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. 2025 Oct 7;19(10):e0013556. doi: 10.1371/journal.pntd.0013556

Designing a multidimensional vulnerability index for supervising dengue cases from 2015 to 2020 in a low/middle-income country: A spatial principal component analysis

Sergio Moreno-López 1,2,*, Lucia C Pérez-Herrera 2,3,4, Augusto Peñaranda 2,4,5
Editor: Clarence Mang'era6
PMCID: PMC12517521  PMID: 41056345

Abstract

Background

Dengue is one of the most prevalent infectious diseases worldwide, affecting around 390 million people each year. Previous studies have reported that social, climatic, and government-related conditions can increase the frequency of dengue events in some territories. This study aimed to design a multidimensional vulnerability index encompassing social, climatic, and government-related factors associated with dengue and correlate this index with dengue incidence in Colombia between 2015 and 2020.

Methods

Observational, ecological, longitudinal study conducted from 2015 to 2020. Based on administrative data from state sources such as the Ministry of Health, the National Administrative Department of Statistics (DANE), the National Planning Department (DNP), and other sources, a principal component analysis was performed to design the multidimensional vulnerability index.

Results

Data from 1099 municipalities over the six-year analysis period were included. The index comprised five main factors: climatic factors, basic service coverage, precipitation-related factors, municipal performance, and transparency in social development. The proposed index showed a mean vulnerability of 0.48 (median = 0.48; SD = 0.15; IQR: 0.36-0.59). Higher index values were found in the southwestern territories and the Amazon regions of Colombia, as well as some municipalities in the Caribbean region. These territories exhibited the highest levels of poverty, regional access to services, precipitation, and temperature. Spatial analyses confirmed this concordance. The nonlinear association between the MVI and dengue incidence suggests threshold effects, in which municipalities with MVI scores above 0.8 have higher levels of dengue morbidity.

Conclusions

The proposed index showed a suitable correlation with dengue case frequency at a regional level and could be extended to other countries for the development of dengue outbreak prevention campaigns.

Author summary

Dengue is a mosquito-borne viral disease causing millions of infections each year, with significant health impacts in low- and middle-income countries. Vulnerability to dengue increases in settings with poor access to basic services, poverty, under-resourced public health, and limited capacity of institutions to prevent and respond to disease outbreaks. Moreover, environmental factors like high temperatures and rainfall create habitats favoring the growth of mosquitoes that transmit the disease. In this study, the authors designed a Multidimensional Vulnerability Index to measure how these combinations of climatic, social, and governance-related factors influence the risk of dengue outbreaks. Using data from over 1,000 Colombian municipalities between 2015 and 2020, the authors found that areas with higher index scores, especially in the Amazon, Pacific, and Caribbean regions, had higher numbers of reported dengue cases. As climate change raises global temperatures and expands the habitats of dengue-carrying mosquitoes, dengue may emerge in countries and regions where it was not previously a public health concern. The proposed index may serve as a valuable tool for identifying high-risk areas and supporting targeted prevention strategies. While developed in the Colombian context, the framework can be adapted to other countries facing challenges of infectious disease risk and social vulnerability.

Introduction

The World Health Organization (WHO) estimates that 3.9 billion people in 128 countries are at risk of infection with dengue virus [1]. Furthermore, around 390 million infections (95% CI: 284–528 million) are estimated per year, of which 96 million (67–136 million) have clinical manifestations and an associated mortality rate of 2.5% [2,3]. These statistics are particularly important, in terms of public health, considering the expanding range of vectors, linked to climate change, and the socio-economic vulnerabilities of at-risk populations [4,5]. Moreover, the incidence of the disease has increased worldwide, leading to a higher burden on healthcare systems, particularly in low- to middle-income countries (LMICs) [1,6]. Furthermore, social, economic, physical, and environmental conditions can modify the epidemiological risk and lead to a higher incidence of infectious diseases in LMICs [7].

Prior studies have documented the impact of different types of vulnerability on the epidemiology of dengue [8,9]. The concept of “vulnerability” refers to the net balance of risk effects and protective and healing factors (socially, biologically and in terms of health literacy and health care access) arising from natural or anthropogenic events [10,11]. Such vulnerability can be exacerbated by social, political, and economic changes that interact at both local and international levels [12]. It has been reported that socio-economic vulnerabilities are associated with a higher frequency of communicable infectious diseases [9,13,14]. Thus, scenarios of social inequality, unequal income distribution, high migration rates, housing deficiencies, limited access to public services and health prevention programs can be considered as conducive environments for increased dengue transmission [9,1315]. In LMICs from Latin America, the lack of access to safe drinking water and sanitation services significantly impacts dengue transmission as well [16,17]. The use of non-potable water sources and their storage methods have increased dengue transmission in Latin American countries [16,1821]. Moreover, institutional inefficiency and lack of transparency in basic service coverage exacerbate this situation in LMICs [22,23].

On the other hand, climate change has impacted the world’s ecosystems at both pathogenic and vector levels, increasing the incidence of vector-borne infectious diseases [2428]. As climate change continues to raise global temperatures, dengue and other vector-transmitted tropical diseases (i.e., malaria, yellow fever, Chagas, etc.) may become a concern in countries and regions where they were not previously endemic. A prior study reported an expansion of the distribution of the dengue vector (Aedes aegypti mosquito) into new territories worldwide due to increased precipitation and high temperatures [29]. These climate changes have modified the diurnal temperature range (DTR), affecting the survival and adaptability of the Aedes aegypti, leading to a reduction in mortality and increased feeding frequency [30,31]. Furthermore, changes in climatic events such as precipitation, humidity, and temperature affect vector reproduction, development, mortality, viral replication within the mosquito, and the number of reservoirs [24,3133]. Overall, an increase in dengue frequency has been described in low-income areas, suggesting an association between socioeconomic, climatic, and dengue incidence vulnerabilities [3437]. All these social, economic, climatic/environmental, or governmental vulnerabilities may modify the epidemiological dynamics of dengue on a global perspective [31]. The interaction between these factors and the health determinants can modify both the spatial distribution patterns of the vector and the dengue transmission rate [3843]. Although most available evidence has quantified the individual impact of specific vulnerabilities on the frequency of dengue, to date, there are no comprehensive analyses that assess the impact of these vulnerability factors on the occurrence of the disease [15,4447]. In this study, we characterized the vulnerability factors (sociodemographic, climatic, and governmental) associated with dengue, and their relationship with the frequency of dengue in Colombia, a Latin American LMIC, during 2015–2020. This, based on a vulnerability concept defined as the presence and configuration of risk. The aim of this study was to design a multidimensional vulnerability index that synthesizes these vulnerability factors, as well as to correlate the values of this proposed index with the reported dengue case frequency in the country during the period 2015–2020.

Materials and methods

Ethics Statement

This study was approved by the Ethics Committee of the Hospital Universitario Fundación Santa FE (CCEI-15374–2023).

Study design

Analytical, ecological, observational study with repeated measures based on data collected from several national sources, including: the Bank of the Republic (central bank of Colombia), the National Ministry of health, the National Administrative Department of Statistics (DANE), the National Planning Department (DNP), and the National Health Institute (INS) [4850]. Monthly data from January 2015 to December 2020 were analyzed, covering a total of 1,110 municipalities in Colombia. The study population included the entire population with reported dengue cases at the municipal level during the specified period.

