Abstract
Objectives
To inform patient management and disease prevention, we sought to estimate the prevalence of, and identify risk factors for, scrub typhus, murine typhus, and spotted fever group rickettsioses (SFGR) among febrile patients presenting to hospital in Myanmar.
Methods
We recruited patients ≥12 years old with fever ≥38°C among those seeking care at Yangon General Hospital from 5 October 2015 through 4 October 2016. Standardised clinical and risk factor assessments were conducted. Confirmed scrub typhus, murine typhus, and SFGR infections were defined as a positive polymerase chain reaction or ≥4‐fold rise in immunofluorescence assay antibody titre to Orientia tsutsugamushi, Rickettsia typhi or Rickettsia honei or Rickettsia conorii, respectively. Probable infection was defined as IgM titre ≥1:400 to O. tsutsugamushi, an IgM titre of ≥1:800 or IgG ≥1:1600 to R. typhi or an IgG titre of ≥1:200 to R. honeii or R. conorii. Univariate and multivariable logistic regression was used to identify associations.
Results
Among 944 participants, the median (range) age was 37 (12–94) years, 444 (47.0%) were female, and 704 (74.6%) resided in rural areas. Among participants, 63 (6.7%) had confirmed or probable scrub typhus and 15 (1.6%) had confirmed or probable murine typhus. No SFGR infections were identified. The odds of confirmed or probable scrub typhus were lower among females than males (adjusted odds ratio [aOR] 0.5, p = 0.014), lower among those earning >300,000 Kyat per month compared with those earning less than 100,000 Kyat per month (aOR 0.28, p = 0.039), and higher among agricultural workers compared with others (aOR 2.9, p = 0.004).
Conclusion
Scrub typhus was common among patients presenting with fever in Yangon, murine typhus was uncommon, and SFGR was not found. Empiric treatment of severe febrile illness should include an antimicrobial with activity against rickettsial diseases. Public health campaigns targeting agricultural workers are recommended.
Keywords: endemic flea‐borne typhus, epidemiology, fever, Myanmar, Orientia tsutsugamushi, Rickettsia typhi, scrub typhus, spotted fever group rickettsiosis
INTRODUCTION
Rickettsial diseases, or rickettsioses, are among the most common causes of non‐malarial fever in Southeast Asia, where scrub typhus and murine typhus predominate [1]. Spotted fever group rickettsioses (SFGR) have been reported in Southeast Asia and are likely under‐recognised in the region [2, 3].
During World War II, outbreaks of scrub typhus and murine typhus were identified among military personnel stationed in Myanmar [4, 5]. Since then, there have been few publications on non‐malaria febrile illness [1, 6]. A 2004–2006 study of pregnant women on the border of Thailand and Myanmar found that up to 10% of those presenting with fever had confirmed scrub typhus or murine typhus by positive polymerase chain reactions (PCR) or ≥4‐fold rise in serum antibody titres [7]. A seroprevalence study of rickettsial infection in Myanmar on samples collected in 2019 found evidence of recent or past scrub typhus, murine typhus, and SFGR infection in 19%, 5%, and 3% of patients, respectively [8]. Scrub typhus seropositivity was highest in northern Myanmar, and male gender and increasing age were identified as risk factors for scrub typhus seropositivity [8]. Elsewhere in Southeast Asia, living rurally and working in agriculture have been identified as risk factors for scrub typhus seropositivity [9]. Living in an urban environment was associated with murine typhus seropositivity [3, 9]. Livestock exposure has been independently associated with both murine typhus and SFGR seropositivity [3]. Little is known about the prevalence of rickettsial diseases or risk factors for infection among febrile patients presenting to hospitals in Myanmar.
We sought to estimate the prevalence of scrub typhus, murine typhus, and SFGR among febrile participants presenting to Yangon General Hospital (YGH) Yangon, Myanmar; to describe the clinical features of febrile participants with these infections; and to identify risk factors such as sociodemographic and environmental exposures for scrub typhus, murine typhus, and SFGR.
METHODS
Study design
We undertook a prospective observational hospital‐based surveillance study of causes of febrile illness at YGH in Myanmar that examined bloodstream infections, as well as other infectious diseases associated with fever. Detailed study methods have been published elsewhere [10, 11]. A related study estimates the incidence of rickettsial disease in the Yangon Region [11].
Setting
Yangon is the former capital and largest city in Myanmar with a population of 5.16 million and is situated in the Yangon Region [12]. YGH is a 2000‐bedded tertiary referral hospital that provides care to inpatients and outpatients ≥12 years old and receives patients from the community as well as from hospitals throughout the country. Febrile patients are triaged in the Emergency Department for referral to the Medical Observation (MO) Unit for admission or outpatient management.
Participants
Potential participants were identified prospectively among adolescent and adult patients at the MO Unit of YGH from 5 October 2015 through 4 October 2016. Adolescent and adult patients aged ≥12 years were eligible for enrolment if they had an oral temperature of ≥38°C.
