Abstract
Quantitative structure-property relationship (QSPR) and Quantitative structure-activity relationship QSAR modeling are constructed on the principle, which describes that biological activity and physicochemical properties of a chemical compound can be deduced from its chemical structure. These relationships are commonly developed from graph invariants that can be computed from the molecular graphs of chemical compounds. Coronary artery disease occurs when the coronary arteries become narrowed or blocked, which can restrict the flow of oxygen-rich blood to the heart. Coronary artery disease is the leading cause of disability-adjusted life years lost and death worldwide. This study advances QSPR modeling by using eccentricity-based graphical invariants, specifically designed to enhance the predictive accuracy for physicochemical properties of drugs used to treat coronary artery disease, including atorvastatin, simvastatin, rosuvastatin, aspirin, clopidogrel, metoprolol, atenolol, enalapril, lisinopril, amlodipine, diltiazem, nitroglycerin, isosorbide dinitrate, ranolazine, gemfibrozil, and fenofibrate. We used the cubic, logarithmic, quadratic, and linear models to explore the structure-property relationship of drugs for coronary artery disease. We designed the models on the basis of the adjusted r-squared values, assuming the eccentricity-based invariants as independent variables, while the physico-chemical properties of sixteen drugs as dependent variables. The dependent variables include boiling point, enthalpy of vaporization, heavy atom count, molar volume, polarizability, complexity, molecular weight, and molar refractivity. The statistical analysis indicates that the most suitable structure-property models are nonlinear. The findings show that the eccentric Albertson index and the eccentric geometric arithmetic index attain superior predictive performance compared to other indices. The analysis shows that cubic regression is the optimal choice for predicting enthalpy of vaporization, molar refractivity, polarizability, and complexity. In contrast, quadratic regression is the best option for predicting molecular weight, while a linear model is most effective for assessing heavy atom count. Additionally, logarithmic regression is the most suitable choice for boiling point and molar volume. To validate the robustness of our regression models, we used them to assess the properties of five additional coronary artery disease drugs that were not part of the original dataset. The experimental values were compared with forecasted data, revealing a strong correlation between them. This demonstrates the reliability of our regression models in assessing these vital physicochemical parameters.
Keywords: Coronary artery disease drugs, QSPR modeling, Physio-chemical properties, Eccentricity-based invariants
Subject terms: Analytical chemistry, Theoretical chemistry
Introduction
Cheminformatics is a modern field involving Mathematics, Statistics, Physics, Biochemistry, Chemistry, Biology, and other informational sciences that concentrate on treating, analyzing, gathering, and storing chemical data. Cheminformatics is an influential application of information technology to help chemists analyze new problems as well as in understanding, investigating, and organizing scientific data to design unknown processes and compounds1,2. Molecular and chemical graphs play a vital role in virtual screening, computational drug design, quantitative structure-activity (QSAR), quantitative structure-property (QSPR) relationship studies, and chemoinformatics. Chemoinformatics uses graphs for various applications, including database searching and retrieval, physicochemical property prediction, chemical structure illustration, and coding. QSAR study, virtual screening, and QSPR analysis are built on the structure-property principle, which expresses that physicochemical properties and biological activity of chemical compounds can be predicted based on their chemical structure. Such structure-property associations are commonly developed from graph topological indices, fingerprints computed from the molecular graph, and molecular descriptors summed from the chemical structure3–6.
Chemical graph theory investigates the chemical and physical properties, including molar refraction, melting points, freezing points, boiling points, the octanol-water partition coefficient, the motor octane number, the acentric factor, surface tension and density, molar volume, heat of formation and solubility of the chemical graphs with the aid of mathematical models which are developed by the graph-theoretic techniques of graph theory. Cheminformatics approaches are also used to predict properties relevant to drug discovery and optimization. For example, knowledge discovery can be employed to determine lead mixtures in pharmaceutical data matching. This modern technological era concentrates on advancing chemical sciences, including designing diagnostic kits for different biological approaches and infections, drug discovery, and bond formation in chemical compounds. All these developments require powerful tools to make these advancements possible as they progress. An emerging tool for analyzing these phenomena is a topological index, which gives the same numerical value to two isomorphic chemical networks.
Numerous topological invariants are employed in QSPR/QSAR studies3,5, supplying insights into the underlying structures. Different kinds of graph invariants used for this purpose include polynomial, distance, spectral, and degree-based invariants. Among the various classes, distance-based invariants are valuable as they are used to deduce the physicochemical, biological, and pharmacological properties including toxicity, similarity, connectivity, melting point, boiling point, entropy, chirality, surface tension, stability, density, critical temperature, molecular weight, molar refractivity, polarizability, molar volume and the enthalpy of vaporization7–9. Kirmani et al.10 examined the degree-based topological invariants of COVID-19 medications, detecting good relationships with their properties. Liu et al.11 computed the distance-based invariants for antiviral drugs. Havare12 employed the M-polynomial approach to set up QSPR models for cancer drugs. Adnan et al.13 associated the degree-based invariants with properties of anti-tuberculosis drugs. Shanmukha et al.14 viewed anticancer drugs, establishing connections between topological invariants and chemical characteristics. Zaman et al.15 developed QSPR models to forecast molecular properties utilizing a linear regression model. Ravi and Desikan16 operated reduced reverse degree-based invariants to develop QSPR models for hyaluronic acid-paclitaxel conjugates, showing strong predictive power. Gnanaraj et al.17 executed QSPR analysis on NSAID drugs, while Nasir et al.18 discussed blood cancer compounds. Further, QSPR modelling has been applied to study the drugs of infertility treatment drugs19, antitumor20, breast cancer21, anti-malarial22, Colorectal Cancer23, cardiovascular disease24, and HIV/AIDS25. These studies shows that QSPR analysis furnishes a novel technique for predictive modeling, enriching our understanding of how topological invariants can improve drug development and drug design. However, much of the QSPR research has concentrated on degree-based molecular descriptors, creating a gap in the exploration of eccentricity-based descriptors. This study handles this gap by presenting these indices and showing their strong correlation with drug properties, presenting a novel technique to predictive modeling and improving the accuracy of drug design beyond existing approaches. Our research combines machine learning regression strategies with topological invariants from hydrogen-depleted molecular graphs, concentrating on eccentricity-based descriptors. Our purpose is to improve the molecular interactions and enhance predictive modeling, eventually refining the drug design precision. This may aid in developing more useful generalised drugs for the under-considered disease.
Coronary artery disease is described by the formation of atherosclerosis in the coronary arteries, which can sometimes be asymptomatic. Coronary heart disease, also commonly known as ischemic heart disease, includes conditions such as silent myocardial ischemia, acute coronary syndrome, and stable angina. Deaths related to coronary heart disease are largely due to coronary artery disease. Acute coronary syndrome is generally symptomatic and possesses conditions such as myocardial infarction and unstable angina. Coronary artery disease is the leading cause of disability-adjusted life years (DALYs) lost and death worldwide. This issue mainly affects low- and middle-income countries, resulting in about 129 million DALYs and 7 million deaths annually. In 2015, there were 8.9 million deaths and 164.0 million DALYs globally due to coronary artery disease. Survivors of myocardial infarction have a much higher risk of recurrence, and they have an annual mortality rate 5 to 6 times greater than that of people without coronary artery disease26. Coronary artery disease is characterized by an insufficient supply of oxygen and blood to the myocardium. The symptoms occur due to the blockage of the coronary arteries, leading to a mismatch in the demand and supply of oxygen. Coronary artery disease is commonly caused by the formation of plaques in the lumen of coronary arteries that restrict blood flow. Coronary artery disease is the major cause of death worldwide. Coronary artery disease was an unusual cause of death at the start of the 20th century. Casualties due to coronary artery disease increased in the mid-1960s and then decreased. However, this sickness is still the leading cause of death worldwide27. The chance of death from coronary artery disease grows significantly with age. The modifiable risk factors include systolic blood pressure, which plays a vital role, as it contributes to the increased threat of coronary artery disease linked with ageing28–30. The following Table 1 shows some drugs that are commonly used to treat coronary artery disease and their molecular graphs are displayed in Fig. 1.
Table 1.