Colombia has a population of 51,049,498 inhabitants according to the 2018 national population census. The country is divided into 32 departments, which function as first-level territorial entities, and 1,099 municipalities, which are second-level administrative divisions within departments. Each municipality has local governance structures, including a mayor and municipal council. Public health policies, including dengue surveillance and control, are implemented at both the national (Ministry of Health) and local (municipal health secretariats) levels. Local governments collaborate with the National Health Institute (Instituto Nacional de Salud or INS) and regional health institutions to monitor diseases like dengue [49,51]. Most of Colombian territory ranges between 1,000 and 2,000 meters above sea level, with average temperatures ranging from 11 to 17°C. All this information is registered in National databases from the DNP [50]. In terms of human development, Colombia ranks in the 88th position worldwide and had a Human Development Index (HDI) of 0.756 in 2020, categorizing it as having a middle to high level of human development. However, the country has significant inequalities, exhibiting a Gini index of 0.553 of 2023 (the Gini index determines a nation’s level of income inequality by measuring the income distribution or wealth distribution across its population) [52].

Dengue case data

In Colombia, dengue surveillance is conducted through the National Public Health Surveillance System (SIVIGILA) managed by the INS and conducted using passive and active surveillance with the regional healthcare institute [49,51]. The data used in this study was extracted from this system: the authors gathered all the weekly dengue reports at a municipal/local level based [49,51]. For the analysis, the data were aggregated into annual case counts per municipality to facilitate temporal and spatial comparisons. Dengue cases are classified by SIVIGILA as probable, confirmed, or confirmed by epidemiological link, based on clinical criteria and laboratory confirmation, following national epidemiological surveillance guidelines [49,51].

Descriptions of the variables used to design the Multidimensional Vulnerability Index

The main variables included in the design of the vulnerability index were based on prior reports and guidelines to assess vulnerability in public health [15,44,45,5356]. Variables related with access to basic services were included, such as: percentage of population with aqueduct coverage, sewerage coverage, education coverage, healthcare coverage subsided by the government, and access to public services. Moreover, international indexes to assess the standard of living worldwide were included: Gross Domestic Product (GDP) per capita (USD millions) which is a measure of a country’s economic activity (total monetary value of all goods and services produced within a country per year), and the multidimensional poverty index that quantifies poverty through weighted deprivations across health, education, and living standards (identifies individuals as poor when their deprivation score exceeds a predefined threshold). Furthermore, the latitude, the levels of relative humidity, temperature, and precipitation were assessed in the index, considering the prior literature that suggests an association between these factors and the frequency of dengue infection rates [46,47,56,57]. This information was obtained from the DNP databases and Climate Change Knowledge Portal [50,58]. Additionally, two Colombian indexes were initially included in the analysis considering their correlation with the transparency of public health campaigns for the populations. The Municipal Transparency Index (MTI) is a civil society initiative that measures the institutional conditions of city governments that could favor acts of corruption in administrative management, preventing these events [59]. On the other hand, the Municipal Performance Measurement (MPM) measures the municipal performance, understood as the management of Territorial Entities and the achievement of development results (the improvement in the quality of life of the population), considering the initial capabilities of the municipalities [60]. To achieve this measurement, the National Planning Department designed and developed a methodology structured according to the measurement components (Management and Results) and the composition of the initial capacity group, based on which municipal comparisons and rankings are made municipalities [60].

Design of the multidimensional vulnerability index

Data sources were collected from state databases of the DANE [48], Climate Change Knowledge Portal [58] and DNP [50]. All variables were collected assuming that they are potential indicators of vulnerability, following the recommendations to design vulnerability indices established by the “Gesellschaft Für Internationale Zusammenarbeit” (GIZ) [61] and the Organization for Economic Co-operation and Development (OECD) [62,63]. Moreover, factors associated with the dengue phenomenon were included considering a prior literature review, and reports from the WHO [1,56,64].

All variables were standardized prior to analysis. To identify patterns of covariation among variables and construct a multidimensional vulnerability index, initially we were going to apply a Principal Component Analysis (PCA), a widely used method for synthesizing correlated indicators into composite indices in epidemiological, environmental, and disaster risk contexts [63,6570]. Although there are other approaches for multidimensional vulnerability assessment such as independent component analysis, confirmatory factor analysis or latent class analysis, PCA allows for the synthesis of information without making any assumptions about data distribution or latent structures. PCA offers advantages such as dimensionality reduction, objectivity in weighting, and applicability without assuming latent structures or specific data distributions. Although there are other approaches to multidimensional vulnerability assessment, such as independent component analysis, confirmatory factor analysis, or latent class analysis, PCA allows information to be synthesized without making assumptions about data distribution or latent structures. This analysis has been applied in previous studies to integrates socioeconomic indicators through PCA to map vulnerability to environmental hazards [71], assess vulnerability in disaster risk assessment [6567,71], public health infrastructure risk [68], socioeconomic status [72], and the design of epidemiological indices [65,69,70].

The process of constructing the multidimensional vulnerability index (MVI) was based on the evaluation of the relationships between variables, using Spearman’s correlation analysis, the Kaiser-Meyer-Olkin (KMO) value greater than 0.5 and Bartlett’s test of sphericity, both of which supported the use of this method, ensuring the suitability of the variables for dimensionality reduction [62,73,74]. These variables were chosen based on a literature review identifying climatic and non-climatic variables associated with vector-borne diseases [15,28,31,34,44,45,56]. Following the guidelines established in the literature for index building and design in public health [63], a min-max normalization process was implemented to standardize the selected variables for index construction:

yi,t=xi,tMinxtMaxxtMinxt If there is a positive relationship with the vulnerability domain.

or

yi,t=Maxxtxi,tMaxxtMinxt If there is a negative relationship with the vulnerability domain.

Where yi,t is the value of the normalized variable for municipality i in a period t, and xi,t is the actual value of the variable for municipality i in a period t, minxt and maxxt are the minimum and maximum values for variable x in a period t. Given the possible spatial autocorrelation structure, a univariate Moran’s I was calculated for each variable to assess the degree of spatial autocorrelation. Given the high spatial autocorrelation observed in several variables (e.g., Moran’s I > 0.5, p < 0.001) led us to apply a spatially constrained Principal Component Analysis (spPCA), since the strong spatial correlation identified by Moran’s analysis, if ignored, can limit the results of PCA, as the possible spatial dependence in the analyses should not be ignored when performing PCA for geographically distributed data [75]. Therefore, a spPCA was implemented, which extends traditional PCA by integrating a spatial correlation. Unlike traditional PCA, spPCA incorporates spatial structure through Moran’s eigenvector maps (MEM), which improves the detection of geographically structured patterns [75]. No varimax or other orthogonal factor rotations were performed, as this would alter the spatial structure captured by the Moran’s Eigenvector Maps (MEM), reducing the interpretability of the spatial components [75,76].

