Skip to main content
PLOS One logoLink to PLOS One
. 2025 Aug 11;20(8):e0328277. doi: 10.1371/journal.pone.0328277

Comparison and selection of light-emitting diodes (LEDs) for disease assays on plant pathogenic viruses and bacteria in greenhouses

Anne K J Giesbers 1,*, Barendinus J A van Doorn 1, Joanieke van Oorspronk 1, Carla Oplaat 1, Christel de Krom 1, Maria Bergsma-Vlami 1, Annelien Roenhorst 1
Editor: Karthik Kannan2
PMCID: PMC12338770  PMID: 40788906

Abstract

Supplemental lighting in greenhouses has traditionally been dominated by high-pressure sodium (HPS) lights. However, a shift towards light-emitting diode (LED) technology is gaining momentum due to its energy efficiency, customizable light spectra, and adjustable light intensity, which together allow for more precise control over plant development. In plant pathogen diagnostics, where symptom expression is essential, HPS lights have typically been used in greenhouse settings. Since LEDs are generally optimized to promote plant growth and quality, they may affect plant physiology, including responses to pathogens. To investigate how different lighting sources affect the expression of viral and bacterial disease symptoms, two types of LEDs with different spectra were compared with the traditionally used HPS lights. LEDs with a “daylight” spectrum, featuring pronounced blue and red peaks resulted in poor virus symptom expression, though the expression of bacterial symptoms was less affected. In contrast, LEDs with a broad spectrum – characterized by a modest blue peak, a prominent red peak, and a small far-red peak – elicited virus and bacterial symptoms similar to those observed under HPS lights, when adjusted at equal light intensity level. This study provides insights into symptom development in plants inoculated with viruses and bacteria under various lighting conditions, highlighting the influence of light intensity and spectrum. Based on the results of this comparative study, “broad spectrum with far-red” LEDs were identified that are suitable for disease assays on plant pathogenic viruses and bacteria.

Introduction

Light-emitting diodes (LEDs) are increasingly adopted as an energy-efficient alternative to high-pressure sodium (HPS) lights for supplemental illumination in greenhouses. Whereas HPS lights generate high levels of radiant heat, LEDs are far more efficient at converting electricity into photosynthetically active radiation, thereby reducing energy usage and associated costs [1,2]. However, since LEDs generate less heat, additional energy is often needed to maintain optimal greenhouse temperatures for plant growth, particularly in colder periods. As a result, in comparison to HPS lights additional supplementary heating is required, especially during winter. However, it is generally more efficient to manage heating and lighting separately, allowing for precise control over each factor to support plant growth and reduce overall energy consumption [3]. The total energy savings achieved by a transition from HPS to LED technology in greenhouses has been estimated to be in the range of 10–25%, accounting for both lighting and heating needs [2]. Consequently, adopting LED technology can play a significant role in advancing the global energy transition and enhancing the sustainability of greenhouse horticulture.

Another advantage of LEDs is their relatively long lifespan. Modern horticultural LEDs are designed to maintain at least 90% of their initial light output for an average lifespan of 45 000 hours [4]. In comparison, commonly used HPS lights, such as the MASTER SON-T PIA Plus, achieve the same performance for only 16 000 hours [5]. Beyond longevity, LEDs offer customizable light spectra and intensity, enabling optimization of plant development, quality and metabolism [6]. In contrast, HPS lights have a limited spectrum and minimal adaptability. Moreover, as the horticultural industry increasingly shifts from HPS to LED technology, the availability of HPS lights is declining and is prompting users to explore alternatives. This trend is reinforced by Regulation (EU) 2017/852 [7] which mandates the phase-out of certain mercury containing products, including HPS lights, within the European Union, unless specific exemption criteria are met.

LEDs used in horticulture are optimized to enhance plant growth and quality while minimizing energy consumption by employing targeted wavelengths, particularly (far-)red and/or blue light. These wavelengths, along with light intensity, have been shown to influence the virulence of various plant pathogens, including bacteria, fungi and viruses [816]. However, in plant pathology and diagnostics, the primary objective is to study, detect or identify pathogens. Consequently, the lighting conditions must be tailored to support pathogen virulence and enhance the visibility of disease symptoms rather than promoting plant growth. For virus detection, bioassays involve inoculating susceptible test plants with sap from infected plant material. Bacterial identification typically involves a pathogenicity test, where plants are inoculated with cells from a pure bacterial culture suspected to be the etiological agent of the disease [17]. To simplify terminology, the term disease assay is used here to encompass both virus detection bioassays and bacterial pathogenicity tests. Fine-tuning of the light spectrum and intensity may enhance the expression of pathogen symptoms, thereby increasing the accuracy and effectiveness of plant pathogen diagnostics.

This study aimed to identify suitable LEDs for plant virus and bacteria disease assays, facilitating the transition from HPS to LED technology in plant pathogen diagnostics. Two types of LEDs were evaluated to assess the impact of different light spectra on assay outcomes. A variety of test plants, viruses and bacteria were included to capture a wide range of symptoms. The comparison demonstrated that “broad spectrum with far-red” LEDs could serve as a viable alternative to HPS lights for disease assays of plant viruses and bacteria.

Materials and methods

Greenhouse set-up

Two comparable test compartments were used for comparison studies, one equipped with LEDs and the other with HPS lights. The sides were covered with opaque white plastic to prevent light transmission between compartments. Experiments were conducted during the winter season to minimize the influence of natural daylight. Supplemental lighting was programmed to maintain a 14-hour photoperiod. Greenhouse settings included a night-day temperature of 18–25 °C and a relative humidity (RH) of 70%, except for Ralstonia spp. assays with a night-day temperature of 26–30°C and >80% RH.

Light specifications

HPS lights (Philips Master SON-T PIA Plus, 400 W) were compared with two types of LEDs: “daylight spectrum” LEDs (HORTILED top 120v19, 336 W, dimmable), and “broad spectrum with far-red” LEDs (Fluence VYPR 3p R6 + FR, 600 W, dimmable). After the first experiment (B1), the LEDs were dimmed to match the levels of the HPS lights. Light intensity was measured at multiple points within each compartment at plant level using a LI-COR Quantum/Radiometer/ Photometer model LI-189 in the absence of daylight. Spatial variations in light intensity were observed with ranges indicated in Tables 1 and 2, with lower intensities particularly at the compartment edges. To control for the potential effect of these spatial variations, plant-pathogen combinations were placed in similar positions across both test compartments. The light spectra for each system were measured without daylight, using an Asensetek ALP-01 spectrometer. Compartments were equipped with 8 LED or 10 HPS fixtures ensuring comparable light homogeneity.

Table 1. Greenhouse lighting conditions, and virus-plant combinations per experiment.

Experiment V1a Experiment V1b Experiment V2
LED spectrum Daylight Daylight Broad with far-red
Approximate light intensity (µmol/m2/s) LED: 60–78
HPS: 45–60
LED: 52–61
HPS: 45–63
LED: 36–64
HPS: 43–70
Symptom observation period Week 49 2021-week 4 2022 Week 8–12 2022 Week 48 2022-week 2 2023
Virus1 Isolate Test plants2
TRSV 9702383 C. quinoa
C. sativus
N. benthamiana
N. occidentalis
N. tabacum
N. benthamiana
N. occidentalis
N. tabacum
C. quinoa
C. sativus
N. benthamiana
N. occidentalis
N. tabacum
TSWV 21007721 D. stramonium
N. benthamiana
N. glutinosa
N. occidentalis
N. tabacum
D. stramonium
N. benthamiana
N. glutinosa
N. occidentalis
N. tabacum
PhCMoV 33226137 N. benthamiana
N. occidentalis
N. benthamiana
N. occidentalis
N. benthamiana
N. occidentalis

1TRSV: tobacco ringspot virus (Nepovirus nicotianae), TSWV: tomato spotted wilt virus (Orthotospovirus tomatomaculae), PhCMoV: Physostegia chlorotic mottle virus (Alphanucleorhabdovirus physostegiae).