Coronary artery disease drugs with corresponding chemical structures and therapeutic uses.
| Drug name | Chemical structure | Therapeutic uses for coronary artery disease |
|---|---|---|
| Atorvastatin | ![]() |
Lowers cholesterol and prevents cardiovascular events by inhibiting HMG-CoA reductase, reducing LDL and triglycerides31. |
| Simvastatin | ![]() |
Lowers cholesterol and cardiovascular risk by blocking HMG-CoA reductase, reducing LDL and triglycerides32. |
| Rosuvastatin | ![]() |
Lowers cholesterol and cardiovascular risk by inhibiting HMG-CoA reductase33. |
| Aspirin | ![]() |
Prevents heart attacks and strokes via antiplatelet effects. Long-term use risks GI irritation and bleeding34,35. |
| Clopidogrel | ![]() |
Antiplatelet drug prevents cardiovascular events in atherosclerosis and post-stenting by inhibiting receptor36. |
| Metoprolol | ![]() |
-blocker treats angina, hypertension, arrhythmias; lowers heart rate, contractility, and oxygen demand37. |
| Atenolol | ![]() |
It is selective -blocker for hypertension, angina, and post- prevention; reduces heart rate and oxygen demand38. |
| Enalapril | ![]() |
ACE inhibitor treats hypertension and heart failure; inhibits angiotensin II conversion, causing vasodilation39. |
| Lisinopril | ![]() |
Long-acting ACE inhibitor for hypertension, heart failure, and post-myocardial infarction; reduces blood pressure and cardiac workload40. |
| Amlodipine | ![]() |
it treats for angina and hypertension; causes vasodilation41. |
| Diltiazem | ![]() |
it treats angina, hypertension, and arrhythmias; reduces contractility and causes vasodilation42. |
| Nitroglycerin | ![]() |
Nitrate vasodilator treats angina and heart failure; releases NO to relax vessels and improve coronary blood flow43,44. |
| Isosorbide dinitrate | ![]() |
Nitrate for angina prevention; vasodilates via NO release, reducing cardiac workload45. |
| Ranolazine | ![]() |
Treats chronic angina by blocking late sodium current, reducing calcium overload and oxygen demand46. |
| Gemfibrozil | ![]() |
Fibrate for hyperlipidemia; lowers triglycerides and raises HDL to reduce cardiovascular risk47. |
| Fenofibrate | ![]() |
Fibrate treats hypertriglyceridemia and hyperlipidemia, lowering cardiovascular risk, especially in metabolic syndrome48. |
Fig. 1.
Coronary artery disease drugs: (a) Atorvastatin, (b) Simvastatin, (c) Rosuvastatin, (d) Aspirin, (e) Clopidogrel, (f) Metoprolol, (g) Atenolol, (h) Enalapril, (i) Lisinopril, (j) Amlodipine, (k) Diltiazem, (l) Nitroglycerin, (m) Isosorbide dinitrate, (n) Ranolazine, (o) Gemfibrozil, (p) Fenofibrate.
Materials and methods
This study begins by gathering data on the physicochemical properties of drugs used for coronary artery disease. The physico-chemical properties for drug compounds are displayed in the Table 2, which are gathered from ChemSpider49 and PubChem50.
Table 2.
Physico-chemical properties of drugs.
| Drugs | MW (g/mol) |
HAC | CO | BP
|
ENV (kj/mol) |
MR
|
PO
|
MV
|
|---|---|---|---|---|---|---|---|---|
| Atorvastatin | 558.6 | 41 | 822 | 722.2 | 110.7 | 155.2 | 61.5 | 451.9 |
| Simvastatin | 418.6 | 30 | 706 | 564.9 | 97.5 | 116.4 | 46.1 | 376.6 |
| Rosuvastatin | 481.5 | 33 | 767 | 745.6 | 114.1 | 120.0 | 47.6 | 351.9 |
| Aspirin | 180.16 | 13 | 212 | 321.4 | 59.5 | 44.5 | 17.7 | 139.6 |
| Clopidogrel | 321.8 | 21 | 381 | 423.7 | 67.8 | 85.5 | 33.9 | 244.3 |
| Metoprolol | 267.36 | 19 | 215 | 398.6 | 68.5 | 77.1 | 30.6 | 258.7 |
| Atenolol | 266.34 | 19 | 263 | 508.0 | 82.0 | 74.3 | 29.4 | 236.7 |
| Enalapril | 376.4 | 27 | 519 | 582.4 | 91.6 | 99.5 | 39.5 | 312.6 |
| Lisinopril | 405.5 | 29 | 550 | 666.4 | 102.9 | 107.5 | 42.6 | 323.9 |
| Amlodipine | 408.9 | 28 | 647 | 527.2 | 80.2 | 105.4 | 41.8 | 333.0 |
| Diltiazem | 414.5 | 29 | 565 | 594.4 | 88.6 | 115.2 | 45.7 | 327.6 |
| Nitroglycerin | 227.09 | 15 | 218 | 295.8 | 51.4 | 39.2 | 15.5 | 135.9 |
| Isosorbide dinitrate | 236.14 | 16 | 268 | 365.9 | 58.8 | 44.7 | 17.7 | 142.9 |
| Ranolazine | 427.5 | 31 | 531 | 624.1 | 97.2 | 122.1 | 48.4 | 364.0 |
| Gemfibrozil | 250.33 | 18 | 273 | 394.7 | 68.0 | 71.9 | 28.5 | 239.7 |
| Fenofibrate | 360.8 | 25 | 458 | 469.8 | 73.2 | 97.1 | 38.5 | 306.4 |
The methodology of this study assumes an organized strategy to analyze and forecast the physicochemical properties of coronary artery disease drugs through QSPR modeling, using eccentricity-based topological indices. We develop linear, quadratic, logarithmic, and cubic regression models to correlate the physicochemical properties of sixteen coronary artery disease drugs structures by considering eccentricity-based topological indices as independent variables and physicochemical properties as dependent variables. The linear, logarithmic, quadratic, and cubic regression models have the following mathematical expressions.
![]() |
1 |
![]() |
2 |
![]() |
3 |
![]() |
4 |
In the above Equations ((1)-(4)),
denotes the physico-chemical property, and
is the topological index value of the underlying structure. The constants
,
and
are the regression coefficients and
is a constant.
Eccentricity-based topological invariants
Eccentricity-based topological invariants are essential for studying molecular structures, especially in network analysis and mathematical chemistry51 as they offer important information about molecular branching, stability, and general connectivity by encapsulating the extremal distances within a molecular framework52,53. The eccentricity of a vertex r in a molecular graph is represented as the greatest shortest path distance of r to any other vertex in the graph, which is the source of these indices. We denote the eccentricity of a vertex r with
We will now discuss several indices based on eccentricity that we utilize in our QSPR modeling. The eccentric version of first Zagreb index of a graph
was proposed by Vukičević and Graovac in54 as:
![]() |
Ghorbani and Hosseinzadeh55 introduced the second eccentric Zagreb index, which can be written as follows:
![]() |
In56, Ghorbani and Khaki defined the eccentric geometric arithmetic index of
as:
![]() |
The eccentric atom bond connectivity index was first given in57 as:
![]() |
The concept of sum-connectivity index was given in25, which is defined as:
![]() |
The Zaman et al. in25 gave the idea of the eccentricity inverse sum and eccentricity Albertson index, their mathematical expressions are as follows:
![]() |
Calculation of topological invariants
The eccentricity-based edge partitioning for the drugs of coronary artery disease is displayed in Tables 3 and 4. By using this edge partitioning, we aim to compute the eccentricity-based topological indices in this section. Let
, . . . ,
be the molecular graphs of atorvastatin, simvastatin, rosuvastatin, aspirin, clopidogrel, metoprolol, atenolol, enalapril, lisinopril, amlodipine, diltiazem, nitroglycerin, isosorbide dinitrate, ranolazine, gemfibrozil, and fenofibrate respectively.
Table 3.
Edge partitioning of drug compounds based on eccentricities.
| Edges | Atorvastatin | Simvastatin | Rosuvastatin | Aspirin | Clopidogrel | Metoprolol | Atenolol | Enalapril | Lisinopril |
|---|---|---|---|---|---|---|---|---|---|
![]() |
![]() |
![]() |
![]() |
![]() |
![]() |
![]() |
![]() |
![]() |
![]() |
| (16,15) | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| (15,14) | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| (14,13) | 7 | 0 | 6 | 0 | 0 | 3 | 0 | 0 | 0 |
| (13,12) | 6 | 5 | 5 | 0 | 0 | 2 | 4 | 4 | 5 |
| (12,12) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 |
| (12,11) | 8 | 5 | 5 | 0 | 0 | 2 | 2 | 5 | 6 |
| (11,10) | 7 | 5 | 7 | 0 | 0 | 3 | 2 | 5 | 5 |
| (10,10) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| (10,9) | 5 | 4 | 6 | 0 | 0 | 3 | 4 | 4 | 4 |
| (9,9) | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| (9,8) | 3 | 7 | 3 | 0 | 4 | 3 | 3 | 5 | 5 |
| (8,7) | 0 | 4 | 2 | 0 | 7 | 3 | 3 | 3 | 3 |
| (7,7) | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 1 |
| (7,6) | 0 | 0 | 0 | 0 | 6 | 0 | 0 | 0 | 0 |
| (6,5) | 0 | 0 | 0 | 6 | 4 | 0 | 0 | 0 | 0 |
| (5,5) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| (5,4) | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 |
| (4,3) | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 |
Table 4.
Edge partitioning of drug compounds based on eccentricities.
| Edges | Amlodipine | Diltiazem | Nitroglycerin | Isosorbide dinitrate | Ranolazine | Gemfibrozil | Fenofibrate |
|---|---|---|---|---|---|---|---|
|
|
|
|
|
|
|
|
| (18,17) | 0 | 0 | 0 | 0 | 5 | 0 | 0 |
| (17,16) | 0 | 0 | 0 | 0 | 7 | 0 | 0 |
| (16,15) | 0 | 0 | 0 | 0 | 4 | 0 | 0 |
| (15,14) | 0 | 0 | 0 | 0 | 2 | 0 | 3 |
| (14,13) | 0 | 0 | 0 | 0 | 3 | 0 | 3 |
| (13,12) | 0 | 3 | 0 | 0 | 3 | 0 | 4 |
| (12,11) | 0 | 2 | 0 | 0 | 2 | 0 | 5 |
| (11,10) | 4 | 5 | 0 | 0 | 3 | 0 | 3 |
| (10,9) | 7 | 7 | 0 | 0 | 4 | 5 | 2 |
| (9,9) | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| (9,8) | 5 | 7 | 0 | 4 | 0 | 6 | 4 |
| (8,8) | 0 | 0 | 0 | 0 | 0 | 0 | 2 |
| (8,7) | 7 | 4 | 4 | 2 | 0 | 3 | 0 |
| (7,7) | 1 | 2 | 0 | 0 | 0 | 0 | 0 |
| (7,6) | 4 | 0 | 4 | 2 | 0 | 2 | 0 |
| (6,6) | 1 | 0 | 0 | 2 | 0 | 0 | 0 |
| (6,5) | 0 | 0 | 3 | 4 | 0 | 2 | 0 |
| (5,5) | 0 | 0 | 0 | 3 | 0 | 0 | 0 |
| (5,4) | 0 | 0 | 3 | 0 | 0 | 0 | 0 |
To show the computation of eccentricity-based indices, we considered ranolazine (
) as the reference structure.