Finally, the final weight of each standardized variable was calculated using the squared loadings of the variables within each selected component multiplied by the proportion of variance explained by that component. This weight was normalized across all variables to ensure that the total contribution was 100% [62]. Mathematically, the weight for a variable yk in component c is:

ωk=(λc·lk,c2)k(λc·lk,c2)

Where ωk is the weight of variable yk, λc is the variance explained by component c and lk,c2 is the loading of variable yk in component c. After the calculation of the weights, the multidimensional vulnerability index was defined as follows:

MVI=\nolimitsi=1kωk·yk

Where ωk=  Weight variable for the domain, k for the number of variables included in the analysis. Both the index values and the number of cases were plotted to represent the spatial variation of the index in Colombia during each period. Scores were standardized to range from 0 (least vulnerable) to 1 (most vulnerable) at the municipal level. Five vulnerability categories were defined based on the calculated index value: very low (0-0.20), low (0.21-0.40), moderate (0.41-0.6), high (0.61-0.8), and extremely high (0.81-1) [61,75]. The spPCA analysis was conducted using the ‘ade4’ and ‘adespatial’ R packages [77,78] for incorporate spatial structure into the component extraction through MEMs [75].

Correlational analysis of the multidimensional vulnerability index and dengue cases

To assess the joint spatial distribution of dengue cases and the Multidimensional Vulnerability Index (MVI), a bivariate Moran’s I analysis was conducted to detect possible spatial autocorrelation. This method quantifies the degree to which high (or low) values of dengue cases co-occur spatially with high (or low) values of the MVI. The statistical significance of Moran’s I was evaluated, and 999 permutations were used to ensure the robustness of the results. Additionally, a bivariate thematic map was created to visualize the spatial relationship between both variables. The maps represent the number of dengue cases in shades of blue and the MVI in shades of red. The resulting color gradients (e.g., purple tones) indicate municipalities where both variables exhibit high values simultaneously. On the other hand, to analyze the relationship between MVI and the number of dengue cases reported in the country from 2015 to 2020, a Spearman correlation analysis was first conducted to assess the strength and direction of their linear association. Since the results suggested potential non-linear relationships, a spatial Generalized Additive Mixed Model (spatial GAMM) with a negative binomial distribution was fitted to evaluate the association between dengue cases and the MVI while accounting for spatial and temporal structure. The model included a smooth function of the MVI, a two-dimensional spline over geographic coordinates (longitude and latitude), and a random effect for year. The spatial GAMM estimations were conducted using the ‘mgcv’ R package [79], applying penalized cubic regression splines to allow for flexible smoothing of the relationship between MVI and dengue incidence over time. Moran analysis was conducted using the ‘spdep’ package [80]. Statistical analysis was conducted using R 4.1.1 and Stata 17 MP software. The geographic base layer used for the maps (Colombian municipal boundaries) was sourced from the publicly available shapefile provided by the Línea Base project. The shapefile used is available from: https://lineabase.com.co/shape-municipios-colombia/.

Results

Sociodemographic, economic, and climatic characteristics of the study population

A total of 1099 municipalities were included in the study and analyzed across six years (2015–2020), yielding an initial dataset of 6594 observations that after data cleaning led to a final dataset that included 6520 observations. Table 1 describes the characteristics of these municipalities by years. The year 2019 had the highest incidence or new dengue cases (118956 total cases; mean = 9.01 cases, SD = 43.13 cases) with a mean of 4 cases by territory (average per year). The median altitude above sea level was 1,010 meters (range: 1.00-3,850 meters). The median values of health, and education coverage indicators were above 50% during the analyzed periods, contrasting with the median water supply coverage, which was below this value.

Table 1. Table of sociodemographic characteristics of the study population.

Variablesa 2015 2016 2017 2018 2019 2020
Total number of reported cases of dengue fever 91378 96592 24448 42427 118956 47997
Mean of reported cases of dengue fever (SD) 6.94 (45.68) 7.32 (75.10) 1.85 (12.68) 3.22 (17.18) 9.01 (43.13) 3.79 (17.96)
Height above mean sea level 1086.07 (900.86) 1088.79 (902.29) 1088.79 (902.29) 1089.74 (902.15) 1088.79 (902.29) 1087.84 (916.85)
Population density (hab/km²) 147.02 (678.02) 149.02 (689.36) 151.55 (702.85) 155.05 (720.54) 159.32 (743.62) 161.03 (769.87)
Aqueduct coverage (%) 60.31 [35.94-88.49] 57.48 [34.36-82.23] 58.60 [36.44-82.78] 75.17 [56.38-87.64] 60.94 [37.96-85.03] 60.94 [38.46-84.66]
Sewerage coverage (%) 36.22 [17.41-62.14] 35.06 [16.57-60.23] 36.53 [18.48-59.71] 44.62 [27.31-65.06] 38.52 [19.89-61.76] 39.56 [20.54-60.55]
Education coverage (%) 83.72 [72.21-95.00] 83.24 [71.85-95.68] 82.56 [70.69-95.67] 81.68 [69.63-96.27] 88.41 [80.23-96.06] 87.62 [79.66-94.95]
Healthcare coverage subsided by the government (%) 97.60 [96.68-98.30] 98.64 [97.84-99.12] 98.94 [98.15-99.33] 98.42 [97.67-98.90] 99.36 [98.74-99.62] 98.86 [98.13-99.26]
Transparency of the project: management index (%) 73.65 [62.22-86.44] 73.62 [62.20-86.43] 83.78 [64.06-95.50] 86.43 [67.46-96.53] 85.91 [64.65-97.07] 85.19 [65.72-96.39]
Access to public services (%) 45.74 [38.72-53.88] 45.74 [38.71-53.85] 46.75 [39.74-53.92] 47.00 [39.10-55.10] 47.22 [39.74-54.38] 48.08 [40.47-55.40]
Municipal Performance Measurement (%) 47.31 [41.41-53.42] 47.30 [41.45-53.40] 48.95 [43.29-54.69] 49.80 [44.36-55.71] 55.29 [48.89-60.64] 50.56 [44.00-57.00]
Multidimensional poverty index (%) 39.98 [33.48-47.99] 39.98 [33.50-47.97] 34.50 [25.89-47.15] 33.35 [25.64-53.14] 45.18 [35.02-56.33] 31.61 [24.06-48.16]
GDP per capita (USD millions)b 5955.65 [3752.64-6859.33] 5390.72 [3672.05-6613.90] 5802.65 [3914.63-6953.09] 5990.51 [4037.03-7469.73] 5795.29 [3688.53-7074.89] 4495.30 [2707.69-5677.39]
Precipitation (mm) 168.19 (108.21) 201.09 (128.06) 180.68 (115.82) 172.80 (110.72) 173.65 (117.79) 175.87 (109.77)
Maximum temperature (degrees Celsius) 27.46 (3.49) 27.31 (3.60) 26.86 (3.56) 26.78 (3.50) 27.23 (3.48) 27.25 (3.62)
Minimum temperature (degrees Celsius) 18.60 (4.05) 18.76 (3.94) 18.47 (3.91) 18.36 (3.92) 18.70 (3.94) 18.57 (3.99)
Relative humidity (%) 79.36 (6.48) 80.68 (6.84) 80.81 (6.35) 80.67 (7.02) 80.17 (6.86) 79.48 (7.18)

a. Data are presented as mean (standard deviation) or median (min-max) for quantitative variables.

b. Based on mean TRM for each year.

