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. 1993 Dec;65(6):2578–2585. doi: 10.1016/S0006-3495(93)81295-5

Removal of the transducer protein from sensory rhodopsin I exposes sites of proton release and uptake during the receptor photocycle.

K D Olson 1, J L Spudich 1
PMCID: PMC1225999  PMID: 8312493

Abstract

The phototaxis receptor sensory rhodopsin-I (SR-I) was genetically truncated in the COOH terminus which leads to overexpression in Halobacterium salinarium and was expressed in the presence and absence of its transducer, HtrI. Pyranine (8-hydroxyl-1,3,6-pyrene-trisulfonate) was used as a pH probe to show that proton release to the bulk phase results from the SR-I587 to S373 photoconversion, but only in the absence of transducer. The stoichiometry is 1 proton/S373 molecule formed. When SR-I is overexpressed in the presence of HtrI, the kinetics of the thermal return of S373 to SR-I587 is biphasic. A kinetic dissection indicates that overexpressed SR-I is present in two pools: one pool which generates an SR-I molecule possessing a normal (i.e., transducer-interacting) pH-independent rate of S373 decay, and a second pool which shows the pH-dependent kinetics of transducer-free S373 decay. The truncated SR-I receptor functions normally based on the following criteria: (i) Truncated SR-I restores phototaxis (attractant and repellent responses) when expressed in a strain lacking native SR-I, but containing HtrI. (ii) The absorption spectrum and the flash-induced absorption difference spectrum are indistinguishable from those of native SR-I. (iii) The rate of decay of S373 is pH-dependent in the absence of HtrI but not in the presence of HtrI. The data presented here indicate that a proton-conducting path exists between the protonated Schiff base nitrogen and the extramembranous environment in the transducer-free receptor, and transducer binding blocks this path.