-
i.By using the first and second eccentric Zagreb indices and Table 4, we have

-
ii.By using the eccentric geometric arithmetic index and Table 4, we have

-
iiiBy using the eccentric atom bond connectivity index and Table 4, we have

-
ivBy using the eccentric sum-connectivity index and Table 4, we have

-
vBy using the eccentric ISI index and Table 4, we have

-
viBy using the eccentricity Albertson index and Table 4, we have

The values of eccentricity-based topological invariants for other medications are shown in the Tables 5 and 6.
Table 5.
Eccentricity based topological indices for drug molecules.
| Drug molecules | ![]() |
![]() |
![]() |
![]() |
![]() |
![]() |
![]() |
|---|---|---|---|---|---|---|---|
| Atorvastatin | 1047 | 6392 | 43.958899 | 17.431132 | 9.116591 | 261.286868 | 43 |
| Simvastatin | 632 | 3208 | 31.959034 | 13.792269 | 7.284833 | 157.613889 | 30 |
| Rosuvastatin | 744 | 4170 | 33.961252 | 13.987772 | 7.345297 | 185.600365 | 34 |
| Aspirin | 123 | 296 | 12.919617 | 7.589259 | 4.276295 | 30.395382 | 13 |
| Clopidogrel | 323 | 1158 | 22.943160 | 11.470044 | 6.199611 | 80.368216 | 21 |
| Metoprolol | 393 | 2106 | 18.975020 | 8.042943 | 4.239484 | 98.011177 | 19 |
| Atenolol | 374 | 1901 | 18.975226 | 8.212897 | 4.340592 | 93.267702 | 18 |
| Enalapril | 564 | 2915 | 27.965522 | 11.960036 | 6.309985 | 140.669967 | 26 |
Table 6.
Eccentricity based topological indices for drug molecules.
| Drug molecules | ![]() |
![]() |
![]() |
![]() |
![]() |
![]() |
![]() |
|---|---|---|---|---|---|---|---|
| Lisinopril | 612 | 3203 | 29.963776 | 12.742872 | 6.718499 | 152.649098 | 28 |
| Amlodipine | 485 | 2075 | 28.949677 | 13.428558 | 7.164189 | 120.843157 | 27 |
| Diltiazem | 584 | 2819 | 30.959314 | 13.626448 | 7.214798 | 145.627024 | 28 |
| Nitroglycerin | 172 | 542 | 13.948251 | 7.392305 | 4.046730 | 42.704895 | 14 |
| Isosorbide dinitrate | 222 | 751 | 16.966135 | 8.754938 | 4.773319 | 55.278473 | 12 |
| Ranolazine | 929 | 6782 | 32.976175 | 12.159509 | 6.320205 | 231.943893 | 33 |
| Gemfibrozil | 290 | 1194 | 17.961799 | 8.476094 | 4.534612 | 72.212059 | 18 |
| Fenofibrate | 584 | 3386 | 25.975126 | 10.594982 | 5.560636 | 145.731159 | 24 |
Results and discussions
To determine the most suitable topological index for forecasting molecular properties, we perform regression analysis using the R language and SPSS, employing cubic, linear, logarithmic, and quadratic models. For each index, we evaluate the statistical significance of the models by examining metrics such as p-values, standard error, F-statistic,
, and adjusted
. We aim to specify the model that provides the most robust forecasting. The best-performing model is validated by comparing predicted versus actual values. Our selection criteria focus on achieving the highest adjusted
values, the lowest standard error, and statistical effectiveness with
. This approach offers a data-driven strategy that strikes a balance between clarity and accuracy.
Analysis of regression models for the molecular weight
Table 7 displays the
values and adjusted
values of cubic, quadratic, logarithmic, and linear regression models by assuming the sets of values of eccentricity-based invariants as independent variables and the set of values of molecular weight of sixteen drugs as the dependent variable. Figure 2 illustrates a graphical comparison of the adjusted
values for these regression models. When we analyse the adjusted
values given in Table 7, it is easy to observe that
and
invariants provide the best values within the linear model, while the other invariants achieve their most suitable fits in the quadratic model. Table 8 displays the statistical analysis of the best regression models for each independent variable. This analysis possesses the p value, standard error, F-statistic, correlation coefficient r,
, adjusted
, and regression equation. This statistical examination signifies that the eccentric geometric arithmetic index is the most predictive index utilizing a quadratic model.
Table 7.
Comparison of
and adjusted
-values for different regression models for MW.
| Topological | Linear | Logarithmic | Quadratic | Cubic | ||||
|---|---|---|---|---|---|---|---|---|
| Index | ![]() |
Adjusted
|
![]() |
Adjusted
|
![]() |
Adjusted
|
![]() |
Adjusted
|
![]() |
0.874299 | 0.865320 | 0.856989 | 0.846774 | 0.890339 | 0.873469 | 0.890459 | 0.863073 |
![]() |
0.724687 | 0.705021 | 0.772221 | 0.755951 | 0.810052 | 0.780830 | 0.822879 | 0.778599 |
![]() |
0.985043 | 0.983974 | 0.967256 | 0.964917 | 0.986685 | ![]() |
0.987197 | 0.983997 |
![]() |
0.933879 | 0.929156 | 0.927867 | 0.922715 | 0.934719 | 0.924675 | 0.935251 | 0.919064 |
![]() |
0.907758 | 0.901169 | 0.900360 | 0.893243 | 0.908118 | 0.893982 | 0.908301 | 0.885377 |
![]() |
0.873845 | 0.864834 | 0.856012 | 0.845728 | 0.889872 | 0.872929 | 0.889983 | 0.862479 |
![]() |
0.962844 | 0.960189 | 0.942226 | 0.938099 | 0.965824 | 0.960566 | 0.968124 | 0.960155 |
Fig. 2.
Comparison of adjusted
-values.
Table 8.
Best regression models for MW based on adjusted
values.
| Predictor | Goodness of Fit | Significance | Regression Equation | |||||
|---|---|---|---|---|---|---|---|---|
| Index | Model | r | ![]() |
Adj.
|
Std. Error | F-statistic | p-value | |
![]() |
Quadratic | 0.993320 | 0.986685 | 0.984636 | 12.980935 | 4.82e+02 | 6.43e-13 | ![]() |
![]() |
Quadratic | 0.982764 | 0.965824 | 0.960566 | 20.796562 | 1.84e+02 | 2.95e-10 | ![]() |
![]() |
Linear | 0.966374 | 0.933879 | 0.929156 | 27.874683 | 1.98e+02 | 1.19e-09 | ![]() |
![]() |
Linear | 0.952763 | 0.907758 | 0.901169 | 32.923394 | 1.38e+02 | 1.24e-08 | ![]() |
![]() |
Quadratic | 0.943578 | 0.890339 | 0.873469 | 37.252667 | 5.28e+01 | 5.76e-07 | ![]() |
![]() |
Quadratic | 0.943330 | 0.889872 | 0.872929 | 37.332017 | 5.25e+01 | 5.92e-07 | ![]() |
![]() |
Quadratic | 0.900029 | 0.810052 | 0.780830 | 49.028568 | 2.77e+01 | 2.05e-05 |
(8e-06)
|
The comparison of the actual and the predicted values of molecular weights of drugs by using the best forecasted index is illustrated in Table 9. The related graphical comparison is displayed in Fig. 3.
Table 9.
Predicted vs Actual values for MW using the overall best model.
| Sample | Actual Value | Predicted Value | Residual | Sample | Actual Value | Predicted Value | Residual |
|---|---|---|---|---|---|---|---|
![]() |
558.60 | 562.3052 | −3.705164 | ![]() |
405.50 | 406.5006 | −1.000645 |
![]() |
418.60 | 429.9467 | −11.346731 | ![]() |
408.90 | 394.4269 | 14.473137 |
![]() |
481.50 | 453.0623 | 28.437686 | ![]() |
414.50 | 418.2504 | −3.750384 |
![]() |
180.16 | 189.5003 | −9.340299 | ![]() |
227.09 | 203.4451 | 23.644881 |
![]() |
321.80 | 320.7415 | 1.058469 | ![]() |
236.14 | 243.7284 | −7.588429 |
![]() |
267.36 | 270.0232 | −2.663248 | ![]() |
427.50 | 441.7412 | −14.241224 |
![]() |
266.34 | 270.0259 | −3.685923 | ![]() |
250.33 | 256.8129 | −6.482901 |
![]() |
376.40 | 382.6083 | −6.208289 | ![]() |
360.80 | 358.4009 | 2.399063 |
Fig. 3.