Regarding the distribution of dengue at the territorial level during 2015–2020, a higher number of cases are observed in the Caribbean region (Northern coastal region of Colombia located contiguous to the Caribbean Sea, mainly rural tropical regions) of the country, as well as in the central (Capital city, urban city center located in a high-altitude region) and northeastern regions (Amazonia region, rural populations). This pattern remains consistent in the territories that report the highest number of dengue cases (Fig 1).

Fig 1. Spatial distribution of reported cases of dengue fever in the study period.

Fig 1

Multidimensional vulnerability index

To assess the spatial correlation of the selected variables, Moran’s I was calculated. The results (Table 2) showed varying degrees of spatial correlation, some variables presented high Moran’s I values (minimum temperature: I = 0.91; precipitation: I = 0.88) while others showed weak or no spatial correlation (access to public services: I = 0.25; education coverage: I = 0.15). These results confirm the strong spatial structure of the data, supporting the methodological decision to apply spPCA instead of traditional PCA. Of the 16 preliminary variables chosen, the indicators Transparency Index, Municipal Performance was excluded; due to high collinearity with other governmental indicators included that represent social vulnerability gradients such as Municipal performance measurement (ρ = 0.67, p < 0.05), so their inclusion would have caused overrepresentation of dimensions in the index. The variables indicated in Table 2 were selected as they exhibited the highest factor loadings in the analysis, accounting for 45.55% of the total variance.

Table 2. Loadings of the Principal Components (PC) considered for vulnerability index.

Domain Variable PC 1 PC 2 PC 3 PC 4 Moran’s Ia
Climatic dimension Height above sea level 0.40 0.802
Maximum temperature 0.45 0.907
Minimum temperature 0.47 0.910
Rain-related dimension Relative humidity 0.48 0.841
Precipitation 0.49 0.881
Socioeconomic development dimension PIB per capita 0.55 0.843
Population density 0.22 0.339
Subsidized health coverage -0.03 0.303
Education coverage 0.07 0.155
MPI -0.01 0.188
Social development dimension Sewerage coverage -0.27 0.233
Water supply coverage -0.18 0.172
Access to public services -0.26 0.252
Municipal performance measurement -0.24 0.231
Variance explained by each PC 18.49 11.22 8.63 7.21 --

a.Moran’s I calculated for each standardized variable to assess spatial autocorrelation. All values statistically significant (p < 0.05).

The variables after spPCA were categorized into the four domains shown in Table 2: climatic/environmental dimension, rain-related dimension, socioeconomic development, and social development dimension. The weightings give greater importance to the climatic component (weight: 45.17%) and rain-related component (weight: 27.6%), and the individual and domain-level weightings are shown in Table 3. The distribution of the variables for each domain is described in S1-S4 Figs. The proposed index showed a mean vulnerability of 0.48 (median = 0.48; SD = 0.15; IQR: 0.36-0.59). Mean IVM scores showed minimal variation acoss years, ranging from 0.469 (SD = 0.15) in 2016 to 0.483 (SD = 0.14) in 2018. Higher index values were found in the southwestern territories and the Amazon regions of Colombia, as well as some municipalities in the Caribbean region. These territories exhibited the highest levels of poverty, regional access to services, precipitation, and temperature. Spatial analyses confirmed this concordance.

Table 3. Domains, variables, and weights of the selected indicators for the construction of the multidimensional vulnerability index.

Domain Variable Weigh (%) Domain weight (%)
Climatic factors Height above sea level 12.06 45.17
Maximum temperature 16.66
Minimum temperature 16.45
Rain-related factors Relative humidity 13.2 27.6
Precipitation 14.4
Socioeconomic development PIB per capita 14.73 20.42
Population density 3.99
Subsidized health coverage 0.66
Education coverage 0.43
MPI 0.61
Social development Sewerage coverage 0.95 6.81
Water supply coverage 2.24
Access to public services 1.98
Municipal performance measurement 1.64

a.Weights were obtained from the spatial PCA loadings and variance explained, standardized and rescaled following the OECD methodology for composite indicators.

Regarding the territorial distribution of the index during 2015–2020, the northern and western regions of the country, as well as the region near the Amazon, exhibit the highest vulnerability values. Territories with the highest values (>0.80) are municipalities along the Pacific coast and the Amazon, while the lowest values (<0.20) were found in the Andean region, particularly in the central area of the country where main cities are located. These results remain consistent throughout the analyzed years (Fig 2).

Fig 2. Spatial distribution of Multidimensional Vulnerability Index in the study period.

Fig 2

Correlation analysis between Dengue Cases and Multidimensional Vulnerability Index

A bivariate spatial analysis was conducted to visualize the relationship between the proposed MVI and the number of reported cases in over the analyzed years (Fig 3). In the figure, the number of dengue cases is represented in shades of blue, while the proposed vulnerability index is shown in shades of red, purple tones indicate areas where both variables have high values, suggesting that territories with a higher incidence of dengue tend to align with regions classified as highly or extremely vulnerable purple tones indicate higher values in both variables, with territories reporting more dengue cases aligning with high and extremely high values of the index.

Fig 3. Joint spatial distribution of reported cases of dengue fever and Multidimensional Vulnerability Index for the periods of analysis.

Fig 3

The bivariate spatial association between the Multidimensional Vulnerability Index (MVI) and dengue cases was examined through Moran’s I tests on the residuals of year-specific linear regressions. All years from 2015 to 2020 showed statistically significant positive spatial autocorrelation: Moran’s I ranged from 0.033 in 2015 (p = 0.027) to 0.131 in 2018 (p < 0.001), indicating that municipalities with similar levels of dengue incidence and vulnerability tend to cluster geographically. These findings support the existence of spatial structures not fully captured by the bivariate relationship, suggesting local hotspots where vulnerability and dengue incidence are concurrently elevated.

On the other hand, Spearman’s rank correlation analysis between the MVI and the number of dengue cases yielded a Spearman correlation coefficient of ρ = 0.25 (p < 0.001), being a linear, positive and weak correlation. Additionally, the spatial generalized additive multilevel model (spatial GAMM) showed a significant non-linear relationship between the MVI and dengue incidence (Effective Degrees of Freedom/edf = 8.7, p < 0.001), with higher case counts observed in municipalities with elevated MVI values. The spatial component was also significant (edf = 27.4, p < 0.001), confirming the presence of spatial clustering in dengue distribution. The estimated smooth function suggests that dengue cases tend to increase with higher MVI values up to a certain threshold, particularly above 0.8, after which the trend stabilizes (Fig 4).

Fig 4. Generalized Additive Mixed Models estimated for the Multidimensional Vulnerability Index and dengue cases in Colombia based on data from 2015 − 2020.

