BIOPHYSICS. For the article “Tryptophan zippers: Stable, monomeric β-hairpins,” by Andrea G. Cochran, Nicholas J. Skelton, and Melissa A. Starovasnik, which appeared in number 10, May 8, 2001, of Proc. Natl. Acad. Sci. USA (98, 5578–5583; First Published May 1, 2001; 10.1073/pnas.091100898), the authors note the following. Quantitative analysis of the 1H chemical shifts using the Sander module of AMBER 6.0 reveals that the frequencies of the Hβ and Hɛ3 resonances of Trp4 and Trp11 (for trpzips 1 and 2) and Trp5 and Trp14 (for trpzip4) are inconsistent with the side chain orientations previously determined. Instead, refinement of the structures based not only on NOE-derived distance restraints and dihedral angle restraints, but also on 1H chemical shift-based restraints, indicates that the side chains for these residues actually reside primarily in the 180° χ1 rotamer well, not the −60° rotamer previously indicated. Refined coordinates are available in the Protein Data Bank, www.rcsb.org [PDB ID codes 1LE0 (trpzip1), 1LE1 (trpzip2), and 1LE3 (trpzip4)]. The updated coordinates are very similar to those determined previously; as before, for all three peptides, the two strands are highly twisted. The important difference, however, is that each pair of cross-strand tryptophan rings now shows edge-to-face packing against one another (see Fig. 1) that is conserved among all three trpzip peptides regardless of turn-type.
Figure 1.
Representative structure of trpzip1 refined using 1H chemical shift-based restraints. Edge-to-face packing is observed for Trp11/Trp2 and Trp4/Trp9 cross-strand pairs.