2Full names: Chenopodium quinoa, Cucumis sativus “Chinese Slangen”, Datura stramonium, Nicotiana benthamiana, Nicotiana glutinosa, Nicotiana occidentalis “P1”, Nicotiana tabacum “White Burley”.

Table 2. Greenhouse lighting conditions, and bacteria-plant combinations per experiment.

Experiment B1 Experiment B2 Experiment B3
LED spectrum Daylight Daylight Broad with far-red
Approximate light intensity (µmol/m2/s) LED: 75–131 HPS: 43–71 LED: 60–78
HPS: 45–60
LED: 36–64
HPS: 43–70
Symptom observation period Week 51 2020 – week 8 2021 Week 51 2021-week 6 2022 Week 49 2022-week 6 2023
Bacteria1 Isolate Test plants2
R. solanacearum ph II (10) PD2762
PD74653
PD74663
S. lycopersicum (1) S. lycopersicum (2) S. lycopersicum (2)
R. pseudosolanacearum ph I (10) PD7123 S. lycopersicum (1) S. lycopersicum (2) S. lycopersicum (2)
C. sepedonicus (10) PD406
PD7861
S. melongena (2) S. melongena (2) S. melongena (2)
X. citri pv. aurantifolii (2)
X. citri pv. citri (2)
PD6315
PD990
C. sinensis (1)
C. calamondin (1)
P. syringae pv. syringae (2) PD 760 N. tabacum (1) N. tabacum (1)

1Full names: Clavibacter sepedonicus, Pseudomonas syringae pv. syringae, Ralstonia pseudosolanacearum phylotype I, Ralstonia solanacearum phylotype II, Xanthomonas citri pv. aurantifolii, Xanthomonas citri pv. citri; number of biological replicates (inoculated/infiltrated plants/leaves) indicated in brackets.

2Full names: Citrus calamondin “Oriana”, Citrus sinensis “Aurancio”, Nicotiana tabacum “White Burley”, Solanum lycopersium “Money Maker”, Solanum melongena “Black Beauty”; number of technical replicates indicated in brackets.

3Isolates PD7465 and PD7466 were not included in experiment B3.

Plant cultivation

All plants were grown in fertilized compost soil. For virus bioassays, seeds of various test plant species (Table 1) were initially sown in a greenhouse compartment under HPS lights. After two weeks, the seedlings were transplanted into 11 cm diameter pots within the respective test compartments, while Cucumis sativus seeds were sown directly into the 11 cm pots. For bacterial pathogenicity tests, seeds were sown directly in the test compartments (Table 2). After two weeks, Solanum lycopersicum and S. melongena were transplanted into trays (10 plants/tray) and Nicotiana tabacum were transplanted into 11 cm pots. Mature citrus plants (C. sinensis and C. calamondin) that had been growing for approximately 18 months under HPS lights at a night-day temperature of 18–22 °C and 70% RH were pruned. After pruning, the citrus plants were transferred to the test compartments to allow the development of young, fully-expanded leaves for a detached leaf assay.

Virus detection bioassays

Virus–plant combinations for each experiment are detailed in Table 1. For each virus, four plants per species per compartment were mechanically inoculated [18] with the same inoculum. Additionally, four plants per species per compartment were inoculated with buffer only. For C. sativus, cotyledons of eight plants were inoculated. All plants were assessed for local and systemic disease symptoms twice a week, until no further symptom progression was observed, with a minimum period of three weeks. In cases where symptoms of Physostegia chlorotic mottle virus (PhCMoV) were unclear, DAS-ELISA [19] was performed on young, uninoculated leaf samples from individual test plants using a polyclonal antiserum specific to PhCMoV (kindly provided by Julius Kühn-Institute, Germany). Negative controls included pooled samples from buffer-inoculated plants of the same species.

Bacterial pathogenicity tests

Bacteria-plant combinations for each experiment are detailed in Table 2. Bacterial isolates (Table 2) were grown on Nutrient Agar (NA), Yeast Extract–Peptone–Glycerol (YPG) or Wilbrink medium under standard laboratory conditions. Depending on the growth speed of the isolates, two-to-five-day old pure cultures were suspended in 0.01 M phosphate buffer (PB). Multiple isolates of some bacterial species were included, because of a high variation in virulence. Symptoms were evaluated at the end of each experiment. The pathogenicity of bacterial isolates on each host species was confirmed in advance. For Ralstonia and Clavibacter, ten plants per isolate were inoculated per compartment [20]. For Xanthomonas, young, fully-expanded leaves were used in a detached leaf assay [21]. For Pseudomonas, one leaf of a plant at the stage of two true leaves was infiltrated with a bacterial suspension under laboratory conditions, as previously described for R. pseudosolanacearum [22]. For each bacteria-plant combination (Table 2, Experiment B1), re-isolation was performed by selecting one symptomatic plant [23]. For re-isolation of C. sepedonicus, YPG plates were incubated at 21oC until colonies with a typical morphology of the initially inoculated isolate appeared. These colonies were selected and tested with real-time PCR [24] to confirm their identity.

Results

The light spectra of the HPS lights and LEDs compared in this study are shown in Fig 1. The HPS lights predominantly emit yellow and orange light, accompanied by minor peaks of blue, green, and infrared (Fig 1A). In contrast, the “daylight spectrum” LEDs exhibit peaks in both blue and red wavelengths (Fig 1B), whereas the “broad spectrum with far-red“LEDs emit a substantial red peak, with minor peaks in blue and infrared (Fig 1C).

Fig 1. Spectral measurement of light composition (photosynthetic flux density) showing the relative intensity of each wavelength for A) HPS lights (Philips Master SON-T PIA Plus), B) “Daylight spectrum” LEDs (HORTILED top 120v19), C) “Broad spectrum with far-red” LEDs (Fluence VYPR 3p R6 + FR).

Fig 1

Black line: McCree action spectrum, indicating the wavelength composition most effectively utilized by plants for photosynthesis.

The “daylight spectrum” LEDs caused notable deviations in symptom development compared to HPS lights, particularly in virus-infected plants. In bacterial assays, the most pronounced symptom differences occurred when the LEDs were operated at a relatively high light intensity. These issues were resolved with the “broad spectrum with far-red” LEDs at a light intensity similar to HPS, resulting in comparable symptoms to those observed under HPS lights (Table 3).

Table 3. Effects of the tested LEDs on the symptomatology of test plants, compared to HPS lights, following inoculation with viruses and bacteria.

Type of LED Daylight Broad with far-red
Light intensity (µmol/m2/s) 75-131 60-78 52-61 36-64
Viruses Not tested Most symptoms less severe, delayed and/or on less plants (experiment V1a) Most symptoms less severe, delayed and/or on less plants (experiment V1b) Comparable symptoms (experiment V2)
Bacteria Most symptoms less severe, delayed, and/or on less plants (experiment B1) Symptoms slightly less severe, slightly delayed, and/or on less plants (experiment B2) Not tested Comparable symptoms (experiment B3)

Daylight spectrum

Virus disease assays performed under “daylight spectrum” LEDs (experiment V1a) resulted in delayed and less pronounced virus symptoms on fewer test plants compared to HPS lights. For TRSV (S1A Table), notable differences in symptom development were observed: on Nicotiana spp., the typical concentric rings associated with nepovirus infections were less distinct under LEDs compared to HPS lights. Additionally, symptoms on Chenopodium quinoa, including necrotic spots and top necrosis, were less severe under LEDs. In contrast, symptoms on C. sativus, such as chlorotic lesions, mosaic patterns and growth reduction, were more pronounced under LEDs.

Regarding TSWV (S1B Table), various symptoms on N. benthamiana, N. tabacum, Datura stramonium, and N. glutinosa appeared a few days later, were less distinct, and/or visible on slightly fewer plants when exposed to LEDs as compared to HPS lights. On N. occidentalis, the disparities between the two lighting types were minimal.