Fig 4

Discussion

This study found that municipalities with higher scores in the proposed MVI experienced significantly higher dengue incidence. The spatial Generalized Additive Model revealed a nonlinear and geographically clustered relationship, reinforcing the need to integrate social and geographic data in vector-borne disease surveillance, as priorly described in Figs 2 and 4 and the bivariate Moran’s I analyses. Therefore, this index provides preliminary evidence to guide the development of outbreak prevention campaigns for this disease. The proposed index comprises four main dimensions: climatic/environmental dimension, rain-related dimension, socioeconomic development, and social development dimension. Previous studies have described that regions with specific climatic conditions and higher sociodemographic vulnerabilities require increased investment in public health to enable dengue control at the regional level [15,28,34,35,44,56,81,82].

Our findings are similar to previously published literature, underscoring the importance of the joint analysis of the conditions that may impact the epidemiology of dengue. This approach enables the development of comprehensive public health strategies that help identify the individual contributions of each dimension to the development of vulnerability conditions in populations. Despite this index included two main dimensions that are country-specific (MPM and MTI), our analysis can be extended to other countries, as these two dimensions can be replaced by local regional development measures. We highlight that all the additional measures included in the index (Climatic dimension, basic services coverage, rain-related conditions, and social development) can be universally measured. Therefore, this index can be modified and analyzed in different countries.

The proposed index showed the highest vulnerability values in the southwestern territories (Amazon and Orinoquia regions) and the Caribbean region of Colombia. According to previous literature reports, these territories exhibit the highest levels of poverty, regional access to services, and increased levels of precipitation and temperature [44,83]. Spatial analyses at the municipal level further confirmed this concordance. This supports the usefulness of the index in terms of public health and allows for standardizing analyses in the case of dengue. Furthermore, we were able to characterize sociodemographic, climatic, and governmental factors and their relationship with dengue epidemiological dynamics over a 6-year period. The widespread prevalence of dengue worldwide in the last decade has led to increasing concern for identifying and controlling factors contributing to its spread [1,45,81,84]. In this scenario, our approach emerged as a proposal to understand and quantify the complex interactions underlying the dynamics of dengue. The construction of the MVI was supported by adequate psychometric criteria (KMO, Bartlett’s test, and explained variance), ensuring its internal consistency. The loadings reflect theoretical constructs of vulnerability as described by Cutter et al. and Adger, and the use of domain grouping further enhances interpretability [71,85].

The use of a spatial GAMM model allowed us to validate the relationship between the MVI and the number of dengue cases, taking into account spatial autocorrelation and temporal heterogeneity. The significant spatial term shows the importance of considering geographic clustering in vulnerability and disease burden analyses. The nonlinear association between the MVI and dengue incidence suggests threshold effects, in which municipalities with MVI scores above 0.8 experience a disproportionately higher disease burden, consistent with similar findings in spatial epidemiology. These findings suggest that beyond a certain level of structural vulnerability, the ability to prevent arboviral outbreaks is significantly reduced. Similar threshold-like patterns have been observed in spatial epidemiology studies [86,87].

The MVI can be used as a tool to guide decision-making in public health planning by identifying territories at higher risk of dengue outbreaks. The spatial patterns observed highlight persistent regional vulnerabilities, particularly in the Pacific, Amazonian, and northern regions of the country. The findings of this study highlight the need for a multisectoral approach to dengue prevention, integrating socioeconomic and environmental determinants into surveillance and response strategies. Actions such as the incorporation of the vulnerability index into dengue surveillance systems would allow its use as a predictive tool to identify high-risk areas and prioritize intervention efforts, based on theoretical matrix for the identification of the most vulnerable municipalities (Table 4).

Table 4. Identification matrix of vulnerable territories.

Dengue Incidence Low Vulnerability
(MVI < 0.40)
Moderate Vulnerability
(0.41 ≤ MVI < 0.60)
High Vulnerability
(MVI ≥ 0.60)
Low Cases
(<Percentile 25)
Low-priority areas Potential risk zones (monitoring required) Vulnerable but currently low-risk areas
Moderate Cases
(Percentile 25- Percentile 50)
Areas with stable conditions Areas requiring epidemiological surveillance Areas requiring proactive interventions
High Cases
(≥Percentile 75)
Epidemiological alert zones High-risk areas requiring intervention High-priority intervention areas

Additionally, the MVI could also be useful for territorial epidemiologic control, allowing the identification of the risk level categories, as well as to track vulnerability trends over time, establishing real-time vector control and mitigation strategies [28,8892]. Likewise, implementing this index, also includes the impact of climate related variables on the epidemiological trends of tropical diseases, which in the context of climate change has important implications for public health [35,56,9395]. We highlight the need to implement policies aimed at urban planning, infrastructure improvement and equitable distribution of resources. These should be coordinated between the health, environment and urban development sectors to reduce vulnerability gradients and improve community resilience [1,3,96]. By incorporating spatial risk assessment tools like the MVI into national dengue control programs, public health authorities can move towards a proactive rather than reactive approach, enhancing the efficiency and sustainability of prevention efforts.

We highlight that the index was built considering previous methodologies for vulnerability assessment, and incorporates specific epidemiological, socioeconomic, and environmental factors related to dengue risk in the country. The index showed consistency with prior studies assessing the relationship between the Multidimensional Poverty Index and the frequency of vector-borne diseases [9,44,64,97,98]. In addition, our index also provides a more comprehensive assessment that integrates climate variability and public health infrastructure. Spatial validation using Moran’s I and the nonlinear association with dengue incidence further supports its applicability. While the index is a valuable tool for identifying vulnerable regions, it should be used in conjunction with real-time surveillance systems to optimize dengue prevention strategies.

Recent studies emphasize the importance of studying dengue in “hyper-endemic” LMIC like Colombia; therefore, this study was conducted in an ideal scenario for addressing this issue [82,99101]. However, there are significant challenges related to underreporting bias in government databases (mainly in terms of access to basic services) that have been described in the literature and can be as high as 5% [1,99,102,103]. Additionally, the municipal-level disaggregation of healthcare system affiliation variables can be considered a limitation in this analysis due to difficulties in obtaining more precise data on the existing gaps between the contributory and subsidized regimes. Despite its utility, the MVI is sensitive to indicator selection, and still lacks standardization in terms of methodology and the weighting scheme derived from spPCA. Temporal mismatch among indicators and lack of dynamic updating may affect the accuracy of the index in rapidly changing contexts. Nonetheless, we highlight that the evaluation of inequalities at the municipal level provides valuable information for guiding local public health decisions, informing about the territorial disparities that persist in our country [103]. Overall, the combination of climatic factors, service coverage, municipal performance, and transparency of social development presents an integral scope that reflects the complexity of the challenges Colombia faces in the fight against dengue [99]. Our findings suggest that disparities in access to essential services and climatic variability may be linked to the prevalence of dengue. This scenario has been described in prior literature [24,27,104106]

Furthermore, we highlight the spatial autocorrelation between the geographical distribution of the vulnerability index and the incidence of dengue in different regions of the country. Areas with higher social, economic, and climatic vulnerability showed a significant association with a higher frequency of dengue cases, according to spatial analyses at the municipal level. This association between vulnerability and dengue underscores the importance of specific approaches to prevent and control the spread of the disease in different areas of the country, as reported in previous studies [99]. These findings provide evidence of the relationship between multidimensional vulnerability and the frequency of dengue in Colombia. This study highlights the need for public health approaches that address both climatic and socioeconomic aspects to mitigate the spread of dengue [1]. Understanding these complex dynamics can guide effective prevention and control strategies, allowing for a more precise allocation of resources and efforts in the most affected regions. The proposed vulnerability index can be a valuable tool for prioritizing interventions and guiding dengue prevention-focused public health policies in the country. Our findings show that vulnerability is not an independent factor in outbreaks and epidemics, but rather an active determinant that influences the emergence and spread of diseases. The integration of composite indicators that incorporate spatial information into early warning systems could improve the targeting of interventions in settings characterized by socioeconomic and environmental inequalities and, in general, conditions of vulnerability.