Clinical data
A standardised questionnaire was used by trained medical graduates to collect demographic, clinical history, physical examination, and risk factor data from consenting participants. This included data on personal information, residence, including whether they lived rurally, detailed medication history, and environmental, occupational, and animal exposures. Clinical notes were reviewed to collect information on the provisional diagnoses, treatment given in hospital, and discharge outcome including diagnosis and inpatient death. For each participant, the Glasgow Coma Scale (GCS) score [13] and quick Sequential Organ Failure Assessment (qSOFA) score were calculated [14].
Sample collection
Each participant had 15 mL of venous blood collected aseptically. Eight to 10 mL of blood was inoculated into BacT/ALERT FA blood culture bottles (bioMérieux, Inc., Durham, NC, USA), 2 mL of haemoculture fluid (HCF) from negative blood cultures, and 1.5 mL of serum was stored at −70°C. Convalescent serum was collected 14–30 days after admission. Samples were shipped on dry ice to reference laboratories for further testing.
Laboratory methods
Serologic testing for scrub typhus, murine typhus, and SFGR
Serology for the detection of scrub typhus, murine typhus, and SFGR was performed at Mahidol Oxford Tropical Medicine Research Unit (MORU), Bangkok, Thailand. Serum samples at a dilution of 1:100 were first screened by the MORU in‐house ELISA to detect IgM and IgG antibodies against scrub typhus using Orientia tsutsugamushi Gilliam, Karp, Kato, and TA716 antigens; murine typhus using Rickettsia typhi Wilmington strain antigens; and SFGR using Rickettsia conorii and Rickettsia honei antigens [8]. Whole‐cell antigens were used. A net optical density (OD) at 450 nm of ≥0.5 was used as a cut‐off for samples to proceed to indirect immunofluorescence assay (IFA) testing [8].
Samples positive by ELISA screening were serially 2‐fold titrated from 1:100 to 1:25,600 using IFA for O. tsutsugamushi using pooled Gilliam, Karp, Kato, and TA716 antigens; for R. typhi using Wilmington strain antigens; and for SFGR using R. honei and R. conorii antigens. The test was not performed on paired sera with an ELISA IgG static OD or single sera with ELISA IgG levels above the 90th centile of all tested samples in the cohort, as the static paired sera IgG results and high single sera IgG results were most likely due to the presence of antibodies from past infections [15, 16].
Molecular testing for scrub typhus, murine typhus, and SFGR
Nucleic acid amplification tests were performed for scrub typhus, murine typhus, and SFGR on the HCF of participants with negative blood cultures at the Lao‐Oxford‐Mahosot Hospital‐Wellcome Trust Research Unit Vientiane, Lao PDR [10, 17]. Deoxyribonucleic acid was extracted from the HCF sample using QIAGEN Mini kit (QIAGEN, Germany) and tested by real‐time PCR using 47 and 17 kDa gene targets, surface membrane proteins of O. tsutsugamushi and Rickettsia, respectively [18, 19]. Samples with cycle threshold (Ct) values <40 were recorded as positive. Samples positive for 17 kDa underwent PCR testing to the R. typhi‐specific ompB target [20]. The 17 kDa PCR products of 17‐kDa‐positive and ompB‐negative samples were sent for sequencing at Macrogen Korea, Seoul, Republic of Korea to identify Rickettsia spp. other than R. typhi.
Case definitions
Confirmed scrub typhus was defined as a participant with: a ≥4‐fold rise in IFA IgM or IgG titre between acute and convalescent serum; or PCR positive for 47 kDa [21]. Probable scrub typhus was defined as a participant with an acute or convalescent serum IFA IgM titre of ≥1:400 [22]. Scrub typhus exposure, which included confirmed or probable cases, was defined as a participant with: a serum IFA IgG titre of ≥1:100; or PCR positive for 47 kDa [21, 23, 24].
Confirmed murine typhus was defined as a participant with: a ≥4‐fold rise in IFA IgM or IgG titre between acute and convalescent serum; or PCR positive for 17 kDa and R. typhi‐specific ompB gene [21]. Probable murine typhus was defined as a participant with an acute or convalescent serum IFA IgM titre of ≥1:800 or IgG ≥1:1600 [16]. Murine typhus exposure was defined as a participant with: a serum IFA IgG titre of ≥1:100; or PCR positive for 17 kDa and R. typhi‐specific ompB gene [8].
Confirmed SFGR was defined as a participant with a: ≥4‐fold rise in IFA IgM or IgG titre between acute and convalescent sera; or PCR positive for 17‐kDa, negative for R. typhi specific ompB, and sequenced to identify the Rickettsia spp. that was in the SFGR group [25]. Probable SFGR was defined as a participant with an acute or convalescent serum IFA IgG titre of ≥1:200; or PCR positive for 17 kDa and negative for R. typhi specific ompB and not meeting the confirmed case definition [25]. SFGR exposure was defined as a participant with: a serum IFA IgG titre of ≥1:100; or PCR positive for 17 kDa, negative for R. typhi specific ompB and sequenced to identify the Rickettsia spp. that was in the SFGR group [8].