Actual and predicted values for molecular weight.
Analysis of regression models for the heavy atom count
Table 10 provides the
values and adjusted
values of cubic, quadratic, logarithmic, and linear regression models by assuming the sets of values of eccentricity-based invariants as independent variables and the set of values of heavy atom count of sixteen drugs as the dependent variable. Figure 4 illustrates a graphical comparison of the adjusted
values for these regression models. When we analyse the adjusted
values given in Table 10, it is easy to observe that
,
and
invariants provide the best values within the quadratic model, while the other invariants achieve their most suitable fits in the linear model. Table 11 displays the statistical analysis of the best regression models for each independent variable. This analysis possesses the p value, standard error, F-statistic, correlation coefficient r,
, adjusted
, and regression equation. This statistical examination shows that the eccentric geometric arithmetic index is the most predictive index utilizing a linear model.
Table 10.
Comparison of
and adjusted
-values for different regression models for HAC.
| Topological | Linear | Logarithmic | Quadratic | Cubic | ||||
|---|---|---|---|---|---|---|---|---|
| Index | ![]() |
Adjusted
|
![]() |
Adjusted
|
![]() |
Adjusted
|
![]() |
Adjusted
|
![]() |
0.912235 | 0.905966 | 0.871588 | 0.862415 | 0.920070 | 0.907773 | 0.920436 | 0.900545 |
![]() |
0.772895 | 0.756673 | 0.793271 | 0.778505 | 0.842372 | 0.818122 | 0.852872 | 0.816090 |
![]() |
0.994521 | ![]() |
0.962680 | 0.960014 | 0.994528 | 0.993686 | 0.994817 | 0.993521 |
![]() |
0.919402 | 0.913645 | 0.904109 | 0.897259 | 0.919649 | 0.907287 | 0.921551 | 0.901939 |
![]() |
0.890092 | 0.882241 | 0.874160 | 0.865172 | 0.890751 | 0.873944 | 0.892221 | 0.865276 |
![]() |
0.911825 | 0.905526 | 0.870540 | 0.861293 | 0.919653 | 0.907292 | 0.920004 | 0.900005 |
![]() |
0.980917 | 0.979554 | 0.948883 | 0.945232 | 0.981329 | 0.978456 | 0.982312 | 0.977890 |
Fig. 4.
Comparison of adjusted
-values for heavy atom count.
Table 11.
Best regression models for HAC based on adjusted
values.
| Predictor | Goodness of Fit | Significance | Regression Equation | |||||
|---|---|---|---|---|---|---|---|---|
| Index | Model | r | ![]() |
Adj.
|
Std. Error | F-statistic | p-value | |
![]() |
Linear | 0.997257 | 0.994521 | 0.994130 | 0.588763 | 2541.230259 | 2.20e-16 | ![]() |
![]() |
Linear | 0.990413 | 0.980917 | 0.979554 | 1.098784 | 719.646188 | 1.95e-13 | ![]() |
![]() |
Linear | 0.958855 | 0.919402 | 0.913645 | 2.258151 | 159.702170 | 4.80e-09 | ![]() |
![]() |
Quadratic | 0.959203 | 0.920070 | 0.907773 | 2.333662 | 74.821510 | 7.37e-08 |
(9e-06)
|
![]() |
Quadratic | 0.958986 | 0.919653 | 0.907292 | 2.339741 | 74.399489 | 7.63e-08 | ![]() |
![]() |
Linear | 0.943447 | 0.890092 | 0.882241 | 2.636980 | 113.378882 | 4.27e-08 | ![]() |
![]() |
Quadratic | 0.917808 | 0.842372 | 0.818122 | 3.277180 | 34.736386 | 6.09e-06 |
(1e-06)
|
The comparison of the actual and the predicted values of heavy atom count of drugs by using the best forecasted index is illustrated in Table 12. The related graphical comparison is displayed in Fig. 5.
Table 12.
Predicted vs Actual values for HAC using the overall best model.
| Sample | Actual Value | Predicted Value | Residual | Sample | Actual Value | Predicted Value | Residual |
|---|---|---|---|---|---|---|---|
![]() |
41 | 41.13679 | −0.136790 | ![]() |
29 | 28.56009 | 0.439906 |
![]() |
30 | 30.35313 | −0.353129 | ![]() |
28 | 27.64878 | 0.351225 |
![]() |
33 | 32.15242 | 0.847580 | ![]() |
29 | 29.45473 | −0.454733 |
![]() |
13 | 13.24339 | −0.243386 | ![]() |
15 | 14.16777 | 0.832234 |
![]() |
21 | 22.25103 | −1.251028 | ![]() |
16 | 16.87978 | −0.879783 |
![]() |
19 | 18.68507 | 0.314935 | ![]() |
31 | 31.26718 | −0.267182 |
![]() |
19 | 18.68525 | 0.314750 | ![]() |
18 | 17.77454 | 0.225465 |
![]() |
27 | 26.76437 | 0.235634 | ![]() |
25 | 24.97570 | 0.024301 |
Fig. 5.
Actual and predicted values for heavy atom count.
Analysis of regression models for the complexity
Table 13 provides the
values and adjusted
values of cubic, quadratic, logarithmic, and linear regression models by assuming the sets of values of eccentricity-based invariants as independent variables and the set of values of complexity of sixteen drugs as the dependent variable. Figure 6 illustrates a graphical comparison of the adjusted
values for these regression models. When we analyse the adjusted
values given in Table 13, it is easy to observe that
and
invariants provide the best values within the quadratic model, while the other invariants achieve their most suitable fits in the cubic model. Table 14 displays the statistical analysis of the best regression models for each independent variable. This analysis possesses the p value, standard error, F-statistic, correlation coefficient r,
, adjusted
, and regression equation. This statistical examination tells us that the eccentric atom bond connectivity index is the most predictive index utilizing a cubic model.
Table 13.
Comparison of
and adjusted
-values for different regression models for CO.
| Topological | Linear | Logarithmic | Quadratic | Cubic | ||||
|---|---|---|---|---|---|---|---|---|
| Index | ![]() |
Adjusted
|
![]() |
Adjusted
|
![]() |
Adjusted
|
![]() |
Adjusted
|
![]() |
0.714386 | 0.693985 | 0.693771 | 0.671898 | 0.736900 | 0.696423 | 0.749029 | 0.686286 |
![]() |
0.546616 | 0.514231 | 0.590441 | 0.561187 | 0.654342 | 0.601164 | 0.712258 | 0.640322 |
![]() |
0.902905 | 0.895969 | 0.878777 | 0.870118 | 0.905060 | 0.890454 | 0.928945 | 0.911182 |
![]() |
0.937246 | 0.932764 | 0.933147 | 0.928372 | 0.940206 | 0.931007 | 0.952524 | ![]() |
![]() |
0.928776 | 0.923689 | 0.927047 | 0.921836 | 0.932090 | 0.921643 | 0.940695 | 0.925869 |
![]() |
0.713747 | 0.693301 | 0.692581 | 0.670622 | 0.736236 | 0.695657 | 0.748462 | 0.685578 |
![]() |
0.867144 | 0.857654 | 0.840637 | 0.829253 | 0.870616 | 0.850711 | 0.899973 | 0.874966 |
Fig. 6.
Comparison of adjusted
-values for complexity.
Table 14.
Best regression models for CO based on adjusted
values.
| Predictor | Goodness of Fit | Significance | Regression Equation | |||||
|---|---|---|---|---|---|---|---|---|
| Index | Model | r | ![]() |
Adj.
|
Std. Error | F-statistic | p-value | |
![]() |
Cubic | −0.975973 | 0.952524 | 0.940655 | 50.528602 | 80.252925 | 3.29e-08 | ![]() |
![]() |
Cubic | −0.969894 | 0.940695 | 0.925869 | 56.473556 | 63.448032 | 1.24e-07 | ![]() |
![]() |
Cubic | −0.963818 | 0.928945 | 0.911182 | 61.815260 | 52.294782 | 3.66e-07 | ![]() |
![]() |
Cubic | −0.948669 | 0.899973 | 0.874966 | 73.342963 | 35.989194 | 2.81e-06 | ![]() |
![]() |
Quadratic | 0.858429 | 0.736900 | 0.696423 | 114.282391 | 18.205416 | 1.70e-04 | ![]() |
![]() |
Quadratic | 0.858042 | 0.736236 | 0.695657 | 114.426544 | 18.143208 | 1.73e-04 | ![]() |
![]() |
Cubic | −0.843954 | 0.712258 | 0.640322 | 124.394602 | 9.901334 | 0.001444 | ![]() |
The comparison of the actual and the predicted values of complexity of drugs by using the best forecasted index is illustrated in Table 15. The related graphical comparison is displayed in Fig. 7.
Table 15.