Conclusion

The multidimensional vulnerability index proposed in this study comprised five main factors: climatic factors, basic service coverage, precipitation-related factors, municipal performance, and transparency of social development. The index showed a strong correlation with the frequency of dengue cases at the regional level. Territories with specific climatic conditions and higher sociodemographic vulnerabilities require increased attention in terms of public health to enable dengue control at the territorial level. The proposed vulnerability index can be a valuable tool for prioritizing interventions and guiding public health policies focused on dengue prevention in the country.

Supporting information

S1 Fig. Correlation analysis.

(TIF)

pntd.0013556.s001.tif (59.4KB, tif)
S2 Fig. Distribution of the variables first domain.

(TIF)

pntd.0013556.s002.tif (42.6KB, tif)
S3 Fig. Distribution of the variables second domain.

(TIF)

pntd.0013556.s003.tif (42.9KB, tif)
S4 Fig. Distribution of the variables third domain.

(TIF)

pntd.0013556.s004.tif (43KB, tif)

Data Availability

All relevant data are in the manuscript and its supporting information files.

Funding Statement

The author(s) received no specific funding for this work.

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PLoS Negl Trop Dis. doi: 10.1371/journal.pntd.0013556.r001

Decision Letter 0

Paul O Mireji, Clarence Mang'era

3 Sep 2024

Dear Dr. Moreno-López,

Thank you very much for submitting your manuscript "Designing a multidimensional vulnerability index for supervising dengue cases from 2015 to 2020 in a low/middle-income country: A Principal Component Analysis" for consideration at PLOS Neglected Tropical Diseases. As with all papers reviewed by the journal, your manuscript was reviewed by members of the editorial board and by several independent reviewers. In light of the reviews (below this email), we would like to invite the resubmission of a significantly-revised version that takes into account the reviewers' comments.

In addition to the concerns of the reviewers, pay particular attention to the data presentation quality especially of figures.

We cannot make any decision about publication until we have seen the revised manuscript and your response to the reviewers' comments. Your revised manuscript is also likely to be sent to reviewers for further evaluation.

When you are ready to resubmit, please upload the following:

[1] A letter containing a detailed list of your responses to the review comments and a description of the changes you have made in the manuscript. Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out.

[2] Two versions of the revised manuscript: one with either highlights or tracked changes denoting where the text has been changed; the other a clean version (uploaded as the manuscript file).

Important additional instructions are given below your reviewer comments.

Please prepare and submit your revised manuscript within 60 days. If you anticipate any delay, please let us know the expected resubmission date by replying to this email. Please note that revised manuscripts received after the 60-day due date may require evaluation and peer review similar to newly submitted manuscripts.

Thank you again for your submission. We hope that our editorial process has been constructive so far, and we welcome your feedback at any time. Please don't hesitate to contact us if you have any questions or comments.

Sincerely,

Clarence Mang'era, PhD

Guest Editor

PLOS Neglected Tropical Diseases

Paul Mireji

Section Editor

PLOS Neglected Tropical Diseases

***********************

In addition to the concerns of the reviewers, pay particular attention to the data presentation quality especially of figures.

Reviewer's Responses to Questions

Key Review Criteria Required for Acceptance?

As you describe the new analyses required for acceptance, please consider the following:

Methods

-Are the objectives of the study clearly articulated with a clear testable hypothesis stated?

-Is the study design appropriate to address the stated objectives?

-Is the population clearly described and appropriate for the hypothesis being tested?

-Is the sample size sufficient to ensure adequate power to address the hypothesis being tested?

-Were correct statistical analysis used to support conclusions?

-Are there concerns about ethical or regulatory requirements being met?

Reviewer #1: The objective of the paper is clearly stated and the introduction poses this well. Additional literature on existing multidimensional approaches is however missing.

The study design in terms of chosen data is appropriate however the technique requires a major revision. 1) The method is poorly written up with notation not defined, equations formatted poorly and the method not justified. In addition, both PCA and factor analysis are referred to - I wonder which was used. 2) The data is inherently spatial and exhibits spatial autocorrelation as can be seen in the graphics provided, thus a spatial PCA needs to be conducted, not a tradition al PCA.

Reviewer #2: 1. Are the objectives of the study clearly articulated with a clear, testable hypothesis stated?

The objectives of the study are clearly defined, focusing on the development of a multidimensional vulnerability index for supervising dengue cases from 2015 to 2020. However, the correlation between the vulnerability index and dengue cases should be explicitly stated to make the hypothesis more testable.

2. Is the study design appropriate to address the stated objectives?

The study design appears appropriate for the stated objectives. However, it is essential to include a section on the dengue surveillance system in the country, detailing how dengue data is collected and the frequency of data collection by various sectors. Additionally, clarifying whether the data was aggregated into annual summaries is necessary.

3. Is the population clearly described and appropriate for the hypothesis being tested?

The population is described in terms of territories and municipalities, but there is some ambiguity in the definitions and administrative hierarchy. A clear explanation of these terms within the country’s administrative structure is needed to ensure the population is appropriate for the hypothesis being tested.

4. Is the sample size sufficient to ensure adequate power to address the hypothesis being tested?

The sample size appears sufficient, with data spanning multiple years (2015–2020) across various municipalities and territories. However, further clarification on how the sample size relates to the administrative units and the frequency of data collection would strengthen this assessment.

5. Were correct statistical analyses used to support conclusions?

Principal Component Analysis (PCA) is an appropriate statistical method for developing a multidimensional index. However, the use of epidemiological terminologies should be consistent, and it is important to clarify whether the reported cases are annual averages, incidence rates, or monthly averages. Additionally, the calculation of "Joint spatial distribution" mentioned in Figure 3 should be explained in the methods section.

6. Are there concerns about ethical or regulatory requirements being met?

Yes.

Please include a map of the country here to highlighting dengue incidence by municipalities/territories.

--------------------

Results

-Does the analysis presented match the analysis plan?

-Are the results clearly and completely presented?

-Are the figures (Tables, Images) of sufficient quality for clarity?

Reviewer #1: The results aren't possible to evaluate as the resolution of the graphics is to poor. This will need to be redone before it can be assessed.

I do also miss a validation of the index - to just plot the last visualisation does not validate the proposed index.

In addition, there is no discussion on the variables removed from the PCA - how does one validate the variables chosen are correct and there isn't something else that needs to be considered?

Reviewer #2: 1. Does the analysis presented match the analysis plan?

Yes

2. Are the results clearly and completely presented?

Needs improvement.