Statistical methods
Demographic and clinical characteristics, clinical management and exposure histories of cases and non‐cases were initially compared using univariate analyses. For binary variables, logistic regression was used to estimate unadjusted odds ratios with 95% confidence intervals and p‐values. For continuous variables, cases and controls were compared using the Hodges–Lehmann median difference with a 95% confidence interval and a Wilcoxon rank sum test [26]. Seasonal variation was assessed by defining two climate periods: the wet period from May through October and the dry period from November through April [27]. The date of presentation was used for inclusion in each period. A high qSOFA score was defined as a value ≥2 [14]. Participants receiving azithromycin or a tetracycline during hospital admission were considered to have received an agent with activity against rickettsioses.
To inform variable selection and model building for scrub typhus, we constructed directed acyclic graphs (DAG) to represent visually causal assumptions using epidemiological, environmental, and demographic variables in our dataset in a browser plugin [28]. We used the DAG to formulate a multivariable risk‐factor model determining the final model through backwards selection and comparison of the Akaike information criterion [29].
Research ethics
The study received ethics approval from Ethics Review Committees of University of Medicine 1, and the Department of Medical Research, Yangon, Myanmar, and the Human Ethics Committee of the University of Otago. We sought and obtained written informed consent from guardians or caregivers for patients aged 12–18 years, those who were illiterate, or were unconscious at presentation. For all others, written consent was sought and obtained from the patient.
RESULTS
Study population, testing, demographics, and clinical data
From 5 October 2015 through 4 October 2016, 37,128 patients were seen at the MO Unit of YGH. Of these patients, 1045 (2.8%) were eligible for inclusion in this study, and 947 (90.6%) consented and were enrolled (Figure 1). Three participants did not undergo any serological or PCR testing and were excluded from the analysis (Figure 1). Of 944 participants, 6 (0.6%) had no serological testing but had PCR testing and were included in the analysis. Of 938 participants who underwent serological testing, 367 (39.1%) had paired serum collected, and 571 (60.9%) had single serum alone collected. Of 944 participants, 690 (73.1%) culture‐negative HCF underwent PCR testing. Of 254 without PCR testing, 86 (33.9%) had paired serum collected. The demographic and clinical characteristics comparing participants with and without paired serum and with and without PCR testing are shown in Tables S1 and S2, respectively.
FIGURE 1.
Study enrolment flow diagram, Yangon General Hospital, Myanmar, 2015–2016.
The median (range) age of the 944 participants was 37 (12–94) years, 444 participants (47.0%) were female and 704 (74.6%) lived in rural areas. The region of residence was Yangon Region for 671 (71.0%), Ayeyarwady Region for 107 (11.3%) and Bago Region for 102 (10.8%). Of the 944 participants, 928 (98.3%) were admitted to YGH, and 16 (1.7%) were treated as outpatients. No participants received an admission or discharge diagnosis of murine typhus, scrub typhus, or SFGR. Vital outcome data were missing for 38 (4.0%) of 944 participants.
Scrub typhus
Of the 944 participants, 63 (6.7%) met the case definition for confirmed or probable scrub typhus; 37 of the 63 (58.7%) were confirmed cases, and 26 (41.2%) were probable cases. Of the 63 participants with confirmed or probable scrub typhus, 26 (41.3%) were diagnosed by PCR, 37 (58.7%) by serology, including 11 (17.5%) by both methods. Of the 944 participants, 85 (9.0%) met the case definition for scrub typhus exposure.
The findings of the univariate analyses are shown in Table 1. Of the 63 participants with confirmed or probable scrub typhus, 61 had mortality data available; two (3.3%) died compared to 62 (7.3%) of 881 participants without confirmed or probable scrub typhus and mortality data available (OR 0.43, p = 0.246). On multivariable analysis, being an agricultural worker (adjusted OR 3.9, p < 0.001) was associated with confirmed or probable scrub typhus. Being female (aOR 0.50, p = 0.014) and earning more than 300,000 Kyat per month (aOR 0.28, p = 0.039) was inversely associated with confirmed or probable scrub typhus (Table 2). The multivariable analysis for scrub typhus exposure is shown in Table 3.
TABLE 1.
Features of febrile participants with and without confirmed or probable scrub typhus, and with and without scrub typhus exposure, Yangon General Hospital, Myanmar, 2015–2016.
