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. 1991 Jul;60(1):261–272. doi: 10.1016/S0006-3495(91)82048-3

Molecular dynamics studies of the interface between a model membrane and an aqueous solution.

K Nicklas 1, J Böcker 1, M Schlenkrich 1, J Brickmann 1, P Bopp 1
PMCID: PMC1260056  PMID: 1883941

Abstract

Molecular Dynamics (MD) computer simulation studies are reported for a system consisting of two model membranes in contact with an aqueous solution. The influence of the membrane on the adjacent liquid is of main interest in the present study. It is therefore attempted to make the system sufficiently large to encompass the entire region between bulk liquid and the membranes. The latter are modeled by two-dimensional arrays of COO- groups with rotational and translational degrees of freedom. The water molecules are represented by the well-tested TIP4P model. The intermolecular potentials are parametrized in terms of Coulomb interactions between partial charges on the molecular frames and empirical, mostly Lennard-Jones (12-6), interactions centered at the atomic positions. A strong layering of the liquid accompanied by an increase in average water density is found in the vicinity of the membrane. The structural perturbation reaches approximately 8 A into the liquid. We discuss the static structure in these layers in terms of atom-atom distance distribution functions and study the average orientation of the water molecule dipoles with respect to the membrane. From the distribution of the ions, we find that less than 50% of the surface charge of the membrane is neutralized by Na+ ions in the first layer above the membrane. A simplified model of the adsorption site of the ion on the membrane is developed from the distance distributions. Finally the hydration of the Na+ in the first adsorbed layer is discussed.

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Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Skerra A., Brickmann J. Structure and dynamics of one-dimensional ionic solutions in biological transmembrane channels. Biophys J. 1987 Jun;51(6):969–976. doi: 10.1016/S0006-3495(87)83424-0. [DOI] [PMC free article] [PubMed] [Google Scholar]

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