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. 2025 Nov 4;91(12):e01403-25. doi: 10.1128/aem.01403-25

TABLE 2.

NreA variants tested in A. fabrum

Variant Mutagenesis plasmid Test plasmid Sequencea Mutagenesis
oligonucleotidesb
C089B NreA (wild type) pKJ213 pKJ257 MNERPHVHETHPAIIKRLKRADGHLRGIVEMIEAGRPCLDIAQQLHAVEKAIAQAKKTLIQDHLNHCLEDVVGPLALEQRRSIDEFKDITKYL oKJ608/609
R17A pKJ216 pKJ260 MNERPHVHETHPAIIKaLKRADGHLRGIVEMIEAGRPCLDIAQQLHAVEKAIAQAKKTLIQDHLNHCLEDVVGPLALEQRRSIDEFKDITKYL oKJ585/586
R20A pKJ255 pKJ267 MNERPHVHETHPAIIKRLKaADGHLRGIVEMIEAGRPCLDIAQQLHAVEKAIAQAKKTLIQDHLNHCLEDVVGPLALEQRRSIDEFKDITKYL oKJ610/611
C38A pKJ270 pKJ258 MNERPHVHETHPAIIKRLKRADGHLRGIVEMIEAGRPaLDIAQQLHAVEKAIAQAKKTLIQDHLNHCLEDVVGPLALEQRRSIDEFKDITKYL oKJ581/582
Q44A pKJ252 pKJ264 MNERPHVHETHPAIIKRLKRADGHLRGIVEMIEAGRPCLDIAQaLHAVEKAIAQAKKTLIQDHLNHCLEDVVGPLALEQRRSIDEFKDITKYL oKJ604/605
H63A pKJ215 pKJ259 MNERPHVHETHPAIIKRLKRADGHLRGIVEMIEAGRPCLDIAQQLHAVEKAIAQAKKTLIQDaLNHCLEDVVGPLALEQRRSIDEFKDITKYL oKJ583/584
H66A pKJ247 pKJ261 MNERPHVHETHPAIIKRLKRADGHLRGIVEMIEAGRPCLDIAQQLHAVEKAIAQAKKTLIQDHLNaCLEDVVGPLALEQRRSIDEFKDITKYL oKJ596/597
C67A pKJ253 pKJ265 MNERPHVHETHPAIIKRLKRADGHLRGIVEMIEAGRPCLDIAQQLHAVEKAIAQAKKTLIQDHLNHaLEDVVGPLALEQRRSIDEFKDITKYL oKJ606/607
K91A pKJ256 pKJ268 MNERPHVHETHPAIIKRLKRADGHLRGIVEMIEAGRPCLDIAQQLHAVEKAIAQAKKTLIQDHLNHCLEDVVGPLALEQRRSIDEFKDITaYL oKJ612/613
a

Sequence includes the entire NreA amino acid sequence for NreA variants used. Bold lowercase letters represent alanine substitutions compared to the C089B NreA (wild type).

b

Mutagenesis oligonucleotides were used to incorporate mutations in nreA via inverse-PCR amplification of pKJ213, followed by circularization, followed by transfer of the variant gene to pKJ227, as described in Materials and Methods. A. fabrum strains harboring these plasmids are listed in Table S1.