Confirmed or probable scrub typhus, N = 63 | Not confirmed nor probable scrub typhus, N = 881 | Scrub typhus exposure, N = 85 | No scrub typhus exposure, N = 859 | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Variable | n/N | (%) | n/Nn | (%) | OR | (95%CI) | p‐value a | n | (%) | n | (%) | OR | (95%CI) | p‐value a |
Demographics | ||||||||||||||
Age, median (range) years | 33 | (13 to 75) | 388 | (12 to 94) | 2.0 | (−2 to 7) | 0.344 | 33 | (13 to 75) | 38 | (12 to 94) | 3 | (0 to 7) | 0.112 |
Female sex | 20 | (31.8) | 426 | (48.1) | 0.50 | (0.29 to 0.87) | 0.013 | 23 | (37.7) | 412 | (48.0) | 0.66 | (0.41 to 1.0) | 0.071 |
Presents during wet season b | 34 | (54.0) | 489 | (55.5) | 0.94 | (0.56 to 1.6) | 0.813 | |||||||
Rural | 54 | (85.7) | 650 | (73.8) | 2.1 | (1.04 to 4.4) | 0.040 | 72 | (84.7) | 632 | (73.6) | 2.0 | (1.1 to 3.7) | 0.027 |
Agriculture worker | 15 | (23.8) | 59 | (6.7) | 4.4 | (2.3 to 8.2) | <0.001 | 20 | (23.5) | 54 | (6.3) | 4.6 | (2.6 to 8.1) | <0.001 |
Income per month, Kyat c | ||||||||||||||
<100,000 | 30 | (47.6) | 332 | (37.7) | Ref | Ref | 43 | (50.6) | 319 | (37.1) | Ref | Ref | ||
100,000 to 300,000 | 30 | (47.6) | 417 | (47.3) | 0.80 | (0.47 to 1.3) | 0.396 | 36 | (42.4) | 411 | (47.9) | 0.65 | (0.41 to 1.0) | 0.070 |
>300,000 | 3 | (4.8) | 132 | (15.0) | 0.25 | (0.08 to 0.83) | 0.025 | 6 | (7.1) | 129 | (15.0) | 0.35 | (0.14 to 0.83) | 0.018 |
Presenting symptoms | ||||||||||||||
Days unwell prior to presentation, median (range) | 10 | (1 to 60) | 77 | (1 to 365) | −3 | (−4 to −1) | 0.004 | |||||||
Days fever prior to presentation, median (range) | 10 | (1 to 25) | 55 | (1 to 30) | −3 | (−4 to −1) | <0.001 | |||||||
Chills and rigours | 28 | (44.4) | 397 | (45.1) | 0.98 | (0.58 to 1.6) | 0.924 | |||||||
Cough | 21 | (33.3) | 259 | (29.4) | 1.2 | (0.70 to 2.1) | 0.509 | |||||||
Headache | 31 | (49.2) | 371 | (42.1) | 1.3 | (0.80 to 2.2) | 0.273 | |||||||
Fever ≥1 month | 5 | (7.9) | 186 | (21.1) | 0.32 | (0.13 to 0.8) | 0.017 | |||||||
Presenting signs | ||||||||||||||
Conjunctival suffusion | 6 | (9.5) | 16 | (1.8) | 5.7 | (2.1 to 15.1) | <0.001 | |||||||
Eschar | 0 | 00 | ||||||||||||
Rash | 3 | (4.8) | 42 | (4.8) | 1.0 | (0.30 to 3.3) | 0.998 | |||||||
Lymphadenopathy | 1 | (1.6) | 26 | (3.0) | 0.5 | (0.07 to 4.0) | 0.537 | |||||||
Heart rate (median), BPM (range) | 100 | (28 to 120) | 98 | (50 to 170) | 0 | (−2 to 2) | 0.857 | |||||||
Lung crepitations | 3 | (4.8) | 70 | (8.0) | 0.58 | (0.18 to 1.9) | 0.367 | |||||||
Hepatomegaly | 3 | (4.8) | 49 | (5.6) | 0.85 | (0.26 to 2.8) | 0.788 | |||||||
Splenomegaly | 1 | (1.6) | 23 | (2.6) | 0.60 | (0.08 to 4.5) | 0.622 | |||||||
Meningism | 1/63 | (1.6) | 23/879 | (2.6) | 0.60 | (0.08 to 4.5) | 0.620 | |||||||
Environment | ||||||||||||||
Rodents around house | 20 | (31.8) | 216 | (24.4) | 1.4 | (0.83 to 2.5) | 0.197 | 31 | (36.5) | 204 | (23.8) | 1.8 | (1.2 to 3.0) | 0.011 |
Rodent exposure at work | 8 | (12.7) | 32 | (3.6) | 3.9 | (1.70 to 8.8) | 0.001 | 12 | (14.1) | 28 | (3.3) | 4.9 | (2.4 to 10.0) | <0.001 |
Rodent exposure last month | 5 | (7.9) | 40 | (4.5) | 1.8 | (0.69 to 4.8) | 0.228 | 9 | (10.6) | 36 | (4.2) | 2.7 | (1.3 to 5.8) | 0.011 |
Livestock contact last month | 11 | (17.5) | 65 | (7.4) | 2.7 | (1.3 to 5.3) | 0.006 | 18 | (21.2) | 58 | (6.8) | 3.7 | (2.1 to 6.7) | <0.001 |
Walking barefoot last month | 10 | (15.9) | 52 | (5.9) | 3.0 | (1.5 to 6.3) | 0.003 | 13 | (15.3) | 49 | (5.7) | 3.0 | (1.6 to 5.8) | 0.001 |
Insect bite last month | 0 | (0) | 7 | (0.8) | 0 | (0) | 7 | (0.8) | ||||||
Insect bite mark last month | 1 | (1.6) | 5 | (0.6) | 2.8 | (0.33 to 24.6) | 0.346 | 2 | (2.4) | 4 | (0.5) | 5.2 | (0.93 to 28.5) | 0.061 |
Clinical management | ||||||||||||||
Received doxycycline | 0 | (0) | 2 | (0.2) | ||||||||||
Received azithromycin | 11 | (17.5) | 117 | (13.3) | 1.4 | (0.70 to 2.7) | 0.351 | |||||||
Mortality | 2/61 | (3.3) | 62/845 | (7.3) | 0.43 | (0.10 to 1.8) | 0.246 |
Abbreviations: BPM, beats per minute; CI, confidence interval; OR, odds ratio.