The largest differences in symptom development were observed for PhCMoV (S1C Table). Under LEDs, only one N. benthamiana plant showed symptoms, including rugosity and growth reduction, whereas under HPS lights clear symptoms appeared on all four plants and at earlier time points. The remaining three plants under LEDs exhibited only faint symptoms. PhCMoV was only detected in three out of four plants under LEDs by DAS-ELISA (S2 Table). For N. occidentalis, only two plants displayed chlorotic veins under LEDs, whereas under HPS distinct chlorotic veins and growth inhibition were observed on all four plants at an earlier timepoint. PhCMoV was only detected in the two symptomatic plants under LEDs by DAS-ELISA (S2 Table). All four N. occidentalis plants under LEDs also showed chlorosis on the leaves of the flowering stem. However, since this type of chlorosis was also observed on the four control plants inoculated with buffer only, these symptoms were not virus-induced as confirmed by DAS-ELISA. In conclusion, PhCMoV-induced symptoms under LEDs were not always clear, though based on DAS-ELISA three out of four N. benthamiana and two out of four N. occidentalis plants were infected. In contrast, under HPS, all plants became infected based on their clear symptoms.

To exclude potential effects of light intensity, LEDs were dimmed to 16% of their maximum output to better match the intensity of the HPS lights (experiment V1b). This adjustment was made because the LED light intensity in experiment V1a was approximately 35% higher than that of the HPS lights. A partial repetition of experiment V1a was conducted, focusing on the inoculations that showed large differences between LEDs and HPS (Table 1). However, due to longer daylight hours and an increase in sunny days compared to experiment V1a, the lights were activated for a shorter duration. Nonetheless, the (concentric) rings indicave of TRSV infection remained less pronouned or appeared later under LEDs compared to HPS on N. benthamiana and N. tabacum. No such differences were observed for N. occidentalis. For PhCMoV on N. benthamiana, symptoms appeared slightly later and no growth inhibition was observed under LEDs. On N. occidentalis, vein chlorosis was visible on only one out of four plants under LEDs, compared to three out of four plants under HPS lights (S3 Table). Clearly, differences in virus symptomatology between LEDs and HPS lights persisted, even with more similar light intensities.

In bacterial disease assays under “daylight spectrum” LEDs (experiments B1 and B2), symptom development was (slightly) delayed, symptoms were (slightly) less severe, and fewer plants were affected compared to HPS lights (S6 and S7 Tables).

Under undimmed LEDs (experiment B1), R. solanacearum phylotype II isolate PD2762 induced typical wilting symptoms on a lower number of S. lycopersicum plants compared to HPS lights (S6B Table). Several plants remained symptom-free, or symptoms were unclear (S6B Table). However, isolates PD7465 and PD7466 and R. pseudosolanacearum phylotype I isolate PD7123, induced wilting symptoms in all plants under undimmed daylight spectrum LEDs and HPS lights (S6B Table). Under dimmed daylight spectrum LEDs (experiment B2) all R. solanacearum or R. pseudosolanacearum isolates induced typical wilting symptoms on all plants (S7B Table). Although not quantified, S. lycopersicum plants showed delayed symptom development and less severe symptoms under daylight spectrum LEDs than HPS, irrespective of the isolate. However, this delayed symptom development was less pronounced in experiment B2 (dimmed daylight spectrum LED) than in experiment B1 (undimmed daylight spectrum LED). Both Ralstonia pathogens were confirmed as the causal agent of the wilting symptoms in experiment B1.

For C. sepedonicus, a slightly lower number of S. melongena plants showed disease symptoms under undimmed LEDs (experiment B1) compared to HPS lights (S6A Table). Under the dimmed LEDs (experiment B2), isolate PD7861 induced symptoms in a comparable number of plants by the end of the experiment as under HPS lights (S7A Table). However, for isolate PD406 a higher number of plants remained symptom-free (S7A Table). Symptom development was delayed under LEDs, especially when undimmed (experiment B1). Plants under LEDs took several additional days to develop the typical leaf senescence and collapse symptoms, but this was not quantified, as plants were only assessed at the end of the experiment when most plants developed clear symptoms. C. sepedonicus was confirmed as the causal agent of the induced symptoms (experiment B1). In addition, the severity of the symptoms was slightly reduced under LEDs compared to HPS.

Upon leaf infiltration with P. syringae pv. syringae, N. tabacum leaves showed a comparable strong hypersensitive response (HR) 24 h post-infiltration, irrespective of the light conditions under which the plants were previously grown (S7C Table).

Differences in plant growth and development were observed under LEDs compared to HPS, though these observations were not quantified. Some plants grown under LEDs appeared slightly larger and had a darker green color (experiment V1). Plant growth was highly promoted when plants were exposed to the undimmed LEDs (experiment B1) with light intensity nearly twice as high as that of the HPS lights (Table 2). This effect was particularly evident in S. melongena, which also showed pronounced yellowing. In general, plants grown under LEDs (experiment B1 and B2) developed firmer stems, a broader structure, larger leaves, and increased side-branching. These traits were less pronounced under dimmed LEDs (experiment B2).

Broad with far-red spectrum

Virus disease assays under “broad spectrum with far-red” LEDs, which have a spectral composition more similar to that of HPS lights, resulted in symptoms comparable to those observed under HPS lights (S4 Table). For PhCMoV, several symptoms appeared earlier or were more prevalent under LEDs, in contrast to experiment V1 (“daylight spectrum”), where only some plants under LEDs showed (clear) symptoms. PhCMoV symptom development under HPS was consistent with the observations in experiment V1.

Bacterial disease assays under the “broad spectrum with far-red” LEDs also gave comparable results to those observed under HPS lights (experiment B3, S8 Table). Unlike the “daylight spectrum” LEDs (experiment B1 and B2), no delay of disease symptom development or severity of symptoms was observed, and the number of plants with symptoms was almost the same as under HPS lights (S8 Table).

X. citri pv. citri (S8C Table) induced typical symptoms, including glassy tissue and development of corky lesions at the site of infiltration, and pronounced leaf chlorosis often leading to necrosis, under both light conditions. Symptoms were slightly more pronounced on leaves grown under LEDs. For X. citri pv. aurantifolii, similar results were obtained in C. calamondin “Oriana”, while no symptoms were observed in C. sinensis “Aurancio” under either light condition. N. tabacum leaf infiltration with P. syringae pv. syringae induced a strong hypersensitive response, regardless of prior light conditions (S8D Table).

In contrast to the observations under “daylight spectrum” LEDs, plant growth and development of test plants, prior to inoculation, were highly similar between “broad spectrum with far-red” LEDs and HPS.

Discussion

The results of these comparative studies between HPS lights and two types of LEDs revealed that not all LEDs are suitable for disease assays involving plant pathogenic viruses and bacteria. LED horticultural lighting is typically optimized for plant growth and quality, but spectral composition also influences plant secondary metabolism and defense mechanisms [25,26]. Unlike HPS lights, which primarily emit yellow and orange light with minor peaks in blue, green, and infrared (Fig 1A), the “daylight spectrum” LEDs featured pronounced peaks in both blue and red wavelengths (Fig 1B). These wavelengths aligned more closely with the McCree action spectrum [27], representing the wavelengths most efficiently used in photosynthesis and likely contributed to increased plant size, although size differences were not quantified. Red light supplemented with blue light is associated with enhanced biomass production in rice [28], whereas the blue light peak may explain the yellow pigmentation observed in S. melongena leaves, as excessive chlorotic areas have been reported in tomato leaves under continuous monochromatic blue light [29]. Furthermore, blue light has been shown to increase carotenoid content in baby leaf lettuce [30] and Chinese cabbage [31], which supports photosynthesis and protects the photosystem from reactive oxygen species damage [32].

In addition to the spectrum, light intensity was also found to influence plant size. At full intensity, the “daylight spectrum” LEDs enhanced the growth of S. lycopersicum and S. melongena compared to dimmed LEDs. In S. melongena, elevated light intensity has been associated with an increased photosynthetic response [16]. Similarly, fresh leaf weight of red lettuce increased by 78% when LED light intensity rose from 130 µmol m−2 s−1 to 389 µmol m−2 s−1, due to increased photosynthesis [33]. In contrast to the “daylight spectrum” LEDs, “broad spectrum with far-red” LEDs feature a red-light peak and an additional far-red peak but lack a dominant blue light peak (Fig 1C), and resulted in similar plant development and growth as under HPS lighting.

