Abstract
X-ray diffraction has been applied in measuring the helical pitch of the gramicidin channel in oriented bilayers of dilauroylphosphatidylcholine (DLPC) and dimyristoylphosphatidylcholine (DMPC) at a polypeptide concentration of 9.1 mol %. The diffraction data show the helical pitch of gramicidin to be 4.7 +/- 0.2 A in both gel and liquid-crystalline phase bilayers, with and without monovalent cations. In addition, the width of the reflection due to the pitch of the helical gramicidin channel is consistent with a five turn helix.
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- Andersen O. S. Gramicidin channels. Annu Rev Physiol. 1984;46:531–548. doi: 10.1146/annurev.ph.46.030184.002531. [DOI] [PubMed] [Google Scholar]
- Arseniev A. S., Barsukov I. L., Bystrov V. F., Lomize A. L., Ovchinnikov YuA 1H-NMR study of gramicidin A transmembrane ion channel. Head-to-head right-handed, single-stranded helices. FEBS Lett. 1985 Jul 8;186(2):168–174. doi: 10.1016/0014-5793(85)80702-x. [DOI] [PubMed] [Google Scholar]
- Finkelstein A., Andersen O. S. The gramicidin A channel: a review of its permeability characteristics with special reference to the single-file aspect of transport. J Membr Biol. 1981 Apr 30;59(3):155–171. doi: 10.1007/BF01875422. [DOI] [PubMed] [Google Scholar]
- Hladky S. B., Haydon D. A. Ion transfer across lipid membranes in the presence of gramicidin A. I. Studies of the unit conductance channel. Biochim Biophys Acta. 1972 Aug 9;274(2):294–312. doi: 10.1016/0005-2736(72)90178-2. [DOI] [PubMed] [Google Scholar]
- Katsaras J., Stinson R. H., Davis J. H., Kendall E. J. Location of two antioxidants in oriented model membranes. Small-angle x-ray diffraction study. Biophys J. 1991 Mar;59(3):645–653. doi: 10.1016/S0006-3495(91)82280-9. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Katsaras J., Stinson R. H. High-resolution electron density profiles reveal influence of fatty acids on bilayer structure. Biophys J. 1990 Mar;57(3):649–655. doi: 10.1016/S0006-3495(90)82583-2. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Koeppe R. E., 2nd, Berg J. M., Hodgson K. O., Stryer L. Gramicidin A crystals contain two cation binding sites per channel. Nature. 1979 Jun 21;279(5715):723–725. doi: 10.1038/279723a0. [DOI] [PubMed] [Google Scholar]
- Koeppe R. E., 2nd, Hodgson K. O., Stryer L. Helical channels in crystals of gramicidin A and of a cesium--gramicidin A complex: an x-ray diffraction study. J Mol Biol. 1978 May 5;121(1):41–54. doi: 10.1016/0022-2836(78)90261-9. [DOI] [PubMed] [Google Scholar]
- Kolb H. A., Bamberg E. Influence of membrane thickness and ion concentration on the properties of the gramicidin a channel. Autocorrelation, spectral power density, relaxation and single-channel studies. Biochim Biophys Acta. 1977 Jan 4;464(1):127–141. doi: 10.1016/0005-2736(77)90376-5. [DOI] [PubMed] [Google Scholar]
- Krasne S., Eisenman G., Szabo G. Freezing and melting of lipid bilayers and the mode of action of nonactin, valinomycin, and gramicidin. Science. 1971 Oct 22;174(4007):412–415. doi: 10.1126/science.174.4007.412. [DOI] [PubMed] [Google Scholar]
- Langs D. A. Three-dimensional structure at 0.86 A of the uncomplexed form of the transmembrane ion channel peptide gramicidin A. Science. 1988 Jul 8;241(4862):188–191. doi: 10.1126/science.2455345. [DOI] [PubMed] [Google Scholar]
- Olah G. A., Huang H. W., Liu W. H., Wu Y. L. Location of ion-binding sites in the gramicidin channel by X-ray diffraction. J Mol Biol. 1991 Apr 20;218(4):847–858. doi: 10.1016/0022-2836(91)90272-8. [DOI] [PubMed] [Google Scholar]
- Urry D. W., Goodall M. C., Glickson J. D., Mayers D. F. The gramicidin A transmembrane channel: characteristics of head-to-head dimerized (L,D) helices. Proc Natl Acad Sci U S A. 1971 Aug;68(8):1907–1911. doi: 10.1073/pnas.68.8.1907. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Urry D. W. The gramicidin A transmembrane channel: a proposed pi(L,D) helix. Proc Natl Acad Sci U S A. 1971 Mar;68(3):672–676. doi: 10.1073/pnas.68.3.672. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wallace B. A. Ion-bond forms of the gramicidin a transmembrane channel. Biophys J. 1984 Jan;45(1):114–116. doi: 10.1016/S0006-3495(84)84131-4. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wallace B. A., Janes R. W. Co-crystals of gramicidin A and phospholipid. A system for studying the structure of a transmembrane channel. J Mol Biol. 1991 Feb 20;217(4):625–627. doi: 10.1016/0022-2836(91)90520-g. [DOI] [PubMed] [Google Scholar]
- Wallace B. A., Ravikumar K. The gramicidin pore: crystal structure of a cesium complex. Science. 1988 Jul 8;241(4862):182–187. doi: 10.1126/science.2455344. [DOI] [PubMed] [Google Scholar]
- Weinstein S., Wallace B. A., Blout E. R., Morrow J. S., Veatch W. Conformation of gramicidin A channel in phospholipid vesicles: a 13C and 19F nuclear magnetic resonance study. Proc Natl Acad Sci U S A. 1979 Sep;76(9):4230–4234. doi: 10.1073/pnas.76.9.4230. [DOI] [PMC free article] [PubMed] [Google Scholar]