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Selected References

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  1. Bayley H., Huang K. S., Radhakrishnan R., Ross A. H., Takagaki Y., Khorana H. G. Site of attachment of retinal in bacteriorhodopsin. Proc Natl Acad Sci U S A. 1981 Apr;78(4):2225–2229. doi: 10.1073/pnas.78.4.2225. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. Blanck A., Oesterhelt D., Ferrando E., Schegk E. S., Lottspeich F. Primary structure of sensory rhodopsin I, a prokaryotic photoreceptor. EMBO J. 1989 Dec 20;8(13):3963–3971. doi: 10.1002/j.1460-2075.1989.tb08579.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. Blaurock A. E., Stoeckenius W., Oesterhelt D., Scherfhof G. L. Structure of the cell envelope of Halobacterium halobium. J Cell Biol. 1976 Oct;71(1):1–22. doi: 10.1083/jcb.71.1.1. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Bogomolni R. A., Spudich J. L. Identification of a third rhodopsin-like pigment in phototactic Halobacterium halobium. Proc Natl Acad Sci U S A. 1982 Oct;79(20):6250–6254. doi: 10.1073/pnas.79.20.6250. [DOI] [PMC free article] [PubMed] [Google Scholar]
  5. Bogomolni R. A., Spudich J. L. The photochemical reactions of bacterial sensory rhodopsin-I. Flash photolysis study in the one microsecond to eight second time window. Biophys J. 1987 Dec;52(6):1071–1075. doi: 10.1016/S0006-3495(87)83301-5. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. Butt H. J., Fendler K., Bamberg E., Tittor J., Oesterhelt D. Aspartic acids 96 and 85 play a central role in the function of bacteriorhodopsin as a proton pump. EMBO J. 1989 Jun;8(6):1657–1663. doi: 10.1002/j.1460-2075.1989.tb03556.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Ehrlich B. E., Schen C. R., Spudich J. L. Bacterial rhodopsins monitored with fluorescent dyes in vesicles and in vivo. J Membr Biol. 1984;82(1):89–94. doi: 10.1007/BF01870735. [DOI] [PubMed] [Google Scholar]
  8. Ferrando-May E., Brustmann B., Oesterhelt D. A C-terminal truncation results in high-level expression of the functional photoreceptor sensory rhodopsin I in the archaeon Halobacterium salinarium. Mol Microbiol. 1993 Sep;9(5):943–953. doi: 10.1111/j.1365-2958.1993.tb01224.x. [DOI] [PubMed] [Google Scholar]
  9. Ferrando-May E., Krah M., Marwan W., Oesterhelt D. The methyl-accepting transducer protein HtrI is functionally associated with the photoreceptor sensory rhodopsin I in the archaeon Halobacterium salinarium. EMBO J. 1993 Aug;12(8):2999–3005. doi: 10.1002/j.1460-2075.1993.tb05968.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Fodor S. P., Gebhard R., Lugtenburg J., Bogomolni R. A., Mathies R. A. Structure of the retinal chromophore in sensory rhodopsin I from resonance Raman spectroscopy. J Biol Chem. 1989 Nov 5;264(31):18280–18283. [PubMed] [Google Scholar]
  11. Henderson R., Baldwin J. M., Ceska T. A., Zemlin F., Beckmann E., Downing K. H. Model for the structure of bacteriorhodopsin based on high-resolution electron cryo-microscopy. J Mol Biol. 1990 Jun 20;213(4):899–929. doi: 10.1016/S0022-2836(05)80271-2. [DOI] [PubMed] [Google Scholar]
  12. Katre N. V., Wolber P. K., Stoeckenius W., Stroud R. M. Attachment site(s) of retinal in bacteriorhodopsin. Proc Natl Acad Sci U S A. 1981 Jul;78(7):4068–4072. doi: 10.1073/pnas.78.7.4068. [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. Krebs M. P., Spudich E. N., Khorana H. G., Spudich J. L. Synthesis of a gene for sensory rhodopsin I and its functional expression in Halobacterium halobium. Proc Natl Acad Sci U S A. 1993 Apr 15;90(8):3486–3490. doi: 10.1073/pnas.90.8.3486. [DOI] [PMC free article] [PubMed] [Google Scholar]
  14. Mogi T., Stern L. J., Marti T., Chao B. H., Khorana H. G. Aspartic acid substitutions affect proton translocation by bacteriorhodopsin. Proc Natl Acad Sci U S A. 1988 Jun;85(12):4148–4152. doi: 10.1073/pnas.85.12.4148. [DOI] [PMC free article] [PubMed] [Google Scholar]
  15. Needleman R., Chang M., Ni B., Váró G., Fornés J., White S. H., Lanyi J. K. Properties of Asp212----Asn bacteriorhodopsin suggest that Asp212 and Asp85 both participate in a counterion and proton acceptor complex near the Schiff base. J Biol Chem. 1991 Jun 25;266(18):11478–11484. [PubMed] [Google Scholar]
  16. Oesterhelt D., Stoeckenius W. Functions of a new photoreceptor membrane. Proc Natl Acad Sci U S A. 1973 Oct;70(10):2853–2857. doi: 10.1073/pnas.70.10.2853. [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. Olson K. D., Deval P., Spudich J. L. Absorption and photochemistry of sensory rhodopsin--I: pH effects. Photochem Photobiol. 1992 Dec;56(6):1181–1187. doi: 10.1111/j.1751-1097.1992.tb09743.x. [DOI] [PubMed] [Google Scholar]
  18. Otto H., Marti T., Holz M., Mogi T., Stern L. J., Engel F., Khorana H. G., Heyn M. P. Substitution of amino acids Asp-85, Asp-212, and Arg-82 in bacteriorhodopsin affects the proton release phase of the pump and the pK of the Schiff base. Proc Natl Acad Sci U S A. 1990 Feb;87(3):1018–1022. doi: 10.1073/pnas.87.3.1018. [DOI] [PMC free article] [PubMed] [Google Scholar]
  19. Schobert B., Lanyi J. K. Halorhodopsin is a light-driven chloride pump. J Biol Chem. 1982 Sep 10;257(17):10306–10313. [PubMed] [Google Scholar]
  20. Spudich E. N., Hasselbacher C. A., Spudich J. L. Methyl-accepting protein associated with bacterial sensory rhodopsin I. J Bacteriol. 1988 Sep;170(9):4280–4285. doi: 10.1128/jb.170.9.4280-4285.1988. [DOI] [PMC free article] [PubMed] [Google Scholar]
  21. Spudich E. N., Spudich J. L. Control of transmembrane ion fluxes to select halorhodopsin-deficient and other energy-transduction mutants of Halobacterium halobium. Proc Natl Acad Sci U S A. 1982 Jul;79(14):4308–4312. doi: 10.1073/pnas.79.14.4308. [DOI] [PMC free article] [PubMed] [Google Scholar]
  22. Spudich E. N., Spudich J. L. The photochemical reactions of sensory rhodopsin I are altered by its transducer. J Biol Chem. 1993 Aug 5;268(22):16095–16097. [PubMed] [Google Scholar]
  23. Spudich E. N., Sundberg S. A., Manor D., Spudich J. L. Properties of a second sensory receptor protein in Halobacterium halobium phototaxis. Proteins. 1986 Nov;1(3):239–246. doi: 10.1002/prot.340010306. [DOI] [PubMed] [Google Scholar]
  24. Spudich J. L., Bogomolni R. A. Mechanism of colour discrimination by a bacterial sensory rhodopsin. Nature. 1984 Dec 6;312(5994):509–513. doi: 10.1038/312509a0. [DOI] [PMC free article] [PubMed] [Google Scholar]
  25. Szundi I., Stoeckenius W. Effect of lipid surface charges on the purple-to-blue transition of bacteriorhodopsin. Proc Natl Acad Sci U S A. 1987 Jun;84(11):3681–3684. doi: 10.1073/pnas.84.11.3681. [DOI] [PMC free article] [PubMed] [Google Scholar]
  26. Yan B., Nakanishi K., Spudich J. L. Mechanism of activation of sensory rhodopsin I: evidence for a steric trigger. Proc Natl Acad Sci U S A. 1991 Nov 1;88(21):9412–9416. doi: 10.1073/pnas.88.21.9412. [DOI] [PMC free article] [PubMed] [Google Scholar]
  27. Yan B., Spudich J. L. Evidence that the repellent receptor form of sensory rhodopsin I is an attractant signaling state. Photochem Photobiol. 1991 Dec;54(6):1023–1026. doi: 10.1111/j.1751-1097.1991.tb02125.x. [DOI] [PubMed] [Google Scholar]
  28. Yao V. J., Spudich J. L. Primary structure of an archaebacterial transducer, a methyl-accepting protein associated with sensory rhodopsin I. Proc Natl Acad Sci U S A. 1992 Dec 15;89(24):11915–11919. doi: 10.1073/pnas.89.24.11915. [DOI] [PMC free article] [PubMed] [Google Scholar]

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