Since the primary objective of this study was to identify LEDs under which disease symptoms are clearly expressed, the symptoms of plants inoculated with various viruses and bacteria were compared with those obtained under HPS lights. Under “daylight spectrum” LEDs, virus symptoms were generally less pronounced or even absent compared to those observed under HPS lights for various virus-plant combinations (experiment V1). For example, approximately half of the plants inoculated with PhCMoV showed no signs of infection under daylight spectrum LEDs, whereas all plants inoculated under HPS lights displayed clear symptoms. Similar challenges with virus symptom expression under LED lighting were reported in a different laboratory [34]. Regarding bacteria, symptoms developed on most of the inoculated test plants under “daylight spectrum” LEDs, but symptom onset was delayed, and severity was reduced, especially under high light intensities (experiments B1 and B2).

To assess whether light intensity affected virus symptom development, experiment V1b was conducted using a light intensity more closely matching that of HPS lights. Due to extended daylight hours, experiment V1b (February-March) required fewer hours of supplemental lighting compared to experiments V1a, B1 and B2 (December-January). Despite this difference, disparities in symptom development persisted between LEDs and HPS in experiment V1b, similar to those observed in experiment V1a. Fewer plants showed symptoms, or symptoms were less pronounced, and appeared later under the “daylight spectrum” LEDs compared to HPS. The persistent differences between LEDs and HPS indicates that the higher LED light intensity in experiment V1a did not account for the significant deviations in virus symptomatology between LED and HPS.

As spectral composition has been shown to influence pathogen resistance, further experiments were performed with “broad spectrum with far-red” LEDs, with a spectrum more comparable to that of HPS lights. For both viruses and bacteria, symptoms developed similarly to HPS lights (Experiment V2 and B3). For PhCMoV, symptom development typically takes longer than for other plant viruses and, therefore, plants were monitored for an extended period. Five to six weeks post-inoculation, chlorotic symptoms appeared not only on virus-inoculated plants but also on negative controls. This suggested a physiological origin of these symptoms, likely due to nutrient deficiencies. These physiological symptoms were more pronounced under LEDs than under HPS. Without negative controls, these physiological symptoms could have been mistaken for virus-related symptoms, underscoring the importance of including negative controls [35], especially in long-duration assays. The influence of spectral composition, especially the delay in symptom development with increased blue light, was also found by Schuerger and Brown [14], who reported that symptoms of tomato mosaic virus appeared later and were less severe under light with blue and UV-A wavelengths, compared to light sources lacking these wavelengths. Also, cucumber mosaic virus symptoms were less pronounced under red and blue light, than under white light [10], which resembles the decrease in symptom severity observed in this study under the “daylight spectrum” LEDs with red and blue light peaks. In contrast, supplemental far-red light increased disease severity of B. cinerea, Phytophthora infestans and Pseudomonas syringae in tomato [36]. Similarly, in this study, enhanced symptom development was observed when far-red light was incorporated into the light spectrum. However, spectral composition has been shown to affect different pathosystems in varying ways [14,16].

Regarding energy consumption, the “broad spectrum with far-red” LEDs had a maximum power output of 600 W compared to 400 W for the HPS lights. By operating the LEDs at 16% of their maximum power to match the light intensity of HPS, energy consumption was reduced by approximately 75% (0.16 * 600 W for LED vs. 400 W for HPS). While reduced heat output from the LEDs in winter may slightly increase heating costs, the overall energy use in a greenhouse is expected to be lower with LEDs than HPS [2]. Additionally, the perceived temperature in LED-lit compartments is lower than in those with HPS lights, due to the reduced radiant heat from LEDs, which may be more comfortable for greenhouse staff [37].

Concluding, light intensity was shown to influence bacterial symptoms, whereas spectral composition was the more critical factor for virus symptoms. For both bacteria and viruses, disease assays performed under dimmed “broad spectrum with far-red” LEDs, gave the best results, comparable to HPS lights. Furthermore, these LEDs facilitated visual assessment of disease symptoms because the light appears more white in comparison to the yellow/orange light emitted by HPS, due to its more balanced spectrum and the inclusion of green light [38]. Since the primary aim of this study was to identify LEDs that could replace HPS lights in disease assays, this study does not provide an exhaustive comparison of different lighting options. Nevertheless, it underscores the critical role of light intensity and spectrum in successful disease assays, which should be considered when transitioning to new types of light sources. Overall, the findings indicate that “broad spectrum with far-red” LEDs can serve as a suitable alternative to HPS lights for disease assays on plant pathogenic viruses and bacteria.

Supporting information

S1 Table. Experiment V1a: symptom development under HPS and “daylight spectrum” LEDs on test plants inoculated with (A) tobacco ringspot virus, (B) tomato spotted wilt virus, and (C) Physostegia chlorotic mottle virus.

(XLSX)

pone.0328277.s001.xlsx (15.7KB, xlsx)
S2 Table. Experiment V1a: systemic symptoms and DAS-ELISA results of plants inoculated with Physostegia chlorotic mottle virus (isolate 33226137) under “daylight spectrum” LEDs.

(XLSX)

pone.0328277.s002.xlsx (11.5KB, xlsx)
S3 Table. Experiment V1b: symptom development under HPS and “daylight spectrum” LEDs on test plants inoculated with (A) tobacco ringspot virus, and (B) Physostegia chlorotic mottle virus.

(XLSX)

pone.0328277.s003.xlsx (12.8KB, xlsx)
S4 Table. Experiment V2: symptom development under HPS and “broad spectrum + far-red” LEDs on test plants inoculated with (A) tobacco ringspot virus, (B) tomato spotted wilt virus, and (C) Physostegia chlorotic mottle virus.

(XLSX)

pone.0328277.s004.xlsx (15.6KB, xlsx)
S5 Table. Experiment V1 and V2: symptom abbreviations.

(XLSX)

pone.0328277.s005.xlsx (10.1KB, xlsx)
S6 Table. Experiment B1: symptom evaluation under HPS and undimmed “daylight spectrum” LEDs on test plants inoculated with (A) Clavibacter sepedonicus, and (B) Ralstonia pseudosolanacearum phylotype I and Ralstonia solanacearum phylotype II.

(XLSX)

pone.0328277.s006.xlsx (13.3KB, xlsx)
S7 Table. Experiment B2: symptom evaluation under HPS and dimmed “daylight spectrum” LEDs on test plants inoculated with (A) Clavibacter sepedonicus, (B) Ralstonia pseudosolanacearum phylotype I and Ralstonia solanacearum phylotype II and (C) Pseudomonas syringae pv. syringae.

(XLSX)

pone.0328277.s007.xlsx (12.7KB, xlsx)
S8 Table. Experiment B3: symptom evaluation under HPS and “broad spectrum with far-red” LEDs on test plants inoculated with (A) Clavibacter sepedonicus, (B) Ralstonia pseudosolanacearum phylotype I and Ralstonia solanacearum phylotype II, (C) Xanthomonas citri pv. aurantifolii and pv. citri and (D) Pseudomonas syringae pv. syringae.

(XLSX)

pone.0328277.s008.xlsx (12.7KB, xlsx)

Acknowledgments

We would like to thank Leo Lansbergen and Dennis Raadschelders from Fluence (Signify) for their assistance in the selection of LEDs and for light spectrum measurements. We would also like to thank greenhouse and technical staff for their support.

The antiserum against Physostegia chlorotic mottle virus was kindly provided by the Julius Kühn-Institute, Germany, through the European Virus Archive GLOBAL (EVA-GLOBAL) project that has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No 871029.

Data Availability

All relevant data are within the paper and its Supporting Information files.

Funding Statement

The author(s) received no specific funding for this work.

