ABSTRACT
The amyloid‐β peptide (Aβ), implicated in Alzheimer's disease, exhibits significant polymorphism. At the monomer level, Aβ can adopt disordered, helical, and β‐hairpin structures, influenced by environmental conditions. Both oligomeric and fibrillar states, characterized by the prevalence of β‐sheets, are polymorphic in the arrangement of β‐strands. This chameleon‐like behavior arises from Aβ’s unique sequence and relatively flat energy landscape, which facilitates aggregation and may contribute to the prevalence of Alzheimer's disease, while also enabling disaggregation, thus slowing disease progression. In contrast, Creutzfeldt‐Jakob disease, which is much rarer, progresses far more rapidly, likely due to the steeper energy landscape of the prion protein.
Keywords: Alzheimer's disease, amyloid aggregation, conformational energy landscape, polymorphism, energy landscape–amyloid disease relationship
The energy landscape of Aβ reveals its flexible, “chameleon‐like” behavior, enabling diverse structures from disordered to β‐rich forms. This polymorphism facilitates aggregation, contributing to Alzheimer's disease progression, while the flat landscape also allows disaggregation, potentially slowing disease progression compared to prion proteins with steeper landscapes.

1. A β Sequence: Contrasting Amino Acid Compositions Between N‐ and C‐Terminal Regions
Amyloid‐β is a peptide that plays a crucial role in the development of Alzheimer's disease (AD), primarily through its aggregation into toxic assemblies ranging from oligomers to fibrillar plaques in the brain [1]. Aβ peptides can vary in length, with the most common forms being 40 and 42 amino acids long, with the 42‐amino‐acid variant often being more prone to aggregation and associated with AD. In the following, I will refer to these peptides as Aβ40 and Aβ42, respectively, while Aβ will be used to denote both Aβ40 and Aβ42 collectively.
The sequence of Aβ42 (Figure 1A) reveals significant differences between the N‐ and C‐terminal regions of the peptide. The N‐terminal side (residues 1 to 28) contains many charged and polar residues, while the C‐terminal side (residues 29 to 42) is predominantly composed of hydrophobic residues. According to Uversky and colleagues, proteins can be categorized as folded or unfolded based on their mean hydrophobicity and net charge [2]. For a neutral protein, if the mean hydrophobicity falls below ∼40%, the protein is usually unfolded. For residues 1–28 of Aβ, the net charge ranges from −3 to 0—depending on the charge states of the histidine residues at positions 6, 13, and 14—and the mean hydrophobicity is 36%. Thus, the N‐terminal region aligns with the characteristics of intrinsically disordered proteins (IDPs). This conclusion is further supported by analyzing the relative enrichment and depletion of specific amino acids. In IDPs, amino acids such as Glu, Ser, Gln, and Lys are significantly enriched, whereas Ala and Gly show moderate enrichment compared to folded proteins; Asp, Thr, and Arg are equally distributed [3]. Approximately 64% of the first 28 Aβ residues fall into these eight amino acid types, suggesting that a majority of the N‐terminal sequence is IDP‐like. In contrast, the C‐terminal region (residues 29 to 42) lacks any charged residues and has 64% hydrophobic content among its 14 residues, reflecting an amino acid composition typical of folded proteins. Most notably, it contains only six residues that are not enriched in ordered proteins, namely four Gly and two Ala residues. Based on these characteristics, one could anticipate a bipartite peptide structure, with the N‐terminal side being disordered and the C‐terminal side adopting a folded conformation.
FIGURE 1.

Sequence and secondary structure prediction for Aβ42. (A) The residues are colored according to their physicochemical properties at physiological pH: hydrophobic, gray; polar, green; positively charged, blue (with His in light blue, as it can also be neutral at pH∼7); negatively charged, red. The amino acid composition for residues 1–28 and 29–42 is provided below the sequence. (B) Secondary structure predictions obtained from various prediction methods [4, 5, 6], with α‐helices, β‐strands, and disordered regions being indicated by magenta squares, yellow arrows, and gray lines, respectively.