Predicted vs Actual values for CO using the overall best model.
| Sample | Actual Value | Predicted Value | Residual | Sample | Actual Value | Predicted Value | Residual |
|---|---|---|---|---|---|---|---|
![]() |
822 | 828.9449 | −6.944899 | ![]() |
550 | 579.4878 | −29.487787 |
![]() |
706 | 668.2950 | 37.705025 | ![]() |
647 | 638.5343 | 8.465707 |
![]() |
767 | 683.6907 | 83.309348 | ![]() |
565 | 654.8937 | −89.893685 |
![]() |
212 | 224.8317 | −12.831685 | ![]() |
218 | 221.6271 | −3.627067 |
![]() |
381 | 466.2723 | −85.272284 | ![]() |
268 | 266.5948 | 1.405189 |
![]() |
215 | 236.6888 | −21.688792 | ![]() |
531 | 527.6011 | 3.398949 |
![]() |
263 | 242.6386 | 20.361353 | ![]() |
273 | 253.3600 | 19.639958 |
![]() |
519 | 509.7713 | 9.228716 | ![]() |
458 | 391.7680 | 66.231954 |
Fig. 7.
Actual and predicted values for complexity.
Analysis of regression models for the boiling point
Table 16 provides the
values and adjusted
values of cubic, quadratic, logarithmic, and linear regression models by assuming the sets of values of eccentricity-based invariants as independent variables and the set of values of boiling point of sixteen drugs as the dependent variable. Figure 8 illustrates a graphical comparison of the adjusted
values for these regression models. When we analyse the adjusted
values given in Table 16, we see that
and
provide best values within the quadratic model,
and
give best values within the cubic model, while the other invariants achieve their most suitable fits in the logarithmic model. Table 17 displays the statistical analysis of the best regression models for each independent variable. This analysis possesses the p value, standard error, F-statistic, correlation coefficient r,
, adjusted
, and regression equation. This statistical examination signifies that the eccentric geometric arithmetic index is the most predictive index utilizing a logarithmic model.
Table 16.
Comparison of
and adjusted
-values for different regression models for BP.
| Topological | Linear | Logarithmic | Quadratic | Cubic | ||||
|---|---|---|---|---|---|---|---|---|
| Index | ![]() |
Adjusted
|
![]() |
Adjusted
|
![]() |
Adjusted
|
![]() |
Adjusted
|
![]() |
0.803841 | 0.789830 | 0.815672 | 0.802506 | 0.845792 | 0.822068 | 0.852620 | 0.815775 |
![]() |
0.680966 | 0.658178 | 0.760167 | 0.743037 | 0.813062 | 0.784302 | 0.830574 | 0.788217 |
![]() |
0.848465 | 0.837642 | 0.853974 | ![]() |
0.861418 | 0.840098 | 0.867917 | 0.834896 |
![]() |
0.750877 | 0.733082 | 0.760776 | 0.743688 | 0.760995 | 0.724225 | 0.761306 | 0.701633 |
![]() |
0.718354 | 0.698236 | 0.725830 | 0.706247 | 0.726539 | 0.684468 | 0.727312 | 0.659140 |
![]() |
0.803609 | 0.789581 | 0.814910 | 0.801689 | 0.845548 | 0.821786 | 0.852449 | 0.815561 |
![]() |
0.842582 | 0.831338 | 0.842332 | 0.831070 | 0.856414 | 0.834324 | 0.872757 | 0.840946 |
Fig. 8.
Comparison of adjusted
-values for boiling point.
Table 17.
Best regression models for BP based on adjusted
values.
| Predictor | Goodness of Fit | Significance | Regression Equation | |||||
|---|---|---|---|---|---|---|---|---|
| Index | Model | r | ![]() |
Adj.
|
Std. Error | F-statistic | p-value | |
![]() |
Logarithmic | 0.924107 | 0.853974 | 0.843543 | 55.050756 | 81.873217 | 3.18e-07 | ![]() |
![]() |
Cubic | −0.934215 | 0.872757 | 0.840946 | 55.505753 | 27.435952 | 1.17e-05 | ![]() |
![]() |
Quadratic | 0.919670 | 0.845792 | 0.822068 | 58.707505 | 35.650878 | 5.28e-06 | ![]() |
![]() |
Quadratic | 0.919537 | 0.845548 | 0.821786 | 58.754019 | 35.584165 | 5.34e-06 | ![]() |
![]() |
Cubic | 0.911358 | 0.830574 | 0.788217 | 64.048857 | 19.609123 | 6.41e-05 | ![]() |
![]() |
Logarithmic | 0.872225 | 0.760776 | 0.743688 | 70.461293 | 44.522472 | 1.06e-05 | ![]() |
![]() |
Logarithmic | 0.851957 | 0.725830 | 0.706247 | 75.432358 | 37.063256 | 2.80e-05 | ![]() |
The comparison of the actual and the predicted values of boiling point of drugs by using the best forecasted index is illustrated in Table 18. The related graphical comparison is displayed in Fig. 9.
Table 18.
Predicted vs Actual values for BP using the overall best model.
| Sample | Actual Value | Predicted Value | Residual | Sample | Actual Value | Predicted Value | Residual |
|---|---|---|---|---|---|---|---|
![]() |
722.2 | 731.7384 | −9.538355 | ![]() |
666.4 | 591.0799 | 75.320112 |
![]() |
564.9 | 614.7388 | −49.838784 | ![]() |
527.2 | 578.4440 | −51.244037 |
![]() |
745.6 | 637.0396 | 108.560358 | ![]() |
594.4 | 603.0752 | −8.675165 |
![]() |
321.4 | 282.3442 | 39.055790 | ![]() |
295.8 | 310.4591 | −14.659054 |
![]() |
423.7 | 493.1022 | −69.402224 | ![]() |
365.9 | 382.3415 | −16.441513 |
![]() |
398.6 | 423.4103 | −24.810276 | ![]() |
624.1 | 626.2370 | −2.137044 |
![]() |
508.0 | 423.4143 | 84.585740 | ![]() |
394.7 | 403.2707 | −8.570745 |
![]() |
582.4 | 565.7507 | 16.649253 | ![]() |
469.8 | 538.6541 | −68.854056 |
Fig. 9.
Actual and predicted values for boiling point.
Analysis of regression models for the enthalpy of vaporization
Table 19 gives the
values and adjusted
values of cubic, quadratic, logarithmic, and linear regression models by assuming the sets of values of eccentricity-based invariants as independent variables and the set of values of enthalpy of vaporization of sixteen drugs as the dependent variable. Figure 10 illustrates a graphical comparison of the adjusted
values for these regression models. When we analyse the adjusted
values given in Table 19, we see that
provides best value within the linear model,
and
provide best values within the logarithmic model, while the other invariants achieve their most suitable fits in the cubic model. Table 20 displays the statistical analysis of the best regression models for each independent variable. This analysis possesses the p value, standard error, F-statistic, correlation coefficient r,
, adjusted
, and regression equation. This statistical examination tells us that the eccentric Albertson index is the most predictive index utilizing a cubic model.
Table 19.
Comparison of
and adjusted
-values for different regression models for ENV.
| Topological | Linear | Logarithmic | Quadratic | Cubic | ||||
|---|---|---|---|---|---|---|---|---|
| Index | ![]() |
Adjusted
|
![]() |
Adjusted
|
![]() |
Adjusted
|
![]() |
Adjusted
|
![]() |
0.788437 | 0.773325 | 0.783623 | 0.768168 | 0.822969 | 0.795734 | 0.836827 | 0.796034 |
![]() |
0.673627 | 0.650315 | 0.733567 | 0.714536 | 0.800774 | 0.770124 | 0.827186 | 0.783983 |
![]() |
0.817257 | 0.804204 | 0.811346 | 0.797871 | 0.824070 | 0.797004 | 0.837810 | 0.797263 |
![]() |
0.712015 | 0.691445 | 0.714198 | 0.693784 | 0.716535 | 0.672925 | 0.720105 | 0.650131 |
![]() |
0.679569 | 0.656681 | 0.680322 | 0.657488 | 0.682991 | 0.634220 | 0.687486 | 0.609358 |
![]() |
0.788191 | 0.773061 | 0.782728 | 0.767209 | 0.822704 | 0.795428 | 0.836688 | 0.795859 |
![]() |
0.833111 | 0.821190 | 0.829741 | 0.817579 | 0.844390 | 0.820450 | 0.862343 | ![]() |
Fig. 10.
Comparison of adjusted
-values for enthalpy of vaporization.
Table 20.
Best regression models for ENV based on adjusted
values.
| Predictor | Goodness of Fit | Significance | Regression Equation | |||||
|---|---|---|---|---|---|---|---|---|
| Index | Model | r | ![]() |
Adj.
|
Std. Error | F-statistic | p-value | |
![]() |
Cubic | −0.928624 | 0.862343 | 0.827929 | 7.971441 | 25.057825 | 1.87e-05 | ![]() |
![]() |
Linear | 0.904023 | 0.817257 | 0.804204 | 8.503258 | 62.610334 | 1.56e-06 | ![]() |
![]() |
Cubic | 0.914783 | 0.836827 | 0.796034 | 8.678847 | 20.513914 | 5.13e-05 | ![]() |
![]() |
Cubic | 0.914706 | 0.836688 | 0.795859 | 8.682565 | 20.492929 | 5.16e-05 | ![]() |
![]() |
Cubic | 0.909498 | 0.827186 | 0.783983 | 8.931564 | 19.146311 | 7.21e-05 | ![]() |
![]() |
Logarithmic | 0.845103 | 0.714198 | 0.693784 | 10.634015 | 34.985045 | 3.77e-05 | ![]() |
![]() |
Logarithmic | 0.824816 | 0.680322 | 0.657488 | 11.246601 | 29.794084 | 8.43e-05 | ![]() |
The comparison of the actual and the predicted values of enthalpy of vaporization of drugs by using the best forecasted index is illustrated in Table 21. The related graphical comparison is displayed in Fig. 11.