References

  • 1.Kusuma P, Pattison PM, Bugbee B. From physics to fixtures to food: current and potential LED efficacy. Hortic Res. 2020;7:56. doi: 10.1038/s41438-020-0283-7 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 2.Katzin D, Marcelis LFM, van Mourik S. Energy savings in greenhouses by transition from high-pressure sodium to LED lighting. Appl Energy. 2021;281:116019. doi: 10.1016/j.apenergy.2020.116019 [DOI] [Google Scholar]
  • 3.Singh D, Basu C, Meinhardt-Wollweber M, Roth B. LEDs for energy efficient greenhouse lighting. Renew Sustain Energy Rev. 2015;49:139–47. [Google Scholar]
  • 4.Paucek I, Appolloni E, Pennisi G, Quaini S, Gianquinto G, Orsini F. LED lighting systems for horticulture: business growth and global distribution. Sustainability. 2020;12(18). [Google Scholar]
  • 5.Philips. MASTER SON-T PIA Plus 400W E E40 1SL/12, Product Leaflet April 16 2023. In: Lighting P, editor. 2023.
  • 6.Paradiso R, Proietti S. Light-quality manipulation to control plant growth and photomorphogenesis in greenhouse horticulture: the state of the art and the opportunities of modern LED systems. J Plant Growth Regul. 2021;41(2):742–80. doi: 10.1007/s00344-021-10337-y [DOI] [Google Scholar]
  • 7.EU. Regulation (EU) 2017/852 of the European Parliament and of the Council of 17 May 2017 on mercury, and repealing Regulation (EC) No 1102/2008. Off J Eur Union. 2017;137:1–21. [Google Scholar]
  • 8.Bawden FC, Roberts FM. The influence of light intensity on the susceptibility of plants to certain viruses. Ann Appl Biol. 1947;34(2):286–96. doi: 10.1111/j.1744-7348.1947.tb06364.x [DOI] [PubMed] [Google Scholar]
  • 9.Bonomi HR, Toum L, Sycz G, Sieira R, Toscani AM, Gudesblat GE, et al. Xanthomonas campestris attenuates virulence by sensing light through a bacteriophytochrome photoreceptor. EMBO Rep. 2016;17(11):1565–77. doi: 10.15252/embr.201541691 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 10.Chen L, Zhao F, Zhang M, Lin H, Xi D. Effects of light quality on the interaction between cucumber mosaic virus and nicotiana tabacum. J Phytopathol. 2015;163(11–12):1002–13. doi: 10.1111/jph.12408 [DOI] [Google Scholar]
  • 11.Kraiselburd I, Alet AI, Tondo ML, Petrocelli S, Daurelio LD, Monzón J, et al. A LOV protein modulates the physiological attributes of Xanthomonas axonopodis pv. citri relevant for host plant colonization. PLoS One. 2012;7(6):e38226. doi: 10.1371/journal.pone.0038226 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 12.Oberpichler I, Rosen R, Rasouly A, Vugman M, Ron EZ, Lamparter T. Light affects motility and infectivity of Agrobacterium tumefaciens. Environ Microbiol. 2008;10(8):2020–9. doi: 10.1111/j.1462-2920.2008.01618.x [DOI] [PubMed] [Google Scholar]
  • 13.Santamaría-Hernando S, Rodríguez-Herva JJ, Martínez-García PM, Río-Álvarez I, González-Melendi P, Zamorano J, et al. Pseudomonas syringae pv. tomato exploits light signals to optimize virulence and colonization of leaves. Environ Microbiol. 2018;20(12):4261–80. doi: 10.1111/1462-2920.14331 [DOI] [PubMed] [Google Scholar]
  • 14.Schuerger AC, Brown CS. Spectral quality affects disease development of three pathogens on hydroponically grown plants. HortScience. 1997;32(1):96–100. doi: 10.21273/hortsci.32.1.96 [DOI] [PubMed] [Google Scholar]
  • 15.Alsanius B, Karlsson M, Rosberg A, Dorais M, Naznin M, Khalil S, et al. Light and microbial lifestyle: the impact of light quality on plant–microbe interactions in horticultural production systems—a review. Horticulturae. 2019;5(2). [Google Scholar]
  • 16.Anja Dieleman J, Marjolein Kruidhof H, Weerheim K, Leiss K. LED lighting strategies affect physiology and resilience to pathogens and pests in eggplant (Solanum melongena L.). Front Plant Sci. 2021;11:610046. doi: 10.3389/fpls.2020.610046 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 17.Janse JD. Phytobacteriology: Principles and Practice. CABI Publishing; 2007. [Google Scholar]
  • 18.Verhoeven JTHJ, Roenhorst JW. Herbaceous test plants for the detection of quarantine viruses of potato*. EPPO Bulletin. 2000;30(3–4):463–7. doi: 10.1111/j.1365-2338.2000.tb00930.x [DOI] [Google Scholar]
  • 19.Giesbers AKJ, Roenhorst A, Schenk MF, Westenberg M, Botermans M. African eggplant-associated virus: characterization of a novel tobamovirus identified from Solanum macrocarpon and assessment of its potential impact on tomato and pepper crops. PLoS One. 2023;18(4):e0277840. doi: 10.1371/journal.pone.0277840 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 20.Overeem R, Pel C, Tjou-Tam-Sin N, van de Bilt J, Gorkink-Smits P, Landman M, et al. Virulence of Novel Ralstonia pseudosolanacearum (Phylotype I) Strains from Rose, Blueberry, and Mandevilla on Seed Potato. Plant Dis. 2023;107(12):3718–26. doi: 10.1094/PDIS-12-22-2931-SR [DOI] [PubMed] [Google Scholar]
  • 21.Volkers RJM, van Doorn BBJA, Blom NI, van de Bilt JLJ, Gorkink-Smits PMA, Landman MNM, et al. Xanthomonas citri pv. citri findings in citrus fruits imported in the Netherlands. Plant Health Progress. 2024;25(3):237–43. doi: 10.1094/php-12-23-0107-sc [DOI] [Google Scholar]
  • 22.Bergsma-Vlami M, van de Bilt JLJ, Tjou-Tam-Sin NNA, Westenberg M, Meekes ETM, Teunissen HAS, et al. Phylogenetic Assignment of Ralstonia pseudosolanacearum (Ralstonia solanacearum Phylotype I) Isolated from Rosa spp. Plant Dis. 2018;102(11):2258–67. doi: 10.1094/PDIS-09-17-1345-RE [DOI] [PubMed] [Google Scholar]
  • 23.Tjou-Tam-Sin NNA, van de Bilt JLJ, Westenberg M, Gorkink-Smits PPMA, Landman NM, Bergsma-Vlami M. Assessing the pathogenic ability of Ralstonia pseudosolanacearum (Ralstonia solanacearum Phylotype I) from Ornamental Rosa spp. Plants. Front Plant Sci. 2017;8:1895. doi: 10.3389/fpls.2017.01895 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 24.Schaad NW, Berthier-Schaad Y, Sechler A, Knorr D. Detection of Clavibacter michiganensis subsp. sepedonicus in Potato Tubers by BIO-PCR and an Automated Real-Time Fluorescence Detection System. Plant Dis. 1999;83(12):1095–100. doi: 10.1094/PDIS.1999.83.12.1095 [DOI] [PubMed] [Google Scholar]
  • 25.Lazzarin M, Meisenburg M, Meijer D, van Ieperen W, Marcelis LFM, Kappers IF. LEDs make it resilient: effects on plant growth and defense. Trends Plant Sci. 2021;26(5):496–508. [DOI] [PubMed] [Google Scholar]
  • 26.Wang D, Dawadi B, Qu J, Ye J. Light-Engineering technology for enhancing plant disease resistance. Front Plant Sci. 2022;12:805614. doi: 10.3389/fpls.2021.805614 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 27.McCree KJ. The action spectrum, absorptance and quantum yield of photosynthesis in crop plants. Agric Meteorol. 1971;9:191–216. doi: 10.1016/0002-1571(71)90022-7 [DOI] [Google Scholar]
  • 28.Ohashi-Kaneko K, Matsuda R, Goto E, Fujiwara K, Kurata K. Growth of rice plants under red light with or without supplemental blue light. Soil Sci Plant Nutr. 2006;52(4):444–52. doi: 10.1111/j.1747-0765.2006.00063.x [DOI] [Google Scholar]
  • 29.Pham MD, Hwang H, Park SW, Cui M, Lee H, Chun C. Leaf chlorosis, epinasty, carbohydrate contents and growth of tomato show different responses to the red/blue wavelength ratio under continuous light. Plant Physiol Biochem. 2019;141:477–86. doi: 10.1016/j.plaphy.2019.06.004 [DOI] [PubMed] [Google Scholar]
  • 30.Li Q, Kubota C. Effects of supplemental light quality on growth and phytochemicals of baby leaf lettuce. Environ Exp Botany. 2009;67(1):59–64. doi: 10.1016/j.envexpbot.2009.06.011 [DOI] [Google Scholar]
  • 31.Zhang R, Yang W, Pan Q, Zeng Q, Yan C, Bai X, et al. Effects of long-term blue light irradiation on carotenoid biosynthesis and antioxidant activities in Chinese cabbage (Brassica rapa L. ssp. pekinensis). Food Res Int. 2023;174(Pt 2):113661. doi: 10.1016/j.foodres.2023.113661 [DOI] [PubMed] [Google Scholar]
  • 32.Simkin AJ. Carotenoids and Apocarotenoids in Planta: their role in plant development, contribution to the flavour and aroma of fruits and flowers, and their nutraceutical benefits. Plants (Basel). 2021;10(11):2321. doi: 10.3390/plants10112321 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 33.Modarelli GC, Paradiso R, Arena C, De Pascale S, Van Labeke MC. High light intensity from blue-red LEDs enhance photosynthetic performance, plant growth, and optical properties of red lettuce in controlled environment. Horticulturae. 2022;8(2). [Google Scholar]
  • 34.Skelton A, Frew L, Ward R, Hodgson R, Forde S, McDonough S. Tomato brown rugose fruit virus: survival and disinfection efficacy on common glasshouse surfaces. Viruses. 2023;15(10). [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 35.Legrand P. Biological assays for plant viruses and other graft‐transmissible pathogens diagnoses: a review. EPPO Bulletin. 2015;45(2):240–51. doi: 10.1111/epp.12222 [DOI] [Google Scholar]
  • 36.Courbier S, Grevink S, Sluijs E, Bonhomme P-O, Kajala K, Van Wees SCM, et al. Far-red light promotes Botrytis cinerea disease development in tomato leaves via jasmonate-dependent modulation of soluble sugars. Plant Cell Environ. 2020;43(11):2769–81. doi: 10.1111/pce.13870 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 37.Palmitessa OD, Prinzenberg AE, Kaiser E, Heuvelink E. LED and HPS Supplementary Light Differentially Affect Gas Exchange in Tomato Leaves. Plants (Basel). 2021;10(4):810. doi: 10.3390/plants10040810 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 38.Runkle E. Growing plants with green light. Greenhouse Product News. 2017. pp. 58. [Google Scholar]

