TABLE 2.
NreA variants tested in A. fabrum
| Variant | Mutagenesis plasmid | Test plasmid | Sequencea | Mutagenesis oligonucleotidesb |
|---|---|---|---|---|
| C089B NreA (wild type) | pKJ213 | pKJ257 | MNERPHVHETHPAIIKRLKRADGHLRGIVEMIEAGRPCLDIAQQLHAVEKAIAQAKKTLIQDHLNHCLEDVVGPLALEQRRSIDEFKDITKYL | oKJ608/609 |
| R17A | pKJ216 | pKJ260 | MNERPHVHETHPAIIKaLKRADGHLRGIVEMIEAGRPCLDIAQQLHAVEKAIAQAKKTLIQDHLNHCLEDVVGPLALEQRRSIDEFKDITKYL | oKJ585/586 |
| R20A | pKJ255 | pKJ267 | MNERPHVHETHPAIIKRLKaADGHLRGIVEMIEAGRPCLDIAQQLHAVEKAIAQAKKTLIQDHLNHCLEDVVGPLALEQRRSIDEFKDITKYL | oKJ610/611 |
| C38A | pKJ270 | pKJ258 | MNERPHVHETHPAIIKRLKRADGHLRGIVEMIEAGRPaLDIAQQLHAVEKAIAQAKKTLIQDHLNHCLEDVVGPLALEQRRSIDEFKDITKYL | oKJ581/582 |
| Q44A | pKJ252 | pKJ264 | MNERPHVHETHPAIIKRLKRADGHLRGIVEMIEAGRPCLDIAQaLHAVEKAIAQAKKTLIQDHLNHCLEDVVGPLALEQRRSIDEFKDITKYL | oKJ604/605 |
| H63A | pKJ215 | pKJ259 | MNERPHVHETHPAIIKRLKRADGHLRGIVEMIEAGRPCLDIAQQLHAVEKAIAQAKKTLIQDaLNHCLEDVVGPLALEQRRSIDEFKDITKYL | oKJ583/584 |
| H66A | pKJ247 | pKJ261 | MNERPHVHETHPAIIKRLKRADGHLRGIVEMIEAGRPCLDIAQQLHAVEKAIAQAKKTLIQDHLNaCLEDVVGPLALEQRRSIDEFKDITKYL | oKJ596/597 |
| C67A | pKJ253 | pKJ265 | MNERPHVHETHPAIIKRLKRADGHLRGIVEMIEAGRPCLDIAQQLHAVEKAIAQAKKTLIQDHLNHaLEDVVGPLALEQRRSIDEFKDITKYL | oKJ606/607 |
| K91A | pKJ256 | pKJ268 | MNERPHVHETHPAIIKRLKRADGHLRGIVEMIEAGRPCLDIAQQLHAVEKAIAQAKKTLIQDHLNHCLEDVVGPLALEQRRSIDEFKDITaYL | oKJ612/613 |
Sequence includes the entire NreA amino acid sequence for NreA variants used. Bold lowercase letters represent alanine substitutions compared to the C089B NreA (wild type).
Mutagenesis oligonucleotides were used to incorporate mutations in nreA via inverse-PCR amplification of pKJ213, followed by circularization, followed by transfer of the variant gene to pKJ227, as described in Materials and Methods. A. fabrum strains harboring these plasmids are listed in Table S1.