A more detailed analysis of the sequence, however, indicates that this conclusion does not fully hold, as some hydrophobic residues in the N‐terminal half are clustered in a specific region between residues 17 and 21. Various secondary structure predictions [4, 5] (Figure 1B) show that this peptide region has a high propensity to form a β‐strand. Additionally, three of the prediction methods (JnetPred, JnetPSSM, and reprof) suggest the formation of helices of varying lengths N‐terminal to the L17–A21 region. For the C‐terminal portion, four out of five prediction methods indicate that this segment is primarily folded, although the predicted amounts of helical and β‐strand structures vary. The predictions generally agree that the first ten N‐ terminal residues and the region E22–K28 are predominantly disordered. The disorder prediction method MetaDisorder [6] forecasts that almost the entire peptide is disordered, with exceptions for the hydrophobic regions L17–A21 and G29–L34. This sequence analysis suggests that reliable structure predictions for the Aβ sequence are challenging, making it difficult to determine whether it is (partly) disordered or folded, and if folded, whether it adopts a helical or β‐sheet structure.
2. Aβ Monomer in Aqueous Solution: A Disordered Peptide
Over the past 25 years, molecular dynamics (MD) simulations of Aβ have confirmed the challenging nature of secondary structure predictions for this peptide [7]. Depending on the force field used, Aβ structures may exhibit helices, β‐sheets, or primarily disordered forms [8]. For example, the Amber99SB‐based force fields [9, 10] a99SB‐UCB [11, 12], a99SB‐ILDN/TIP4P‐D [13], and a99SB‐disp [14] produce expanded and disordered Aβ40 conformations, with a bias toward PPII conformations in the case of a99SB‐disp [8]. In contrast, a99SB‐ILDN/TIP3P [15] results in a more compact Aβ40 due to excessive β‐sheet formation, while the Amber force field a03ws [16] tends to trap Aβ40 in highly compact, helical states despite increased peptide‐water interactions. The latest CHARMM force field, Charmm36 (or Charmm36m) [17], generates largely extended, disordered conformations but with a bias toward β‐hairpin structures. In fact, the modeling of disordered Aβ structures became feasible only after force fields, originally developed for folded proteins, were modified for IDPs. Using IDP‐adapted force fields and experimental methods such as nuclear magnetic resonance (NMR) spectroscopy, small‐angle x‐ray scattering (SAXS), and fluorescence resonance energy transfer (FRET), it is now established that Aβ in aqueous solution at pH ∼7 is a mostly disordered and rather expanded peptide characterized as a random coil (RC) with an average end‐to‐end distance of 4.3 nm and fast relaxation times ranging from approximately 3 ns for localized backbone motions to 100 ns for global chain relaxation [8, 18, 19, 20].
The free energy surfaces (FESs) derived from MD simulations, some of them guided by NMR data, display a primary funnel leading to the global minimum corresponding to the RC state (Figure 2A) [21, 23, 24]. Excited state conformations, such as a β‐hairpin typical of Aβ oligomers or S‐shaped conformations that are the building blocks of fibrils, can be transiently accessed from the RC configurations on the microsecond time scale [21, 24]. This arrangement of the FES, with (partially) folded states at the top of the funnel and disordered states at the bottom, has been referred to as an “inverted free energy landscape” or a “funnel to disorder” [21, 23, 24]. A recent NMR study confirms that Aβ harbors lowly populated transient β‐sheet structures, identifying an antiparallel intramolecular β‐sheet for the C‐terminal residues I32–A42 linked by a turn at G37 and G38 [25]. Meanwhile, MD simulations suggest that an alternative β‐hairpin linking the N‐terminal and C‐terminal hydrophobic regions L17–A21 and G29–L34, stabilized by the salt bridge D23–K28, is also possible [21].
FIGURE 2.