Decision Letter 0

Karthik Kannan

7 May 2025

Dear Dr. Giesbers,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

Please submit your revised manuscript by Jun 21 2025 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org . When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

  • A rebuttal letter that responds to each point raised by the academic editor and reviewer(s). You should upload this letter as a separate file labeled 'Response to Reviewers'.

  • A marked-up copy of your manuscript that highlights changes made to the original version. You should upload this as a separate file labeled 'Revised Manuscript with Track Changes'.

  • An unmarked version of your revised paper without tracked changes. You should upload this as a separate file labeled 'Manuscript'.

If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter.

If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols . Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols .

We look forward to receiving your revised manuscript.

Kind regards,

Karthik Kannan, Ph. D.,

Academic Editor

PLOS ONE

Journal Requirements:

When submitting your revision, we need you to address these additional requirements.

1.Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at

https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and

https://journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf

2. Please note that funding information should not appear in any section or other areas of your manuscript. We will only publish funding information present in the Funding Statement section of the online submission form. Please remove any funding-related text from the manuscript.

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Is the manuscript technically sound, and do the data support the conclusions?

Reviewer #1: No

Reviewer #2: Yes

Reviewer #3: Partly

**********

2. Has the statistical analysis been performed appropriately and rigorously? -->?>

Reviewer #1: No

Reviewer #2: Yes

Reviewer #3: No

**********

3. Have the authors made all data underlying the findings in their manuscript fully available??>

The PLOS Data policy

Reviewer #1: Yes

Reviewer #2: Yes

Reviewer #3: Yes

**********

4. Is the manuscript presented in an intelligible fashion and written in standard English??>

Reviewer #1: No

Reviewer #2: Yes

Reviewer #3: No

**********

Reviewer #1: Specific comments on the manuscript:

-The research results are superficial, lack novelty, and primarily consist of enumerative experiments.

-The study’s objectives and scientific rationale are unclear.

-The tables and figures presented are difficult to interpret.

-The authors should invest more time in revising the manuscript. Key improvements should include:

• Clearly defining research goals.

• Detailing the experimental methodology more thoroughly.

• Presenting results in a logical, scientifically grounded manner.

• Condensing the Introduction and Conclusion to highlight key findings more effectively.

Reviewer #2: The manuscript “Comparison and selection of light-emitting diodes (LEDs) for disease assays on plant pathogenic viruses and bacteria in greenhouses” is structured and written well. There are numerous strengths in the study, including its novel technique to analyze the disease on plant pathogenic viruses and bacteria using different diodes experiments that have been carried out. Overall, I consider this to be a good quality manuscript but an addition of few details and clarification can make it an excellent contribution to the mitigation techniques. Specific comments are given below.

Specific Comments

Comment 1: in introduction section, author mentioned diseases. Author should provide few lines with the detail of diseases and their causative agents for better understanding

Comment 2: Table no 1- I suggested that Author can remove the blank column and row that could be a neat presentation and avoid the mix-ups.

Comment 3: Discussion – author kindly describe the nature of plant varieties which subjected to analysis.

Comment 4: Author should compare the previous report for enhancing the current research values and strong scientific supports.

Comment 5: what is the significant result obtained through the analysis.

Comment 6: In Results and discussion, author should check the sentence as well.

Comment 7: There are many grammatical mistakes that need to be rectified before submitting for publication.

Comment 8: The authors must check if they have given the citations, references, Figure legends and table legends according to the format given in the Journal guide lines.

Reviewer #3: The research article titled "Comparison and selection of light-emitting diodes (LEDs) for disease assays on plant pathogenic viruses and bacteria in greenhouses " is an excellent contribution, and I hope it will attract the reader for future research. The authors have successfully evaluated LEDs for disease assays on plant pathogenic viruses and bacteria. But the manuscript has some major mistakes that the author needs to correct before the manuscript goes for publication. Some of the suggestions/comments are provided below to further improve the structure of the manuscript. I recommend it for publication (major revision) after carefully addressing the suggested comments.

1. Author should be adding keywords

2. The abstract should be modified with your result. So, the author should be restructuring the abstract.

3. In the Introduction, should be add the novelty and problem of the study

4. They should be discussed with recent literature

5. Should be add conclusion of the study

6. Should be include statistical analysis

7. The author should correct all the typo errors throughout the manuscript

8. author needs to improve the English corrections; most of the sentences are improper and hard to read.

**********

what does this mean? ). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy

Reviewer #1: No

Reviewer #2: Yes:  Dr.D.Swarna bharathi

Reviewer #3: Yes:  Dr. R. Krishnamoorthi,

Postdoctoral Researcher

Chang Gung University,

Taiwan

**********

[NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.]

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/ . PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org . Please note that Supporting Information files do not need this step.

Attachment

Submitted filename: Reviewer Comment 1.docx

pone.0328277.s009.docx (14.1KB, docx)
PLoS One. 2025 Aug 11;20(8):e0328277. doi: 10.1371/journal.pone.0328277.r002

Author response to Decision Letter 1


14 May 2025

Dear editor, dear reviewers,

Thank you for the time and effort you have dedicated to evaluating our manuscript. We appreciate the feedback and have worked carefully to revise the manuscript in response to the suggestions provided.

While we have addressed all comments to the best of our ability, we are concerned that some of the feedback may reflect a limited familiarity with the specific context of plant pathology and diagnostics. As a result, a few comments appear to be general or not fully aligned with the core focus of the manuscript. Nevertheless, we have revised the manuscript accordingly where appropriate.