For continuous variables, the difference of the median is shown, the test of significance is Wilcoxon rank sum, otherwise, the odds ratio and p‐value are by univariate logistic regression.
Wet season defined as November to April.
Equivalent in USD to <76.63, 73.63–220.89 and >220.89 in 2015 [30].
TABLE 2.
Final multivariable logistic regression model of risk factors for confirmed or probable scrub typhus among febrile participants (n = 944), Yangon General Hospital, Myanmar 2015–2016.
Variables | Multivariable OR | (95% CI) | p‐value |
---|---|---|---|
Epidemiological/environmental | |||
Female sex | 0.5 | (0.29–0.88) | 0.014 |
Agricultural worker | 3.9 | (2.0–7.3) | <0.001 |
Income per month, Kyat a | |||
<100,000 | Ref | Ref | Ref |
100,000–300,000 | 0.78 | (0.46–1.3) | 0.376 |
>300,000 | 0.28 | (0.08–0.93) | 0.039 |
Abbreviations: CI, confidence interval; OR, odds ratio.
Equivalent in USD to <76.63, 73.63–220.89 and >220.89 in 2015 [30].
TABLE 3.
Final multivariable logistic regression model of risk factors for scrub typhus exposure among febrile participants (n = 944), Yangon General Hospital, Myanmar 2015–2016.
Variables | Multivariable OR | (95% CI) | p‐value |
---|---|---|---|
Epidemiological/environmental | |||
Age | 0.99 | (0.98–1.0) | 0.084 |
Female sex | 0.68 | (0.42–1.0) | 0.104 |
Agricultural worker | 3.3 | (1.7–6.2) | <0.001 |
Rodent exposure at work | 2.4 | (1.1–5.5) | 0.035 |
Income per month, Kyat a | |||
<100,000 | Ref | Ref | Ref |
100,000–300,000 | 0.64 | (0.39–1.0) | 0.066 |
>300,000 | 0.39 | (0.16–0.97) | 0.042 |
Abbreviations: CI, confidence interval; OR, odds ratio.
Equivalent in USD to <76.63, 73.63–220.89 and >220.89 in 2015 [30].
Murine typhus
Of 944 participants, 15 (1.6%) met the case definition for confirmed or probable murine typhus, 8 of the 15 (53.3%) were confirmed cases and 7 (46.7%) probable cases. Five of the 15 (33.3%) were diagnosed by PCR, 10 (66.7%) by serology, and none by both methods. Of the 944 participants, 35 (3.7%) met the case definition for murine typhus exposure. Of 15 participants with confirmed or probable murine typhus, 14 had mortality data; three (21.4%) died compared to 62 (6.8%) of 892 of those without confirmed or probable murine typhus (OR 3.7, p = 0.048). The reported causes of death for the three decedents were: systemic lupus erythematosus with nephropathy; acute viral illness; and severe aplastic anaemia.
The findings of the univariate analysis for murine typhus are shown in Table 4. No factors were found to be associated with murine typhus, but confidence intervals were wide due to the small numbers of cases. The odds of murine typhus exposure were lower among participants who lived rurally than those who did not (OR 0.50, p = 0.048).
TABLE 4.
Features of febrile participants with and without confirmed or probable murine typhus, and with and without murine typhus exposure, Yangon General Hospital, Myanmar, 2015–2016.
