Abstract
Optical third harmonic generation (THG) has been observed for the first time from DNA films. The THG signal is observed from NaDNA films exposed to relative humidities (RHs) between 0% and 98%. A strong enhancement (approximately 5x) of the THG signal from NaDNA is observed at 84% RH; no enhancement is observed for RbDNA. The most likely mechanism for such an enhancement is an increased coherence length. A model calculation using estimates of the refractive indices at both the fundamental and third harmonic frequencies supports this interpretation. The observed THG signal has the same polarization as the incident (fundamental) light. For the A conformation, the THG signal polarized perpendicular to the helical axis is approximately twice as strong as the signal polarized parallel to the helical axis. No such anisotropy is observed for either the disordered conformation (below about 50% RH) or the B conformation (above 92% RH).
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Selected References
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- Beger R, Prohofsky EW. Method for calculating the effects of a dynamic entity interacting with poly(dT-dA) Phys Rev A. 1991 Sep 15;44(6):3997–4004. doi: 10.1103/physreva.44.3997. [DOI] [PubMed] [Google Scholar]
- Freund I., Deutsch M., Sprecher A. Connective tissue polarity. Optical second-harmonic microscopy, crossed-beam summation, and small-angle scattering in rat-tail tendon. Biophys J. 1986 Oct;50(4):693–712. doi: 10.1016/S0006-3495(86)83510-X. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Lavalle N., Lee S. A., Rupprecht A. Counterion effects on the physical properties and the A to B transition of calf-thymus DNA films. Biopolymers. 1990;30(9-10):877–887. doi: 10.1002/bip.360300903. [DOI] [PubMed] [Google Scholar]
- Lavalle N, Lee SA, Flox LS. Lattice-dynamical model of crystalline DNA: Intermolecular bonds and the A to B transition. Phys Rev A. 1991 Mar 15;43(6):3126–3130. doi: 10.1103/physreva.43.3126. [DOI] [PubMed] [Google Scholar]
- Lee S. A., Lindsay S. M., Powell J. W., Weidlich T., Tao N. J., Lewen G. D. A Brillouin scattering study of the hydration of Li- and Na-DNA films. Biopolymers. 1987 Oct;26(10):1637–1665. doi: 10.1002/bip.360261002. [DOI] [PubMed] [Google Scholar]
- Lee SA, Sclavi B, Powell JW, Williamson W, 3rd, Rupprecht A. Vibrational dynamics of wet-spun films of the NaDNA-netropsin complex: A Raman and infrared study. Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics. 1993 Sep;48(3):2240–2245. doi: 10.1103/physreve.48.2240. [DOI] [PubMed] [Google Scholar]
- Lindsay S. M., Lee S. A., Powell J. W., Weidlich T., DeMarco C., Lewen G. D., Tao N. J., Rupprecht A. The origin of the A to B transition in DNA fibers and films. Biopolymers. 1988 Jun;27(6):1015–1043. doi: 10.1002/bip.360270610. [DOI] [PubMed] [Google Scholar]
- Muto V., Halding J., Christiansen P. L., Scott A. C. Solitons in DNA. J Biomol Struct Dyn. 1988 Feb;5(4):873–894. doi: 10.1080/07391102.1988.10506432. [DOI] [PubMed] [Google Scholar]
- Parry D. A., Craig A. S. Quantitative electron microscope observations of the collagen fibrils in rat-tail tendon. Biopolymers. 1977 May;16(5):1015–1031. doi: 10.1002/bip.1977.360160506. [DOI] [PubMed] [Google Scholar]
- Powell JW, Edwards GS, Genzel L, Kremer F, Wittlin A, Kubasek W, Peticolas W. Investigation of far-infrared vibrational modes in polynucleotides. Phys Rev A Gen Phys. 1987 May 1;35(9):3929–3939. doi: 10.1103/physreva.35.3929. [DOI] [PubMed] [Google Scholar]
- Roth S., Freund I. Optical second-harmonic scattering in rat-tail tendon. Biopolymers. 1981 Jun;20(6):1271–1290. doi: 10.1002/bip.1981.360200613. [DOI] [PubMed] [Google Scholar]
- Rupprecht A. A wet spinning apparatus and auxiliary equipment suitable for preparing samples of oriented DNA. Biotechnol Bioeng. 1970 Jan;12(1):93–121. doi: 10.1002/bit.260120109. [DOI] [PubMed] [Google Scholar]
- Rupprecht A., Forslind B. Variation of electrolyte content in wet-spun lithium- and sodium-DNA. Biochim Biophys Acta. 1970 Apr 15;204(2):304–316. doi: 10.1016/0005-2787(70)90148-6. [DOI] [PubMed] [Google Scholar]
- Techera M, Daemen LL, Prohofsky EW. Nonlinear model of the DNA molecule. Phys Rev A Gen Phys. 1989 Dec 1;40(11):6636–6642. doi: 10.1103/physreva.40.6636. [DOI] [PubMed] [Google Scholar]
- Weidlich T., Lindsay S. M., Rupprecht A. The optical properties of Li- and Na-DNA films. Biopolymers. 1987 Mar;26(3):439–453. doi: 10.1002/bip.360260310. [DOI] [PubMed] [Google Scholar]
- Weidlich T, Lindsay SM, Rupprecht A. Counterion effects on the structure and dynamics of solid DNA. Phys Rev Lett. 1988 Oct 3;61(14):1674–1677. doi: 10.1103/PhysRevLett.61.1674. [DOI] [PubMed] [Google Scholar]