Lines 188 to 189: The statement "The year 2019 had the highest number of reported dengue cases (119,008 cases) with a mean of 4 cases by territory" is unclear. It appears that the country has more territories than municipalities (n=1100), with an average of 108 cases per municipality. Is this figure referring to the monthly average per municipality? Please clarify and revise as needed. Additionally, use appropriate epidemiological terminology (e.g., incidence, rate) and specify whether the data refers to annual average dengue cases or incidence when describing the dengue data.

In Table 1, please include the total number of dengue cases for each year and specify whether the averages provided are based on territorial or municipal data.

3. Are the figures (Tables, Images) of sufficient quality for clarity?

No.

Line 199: The Figure 1 is not clear. Please submit a clear image for review.

Line 231: The Figure 2 is not clear. Please submit a clear image for review.

Line 231: The Figure 3 is not clear. Please submit a clear image for review.

What is meant by the “Joint spatial distribution” mentioned in Figure 3? Please explain how this was calculated in the methods section. Unfortunately, the figures are unclear, making it difficult to provide further comments on this.

--------------------

Conclusions

-Are the conclusions supported by the data presented?

-Are the limitations of analysis clearly described?

-Do the authors discuss how these data can be helpful to advance our understanding of the topic under study?

-Is public health relevance addressed?

Reviewer #1: The discussion and conclusion make a number of statements that are not shown with evidence in the results.

Reviewer #2: 1. Are the conclusions supported by the data presented?

Needs improvement. Please see my comments in methods and results sections.

2. Are the limitations of analysis clearly described?

Yes

3. Do the authors discuss how these data can be helpful to advance our understanding of the topic under study?

Needs improvement. Please see my comments below.

4. Is public health relevance addressed?

Please see my comments below.

Line 236: What is meant by “frequency of dengue cases”? Please use consistent epidemiological terminology throughout the manuscript.

Lines 277 to 278: The authors state, "Furthermore, we highlight the correlation between the geographical distribution of the vulnerability index and the incidence of dengue in different regions of the country." This is an important observation that should be supported by the methods and results. Please revise these sections to indicate how this correlation was determined.

Additionally, please provide a matrix to identify high-priority municipalities or territories, indicating the recommended operational responses.

Please include a section discussing how the vulnerability index can be integrated into dengue prevention and control strategies. Given that this composite index requires intersectoral action, it is crucial to explain how these insights can be translated into actionable steps. Additionally, address how the limitations identified in the data can be mitigated through coordinated efforts across sectors.

--------------------

Editorial and Data Presentation Modifications?

<br/>

Use this section for editorial suggestions as well as relatively minor modifications of existing data that would enhance clarity. If the only modifications needed are minor and/or editorial, you may wish to recommend “Minor Revision” or “Accept”.

Reviewer #1: 1) Throughout: principal component analysis does not get capital letters.

2) ln 65: These statistics are...

3) ln 121: Provide some insight to the reader on the Gini index value.

4) ln 131-132: citations missing

5) ln 139: no capitals

6) lns 141-143: there are many terms here the reader will not understand/know of. Please provide context.

7) ln 147: links needed - add as footnotes

8) ln 149: Some insight from the recommendations should be added to the paper.

9) ln 154: citation missing

10) ln 154: What does a cut off point of > 0.5 mean?

11) lns 176-180: should be in the next section

12) ln 189: How is medium altitude measured?

13) Table 1: why mean for some and median for others?

14) ln 195: Not all readers will know where these areas are?

15) ln 225: no analysis was done, only a visualisation - correct this wording. Add in the actual analysis though to validate the index.

16) ln 236: Where is this significant correlation seen?

17) ln 245-246: language should be fixed

18) ln 248: remove capitals

19) ln 254: where is this spatial analysis that is referred to here?

20) ln 264-265: it is unclear here what you want to say.

21) ln 275-276: there is not evidence provided for this statement.

22) ln 277: this correlation needs to be the spatial autocorrelation in the revision

23) ln 279-280: the results do not show this conclusively.

24) All the references need a lot of formatting and corrections. Links rather as footnotes. Many are not in English - please correct this.

Reviewer #2: (No Response)

--------------------

Summary and General Comments

Use this section to provide overall comments, discuss strengths/weaknesses of the study, novelty, significance, general execution and scholarship. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. If requesting major revision, please articulate the new experiments that are needed.

Reviewer #1: While interesting, the analysis is flawed and not well explained nor validated. A revision is required.

Reviewer #2: The manuscript presents a valuable approach by developing a multidimensional vulnerability index to guide dengue prevention and control strategies.

Please include the name of the country in the title. The term “a low/middle-income country” is not specific.

Abstract

It is not clearly stated how the vulnerability index correlates with dengue cases. Please include a statement that explains the correlation between the index and dengue incidence across the country.

--------------------

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Reviewer #1: No

Reviewer #2: No

Figure Files:

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email us at figures@plos.org.

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Please note that, as a condition of publication, PLOS' data policy requires that you make available all data used to draw the conclusions outlined in your manuscript. Data must be deposited in an appropriate repository, included within the body of the manuscript, or uploaded as supporting information. This includes all numerical values that were used to generate graphs, histograms etc.. For an example see here: http://www.plosbiology.org/article/info%3Adoi%2F10.1371%2Fjournal.pbio.1001908#s5.

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To enhance the reproducibility of your results, we recommend that you deposit your laboratory protocols in protocols.io, where a protocol can be assigned its own identifier (DOI) such that it can be cited independently in the future. Additionally, PLOS ONE offers an option to publish peer-reviewed clinical study protocols. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols

PLoS Negl Trop Dis. doi: 10.1371/journal.pntd.0013556.r003

Decision Letter 1

Paul O Mireji, Clarence Mang'era

31 Jul 2025

Designing a multidimensional vulnerability index for supervising dengue cases from 2015 to 2020 in a low/middle-income country: A principal component analysis

PLOS Neglected Tropical Diseases

Dear Dr. Moreno-López,

Thank you for submitting your manuscript to PLOS Neglected Tropical Diseases. After careful consideration, we feel that it has merit but does not fully meet PLOS Neglected Tropical Diseases's publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

Please submit your revised manuscript within 60 days Aug 30 2025 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosntds@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pntd/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

Please include the following items when submitting your revised manuscript:

* A rebuttal letter that responds to each point raised by the editor and reviewer(s). You should upload this letter as a separate file labeled 'Response to Reviewers'. This file does not need to include responses to any formatting updates and technical items listed in the 'Journal Requirements' section below.

* A marked-up copy of your manuscript that highlights changes made to the original version. You should upload this as a separate file labeled 'Revised Manuscript with Track Changes'.

* An unmarked version of your revised paper without tracked changes. You should upload this as a separate file labeled 'Manuscript'.

If you would like to make changes to your financial disclosure, competing interests statement, or data availability statement, please make these updates within the submission form at the time of resubmission. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter.

We look forward to receiving your revised manuscript.

Kind regards,

Clarence Mang'era, PhD

Academic Editor

PLOS Neglected Tropical Diseases

Paul Mireji

Section Editor

PLOS Neglected Tropical Diseases

Shaden Kamhawi

co-Editor-in-Chief

PLOS Neglected Tropical Diseases

orcid.org/0000-0003-4304-636XX

Paul Brindley

co-Editor-in-Chief

PLOS Neglected Tropical Diseases

orcid.org/0000-0003-1765-0002

Additional Editor Comments:

Please address the reviewers concerns with clarity and finality.

