Summary.
At 5 years of age, 37% of children were sensitised to at least one allergen.
From 1 to 5 years of age, atopic sensitisation changed from predominantly food‐related to aeroallergen‐related.
Persistence of food sensitisation ranged from 6.3% to 37%, depending on the specific allergen.
To the Editor,
Vaccination with BacilleCalmette‐Guérin (BCG) has off‐target effects on the immune system which may influence the risk of developing allergic disease in later life. The Melbourne Infant Study: BCG for Allergy and Infection Reduction (MIS BAIR) randomised controlled trial (NCT01906853) investigated whether neonatal BCG vaccination reduces the incidence of allergy, eczema and infections at 1 and 5 years of age, and asthma at 5 years of age [1]. In the trial, neonatal BCG vaccination reduced the incidence of eczema at 1 year [2], particularly in children of parents with a history of eczema, but did not significantly reduce lower respiratory tract infections [3] or food allergy [4] at 1 year of age. At 5 years of age, neonatal BCG vaccination reduced the risk of more severe forms of asthma but had minimal effect on the overall incidence of asthma [5].
The MIS BAIR trial also aimed to investigate atopic sensitisation to a range of common allergens at 5 years of age. This required participants to attend a clinic visit for skin prick testing (SPT) at 5 years of age [1, 4]. In March 2020, COVID‐19 pandemic ‘lockdown’ measures in Melbourne (which included stay‐at‐home orders [6, 7]) prevented 5‐year SPT clinic visits being done for the following 12 months. During this period, 1124 (88%) of participants were eligible for their SPT clinic visit, with 62.7% (798/1272) only eligible after March 2020. To provide an opportunity for these participants to attend their SPT clinic visit after lockdown restrictions had eased, the age of eligibility for the SPT clinic visit was extended to 7 years of age. However, participants' families remained reluctant to visit a hospital setting during the pandemic and consequently, overall, only 34.2% (435/1272) attended a school‐age (5–7 years of age) SPT clinic visit (Figure 1A).
FIGURE 1.

Atopic sensitisation at 5–7 years. (A) CONSORT diagram for MIS BAIR atopic sensitisation at school‐age visit (5–7 years). Written/electronic consent was obtained from a parent/guardian prior to randomisation and for inclusion in Part 2. (B) Atopic sensitisation (allergen wheal ≥ 2 mm above negative control) for each core allergen at the 1‐year and school‐age (5–7‐year) visits for children who had a SPT at the school‐age visit. SPT 1 y ?/5 y + indicates allergens that were not tested or for which SPT was indeterminant at the 1‐year visit and were SPT positive at the school‐age visit. * indicates allergens only included as core allergens at the school‐age visit. (C) Atopic sensitisation at the school‐age visit by randomisation group. Data presented as a proportion of participants with non‐missing data for each outcome (i.e., positive for at least one allergen or non‐missing for all core allergens). BCG, Bacille Calmette‐Guérin; SPT, skin prick test; y, year.
In addition to the low follow‐up rate, there was a difference between the randomisation groups in the proportion of participants who did not attend an SPT clinic visit (58.6% (373/637) in the BCG group vs. 73.1% (464/635) in the Control group) (Figure 1A). This might be attributable to disappointment in being randomised to the Control group [8] as participants' families were not blinded to the randomisation group due to BCG vaccination site scarring. Despite the large proportion of missing data, the available SPT results and longitudinal testing provide valuable information in relation to the progression of atopic sensitisation in early life.
Among the 435 participants who attended, the median age at the SPT clinic visit was 64 months (IQR 61–68 months; range 60–87 months). Of these, 99.1% (431/435) had a valid SPT, and 90.6% (394/435) were tested against all the pre‐specified food (peanut, cashew nuts, hazelnut, walnut, raw egg, cow's milk, sesame and shellfish) and aero (dog, cat, house dust mite, rye grass and Alternaria tenuis ) allergens. Among participants with a valid SPT, 37.4% (161/431) had atopic sensitisation (wheal ≥ 2 mm above negative control) to at least one allergen. The majority of these participants had sensitisation to rye grass (62.1%, 100/161) and/or house dust mite (52.8%, 85/161) (Figure 1B). Sensitisation to more than one allergen was found in 19.0% (81/426) of participants with a valid SPT across multiple allergens, with 48 participants sensitised to 2, 16 to 3, 10 to 4 and 7 to 5 or more allergens, mostly grass (7/7), house dust mite (6/7), peanut (5/7), and egg (5/7).
Consistent with previous studies [9], sensitisation to food allergens decreased over time from 18.2% (198/1089) at 1 year to 10.9% (47/431) at 5–7 years of age (school‐age). This resulted from both fewer new and resolution of prior food sensitisation (Figure 1B). Persistence of sensitisation to food allergens between the one‐year and school‐age SPT visits varied between foods. Egg sensitisation decreased from 9.9% at 1 year to 2.3% at 5–7 years with only 13.3% of participants having persisting sensitisation. Similarly, hazelnut sensitisation only persisted for 6.3% of participants. For other food allergens, sensitisation persisted for 23%–37% of participants between the one‐year and school‐age visits (milk 23.1%, cashew 29.2%, sesame 33.3%, shellfish 33.3% and peanut 37.1%). In contrast, sensitisation to aeroallergens (rye grass, house dust mite, dog and cat) increased from an incidence of 5.0% (54/1089) at 1 year [4] to 34.8% (150/431) at 5–7 years of age (Figure 1B).
The incidence of atopic sensitisation to any core allergen was 38.8% in the BCG group (95/245) and 42.0% in the Control group (66/157) (Figure 1C). Given the large proportion of missing data and the imbalance between intervention groups, statistical comparison of the effects of BCG vaccination on atopic sensitisation at 5–7 years of age was not feasible.