Structures and free energy surfaces of Aβ monomers and oligomers. (A) The FES of the Aβ42 monomer in aqueous solution, illustrated as a disconnectivity graph obtained from MD, reveals a funnel leading to disordered RC states at the bottom. Partially folded conformations are represented as excited states, including β‐hairpin states (H1 and H2) and an S‐shaped state. The energy along the vertical axis is shown in units of kT, and the coloring of the branches corresponds to the number of residues in β‐strand conformation for the respective conformation, ranging from 0 (blue) to 13 (red), as indicated by the scale on the left. Key residues are highlighted by spheres: N‐terminues at D1 (blue), F19 (magenta), D23 (red), K28 (blue), L34 (magenta), C‐terminus at A42 (red), as indicated in structure H1. (B) Changes in the environment can cause Aβ to adopt folded structures, which, depending on the external conditions, can be either helical or a β‐hairpin conformation. The corresponding PDB ID is provided below each conformation, and relevant residues are indicated. (C) The FES of the Aβ42 dimer in aqueous solution, illustrated as a disconnectivity graph obtained from MD, reveals a folding funnel leading to the β‐hairpin state H2 (which is the same conformation H2 as in Panel A). The RC state is considered an excited state within the FES of the dimer. For further explanations regarding the FES representation, see Panel (A); the number of residues in a β‐hairpin conformation per peptide in the dimer can reach 19. (D) Model of an Aβ42CC hexamer determined by ssNMR. On the left, the superposition of the ten best models (with residues 1–14 excluded) is shown. On the right, a simplified representation of the hexamer topology is provided, along with the numbering of key residue positions. The β‐hairpin corresponds to the conformation obtained from MD for the monomer and dimer (see Panels A and C) and for Aβ40 interacting with an affibody (see Panel B), resulting in an antiparallel β‐sheet signature in the oligomers. Panels A and C were adapted with permission from ref. [21] and Panel D from ref. [22].
Ultimately, both NMR and MD agree that the monomeric Aβ is predominantly disordered, aligning with the secondary structure predictions made by MetaDisorder (Figure 1B). It is important to note that Aβ does not exhibit glass‐like behavior [21, 24], a characteristic that was previously speculated to be present in IDPs [26]. Such behavior would imply a multifunnel FES and switching conformations over extended time scales [26]. It was suggested that the relatively short sequence of Aβ may be insufficient for glass formation, or that the single glutamine residue at position 15 does not provide the necessary stickiness to induce such behavior [24]. However, considering that in the meantime the aromatic tripeptide YYY has been demonstrated to form an amorphous glass involving water molecules [27], the current conclusion is that peptide length is not the limiting factor. Instead, it is rather the sequence that prevents Aβ from forming a glass.
3. Aβ Monomer: Shifts in Environment Induce Diverse Helical and Β‐Hairpin Structures
The excited states of Aβ in aqueous solution at pH ∼7, which feature α‐helical or β‐hairpin structures, may become the most stable conformations upon environmental changes. An examination of the Protein Data Bank (PDB) reveals a predominance of helical Aβ structures determined by solution NMR spectroscopy. Notable examples include the structures with IDs 1IYT for Aβ42 [28], 2LFM for Aβ40 [29], and 1BA4 for Aβ40 [30], all of which are categorized as primarily or partially helical (Figure 2B), consistent with predictions made by various secondary structure prediction methods (Figure 1B). The structure 1IYT was derived from a mixture of 1,1,1,3,3,3‐Hexafluoro‐2‐propanol (HFIP) and water in an 80% HFIP:20% H2O v/v ratio. The hydrogen bonds (H‐bonds) between proteins and HFIP are weaker than those formed with water, which likely promotes intraprotein H‐bonds and facilitated the development of the helical structure in Aβ42. Structure 2LFM was obtained for Aβ40 dissolved in a buffer containing 20 mM potassium phosphate and 50 mM NaCl at pH 7.3, utilizing a 93% H2O/7% D2O solution. Chemical shifts and nuclear Overhauser effects (NOEs) indicated that residues H13 to D23 likely adopt a 310 helical structure, with the terminal residues F4 and G38 packing against the central residues V18/A21 and F19, respectively. This structure formation could be facilitated by the presence of D2O which strengthens the intrapeptide H‐bonds while weakening those between peptide and D2O. The structure 1BA4 was obtained for Aβ40 in a sodium dodecyl sulfate (SDS) solution (90% H2O) at pH 5.1, revealing a helical conformation for the majority of the molecule (residues 15–36), with a kink at residues 25–27 that may function as a hinge between the two helical segments. A similar helix‐kink‐helix structure was identified in another NMR study of Aβ40, conducted in a 100 mM SDS solution with 20 mM sodium phosphate buffer at pH 7–7.6, suggesting that this conformation is robust within SDS micelles [31].