Below, we provide a detailed response to each point raised by the reviewers.

Please note that I will be out of the office from May 28 until June 23, with limited access to my email.

Yours sincerely,

Anne Giesbers

Reviewer #1: Specific comments on the manuscript:

-The research results are superficial, lack novelty, and primarily consist of enumerative experiments.

Authors: We are very surprised by this comment. This study comprised several years of novel work. As far as we know, there is no literature available on the effect of LED light versus HPS light on plant pathogen diagnostics.

-The study’s objectives and scientific rationale are unclear.

Authors: the study’s objectives and rationale are stated in the last paragraph of the Introduction, we have slightly rephrased this paragraph.

-The tables and figures presented are difficult to interpret.

Authors: We have adjusted the tables to improve consistency and readability.

-The authors should invest more time in revising the manuscript. Key improvements should include:

• Clearly defining research goals.

Authors: Research goals are defined in the last paragraph of the introduction.

• Detailing the experimental methodology more thoroughly.

Authors: We think that our Materials & Methods section is complete. Please elaborate which details you are missing if you do not agree.

• Presenting results in a logical, scientifically grounded manner.

Authors: We have improved some sentences for improved readability and consistency. We think our results are presented in a logical and scientifically grounded manner. Please elaborate and provide examples if you do not agree.

• Condensing the Introduction and Conclusion to highlight key findings more effectively.

Authors: We have rephrased several sentences to enhance clarity and better convey our message. The key findings are summarized in the final paragraph of the Discussion.

Reviewer #2: The manuscript “Comparison and selection of light-emitting diodes (LEDs) for disease assays on plant pathogenic viruses and bacteria in greenhouses” is structured and written well. There are numerous strengths in the study, including its novel technique to analyze the disease on plant pathogenic viruses and bacteria using different diodes experiments that have been carried out. Overall, I consider this to be a good quality manuscript but an addition of few details and clarification can make it an excellent contribution to the mitigation techniques. Specific comments are given below.

Authors: Thank you for appreciating our work and for providing feedback. We have done our best to improve the manuscript where needed.

Specific Comments

Comment 1: in introduction section, author mentioned diseases. Author should provide few lines with the detail of diseases and their causative agents for better understanding

Authors: A variety of bacteria and viruses were included in this study to capture a wide range of disease symptoms. A sentence on this has been added to the Introduction. We believe it is not relevant to further elaborate on the diseases that they cause, as this would distract from the primary goal of our study (the identification of suitable LEDs for disease assays).

Comment 2: Table no 1- I suggested that Author can remove the blank column and row that could be a neat presentation and avoid the mix-ups.

Authors: Thanks for the suggestion, this has been adjusted.

Comment 3: Discussion – author kindly describe the nature of plant varieties which subjected to analysis.

Authors: The plant varieties used in our study are well-established and widely utilized in plant virology and bacteriology research. As such, we feel that providing descriptions of these varieties would be redundant and would divert attention from the primary focus of the study.

Comment 4: Author should compare the previous report for enhancing the current research values and strong scientific supports.

Authors: We have incorporated references to relevant literature where applicable. However, as far as we know, there is no literature available on the effect of LED light versus HPS light on plant pathogen diagnostics.

Comment 5: what is the significant result obtained through the analysis.

Authors: the key findings are mentioned several times, for instance: Abstract (lines 26-28), Discussion (lines 331-342).

Comment 6: In Results and discussion, author should check the sentence as well.

Comment 7: There are many grammatical mistakes that need to be rectified before submitting for publication.

Authors: We have thoroughly checked our manuscript and improved wording throughout.

Comment 8: The authors must check if they have given the citations, references, Figure legends and table legends according to the format given in the Journal guide lines.

Authors: This has been checked and adjusted where needed.

Reviewer #3: The research article titled "Comparison and selection of light-emitting diodes (LEDs) for disease assays on plant pathogenic viruses and bacteria in greenhouses " is an excellent contribution, and I hope it will attract the reader for future research. The authors have successfully evaluated LEDs for disease assays on plant pathogenic viruses and bacteria. But the manuscript has some major mistakes that the author needs to correct before the manuscript goes for publication. Some of the suggestions/comments are provided below to further improve the structure of the manuscript. I recommend it for publication (major revision) after carefully addressing the suggested comments.

Authors: Thank you very much for recognizing the value of our work and for your feedback.

1. Author should be adding keywords

Authors: Keywords had already been provided: Bioassay; pathogenicity test; light intensity; light spectrum; high-pressure sodium (HPS) light; light-emitting diode (LED); test plants

2. The abstract should be modified with your result. So, the author should be restructuring the abstract.

Authors: the last sentence of the abstract mentions our main findings.

3. In the Introduction, should be add the novelty and problem of the study

Authors: The novelty and aim of the study are described in the last two paragraphs of the introduction.

4. They should be discussed with recent literature

We have incorporated references to relevant literature where applicable. However, as far as we know, there is no literature available on the effect of LED light versus HPS light on plant pathogen diagnostics.

5. Should be add conclusion of the study

Authors: The final paragraph of the Discussion serves as the conclusion of our study. We chose not to include a separate conclusion section, as we felt that integrating the concluding remarks within the Discussion allows for a more cohesive and fluid presentation of the findings.

6. Should be include statistical analysis

Authors: We believe that statistical analysis is not applicable to our study due to the nature of the data (qualitative observations) and the objectives of our research. Statistical testing would not provide any additional meaningful insights.

7. The author should correct all the typo errors throughout the manuscript

8. author needs to improve the English corrections; most of the sentences are improper and hard to read.

Authors: We have thoroughly checked our manuscript and improved wording throughout.

Attachment

Submitted filename: 20250514_Response to reviewers.docx

pone.0328277.s011.docx (19.1KB, docx)

Decision Letter 1

Karthik Kannan

9 Jun 2025

Dear Dr. Giesbers,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

Please submit your revised manuscript by Jul 24 2025 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org . When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

  • A rebuttal letter that responds to each point raised by the academic editor and reviewer(s). You should upload this letter as a separate file labeled 'Response to Reviewers'.

  • A marked-up copy of your manuscript that highlights changes made to the original version. You should upload this as a separate file labeled 'Revised Manuscript with Track Changes'.

  • An unmarked version of your revised paper without tracked changes. You should upload this as a separate file labeled 'Manuscript'.

If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter.

If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols . Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols .

We look forward to receiving your revised manuscript.

Kind regards,

Karthik Kannan, Ph. D.,

Academic Editor

PLOS ONE

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

Reviewer #1: All comments have been addressed

Reviewer #2: All comments have been addressed

Reviewer #3: All comments have been addressed

**********

2. Is the manuscript technically sound, and do the data support the conclusions??>

Reviewer #1: Partly

Reviewer #2: Yes

Reviewer #3: Yes

**********

3. Has the statistical analysis been performed appropriately and rigorously? -->?>

Reviewer #1: Yes

Reviewer #2: Yes

Reviewer #3: No

**********

4. Have the authors made all data underlying the findings in their manuscript fully available??>

The PLOS Data policy

Reviewer #1: Yes

Reviewer #2: Yes

Reviewer #3: Yes

**********

5. Is the manuscript presented in an intelligible fashion and written in standard English??>

Reviewer #1: Yes

Reviewer #2: Yes

Reviewer #3: Yes

**********

Reviewer #1: Comments to the authors:

- I have not really noticed the improvements in the article in the revised manuscript.

- The Results and Discussion section should clarify the impact of light on plant diseases. The author should logically rearrange the experiments, and the comparison results should be clearly stated instead of requiring the reader to search for information in the tables in the Supporting Information. The main results should be included in the results and discussion section of the paper, instead of in the supporting Information.

- Table S5 clearly shows the abbreviations. However, in tables S1-V1a, S2_V1a, S3_V1b, S4_V2, parameters such as dpi, index (4/4; 3/4...) are not defined or indicated in the experimental section, making it difficult to follow.

- The paper needs to clearly supplement the conclusion section.

Reviewer #2: Yes the author addressed the comments properly, which paved the way to recommend the article for acceptance.