Variable | Confirmed or probable murine typhus | Not confirmed nor probable murine typhus | Murine typhus exposure | No murine typhus exposure | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N = 15 | N = 929 | N = 35 | N = 909 | |||||||||||
n/N | (%) | n/N | (%) | OR | (95% CI) | p‐value a | n/N | (%) | n/N | (%) | OR | (95% CI) | p‐value a | |
Demographics | ||||||||||||||
Age, median (range) years | 45 | (14 to 72) | 37 | (12 to 94) | −1 | (−9 to 8) | 0.876 | 42 | (14 to 83) | 37 | (12 to 94) | |||
Female sex | 7 | (46.7) | 437 | (47.0) | 0.99 | (0.35 to 2.7) | 0.973 | 16/35 | (35.7) | 428 | (47.1) | 0.95 | (0.48 to 1.9) | 0.873 |
Presents during wet season b | 6 | (40.0) | 517 | (55.7) | 0.53 | (0.19 to 1.5) | 0.233 | |||||||
Rural | 9 | (60.0) | 697 | (74.8) | 0.51 | (0.18 to 1.4) | 0.200 | 21/35 | (60.0) | 683 | (75.1) | 0.5 | (0.25 to 0.99) | 0.048 |
Agriculture worker | 1 | (6.7) | 73 | (7.9) | 0.84 | (0.11 to 6.5) | 0.865 | 1 | (2.9) | 73 | (8.0) | 0.34 | (0.05 to 2.5) | 0.287 |
Income per month, Kyat c | ||||||||||||||
<100,000 | 4 | (26.7) | 358 | (38.5) | Ref | Ref | 13 | (37.1) | 349 | (38.4) | Ref | Ref | ||
100,000 to 300,000 | 9 | (60) | 438 | (47.2) | 1.8 | (0.56 to 6.0) | 0.314 | 14 | (40.0) | 433 | (47.6) | 0.87 | (0.40 to 1.9) | 0.718 |
>300,000 | 2 | (13.3) | 133 | (14.3) | 1.3 | (0.24 to 7.4) | 0.733 | 8 | (22.9) | 127 | (14.0) | 1.7 | (0.68 to 4.2) | 0.255 |
Presenting symptoms | ||||||||||||||
Days unwell prior to presentation, median (range) | 8 | (1 to 30) | 7 | (1 to 365) | −1 | (−4 to 2) | 0.467 | |||||||
Days fever prior to presentation, median (range) | 7 | (1 to 25) | 5 | (1 to 30) | −2 | (−4 to 0) | 0.074 | |||||||
Chills and rigours | 10 | (66.7) | 415 | (44.7) | 2.5 | (0.84 to 7.3) | 0.103 | |||||||
Cough | 5 | (33.3) | 275 | (29.6) | 1.2 | (0.40 to 3.5) | 0.748 | |||||||
Headache | 7 | (46.7) | 395 | (42.5) | 1.2 | (0.43 to 3.3) | 0.752 | |||||||
Fever ≥1 month | 0 | (0) | 191 | (20.6) | ||||||||||
Presenting signs | ||||||||||||||
Conjunctival suffusion | 1 | (6.7) | 21 | (2.3) | 3.1 | (0.39 to 24.6) | 0.285 | |||||||
Eschar | 0 | 0 | ||||||||||||
Rash | 1 | (6.7) | 44 | (4.7) | 1.4 | (0.18 to 11.2) | 0.727 | |||||||
Lymphadenopathy | 0 | (0) | 27 | (2.9) | ||||||||||
Heart rate (median), BPM (range) | 100 | (82 to 130) | 98 | (28 to 170) | 0 | (−9 to 7) | 0.715 | |||||||
Lung crepitations | 0 | (0) | 73 | (7.9) | ||||||||||
Hepatomegaly | 0 | (0) | 52 | (5.6) | ||||||||||
Splenomegaly | 0 | (0) | 24 | (2.6) | ||||||||||
Meningism | 0/15 | (0) | 24/927 | (2.6) | ||||||||||
Environment | ||||||||||||||
Rodents around house | 5 | (33.3) | 230 | (24.8) | 1.5 | (0.51 to 4.5) | 0.449 | 8 | (22.9) | 227 | (25.0) | 0.89 | (0.40 to 2.0) | 0.777 |
Rodent exposure at work | 2 | (13.3) | 38 | (4.1) | 3.6 | (0.79 to 16.6) | 0.099 | 2 | (5.7) | 38 | (4.2) | 1.4 | (0.32 to 6.0) | 0.66 |
Rodent exposure last month | 2 | (13.3) | 43 | (4.6) | 3.2 | (0.69 to 14.5) | 0.137 | 3 | (8.6) | 42 | (4.6) | 1.9 | (0.57 to 6.6) | 0.29 |
Livestock contact last month | 1 | (6.7) | 75 | (8.1) | 0.81 | (0.11 to 6.3) | 0.843 | 1 | (2.9) | 75 | (8.3) | 0.33 | (0.04 to 2.4) | 0.274 |
Walking barefoot last month | 0 | (0) | 62 | (6.7) | 0 | (0) | 62 | (6.8) | ||||||
Insect bite last month | 0 | (0) | 7 | (0.8) | 0 | (0) | 7 | (0.8) | ||||||
Insect bite mark last month | 0 | (0) | 6 | (0.7) | 0 | (0) | 6 | (0.7) | ||||||
Clinical management | ||||||||||||||
Received doxycycline | 0 | (0) | 2 | (0.2) | ||||||||||
Received azithromycin | 0 | (0) | 128 | (13.8) | ||||||||||
Mortality | 3/14 | (21.4) | 62/892 | (6.8) | 3.7 | (1.0 to 13.7) | 0.048 |
Abbreviations: BPM, beats per minute; CI, confidence interval; OR, odds ratio.
For continuous variables, the difference of median is shown, the test of significance is Wilcoxon rank sum; otherwise, the odds ratio and p‐value are provided by univariate logistic regression.
Wet season defined as May to October.
Equivalent in USD to <76.63, 73.63–220.89 and >220.89 in 2015 [30].
Scrub and murine typhus coinfection
Of 944 participants, four (0.4%) met the case definition for both confirmed scrub typhus and confirmed murine typhus. Scrub typhus was diagnosed by PCR in three and by serology in one. Murine typhus was diagnosed in all four by PCR. Of the three coinfections with mortality data available, one (33.3%) died.