Table 21.
Predicted vs Actual values for ENV using the overall best model.
| Sample | Actual Value | Predicted Value | Residual | Sample | Actual Value | Predicted Value | Residual |
|---|---|---|---|---|---|---|---|
![]() |
110.7 | 111.54190 | −0.841905 | ![]() |
102.9 | 92.08564 | 10.814355 |
![]() |
97.5 | 97.15986 | 0.340135 | ![]() |
80.2 | 89.44396 | −9.243956 |
![]() |
114.1 | 105.83614 | 8.263859 | ![]() |
88.6 | 92.08564 | −3.485645 |
![]() |
59.5 | 58.64489 | 0.855105 | ![]() |
51.4 | 59.77348 | −8.373478 |
![]() |
67.8 | 73.55967 | −5.759672 | ![]() |
58.8 | 57.79462 | 1.005377 |
![]() |
68.5 | 68.79664 | −0.296644 | ![]() |
97.2 | 103.90784 | −6.707836 |
![]() |
82.0 | 66.61697 | 15.383031 | ![]() |
68.0 | 66.61697 | 1.383031 |
![]() |
91.6 | 86.76281 | 4.837189 | ![]() |
73.2 | 81.37295 | −8.172946 |
Fig. 11.
Actual and predicted values for enthalpy of vaporization.
Analysis of regression models for the molar refractivity
Table 22 provides the
values and adjusted
values of cubic, quadratic, logarithmic, and linear regression models by assuming the sets of values of eccentricity-based invariants as independent variables and the set of values of molar refractivity of sixteen drugs as the dependent variable. Figure 12 illustrates a graphical comparison of the adjusted
values for these regression models. When we analyse the adjusted
values given in Table 22, we see that
provides best value within the quadratic model,
gives best value within the linear model,
has the best value within the logarithmic model, while the other invariants achieve their most suitable fits in the cubic model. Table 23 displays the statistical analysis of the best regression models for each independent variable. This analysis possesses the p value, standard error, F-statistic, correlation coefficient r,
, adjusted
, and regression equation. This statistical examination signifies that the eccentric Albertson index is the most predictive index utilizing a cubic model.
Table 22.
Comparison of
and adjusted
-values for different regression models for MR.
| Topological | Linear | Logarithmic | Quadratic | Cubic | ||||
|---|---|---|---|---|---|---|---|---|
| Index | ![]() |
Adjusted
|
![]() |
Adjusted
|
![]() |
Adjusted
|
![]() |
Adjusted
|
![]() |
0.897725 | 0.890419 | 0.906348 | 0.899659 | 0.924093 | 0.912415 | 0.931142 | 0.913928 |
![]() |
0.765487 | 0.748736 | 0.839585 | 0.828127 | 0.860802 | 0.839387 | 0.860990 | 0.826237 |
![]() |
0.960663 | 0.957854 | 0.961736 | 0.959003 | 0.967005 | 0.961928 | 0.969759 | 0.962199 |
![]() |
0.868511 | 0.859119 | 0.869037 | 0.859683 | 0.870558 | 0.850643 | 0.879394 | 0.849243 |
![]() |
0.835144 | 0.823369 | 0.831532 | 0.819499 | 0.835845 | 0.810591 | 0.840504 | 0.800630 |
![]() |
0.897364 | 0.890033 | 0.905364 | 0.898604 | 0.923683 | 0.911942 | 0.930630 | 0.913287 |
![]() |
0.961233 | 0.958463 | 0.977055 | 0.975416 | 0.977164 | 0.973650 | 0.982530 | ![]() |
Fig. 12.
Comparison of adjusted
-values for Molar refractivity.
Table 23.
Best regression models for MR based on adjusted
values.
| Predictor | Goodness of Fit | Significance | Regression Equation | |||||
|---|---|---|---|---|---|---|---|---|
| Index | Model | r | ![]() |
Adj.
|
Std. Error | F-statistic | p-value | |
![]() |
Cubic | 0.991227 | 0.982530 | 0.978163 | 4.762799 | 224.970112 | 8.27e-11 | ![]() |
![]() |
Cubic | 0.984763 | 0.969759 | 0.962199 | 6.266424 | 128.270733 | 2.21e-09 | ![]() |
![]() |
Cubic | 0.964957 | 0.931142 | 0.913928 | 9.455796 | 54.090772 | 3.03e-07 | ![]() |
![]() |
Cubic | 0.964691 | 0.930630 | 0.913287 | 9.490926 | 53.661534 | 3.17e-07 | ![]() |
![]() |
Logarithmic | 0.932222 | 0.869037 | 0.859683 | 12.073184 | 92.900801 | 1.47e-07 | ![]() |
![]() |
Quadratic | 0.927794 | 0.860802 | 0.839387 | 12.916869 | 40.196041 | 2.71e-06 |
(2e-06)
|
![]() |
Linear | 0.913862 | 0.835144 | 0.823369 | 13.545661 | 70.922783 | 7.49e-07 | ![]() |
The comparison of the actual and the predicted values of molar refractivity of drugs by using the best forecasted index is illustrated in Table 24. The related graphical comparison is displayed in Fig. 13.
Table 24.
Predicted vs Actual values for MR using the overall best model.
| Sample | Actual Value | Predicted Value | Residual | Sample | Actual Value | Predicted Value | Residual |
|---|---|---|---|---|---|---|---|
![]() |
155.2 | 154.22907 | 0.970928 | ![]() |
107.5 | 108.57082 | −1.070823 |
![]() |
116.4 | 114.20733 | 2.192674 | ![]() |
105.4 | 105.63813 | −0.238130 |
![]() |
120.0 | 125.14759 | −5.147589 | ![]() |
115.2 | 108.57082 | 6.629177 |
![]() |
44.5 | 44.18539 | 0.314611 | ![]() |
39.2 | 50.46877 | −11.268771 |
![]() |
85.5 | 85.12853 | 0.371465 | ![]() |
44.7 | 37.50657 | 7.193431 |
![]() |
77.1 | 76.68259 | 0.417409 | ![]() |
122.1 | 122.40208 | −0.302081 |
![]() |
74.3 | 72.06419 | 2.235807 | ![]() |
71.9 | 72.06419 | −0.164193 |
![]() |
99.5 | 102.60139 | −3.101392 | ![]() |
97.1 | 96.13252 | 0.967477 |
Fig. 13.
Actual and predicted values for Molar refractivity.
Analysis of regression models for the polarizability
Table 25 provides the
values and adjusted
values of cubic, quadratic, logarithmic, and linear regression models by assuming the sets of values of eccentricity-based invariants as independent variables and the set of values of polarizability of sixteen drugs as the dependent variable. Figure 14 illustrates a graphical comparison of the adjusted
values for these regression models. When we analyse the adjusted
values given in Table 25, we see that
provides best value within the quadratic model,
gives best value within the linear model,
has the best value within the logarithmic model, while the other invariants achieve their most suitable fits in the cubic model. Table 26 displays the statistical analysis of the best regression models for each independent variable. This analysis possesses the p value, standard error, F-statistic, correlation coefficient r,
, adjusted
, and regression equation. This statistical examination signifies that the eccentric Albertson index is the most predictive index utilizing a cubic model.
Table 25.
Comparison of
and adjusted
-values for different regression models for PO.
| Topological | Linear | Logarithmic | Quadratic | Cubic | ||||
|---|---|---|---|---|---|---|---|---|
| Index | ![]() |
Adjusted
|
![]() |
Adjusted
|
![]() |
Adjusted
|
![]() |
Adjusted
|
![]() |
0.897353 | 0.890021 | 0.905979 | 0.899263 | 0.923848 | 0.912133 | 0.930764 | 0.913455 |
![]() |
0.765103 | 0.748325 | 0.839134 | 0.827644 | 0.860636 | 0.839195 | 0.860811 | 0.826013 |
![]() |
0.960430 | 0.957603 | 0.961601 | 0.958859 | 0.966848 | 0.961748 | 0.969535 | 0.961919 |
![]() |
0.868466 | 0.859071 | 0.869129 | 0.859781 | 0.870573 | 0.850661 | 0.879358 | 0.849198 |
![]() |
0.835155 | 0.823380 | 0.831691 | 0.819669 | 0.835895 | 0.810648 | 0.840544 | 0.800680 |
![]() |
0.896991 | 0.889633 | 0.904991 | 0.898205 | 0.923437 | 0.911658 | 0.930250 | 0.912813 |
![]() |
0.961100 | 0.958322 | 0.977127 | 0.975493 | 0.977191 | 0.973682 | 0.982521 | ![]() |
Fig. 14.
Comparison of adjusted
-values for Polarizability.
Table 26.