Reviewer #3: The authors effectively addressed all the comments. I am satisfied with the author's response. Therefore, I may accept it for publication.

**********

what does this mean? ). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy

Reviewer #1: No

Reviewer #2: Yes:  Dr.D.Swarna bharathi

Reviewer #3: Yes:  Raman Krishnamoorthi

**********

[NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.]

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/ . PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org . Please note that Supporting Information files do not need this step.

PLoS One. 2025 Aug 11;20(8):e0328277. doi: 10.1371/journal.pone.0328277.r004

Author response to Decision Letter 2


25 Jun 2025

Reviewer #1: Comments to the authors:

- I have not really noticed the improvements in the article in the revised manuscript.

- The Results and Discussion section should clarify the impact of light on plant diseases.

Authors: A variety of bacteria and viruses were included in this study to capture a wide range of disease symptoms. We believe it is not relevant to further elaborate on the diseases that these pathogens cause, as this would distract from the primary goal of our study: the identification of suitable LEDs for disease assays and diagnostics. Therefore, the focus is on symptom development.

The author should logically rearrange the experiments, and the comparison results should be clearly stated instead of requiring the reader to search for information in the tables in the Supporting Information. The main results should be included in the results and discussion section of the paper, instead of in the supporting Information.

Authors: The main results are summarized in Table 3 and discussed throughout the paper. Due to the number of individual experiments, we chose to include the data as a supplemental file.

- Table S5 clearly shows the abbreviations. However, in tables S1-V1a, S2_V1a, S3_V1b, S4_V2, parameters such as dpi, index (4/4; 3/4...) are not defined or indicated in the experimental section, making it difficult to follow.

Authors: Everything is explained in the table captions: “dpi: days post inoculation, number of test plants showing specific symptoms over the total number of inoculated plants indicated in brackets.”

- The paper needs to clearly supplement the conclusion section.

Authors: The final paragraph of the Discussion serves as the conclusion of our study. We chose not to include a separate conclusion section, as we felt that integrating the concluding remarks within the Discussion allows for a more cohesive and fluid presentation of the findings.

Attachment

Submitted filename: 20250625_Response to reviewers.docx

pone.0328277.s012.docx (15.4KB, docx)

Decision Letter 2

Karthik Kannan

30 Jun 2025

Comparison and selection of light-emitting diodes (LEDs) for disease assays on plant pathogenic viruses and bacteria in greenhouses

PONE-D-25-04310R2

Dear Dr. Giesbers,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication.

An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager®  and clicking the ‘Update My Information' link at the top of the page. If you have any questions relating to publication charges, please contact our Author Billing department directly at authorbilling@plos.org.

If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

Kind regards,

Karthik Kannan, Ph. D.,

Academic Editor

PLOS ONE

Additional Editor Comments (optional):

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

Reviewer #2: All comments have been addressed

Reviewer #3: All comments have been addressed

**********

2. Is the manuscript technically sound, and do the data support the conclusions??>

Reviewer #2: Yes

Reviewer #3: Yes

**********

3. Has the statistical analysis been performed appropriately and rigorously? -->?>

Reviewer #2: Yes

Reviewer #3: No

**********

4. Have the authors made all data underlying the findings in their manuscript fully available??>

The PLOS Data policy

Reviewer #2: Yes

Reviewer #3: Yes

**********

5. Is the manuscript presented in an intelligible fashion and written in standard English??>

Reviewer #2: Yes

Reviewer #3: Yes

**********

Reviewer #2: The review comments were properly addressed by the authors .

There is no additional queries needed to this extremely valuable manuscript.

I have accept the article for publication.

Reviewer #3: (No Response)

**********

what does this mean? ). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy

Reviewer #2: Yes:  Dr.D.Swarna bharathi

Reviewer #3: No

**********

Acceptance letter

Karthik Kannan

PONE-D-25-04310R2

PLOS ONE

Dear Dr. Giesbers,

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team.

At this stage, our production department will prepare your paper for publication. This includes ensuring the following:

* All references, tables, and figures are properly cited

* All relevant supporting information is included in the manuscript submission,

* There are no issues that prevent the paper from being properly typeset

You will receive further instructions from the production team, including instructions on how to review your proof when it is ready. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few days to review your paper and let you know the next and final steps.

Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

You will receive an invoice from PLOS for your publication fee after your manuscript has reached the completed accept phase. If you receive an email requesting payment before acceptance or for any other service, this may be a phishing scheme. Learn how to identify phishing emails and protect your accounts at https://explore.plos.org/phishing.

If we can help with anything else, please email us at customercare@plos.org.

Thank you for submitting your work to PLOS ONE and supporting open access.

Kind regards,

PLOS ONE Editorial Office Staff

on behalf of

Prof. Karthik Kannan

Academic Editor

PLOS ONE

Associated Data

    This section collects any data citations, data availability statements, or supplementary materials included in this article.

    Supplementary Materials

    S1 Table. Experiment V1a: symptom development under HPS and “daylight spectrum” LEDs on test plants inoculated with (A) tobacco ringspot virus, (B) tomato spotted wilt virus, and (C) Physostegia chlorotic mottle virus.

    (XLSX)

    pone.0328277.s001.xlsx (15.7KB, xlsx)
    S2 Table. Experiment V1a: systemic symptoms and DAS-ELISA results of plants inoculated with Physostegia chlorotic mottle virus (isolate 33226137) under “daylight spectrum” LEDs.

    (XLSX)

    pone.0328277.s002.xlsx (11.5KB, xlsx)
    S3 Table. Experiment V1b: symptom development under HPS and “daylight spectrum” LEDs on test plants inoculated with (A) tobacco ringspot virus, and (B) Physostegia chlorotic mottle virus.

    (XLSX)

    pone.0328277.s003.xlsx (12.8KB, xlsx)
    S4 Table. Experiment V2: symptom development under HPS and “broad spectrum + far-red” LEDs on test plants inoculated with (A) tobacco ringspot virus, (B) tomato spotted wilt virus, and (C) Physostegia chlorotic mottle virus.

    (XLSX)

    pone.0328277.s004.xlsx (15.6KB, xlsx)
    S5 Table. Experiment V1 and V2: symptom abbreviations.

    (XLSX)

    pone.0328277.s005.xlsx (10.1KB, xlsx)
    S6 Table. Experiment B1: symptom evaluation under HPS and undimmed “daylight spectrum” LEDs on test plants inoculated with (A) Clavibacter sepedonicus, and (B) Ralstonia pseudosolanacearum phylotype I and Ralstonia solanacearum phylotype II.

    (XLSX)

    pone.0328277.s006.xlsx (13.3KB, xlsx)
    S7 Table. Experiment B2: symptom evaluation under HPS and dimmed “daylight spectrum” LEDs on test plants inoculated with (A) Clavibacter sepedonicus, (B) Ralstonia pseudosolanacearum phylotype I and Ralstonia solanacearum phylotype II and (C) Pseudomonas syringae pv. syringae.

    (XLSX)

    pone.0328277.s007.xlsx (12.7KB, xlsx)
    S8 Table. Experiment B3: symptom evaluation under HPS and “broad spectrum with far-red” LEDs on test plants inoculated with (A) Clavibacter sepedonicus, (B) Ralstonia pseudosolanacearum phylotype I and Ralstonia solanacearum phylotype II, (C) Xanthomonas citri pv. aurantifolii and pv. citri and (D) Pseudomonas syringae pv. syringae.

    (XLSX)

    pone.0328277.s008.xlsx (12.7KB, xlsx)
    Attachment

    Submitted filename: Reviewer Comment 1.docx

    pone.0328277.s009.docx (14.1KB, docx)
    Attachment

    Submitted filename: 20250514_Response to reviewers.docx

    pone.0328277.s011.docx (19.1KB, docx)
    Attachment

    Submitted filename: 20250625_Response to reviewers.docx

    pone.0328277.s012.docx (15.4KB, docx)

    Data Availability Statement

    All relevant data are within the paper and its Supporting Information files.


    Articles from PLOS One are provided here courtesy of PLOS

    RESOURCES