Spotted fever group rickettsioses
No participants met the case definition for confirmed SFGR. No 17 kDa‐positive and ompB‐negative samples had sufficient target concentration for successful sequencing. Five participants met the case definition for probable SFGR, all of which were diagnosed by PCR.
DISCUSSION
We found that scrub typhus was a common cause of severe febrile illness, murine typhus was an uncommon cause, and no SFGR was identified among patients presenting with fever to YGH, Myanmar. Our study and a recent estimate of the incidence of scrub typhus and murine typhus in the Yangon region will contribute to understanding the burden and risk of these infections in Myanmar [11]. For scrub typhus, being female and earning more than 300,000 Kyat per month were associated with lower odds of disease, while being an agricultural worker was associated with higher odds of disease. For murine typhus exposure, living rurally had lower odds of infection. Notably, no participant was provisionally diagnosed or specifically treated for scrub typhus or murine typhus infection.
Our findings are consistent with those from countries neighbouring Myanmar. In a 2008–13 study of patients presenting to provincial hospitals with fever in Laos, using PCR and culture, 6.5% of patients were diagnosed with scrub typhus, and 0.5% with murine typhus [19]. Murine typhus, representing 6% of diagnoses in febrile participants in a study on the Thailand–Myanmar border, perhaps due to the outpatient setting of the study site where murine typhus, a milder illness than scrub typhus, may be more common [7]. Notably, the same study showed a similar prevalence of confirmed scrub typhus and murine typhus coinfection to that found at YGH. A 2013 review [31] identified four other instances of scrub typhus and murine typhus coinfection diagnosed using rigorous criteria of PCR or ≥4‐fold rise in IFA titre in China [32] and Laos [31]. Given the rigour of diagnostic methods, these likely represent true coinfections.
We identified just five probable SFGR infections in our study, all diagnosed by PCR. While SFGR is present [2, 8], our ability to detect SFGR may have been influenced by an unvalidated screening ELISA prior to IFA [33, 34]. Furthermore, low target concentration precluded sequencing of 17 kDa positive and R. typhi specific ompB negative samples, affecting our ability to speciate to the SFGR group.
For confirmed or probable scrub typhus, conjunctival suffusion was the only clinical sign associated with the disease [35]. Since conjunctival suffusion is also associated with a range of other febrile illnesses common in the study area, including leptospirosis, its diagnostic value is limited. No participants in our study had an eschar identified by the study team. This may be because the prevalence of eschar in scrub typhus is highly variable, including as low as 1% [36], or because they were overlooked despite the training of the clinical research team [37]. No presenting symptoms or signs were associated with confirmed or probable murine typhus, possibly related to the limited power due to the small number of cases in our study.
None of the participants in our study with scrub typhus and murine typhus were treated with doxycycline. The US Centers for Disease Control and Prevention recommends doxycycline as the first‐line treatment for both diseases [21]. Only 21.1% of confirmed cases of scrub typhus and 17.5% of confirmed or probable cases of scrub typhus received azithromycin, an effective alternative to doxycycline [38]. Azithromycin was almost always given in conjunction with other antimicrobials. The inclusion of doxycycline or azithromycin in combination with other empiric antimicrobials for severe febrile illness would ensure that there is coverage for scrub typhus in locations where scrub typhus is common. Of participants with confirmed or probable scrub typhus, 3.3% died, compared to the untreated mortality of 6.0% described in a systematic review [39]. No participants with murine typhus received azithromycin, a less effective agent for murine typhus than doxycycline [40]. Mortality associated with murine typhus was notably higher in our study than the 0.4% reported in the literature [41], perhaps due to co‐morbidities.
Despite our study being conducted in a hospital in the centre of Myanmar's largest city, most participants were from rural areas, and 29% were not from the Yangon Region. For scrub typhus, our univariate analysis findings are consistent with other research showing that living rurally is a risk factor for the disease [9]. Occupational exposure, in particular farming or agricultural work, has been linked to scrub typhus in many countries, including China, Laos, South Korea, and Thailand [9, 36]. Gender may be a surrogate for occupational exposures that vary from country to country [3, 37, 42]. In the multivariable analysis, high family income was protective for confirmed or probable scrub typhus. A 2010 community seroprevalence study in Vientiane City, Laos, found that low household income was an independent risk factor for scrub typhus seropositivity [9]. In the same study, poor sanitary conditions appeared to be an independent risk factor for scrub typhus [9]. Further research is needed to fully elucidate the connection between poverty and scrub typhus.
The findings from our univariate analysis were in keeping with previous research. Seeing rodents, the hosts of mites that are the main reservoir of scrub typhus, around the house, at work, or within the last month were all associated with scrub typhus exposure. Livestock exposure was also associated with scrub typhus exposure, which is consistent with findings from South Korea [43]. Livestock themselves are not thought to have a direct role in the lifecycle of O. tsutsugamushi, but animal fodder might attract rodents [44]. Walking barefoot may also increase the risk of mite attachment and feeding, leading to scrub typhus infection. In our univariate analysis, the odds of murine typhus exposure were significantly lower among those from rural areas than in non‐rural areas. This is consistent with research from both Laos and Thailand [3, 9].