MD simulations revealed a comparable helical structure for Aβ42 when interacting with a lipid cluster [32]. However, these simulations also yielded β‐sheet structures, contingent on the peptide's interactions with the lipids. Interestingly, no monomeric Aβ structures featuring β‐sheets are available in the PDB. However, a recent time‐resolved solid‐state NMR (ssNMR) study, using a combination of rapid mixing to initiate a structural evolution process, rapid freezing to trap intermediate states, and low‐ temperature ssNMR technology with sensitivity enhancements from dynamic nuclear polarization (DNP), identified for Aβ40 a highly populated β‐strand conformation at pH 7.4 before oligomerization occurs [33]. This conformation is U‐shaped or hairpin‐like, bringing the F19 sidechain in proximity with sidechains of L34 and/or M35 (like in conformation H1 in Figure 2A). In another MD simulation study, this β‐hairpin conformation was induced by the presence of a glycosaminoglycan (GAG) molecule, despite a lack of direct intermolecular interactions [34]. There, the β‐hairpin formation appeared to result from descreening of intrapeptide electrostatic interactions, as sodium ions moved away from the peptide toward the negatively charged GAG. A similar β‐hairpin structure was elucidated through solution NMR for Aβ40 while in complex with a phage‐display selected affibody protein, where the hairpin, composed of residues 17–36, is stabilized by enclosing both predominantly nonpolar faces within a large hydrophobic tunnel‐like cavity formed by the affibody (PDB ID 2OTK, Figure 2B) [35].
This examination of monomeric Aβ structures could be further expanded, given the extensive literature on the topic. However, it is sufficient to conclude that subtle environmental changes, such as transitioning from pure H2O to solvent mixtures containing D2O, HFIP, SDS, or other molecules as well as changes in salt concentration, temperature, or peptide concentration influence the sensitive balance between intrapeptide and peptide–environment interactions and can guide the Aβ peptide toward regions of its energy landscape where (partially) folded structures are favored over the RC state.
4. Aβ Oligomers: Anti‐Parallel Beta‐Sheets Upon Self‐Assembly
The disorder‐to‐order transition observed in Aβ under varying solution conditions can also be initiated by the peptide's self‐assembly into oligomers. For instance, over a decade ago, a study combining rapid fluorescence techniques with slower two‐dimensional ssNMR revealed a β‐hairpin structure formed by the strands E11–D23 and K28–V36, with the most notable interaction occurring between F19 and L34, which serves as a key structural motif of Aβ40 oligomers [36]. Recent NMR studies have confirmed such β‐hairpin or U‐shaped structures in Aβ40 oligomers. For example, Barnes et al. conducted solution NMR experiments in which oligomerization of Aβ40 was triggered by a rapid drop in pressure from 2.5 kbar to 1 bar, resulting in oligomer formation in less than 1 s at a concentration of 1.3 mM [37]. This process was accompanied by ordering in residues 16–22 and 29–36. The earlier‐mentioned time‐resolved ssNMR measurements, which identified a β‐hairpin structure for the Aβ40 monomer, highlighted prominent intrapeptide contacts between F19 and L34 (or M35) and interpeptide contacts between V18 and G33, which both form on the millisecond time scale during oligomerization [33]. Additionally, infrared (IR) spectroscopy concluded that these β‐hairpins assemble into antiparallel β‐sheets, showing that Aβ42 oligomers become more homogeneous when the aggregation time increases [38].
Using MD simulations, my lab recently demonstrated how the free energy funnel leading to disorder in the Aβ42 monomer transitions into a folding funnel (Figure 2C), facilitated by the binding of Aβ42 to the hydrophobic region of another Aβ42 peptide [21]. The initial conformational change, which transforms the relatively extended Aβ42 conformation into a hairpin‐like structure, is primarily driven by the formation of a salt bridge between D23 and K28, followed by the establishment of hydrophobic contacts between the strands on either side of the turn, specifically residues L17VFFA21 and A30IIGLMV36. The emergence of these intrapeptide contacts occurs cooperatively with the formation of interpeptide interactions between the hydrophobic regions of both peptides. Once the positions of these hydrophobic contacts are optimized, hydrogen bonds form between the strands, completing the formation of the β‐hairpin. A structure for this β‐hairpin as part of an Aβ hexamer was provided by a ssNMR study of Aβ42CC where alanine residues at positions 21 and 30 were replaced by cysteines, so that a disulfide bond locks the peptide in a conformation that is incompatible with fibril formation and aggregation is therefore arrested at the oligomeric state (Figure 2D)[22, 39].