Best regression models for PO based on adjusted
values.
| Predictor | Goodness of Fit | Significance | Regression Equation | |||||
|---|---|---|---|---|---|---|---|---|
| Index | Model | r | ![]() |
Adj.
|
Std. Error | F-statistic | p-value | |
![]() |
Cubic | 0.991222 | 0.982521 | 0.978151 | 1.888591 | 224.845079 | 8.30e-11 | ![]() |
![]() |
Cubic | 0.984650 | 0.969535 | 0.961919 | 2.493319 | 127.299070 | 2.31e-09 | ![]() |
![]() |
Cubic | 0.964761 | 0.930764 | 0.913455 | 3.758760 | 53.773428 | 3.13e-07 | ![]() |
![]() |
Cubic | 0.964495 | 0.930250 | 0.912813 | 3.772682 | 53.347838 | 3.27e-07 | ![]() |
![]() |
Logarithmic | 0.932271 | 0.869129 | 0.859781 | 4.784400 | 92.975338 | 1.46e-07 | ![]() |
![]() |
Quadratic | 0.927704 | 0.860636 | 0.839195 | 5.123580 | 40.140327 | 2.74e-06 |
(1e-06)
|
![]() |
Linear | 0.913868 | 0.835155 | 0.823380 | 5.369623 | 70.928037 | 7.49e-07 | ![]() |
The comparison of the actual and the predicted values of polarizability of drugs by using the best forecasted index is illustrated in Table 27. The related graphical comparison is displayed in Fig. 15.
Table 27.
Predicted vs Actual values for PO using the overall best model.
| Sample | Actual Value | Predicted Value | Residual | Sample | Actual Value | Predicted Value | Residual |
|---|---|---|---|---|---|---|---|
![]() |
61.5 | 61.11459 | 0.385409 | ![]() |
42.6 | 43.04924 | −0.449242 |
![]() |
46.1 | 45.28386 | 0.816143 | ![]() |
41.8 | 41.88624 | −0.086241 |
![]() |
47.6 | 49.61778 | −2.017779 | ![]() |
45.7 | 43.04924 | 2.650758 |
![]() |
17.7 | 17.51328 | 0.186725 | ![]() |
15.5 | 20.00449 | −4.504490 |
![]() |
33.9 | 33.75051 | 0.149487 | ![]() |
17.7 | 14.86552 | 2.834481 |
![]() |
30.6 | 30.40022 | 0.199777 | ![]() |
48.4 | 48.53066 | −0.130656 |
![]() |
29.4 | 28.56838 | 0.831620 | ![]() |
28.5 | 28.56838 | −0.068380 |
![]() |
39.5 | 40.68182 | −1.181815 | ![]() |
38.5 | 38.11580 | 0.384203 |
Fig. 15.
Actual and predicted values for Polarizability.
Analysis of regression models for the molar volume
Table 28 provides the
values and adjusted
values of cubic, quadratic, logarithmic, and linear regression models by assuming the sets of values of eccentricity-based invariants as independent variables and the set of values of molar volume of sixteen drugs as the dependent variable. Figure 16 illustrates a graphical comparison of the adjusted
values for these regression models. When we analyse the adjusted
values given in Table 28, we see that
provides best value within the quadratic model,
gives best value within the linear model,
and
have the best values within the cubic model, while the other invariants achieve their most suitable fits in the logarithmic model. Table 29 displays the statistical analysis of the best regression models for each independent variable. This analysis possesses the p value, standard error, F-statistic, correlation coefficient r,
, adjusted
, and regression equation. This statistical examination shows that the eccentric Albertson index is the most predictive index utilizing a logarithmic model.
Table 28.
Comparison of
and adjusted
-values for different regression models for MV.
| Topological | Linear | Logarithmic | Quadratic | Cubic | ||||
|---|---|---|---|---|---|---|---|---|
| Index | ![]() |
Adjusted
|
![]() |
Adjusted
|
![]() |
Adjusted
|
![]() |
Adjusted
|
![]() |
0.877078 | 0.868298 | 0.916443 | 0.910475 | 0.922256 | 0.910295 | 0.932683 | 0.915853 |
![]() |
0.746801 | 0.728716 | 0.863104 | 0.853326 | 0.874375 | 0.855048 | 0.876738 | 0.845923 |
![]() |
0.922835 | 0.917324 | 0.936960 | 0.932457 | 0.935595 | 0.925687 | 0.940750 | 0.925938 |
![]() |
0.813248 | 0.799908 | 0.816353 | 0.803235 | 0.816331 | 0.788074 | 0.824273 | 0.780341 |
![]() |
0.775586 | 0.759557 | 0.772828 | 0.756601 | 0.776494 | 0.742108 | 0.779033 | 0.723792 |
![]() |
0.876800 | 0.868000 | 0.915662 | 0.909637 | 0.921932 | 0.909922 | 0.932224 | 0.915280 |
![]() |
0.931461 | 0.926565 | 0.965298 | ![]() |
0.960078 | 0.953936 | 0.969763 | 0.962203 |
Fig. 16.
Comparison of adjusted
-values for molar volume.
Table 29.
Best regression models for MV based on adjusted
values.
| Predictor | Goodness of Fit | Significance | Regression Equation | |||||
|---|---|---|---|---|---|---|---|---|
| Index | Model | r | ![]() |
Adj.
|
Std. Error | F-statistic | p-value | |
![]() |
Logarithmic | 0.982496 | 0.965298 | 0.962819 | 17.538671 | 389.436981 | 1.29e-11 | ![]() |
![]() |
Logarithmic | 0.967967 | 0.936960 | 0.932457 | 23.638944 | 208.081783 | 8.53e-10 | ![]() |
![]() |
Cubic | 0.965755 | 0.932683 | 0.915853 | 26.385002 | 55.420125 | 2.65e-07 |
(1e-06)
|
![]() |
Cubic | 0.965517 | 0.932224 | 0.915280 | 26.474750 | 55.017946 | 2.76e-07 | ![]() |
![]() |
Quadratic | 0.935080 | 0.874375 | 0.855048 | 34.629854 | 45.241353 | 1.39e-06 |
(8e-06)
|
![]() |
Logarithmic | 0.903523 | 0.816353 | 0.803235 | 40.347106 | 62.233226 | 1.61e-06 | ![]() |
![]() |
Linear | 0.880674 | 0.775586 | 0.759557 | 44.601067 | 48.384771 | 6.70e-06 | ![]() |
The comparison of the actual and the predicted values of molar volume of drugs by using the best forecasted index is illustrated in Table 30. The related graphical comparison is displayed in Fig. 17.
Table 30.
Predicted vs Actual values for MV using the overall best model.
| Sample | Actual Value | Predicted Value | Residual | Sample | Actual Value | Predicted Value | Residual |
|---|---|---|---|---|---|---|---|
![]() |
451.9 | 438.2576 | 13.642367 | ![]() |
323.9 | 333.8990 | −9.998976 |
![]() |
376.6 | 350.6824 | 25.917627 | ![]() |
333.0 | 325.0521 | 7.947917 |
![]() |
351.9 | 381.1299 | −29.229905 | ![]() |
327.6 | 333.8990 | −6.298976 |
![]() |
139.6 | 147.2544 | −7.654367 | ![]() |
135.9 | 165.2821 | −29.382077 |
![]() |
244.3 | 263.9166 | −19.616640 | ![]() |
142.9 | 127.7830 | 15.117043 |
![]() |
258.7 | 239.5701 | 19.129939 | ![]() |
364.0 | 373.8678 | −9.867791 |
![]() |
236.7 | 226.4175 | 10.282480 | ![]() |
239.7 | 226.4175 | 13.282480 |
![]() |
312.6 | 315.8713 | −3.271266 | ![]() |
306.4 | 296.3999 | 10.000144 |
Fig. 17.
Actual and predicted values for molar volume.
Validation
To validate the performance of our regression models, we considered five coronary artery disease drug structures: valsartan, sacubitril, rivaroxaban, perindopril, and ticagrelor. The molecular graphs of these drug structures are displayed in Fig. 18.
Fig. 18.
Chemical structures of the studied compounds: (a) Valsartan, (b) Sacubitril, (c) Rivaroxaban, (d) Perindopril, and (e) Ticagrelor.
The experimental values for physicochemical properties of these compounds were acquired from ChemSpider and PubChem and are outlined in Table 31. By using eccentricity-based edge-partitioning procedures, we computed the eccentricity-based invariants for drug structures (see Table 32) and used our regression models to forecast their properties. The predictive performance was estimated using MAE and RMSE. A comparison between the experimentally model-predicted and observed values (shown in Table 33) showed close alignment. These outcomes indicate that the linear, logarithmic, cubic, and quadratic regression models designed in this study act as reliable predictive means for assessing key physicochemical properties of coronary artery disease drug structures.
Table 31.
Physico-chemical properties of drugs.
| Drugs | MW (g/mol) |
HAC | CO | BP
|
ENV (kj/mol) |
MR
|
PO
|
MV
|
|---|---|---|---|---|---|---|---|---|
| Valsartan | 435.5 | 32 | 608 | 684.9 | 105.5 | 120.6 | 47.8 | 359.1 |
| Sacubitril | 411.5 | 30 | 550 | 656.9 | 101.6 | 113.6 | 45 | 357.4 |
| Rivaroxaban | 435.9 | 29 | 645 | 732.6 | 106.9 | 106.7 | 42.3 | 298.5 |
| Perindopril | 368.5 | 26 | 524 | 537.4 | 89.1 | 96.2 | 38.1 | 320.4 |
| Ticagrelor | 522.6 | 36 | 736 | 777.6 | 118.7 | 126.3 | 50.1 | 311.9 |
Table 32.