Key limitations of our study include concerns for generalisability. We enrolled participants presenting to a tertiary hospital in a major city. As such, participants may not be representative of the general population in Myanmar. Only 38.8% of enrolled participants returned for convalescent serum collection, so comparison groups may have been contaminated by undiagnosed cases. While demographic characteristics were similar between those with and without paired serum, there were differences in some domains that may be a source of bias (Table S1). The testing strategy of excluding participants from IFA testing if a high or static IgG titre was detected by ELISA also limited our ability to diagnose cases of exposure. Mortality data were not available for all participants, and we relied on clinical records to establish causes of death. The diagnosis of rickettsial diseases is particularly difficult in participants who do not provide convalescent serum, as both PCR and acute serology have poor sensitivity [45]. Without an autopsy, mortality attributable to scrub typhus and murine typhus is likely underestimated.
We demonstrated that scrub typhus was a common cause of fever in patients presenting to hospital in Yangon and was associated with being an agriculture worker. Both being female and having a high income were protective for scrub typhus. We found scrub typhus difficult to predict based on clinical characteristics and environmental exposures. To avert fatal outcomes, we suggest the use of doxycycline or azithromycin in combination with other antimicrobials for empiric treatment of patients presenting with severe febrile illness or sepsis in Myanmar. Murine typhus appears to be uncommon among patients admitted to YGH, and no SFGR were identified. Scrub typhus preventive efforts could focus on agricultural workers increasing awareness of arthropod bites, avoiding vegetation favourable to mites, and using covered footwear, insect repellents, and permethrin‐treated clothing when possible [46]. The epidemiology of murine typhus remains poorly understood, and due to the milder nature of many infections, community‐based studies may be better suited to identify risk factors for infection and disease.
CONFLICT OF INTEREST STATEMENT
The authors declare no conflicts of interest.
Supporting information
Table S1. Comparison of clinical characteristics and environmental exposures between participants with and without paired serum for antibody testing for rickettsial diseases, Yangon General Hospital, Myanmar, 2015–2016.
Table S2. Comparison of clinical characteristics and environmental exposures between participants with and without PCR testing for rickettsial diseases, Yangon General Hospital, Myanmar, 2015–2016.
ACKNOWLEDGEMENTS
We would like to thank all participants of this study. We thank team members of the YGH febrile illness study: specifically to Dr. Khine Mar Htun, Dr. Khin Khin Kyourk, Dr. Su Hnin Aung, Dr. Su Htet Aung, Dr. Su Myat Aye, Dr. Sai Nay Linn Htet, Dr. Si Thu Sein Win, Dr. Htet Htet Lin, Dr. Htet Htet Lwin, Dr. Win Thit Lwin, Dr. Lin Thit Lwin, and Dr. Hein Htet Aung for sample collection; staff of the Clinical Microbiology Laboratory Section, Yangon General Hospital. We thank Dr. Khwar Nyo Zin, Consultant Microbiologist, Clinical Microbiology Laboratory, YGH for her kind offer to let us use her laboratory facilities. We thank laboratory staff from Mahidol Oxford Tropical Medicine Research Unit, Bangkok, and the Lao‐Oxford‐Mahosot Hospital‐Wellcome Trust Research Unit, Vientiane, Lao PDR for their kind assistance and sharing their expertise with laboratory work. This work was supported by the New Zealand Health Research Council through an e‐ASIA Joint Research Programme (Grant 16/697), and an Otago Medical School Collaborative Research Grant, University of Otago, New Zealand. TRB received support through a University of Otago Frances Cotter Scholarship and the University of Otago Postgraduate Publishing Bursary (Master's), and TOM and WTO received support through the University of Otago Doctoral Scholarship. JAC also received support from the Bill & Melinda Gates Foundation OPP1151153. This research was funded in whole, or in part, by the Wellcome Trust (220211). The funders had no role in study design, data collection and analysis, decision to publish or preparation of the manuscript. Open access publishing facilitated by University of Otago, as part of the Wiley ‐ University of Otago agreement via the Council of Australian University Librarians.
Bowhay TR, Myat TO, Oo WT, Mone HK, Sharples KJ, Robinson MT, et al. Prevalence and risk factors for murine typhus, scrub typhus and spotted fever group rickettsioses among adolescent and adult patients presenting to Yangon General Hospital, Yangon, Myanmar. Trop Med Int Health. 2025;30(9):966–977. 10.1111/tmi.70009
This study was presented in part at the Otago Global Health Institute Annual Conference 2022, Dunedin, New Zealand, 15‐16 November 2022.
Sustainable Development Goal: Good Health and Wellbeing
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Table S1. Comparison of clinical characteristics and environmental exposures between participants with and without paired serum for antibody testing for rickettsial diseases, Yangon General Hospital, Myanmar, 2015–2016.
Table S2. Comparison of clinical characteristics and environmental exposures between participants with and without PCR testing for rickettsial diseases, Yangon General Hospital, Myanmar, 2015–2016.