Based on these findings, there seems to be a consensus that for small oligomers (n‐mers with n < 10), the β‐hairpin structure is a characteristic element of Aβ oligomers. This could lead to the conclusion that the oligomer state of Aβ is less polymorphic than both the monomer and fibrillar states. However, two comments are in place here. First, the assembly of this hairpin can be manifold and also quite disordered [39]. Second, the transient nature of the oligomers makes it very difficult to capture them and elucidate their structure. Hence, it is very likely that other Aβ oligomer structures exist beyond those discussed here, particularly for the larger n‐mers.
5. A β Fibrils: A Zoo of Structures and Interactions
An examination of the PDB reveals a wide variety of fibril structures determined for Aβ40 and Aβ42, predominantly characterized by ssNMR or cryogenic electron microscopy (cryo‐EM). In a recent review, Baek and Lee categorized and described these different fibrils, creating a comprehensive fibril atlas, with their summary figure reproduced here as Figure 3 [40]. The common characteristic of these fibrils is that each protofibril exclusively features parallel β‐sheets. Beyond this commonality, the fibrils exhibit differences in their physical appearance, such as variations in width and helical twists, which arise from differing backbone conformations, sidechain orientations, and interactions among protofibrils. The specific type of fibril structure formed depends on several growth conditions, including the pH and temperature, the application of agitation, whether the fibrils were grown in vitro or extracted from brain samples, and for those grown in vitro, whether they were seeded from existing fibrils and what types of fibrils were used as seeds. Additionally, the presence of any cofactors that may influence fibril growth, either in vitro or within brain tissue, also plays a role.
FIGURE 3.

Aβ fibril structures formed by (A) Aβ40 and (B) Aβ42 (with PDB codes given below the structures). Adapted with permission from ref. [40].
Regarding the residues involved in β‐sheet formation and intra‐ as well as intermolecular contacts, it is not surprising to see the previously mentioned hydrophobic regions L17–A21 and A30–V36, along with the key salt bridge D23–K28, frequently implicated. However, unlike Aβ oligomers, in which these residues appear to be the sole key structural components, some fibrils contain β‐sheets in additional regions, including the N‐terminal region D1–Y10, which was previously thought to be entirely disordered. For example, in the Aβ40 fibril structure with PDB ID 8QN7, the structure is stabilized by electrostatic and polar interactions involving residues H6, S8, E11, H13, and K16 [41]. A salt bridge formed between E11 and K16 stabilizes a turn in the peptide, similar to the D23–K28 interaction often seen further down the sequence. A comprehensive list of all interactions in various fibril structures can be found in the work of Baek and Lee [40].
In comparing the structures of monomers and oligomers of Aβ40 and Aβ42, few differences were observed between the peptides. However, for fibrils, the two additional residues at the C‐terminus of Aβ42 are significant. Not only do they increase the hydrophobicity of the peptide, but they also elongate the peptide, allowing for alternative fibril conformations. These extra residues facilitate a turn in the C‐terminal region between M35 and V39—which can also be found in the monomer (see conformation H2 in Figure 2A and ref. [25])—enabling the formation of S‐shaped fibrils not observed in Aβ40 [40]. This S‐shaped conformation is further stabilized by various hydrophobic interactions involving the C‐terminal residues, as well as electrostatic interactions arising from the negative charge at the C‐terminus of Aβ42. Regardless of whether they are formed by Aβ40, Aβ42, or their mutants, all fibrils share the common feature that two or more protofibrils can pack against each other, involving diverse peptide interfaces.
Further information about the relevance of the different residues for the Aβ fibril formation was obtained from a cell‐based assay, which enabled the massively parallel quantification of how sequence variations affect the peptide aggregation [42]. It revealed that mutations within the hydrophobic C‐terminal region (29–42), particularly residues 33–38, significantly disrupt aggregation, identifying this region as likely central to the nucleation transition state. Conversely, many substitutions in the more IDP‐like N‐terminal region (1–28) accelerated aggregation, especially after introducing polar (N, H, T, Q) or positively charged (K, R) residues. This suggests that reducing Aβ’s net charge promotes aggregation, which is negatively charged at physiological pH. The E22 position is notably significant due to familial mutations such as the Arctic (E22G), Osaka (E22∆), Dutch (E22Q), and Italian (E22K) mutations, which are all linked to early‐onset familial Alzheimer's disease (FAD) and show accelerated aggregation in the assay. Some FAD mutations exhibit distinct structural differences from wild‐type Aβ fibrils connected to sporadic Alzheimer's disease [40]. Uniquely, the Iowa mutation (D23N) results in antiparallel amyloid fibrils (PDB 2LNQ) [43]. While data on mutant oligomer structures are limited, FAD‐linked mutations like E22G are known to markedly enhance oligomer formation [44].
