PubMed] [Google Scholar]
- Okamura H., Miyake S., Sumi Y., Yamaguchi S., Yasui A., Muijtjens M., Hoeijmakers J. H., van der Horst G. T. Photic induction of mPer1 and mPer2 in cry-deficient mice lacking a biological clock. Science. 1999 Dec 24;286(5449):2531–2534. doi: 10.1126/science.286.5449.2531. [DOI] [PubMed] [Google Scholar]
- Price J. L., Blau J., Rothenfluh A., Abodeely M., Kloss B., Young M. W. double-time is a novel Drosophila clock gene that regulates PERIOD protein accumulation. Cell. 1998 Jul 10;94(1):83–95. doi: 10.1016/s0092-8674(00)81224-6. [DOI] [PubMed] [Google Scholar]
- Reits E. A., Benham A. M., Plougastel B., Neefjes J., Trowsdale J. Dynamics of proteasome distribution in living cells. EMBO J. 1997 Oct 15;16(20):6087–6094. doi: 10.1093/emboj/16.20.6087. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ruzzene Maria, Penzo Daniele, Pinna Lorenzo A. Protein kinase CK2 inhibitor 4,5,6,7-tetrabromobenzotriazole (TBB) induces apoptosis and caspase-dependent degradation of haematopoietic lineage cell-specific protein 1 (HS1) in Jurkat cells. Biochem J. 2002 May 15;364(Pt 1):41–47. doi: 10.1042/bj3640041. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Takano A., Shimizu K., Kani S., Buijs R. M., Okada M., Nagai K. Cloning and characterization of rat casein kinase 1epsilon. FEBS Lett. 2000 Jul 14;477(1-2):106–112. doi: 10.1016/s0014-5793(00)01755-5. [DOI] [PubMed] [Google Scholar]
- Takumi T., Matsubara C., Shigeyoshi Y., Taguchi K., Yagita K., Maebayashi Y., Sakakida Y., Okumura K., Takashima N., Okamura H. A new mammalian period gene predominantly expressed in the suprachiasmatic nucleus. Genes Cells. 1998 Mar;3(3):167–176. doi: 10.1046/j.1365-2443.1998.00178.x. [DOI] [PubMed] [Google Scholar]
- Takumi T., Taguchi K., Miyake S., Sakakida Y., Takashima N., Matsubara C., Maebayashi Y., Okumura K., Takekida S., Yamamoto S. A light-independent oscillatory gene mPer3 in mouse SCN and OVLT. EMBO J. 1998 Aug 17;17(16):4753–4759. doi: 10.1093/emboj/17.16.4753. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Tei H., Okamura H., Shigeyoshi Y., Fukuhara C., Ozawa R., Hirose M., Sakaki Y. Circadian oscillation of a mammalian homologue of the Drosophila period gene. Nature. 1997 Oct 2;389(6650):512–516. doi: 10.1038/39086. [DOI] [PubMed] [Google Scholar]
- Toh K. L., Jones C. R., He Y., Eide E. J., Hinz W. A., Virshup D. M., Ptácek L. J., Fu Y. H. An hPer2 phosphorylation site mutation in familial advanced sleep phase syndrome. Science. 2001 Feb 9;291(5506):1040–1043. doi: 10.1126/science.1057499. [DOI] [PubMed] [Google Scholar]
- Vielhaber E. L., Duricka D., Ullman K. S., Virshup D. M. Nuclear export of mammalian PERIOD proteins. J Biol Chem. 2001 Oct 8;276(49):45921–45927. doi: 10.1074/jbc.M107726200. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Vielhaber E., Eide E., Rivers A., Gao Z. H., Virshup D. M. Nuclear entry of the circadian regulator mPER1 is controlled by mammalian casein kinase I epsilon. Mol Cell Biol. 2000 Jul;20(13):4888–4899. doi: 10.1128/mcb.20.13.4888-4899.2000. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Yagita K., Tamanini F., van Der Horst G. T., Okamura H. Molecular mechanisms of the biological clock in cultured fibroblasts. Science. 2001 Apr 13;292(5515):278–281. doi: 10.1126/science.1059542. [DOI] [PubMed] [Google Scholar]
- Yagita Kazuhiro, Tamanini Filippo, Yasuda Maya, Hoeijmakers Jan H. J., van der Horst Gijsbertus T. J., Okamura Hitoshi. Nucleocytoplasmic shuttling and mCRY-dependent inhibition of ubiquitylation of the mPER2 clock protein. EMBO J. 2002 Mar 15;21(6):1301–1314. doi: 10.1093/emboj/21.6.1301. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Yang Yuhong, Cheng Ping, Liu Yi. Regulation of the Neurospora circadian clock by casein kinase II. Genes Dev. 2002 Apr 15;16(8):994–1006. doi: 10.1101/gad.965102. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Yang Z., Sehgal A. Role of molecular oscillations in generating behavioral rhythms in Drosophila. Neuron. 2001 Feb;29(2):453–467. doi: 10.1016/s0896-6273(01)00218-5. [DOI] [PubMed] [Google Scholar]
- Yoshimura T., Suzuki Y., Makino E., Suzuki T., Kuroiwa A., Matsuda Y., Namikawa T., Ebihara S. Molecular analysis of avian circadian clock genes. Brain Res Mol Brain Res. 2000 May 31;78(1-2):207–215. doi: 10.1016/s0169-328x(00)00091-7. [DOI] [PubMed] [Google Scholar]
- Zylka M. J., Shearman L. P., Weaver D. R., Reppert S. M. Three period homologs in mammals: differential light responses in the suprachiasmatic circadian clock and oscillating transcripts outside of brain. Neuron. 1998 Jun;20(6):1103–1110. doi: 10.1016/s0896-6273(00)80492-4. [DOI] [PubMed] [Google Scholar]