Journal Requirements:

Please provide an Author Summary. This should appear in your manuscript between the Abstract (if applicable) and the Introduction, and should be 150-200 words long. The aim should be to make your findings accessible to a wide audience that includes both scientists and non-scientists. Sample summaries can be found on our website under Submission Guidelines:

https://journals.plos.org/plosntds/s/submission-guidelines#loc-parts-of-a-submission

Reviewers' Comments:

Reviewer's Responses to Questions

Key Review Criteria Required for Acceptance?

As you describe the new analyses required for acceptance, please consider the following:

Methods

-Are the objectives of the study clearly articulated with a clear testable hypothesis stated?

-Is the study design appropriate to address the stated objectives?

-Is the population clearly described and appropriate for the hypothesis being tested?

-Is the sample size sufficient to ensure adequate power to address the hypothesis being tested?

-Were correct statistical analysis used to support conclusions?

-Are there concerns about ethical or regulatory requirements being met?

Reviewer #1: Poorly provided - no actual index provided. How would it be replicated?

Reviewer #2: Authors have provided a reasonable responses to the concerns raised.

**********

Summary and General Comments

Use this section to provide overall comments, discuss strengths/weaknesses of the study, novelty, significance, general execution and scholarship. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. If requesting major revision, please articulate the new experiments that are needed.

Reviewer #1: The authors have provided a revised paper but I find it poorly done:

1) The response to the reviewers should be properly responded to - not just stated done or edited. Motivate what was done and why.

2) Spatial PCA is essential - the Moran's I values indicate some very high spatial autocorrelations and the authors have conveniently left out p-values here. The response to this is thus poor.

3) The authors state they have added literature on other MVI's - but there are not edits in the literature review. Later on there are some citations but that is all focussed on PCA not the design of MVIs.

4) Maths equations are poorly formatted.

5) ln 231: citation missing

6) Factor vs. principal component is still not corrected.

7) No where in the methodology is an actual index defined. The GAM is a model - then talk about a model, not an index. But the authors don't do a spatial model for inherently spatial data?? Also not fitted model discussion or information?

8) references are still poorly formatted

Overall, the authors have not put in effort to correct this paper, either ignoring review comments or working around them incorrectly.

Reviewer #2: Regarding the discussion on the utility of vulnerability index, I understand the author's caution about causality. However, from a public health application perspectives, vulnerability indices are designed to be actionable, even without establishing direct causality. The revised manuscript provides a reasonable account on it's utility. The inclusion of Table 4 is a particularly strong demonstration of the index's practical application.

**********

PLOS authors have the option to publish the peer review history of their article (what does this mean? ). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy .

Reviewer #1: No

Reviewer #2: No

**********

Results

-Does the analysis presented match the analysis plan?

-Are the results clearly and completely presented?

-Are the figures (Tables, Images) of sufficient quality for clarity?

Reviewer #1: Results are incorrect and/or not reported correctly.

**********

Conclusions

-Are the conclusions supported by the data presented?

-Are the limitations of analysis clearly described?

-Do the authors discuss how these data can be helpful to advance our understanding of the topic under study?

-Is public health relevance addressed?

Reviewer #1: No valid

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Figure resubmission:

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. If there are other versions of figure files still present in your submission file inventory at resubmission, please replace them with the PACE-processed versions.

Reproducibility:

?>

PLoS Negl Trop Dis. doi: 10.1371/journal.pntd.0013556.r005

Decision Letter 2

Paul O Mireji, Clarence Mang'era

10 Sep 2025

Dear Dr. Moreno-López,

We are pleased to inform you that your manuscript 'Designing a multidimensional vulnerability index for supervising dengue cases from 2015 to 2020 in a low/middle-income country: A spatial principal component analysis' has been provisionally accepted for publication in PLOS Neglected Tropical Diseases.

Before your manuscript can be formally accepted you will need to complete some formatting changes, which you will receive in a follow up email. A member of our team will be in touch with a set of requests.

Please note that your manuscript will not be scheduled for publication until you have made the required changes, so a swift response is appreciated.

IMPORTANT: The editorial review process is now complete. PLOS will only permit corrections to spelling, formatting or significant scientific errors from this point onwards. Requests for major changes, or any which affect the scientific understanding of your work, will cause delays to the publication date of your manuscript.

Should you, your institution's press office or the journal office choose to press release your paper, you will automatically be opted out of early publication. We ask that you notify us now if you or your institution is planning to press release the article. All press must be co-ordinated with PLOS.

Thank you again for supporting Open Access publishing; we are looking forward to publishing your work in PLOS Neglected Tropical Diseases.

Best regards,

Clarence Mang'era, PhD

Academic Editor

PLOS Neglected Tropical Diseases

Paul Mireji

Section Editor

PLOS Neglected Tropical Diseases

Shaden Kamhawi

co-Editor-in-Chief

PLOS Neglected Tropical Diseases

orcid.org/0000-0003-4304-636XX

Paul Brindley

co-Editor-in-Chief

PLOS Neglected Tropical Diseases

orcid.org/0000-0003-1765-0002

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PLoS Negl Trop Dis. doi: 10.1371/journal.pntd.0013556.r006

Acceptance letter

Paul O Mireji, Clarence Mang'era

Dear Dr. Moreno-López,

We are delighted to inform you that your manuscript, "Designing a multidimensional vulnerability index for supervising dengue cases from 2015 to 2020 in a low/middle-income country: A spatial principal component analysis," has been formally accepted for publication in PLOS Neglected Tropical Diseases.

We have now passed your article onto the PLOS Production Department who will complete the rest of the publication process. All authors will receive a confirmation email upon publication.

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Thank you again for supporting open-access publishing; we are looking forward to publishing your work in PLOS Neglected Tropical Diseases.

Best regards,

Shaden Kamhawi

co-Editor-in-Chief

PLOS Neglected Tropical Diseases

Paul Brindley

co-Editor-in-Chief

PLOS Neglected Tropical Diseases

Associated Data

    This section collects any data citations, data availability statements, or supplementary materials included in this article.

    Supplementary Materials

    S1 Fig. Correlation analysis.

    (TIF)

    pntd.0013556.s001.tif (59.4KB, tif)
    S2 Fig. Distribution of the variables first domain.

    (TIF)

    pntd.0013556.s002.tif (42.6KB, tif)
    S3 Fig. Distribution of the variables second domain.

    (TIF)

    pntd.0013556.s003.tif (42.9KB, tif)
    S4 Fig. Distribution of the variables third domain.

    (TIF)

    pntd.0013556.s004.tif (43KB, tif)
    Attachment

    Submitted filename: Response to reviewers.docx

    pntd.0013556.s006.docx (24.1KB, docx)
    Attachment

    Submitted filename: Response_to_reviewers_auresp_2.docx

    pntd.0013556.s007.docx (17.2KB, docx)

    Data Availability Statement

    All relevant data are in the manuscript and its supporting information files.


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