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[Preprint]. 2025 Oct 15:2025.10.14.682414. [Version 1] doi: 10.1101/2025.10.14.682414

Dynamic BH3 profiling predicts clinical outcomes in acute myeloid leukemia

Emma-Jayne Minihane, Leah Krotee, Jason Wu, Lindsey Thornton, Geoffrey Fell, Sonja Herter, Jeremy Ryan, Amulya Jakkani, Kate Marinchev, Andrew A Lane, Marlise R Luskin, Eric S Winer, Evan C Chen, Shai Shimony, Martha Wadleigh, Rahul Vedula, Virginia O Volpe, Christopher Reilly, Ilene Galinsky, Daniel J DeAngelo, Richard M Stone, Donna S Neuberg, Anthony Letai, Jacqueline S Garcia
PMCID: PMC12632865  PMID: 41278625

Abstract

Predictive biomarkers can potentially meet the need for improved drug assignment in acute myeloid leukemia (AML). Fewer than half of AML patients have actionable mutations: consequently, targeted therapy achieves remission in only a fraction of those who have them. Dynamic BH3 Profiling (DBP), a functional assay, can measure changes in ex vivo drug-induced apoptotic priming in multiple cancers. To assess the feasibility and predictive capacity of DBP in AML, we prospectively tested DBP using a fixed-drug panel in myeloblasts from 92 patients. We generated a database combining genetic and functional annotation. Established AML clinical and genetic prognostic characteristics were associated with drug-induced apoptotic priming. We observed distinct inter patient sensitivities to single drugs or combinations with the BCL2-inhibitor venetoclax, and intra patient apoptotic priming differences based on CD123-expression within distinct cell subpopulations. DBP further predicted the likelihood of remission to chemotherapy and targeted agents, supporting its use to identify optimal personalized therapy.

Statement of significance

Dynamic BH3 profiling provides patient-specific drug vulnerability data in real-time to inform prognosis and therapy selection.

Key takeaways

  1. Dynamic BH3 profiling can be performed on bone marrow and leukemic blood from AML patients in 48 hours.

  2. Known clinical prognostic factors associate with drug-induced apoptotic priming in AML.

  3. Drug-induced apoptotic priming identifies drug vulnerabilities in individual patients and predicts clinical response to chemotherapy and small molecule inhibitors.

Full Text Availability

The license terms selected by the author(s) for this preprint version do not permit archiving in PMC. The full text is available from the preprint server.


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