Similar to mutations, pH significantly affects Aβ aggregation by altering electrostatic interactions. A study showed no Aβ42 fibrillization at pH 3.5 and 4.5, whereas the strongest amyloid signals were observed at pH 7.4 and 8.0, with moderate fibrillization at pH 5.6 and 6.5, and slower assembly at pH 5.4 and 9.5 [45]. Notably, amyloid fibril and oligomer formation can be inversely related; a study reported an 8000‐fold increase in Aβ42 oligomerization as pH decreased from 7.4 (extracellular) to 4.8 (endo‐lysosomal), correlating with reduced fibril formation [46]. This is biologically relevant because Aβ accumulates at low pH in neuronal endo‐lysosomal vesicles. Lipids and other co‐factors further influence Aβ aggregation and fibril structures. For example, Aβ can form phospholipid‐containing biomolecular condensates on bilayers, accelerating amyloid nucleation [47]. Cryo‐EM and NMR findings indicate that lipids bind to fibrils when grown with lipids, resulting in structures similar to brain‐ seeded fibrils, highlighting the biological importance of Aβ–lipid interactions [48]. This is further supported by a recent study on the in‐tissue structure of Aβ in fresh post‐mortem AD donor brain [49]. Using various cryo‐EM and cryo‐tomography techniques, a mixture of fibrils and protofilaments in parallel arrays and lattice‐like structures was identified, incorporating non‐amyloid components such as extracellular vesicles, droplets, and open lipid bilayer sheets [49].
The structural diversity observed in Aβ fibrils can only occur if the resulting fibrils possess similar thermodynamic charac‐ teristics. Indeed, free energy calculations of amylin fibrils revealed that all structures considered exhibit similar per‐residue energy scores, making them equally likely from the thermodynamic viewpoint [50]. While thermodynamic stability dictates which structures are feasible, the relative population of each fibril structure is influenced not by its stability but by the rate at which it is formed [50, 51]. This was demonstrated for amylin using cryo‐EM at various time points during in vitro fibrillization [50]. The study found that fibrils formed during the lag, growth, and plateau phases exhibited different structures of similar thermodynamic stability, with new forms appearing and others disappearing as fibrillization progressed. Nonetheless, the final fibril structures observed in this study are somewhat more thermodynamically stable than the earlier ones [50], making them more resistant against fragmentation in the presence of shear forces. Whether the same principles apply to Aβ fibril formation remains to be investigated.
6. Conclusions: Polymorphism and the Energy Landscape of Aβ and Implications for Amyloid Diseases
Aβ is demonstrated to be polymorphic at the levels of the monomer, oligomer, and fibril. Starting with the inherent vagueness of secondary structure predictions, Aβ’s sequence confers the potential to adopt various conformations: it can be disordered— particularly in the N‐terminal half with an IDP‐like amino acid composition—adopt a helical structure in regions 17–21 and 30–34, where hydrophobic residues cluster, or form a β‐hairpin structure enabled by residues 23–28 that facilitate a turn between the hydrophobic stretches, allowing them to adopt strand‐like geometries rather than helical conformations. These different structures are nearly equally probable, and depending on environmental conditions, one conformation may become more favorable than another. This structural indecisiveness, combined with the clustering of hydrophobic residues and potential for various salt bridges, not only allows Aβ to undergo amyloid aggregation but also to adopt numerous fibrillar structures. In summary, akin to a chameleon that changes color based on its environment, Aβ dynamically alters its structure.