Topological Indices of Drug Molecules.
| Drug molecules | ![]() |
![]() |
![]() |
![]() |
![]() |
![]() |
![]() |
|---|---|---|---|---|---|---|---|
| Valsartan | 793 | 4749 | 33.969953 | 13.601934 | 7.123505 | 197.913319 | 31 |
| Sacubitril | 720 | 4298 | 30.970276 | 12.427407 | 6.508990 | 179.671143 | 30 |
| Rivaroxaban | 822 | 5474 | 31.977398 | 12.286244 | 6.410039 | 205.223735 | 28 |
| Perindopril | 500 | 2368 | 26.958165 | 11.963250 | 6.341157 | 124.637342 | 26 |
| Ticagrelor | 1041 | 6982 | 39.969904 | 15.230152 | 7.936053 | 259.883118 | 37 |
Table 33.
Experimental and Predicted Values with Error Metrics.
| Property | Drugs | ||||
|---|---|---|---|---|---|
| Valsartan | Sacubitril | Rivaroxaban | Perindopril | Ticagrelor | |
| Molecular weight | |||||
| Experimental | 435.5 | 411.5 | 435.9 | 368.5 | 522.6 |
| Predicted | 453.161382 | 418.3792 | 430.1606 | 370.4077 | 519.9526 |
| RMSE | 17.66 | 6.88 | 5.74 | 1.91 | 2.65 |
| MAE | 17.66 | 6.88 | 5.74 | 1.91 | 2.65 |
| Heavy atom count | |||||
| Experimental | 32 | 30 | 29 | 26 | 36 |
| Predicted | 32.160255 | 29.4646 | 30.3696 | 25.8591 | 37.5521 |
| RMSE | 0.16 | 0.54 | 1.37 | 0.14 | 1.55 |
| MAE | 0.16 | 0.54 | 1.37 | 0.14 | 1.55 |
| Complexity | |||||
| Experimental | 608 | 550 | 645 | 524 | 736 |
| Predicted | 652.887171 | 551.5214 | 538.9274 | 510.0584 | 768.0438 |
| RMSE | 44.89 | 1.52 | 106.07 | 13.94 | 32.04 |
| MAE | 44.89 | 1.52 | 106.07 | 13.94 | 32.04 |
| Boiling point | |||||
| Experimental | 684.9 | 656.9 | 732.6 | 537.4 | 777.6 |
| Predicted | 637.133657 | 603.2051 | 614.9496 | 552.2869 | 696.8263 |
| RMSE | 47.77 | 53.69 | 117.65 | 14.89 | 80.77 |
| MAE | 47.77 | 53.69 | 117.65 | 14.89 | 80.77 |
| Enthalpy of vaporization | |||||
| Experimental | 105.5 | 101.6 | 106.9 | 89.1 | 118.7 |
| Predicted | 99.544922 | 97.1599 | 92.0856 | 86.7628 | 110.3402 |
| RMSE | 5.96 | 4.44 | 14.81 | 2.34 | 8.36 |
| MAE | 5.96 | 4.44 | 14.81 | 2.34 | 8.36 |
| Molar Refractivity | |||||
| Experimental | 120.6 | 113.6 | 106.7 | 96.2 | 126.3 |
| Predicted | 116.954328 | 114.2073 | 108.5708 | 102.6014 | 133.7173 |
| RMSE | 3.65 | 0.61 | 1.87 | 6.40 | 7.42 |
| MAE | 3.65 | 0.61 | 1.87 | 6.40 | 7.42 |
| Polarizability | |||||
| Experimental | 47.8 | 45.0 | 42.3 | 38.1 | 50.1 |
| Predicted | 46.359014 | 45.2839 | 43.0492 | 40.6818 | 53.0088 |
| RMSE | 1.44 | 0.28 | 0.75 | 2.58 | 2.91 |
| MAE | 1.44 | 0.28 | 0.75 | 2.58 | 2.91 |
| Molar volume | |||||
| Experimental | 359.1 | 357.4 | 298.5 | 320.4 | 311.9 |
| Predicted | 358.658917 | 350.6824 | 333.8990 | 315.8713 | 401.6996 |
| RMSE | 0.44 | 6.72 | 35.40 | 4.53 | 89.80 |
| MAE | 0.44 | 6.72 | 35.40 | 4.53 | 89.80 |
Conclusion
Contributions
This study utilized the eccentricity-based edge partitioning approaches to compute the associated graph invariants of drugs used to treat coronary artery disease. In this examination, the cubic, quadratic, linear, and logarithmic models were developed, and their prediction performance was compared. The comparison showed that most of the physicochemical properties were best predicted using the cubic models. Quadratic regression analysis revealed the eccentric geometric arithmetic index as the top predictor of molecular weight, with the eccentric Albertson index a close second. The eccentric atom bond connectivity and eccentric sum connectivity indices also showed strong predictive ability in linear regression, ranking third and fourth, respectively. For the heavy atom count, linear regression analysis showed that the eccentric geometric arithmetic index was the best predictor, followed by the eccentric Albertson index. The eccentric atom bond connectivity index in linear regression, and eccentric first Zagreb index in quadratic regression, were third and fourth, respectively. For complexity, the eccentric atom bond connectivity index was the best predictor in cubic regression, followed by the eccentric sum connectivity index. The eccentric geometric arithmetic index and eccentric Albertson index were third and fourth, respectively. For the boiling point, logarithmic regression analysis showed that the eccentric geometric arithmetic index was the best forecaster, followed closely by the eccentric Albertson index in cubic regression. The eccentric first Zagreb index and eccentric inverse sum index in quadratic regression were third and fourth, respectively. For the enthalpy of vaporization, cubic regression analysis showed that the eccentric Albertson index was the top predictor, followed by the eccentric geometric arithmetic index in linear regression. The eccentric first Zagreb index and eccentric inverse sum index in cubic regression were third and fourth, respectively. For molar refractivity, and polarizability, cubic regression analysis showed that the eccentric Albertson index was the top predictor, followed by the eccentric geometric arithmetic index. The eccentric first Zagreb index and eccentric inverse sum index were third and fourth, respectively. For molar volume, logarithmic regression analysis showed that the eccentric Albertson index was the top predictor, followed closely by the eccentric geometric arithmetic index. The eccentric first Zagreb index and eccentric inverse sum index in cubic regression were third and fourth, respectively. These outcomes improve the development of drugs for coronary artery disease by helping the forecast of physicochemical properties, thereby helping more efficient optimization and identification of potential therapeutics.
Study implications
-
i.
Improved estimation exactness for molar refractivity, boiling points, and other fundamental physicochemical properties.
-
ii.
Suggested scalable tools for molecular screening and drug development.
-
iii.
Provided the cheminformatics applications in pharmaceuticals and material science.
Limitations
-
i.
The emphasis on eccentricity-based indices may overlook quantum chemical and steric effects, necessitating hybrid models for more broader applicability.
-
ii.
This analysis focuses solely on drugs that treat coronary artery disease, limiting generalizability to other classes of drugs.
-
iii.
Standard environmental prerequisites and simple regression models may not completely catch real-world molecular behavior.
-
iv.
A small dataset can increase the risk of overfitting in regression models, which makes it essential to utilize regularization strategies.
Future study
-
i.
Extend datasets to contain various molecular graphs.
-
ii.
Analyze further properties like pharmacokinetics, solubility, and toxicity.
-
iii.
Integrate machine learning for improved predict performance.
-
iv.
Examine real-world applications in advanced material design and drug discovery.
Acknowledgements
The authors extend their appreciation to the Deanship of Research and Graduate Studies at King Khalid University for funding this work through large group Research Project under grant number RGP2/87/46.
Author contributions
Conceptualization: NI, SA, AMA, ZI, AA, KAT; Methodology: NI, SA, ZI; Formal Analysis: SA, AMA, ZI, AA, KAT; Validation: NI, SA,AMA, ZI, AA, KAT; Writing original draft:SA, ZI, KAT; Writing review and editing: NI, SA, AMA, ZI, AA, KAT.
Data availability
All data generated or analysed during this study are included in this published article.
Declarations
Competing interests
The authors declare no competing interests.
Footnotes
Publisher’s note
Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Data Availability Statement
All data generated or analysed during this study are included in this published article.





































































































































































































































































































































































































































































