The polymorphic nature of Aβ is closely linked to its neurotoxicity and AD development. For small oligomers, toxicity increases with size: dimers are about three times, while trimers and tetramers are 8‐ and 13‐fold more toxic than monomers, correlating with higher β‐sheet content [52]. Notably, antiparallel β‐sheet oligomer, such as those stabilized through the above mentioned Aβ42CC, [22, 39] are exceptionally toxic, being 50 times more neurotoxic than fibrils or wild‐type Aβ42, which only forms transient oligomers [53]. A recent study analyzing soluble Aβ oligomers from eight brain regions revealed diverse sizes and structures, with smaller oligomers (∼2 nm diameter, less than 100 nm in length) from hippocampal extracts showing the highest potency [54]. Their toxicity involves membrane disruption, calcium dysregulation, receptor blockade, and impaired neurotransmission, ultimately leading to synaptic dysfunction [55]. It is important to note that the comparison between synthetic and brain‐derived Aβ oligomers remains an active area of research; differences in receptor binding suggest notable in vivo–in vitro variations [56, 57]. Concerning fibril polymorphism and AD progression, fibrils associated with sporadic Alzheimer's disease tend to exhibit distinct folds and morphologies compared to those linked to early‐onset familial Alzheimer's disease. Additionally, the corresponding amyloid plaque deposits differ in diffusivity, focality, and localization, further influencing their pathogenic roles [58].
Another consequence of the chameleon‐like behavior of Aβ is that this peptide poses a particularly challenging target for therapeutic approaches due to the absence of a definitive structure associated with AD. This complexity helps explain the slow progress in developing drugs for AD [59]. To date, three anti‐Aβ antibodies—Aduhelm (aducanumab), Kisunla (donanemab), and Leqembi (lecanemab)—have been approved by the FDA. While aducanumab and donanemab primarily target fibrils [60], lecanemab has been shown to reduce Aβ protofibrils and is the first to demonstrate slowing of cognitive decline in early‐stage AD [61]. However, these therapies are costly and associated with significant toxic side effects. Consequently, there is ongoing research to develop small molecules capable of clearing Aβ aggregates. Two promising candidates are: ALZ‐801 (homotaurine prodrug, phase 3) [62], which prevents Aβ oligomer formation [63]; and PRI‐002 (all D‐ptlhthnrrrrr peptide, phase 2) [64], which inhibits oligomerization via electrostatic interactions between its five arginines and the E22/D23 region of Aβ, blocking β‐hairpin formation necessary for toxic oligomerization [65].
A hypothesis arising from the structural flexibility of Aβ suggests that the relative ease with which this peptide assumes the (pre)fibrillar state may account for the prevalence of AD once Aβ reaches a critical concentration in the brain, which typically occurs with increasing age. This can be attributed to its relatively flat energy landscape. However, this not only facilitates aggregation but also the dissociation of Aβ aggregates. Moreover, as aggregation appears to be a frequent event, the body can develop mechanisms to counteract such aggregation, such as chaperones [66]. If this were not the case, AD, which progresses over years or even decades, might develop much more rapidly.
In contrast, consider another amyloid disease, such as Creutzfeldt‐Jakob disease (CJD), which, while rare, leads to rapid mortality [67]. The average survival time following a CJD diagnosis is typically only a few months. The prion protein primarily exists in a folded state with α‐helices, accompanied by an unstructured N‐terminal region [68]. Although this flexible, unstructured segment allows for some mobility, the remainder of the prion protein remains stably folded, requiring significant energy to misfold into the amyloid state, where the majority of α‐helices are transformed into β‐sheets [69]. However, once this free energy barrier is overcome, the progression toward the amyloid state appears to follow a steep downhill, nonreversible trajectory in the free energy landscape, as otherwise the fast disease progression could not be explained. Thus, the flatness of the Aβ energy landscape underlying its chameleon‐like behavior presents not only disadvantages but also advantages. This leads me to propose the relationship between the energy landscape and amyloid disease as summarized in Figure 4.
FIGURE 4.

Hypothesis on the relationship between the energy landscape and corresponding amyloid disease. The energy landscapes shown should be interpreted qualitatively rather than quantitatively. Additionally, the exclusion of PrP oligomers in this figure should not be construed as them being irrelevant; this omission is primarily for simplification purposes.
Conflicts of Interest
The authors declare no potential conflicts of interest.
Acknowledgments
The author thanks current and former members of her research group for their scientific input and discussions.
Open access funding enabled and organized by Projekt DEAL.
Strodel B., “Chameleonic Nature of Aβ: Implications for Alzheimer's and Other Amyloid Diseases.” BioEssays 47, no. 9 (2025): 47, e70039. 10.1002/bies.70039
Data Availability Statement
Data sharing is not applicable to this article as no datasets were generated or analyzed during the current study.
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Data Availability Statement
Data sharing is not applicable to this article as no datasets were generated or analyzed during the current study.