We investigated the factors associated with non‐attendance at the school‐age visit and, as expected, found that it was associated with the visit being due after 1 March 2020 (χ 2 p < 0.001) and being randomised to the Control group (χ 2 p < 0.001). It was also associated with lower maternal education (χ 2 p < 0.001), attending childcare in the first year of life (χ 2 p = 0.005) and living more than 30 km from the clinic (χ 2 p = 0.02). Non‐attendance at the school‐age visit was not associated with other variables tested, including atopic sensitisation or eczema at 1 year of age, family history of allergic disease (allergy, eczema, hay fever or asthma) or parents born overseas (data not shown).
These data provide valuable insights into the evolution of sensitisation to both food and aeroallergens during early childhood in Melbourne, a setting with a high prevalence of allergic disease.
Author Contributions
N.C. was the lead investigator and responsible for study conception, design and funding acquisition. N.C. and S.D. developed the final scientific protocol and ethics application, and all other authors provided critical evaluation and revision. K.G. co‐ordinated, and N.C., D.C., P.V. and N.L.M. were involved in implementation. E.K.F. and N.L.M. developed, and N.C., S.D., L.F.P. and M.S. contributed to the analysis plan. E.K.F. led, N.L.M. supervised and L.F.P. contributed to data cleaning and preparation. N.L.M. drafted the manuscript and co‐ordinated manuscript preparation and revision. All authors provided critical evaluation and revision of the manuscript.
Conflicts of Interest
The authors declare no conflicts of interest.
Acknowledgements
The authors thank the MIS BAIR participants and their families for their involvement in the trial. We also thank our teams involved in the set‐up, recruitment, immunisation, follow‐up, and 1/5‐year visits: Veronica Abruzzo, Karen Bellamy, Kirsty Bowes, Clare Brophy, Ash Burgess, Emma Burrell, Nakita Clements, Helen Czech, Sonia Elia, Jackie Free, Bridget Freyne, Marie Gentile‐Andrit, Simone Hamilton, Kirsten Mitchell, Clare Morison, Brooke O'Neill, Monica Owald, Julie Quinn, Faith Reilly, Hannah Turner, Kate Wall, Christel Zufferey; Trial co‐ordination: Christine Axelrad, Casey Goodall, Gill Ormond; Data management: Suzanna Vidmar, Nick McPhate; the members of the DSMB; and Katie Allen, Jennifer Koplin and Kirsten Perrett for their expertise in allergy. Open access publishing facilitated by The University of Melbourne, as part of the Wiley ‐ The University of Melbourne agreement via the Council of Australian University Librarians. Open access publishing facilitated by The University of Melbourne, as part of the Wiley ‐ The University of Melbourne agreement via the Council of Australian University Librarians.
Funding: This work was supported by the National Health and Medical Research Council (NHMRC) of Australia (GNT 1051228; 1099676), the University of Melbourne, RCH Foundation and the Murdoch Children's Research Institute. LFP is supported by the Swiss National Science Foundation Early Postdoc Mobility grant (P2GEP3_178155) and Ambizione grant (PZ00P3‐209050). NC is supported by a National Health and Medical Research Council (NHMRC) Investigator Grant (GNT 1197117).
Nicole L. Messina and Laure F. Pittet contributed equally to this study.
Contributor Information
Nicole L. Messina, Email: nicole.messina@mcri.edu.au.
Nigel Curtis, Email: nigel.curtis@rch.org.au.
Data Availability Statement
The data that support the findings of this study are available from the corresponding author upon reasonable request.
References
- 1. Messina N. L., Gardiner K., Donath S., et al., “Study Protocol for the Melbourne Infant Study: BCG for Allergy and Infection Reduction (MIS BAIR), a Randomised Controlled Trial to Determine the Non‐Specific Effects of Neonatal BCG Vaccination in a Low‐Mortality Setting,” BMJ Open 9, no. 12 (2019): e032844, 10.1136/bmjopen-2019-032844. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 2. Pittet L. F., Messina N. L., Gardiner K., et al., “Prevention of Infant Eczema by Neonatal Bacillus Calmette‐Guerin Vaccination: The MIS BAIR Randomized Controlled Trial,” Allergy 77, no. 3 (2022): 956–965, 10.1111/all.15022. [DOI] [PubMed] [Google Scholar]
- 3. Messina N. L., Pittet L. F., Gardiner K., et al., “Neonatal Bacille Calmette‐Guerin Vaccination and Infections in the First Year of Life: The MIS BAIR Randomized Controlled Trial,” Journal of Infectious Diseases 224, no. 7 (2021): 1115–1127, 10.1093/infdis/jiab306. [DOI] [PubMed] [Google Scholar]
- 4. Messina N. L., Gardiner K., Pittet L. F., et al., “Neonatal BCG Vaccination for Prevention of Allergy in Infants: The MIS BAIR Randomised Controlled Trial,” Clinical and Experimental Allergy 54 (2024): 682–693, 10.1111/cea.14537. [DOI] [PubMed] [Google Scholar]
- 5. Pittet L. F., Forbes E. K., and Donath S., “Neonatal BCG Vaccination to Prevent Asthma: Results From the MIS BAIR Randomized Controlled Trial,” Pediatric Allergy and Immunology 36 (2025): e70110. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 6. Macreadie I., “Reflections From Melbourne, the World's Most Locked‐Down City, Through the COVID‐19 Pandemic and Beyond,” Microbiology Australia 43, no. 1 (2022): 3–4, 10.1071/MA22002. [DOI] [Google Scholar]
- 7. Schurer S., Atalay K., Glozier N., Vera‐Toscano E., and Wooden M., “Quantifying the Human Impact of Melbourne's 111‐Day Hard Lockdown Experiment on the Adult Population,” Nature Human Behaviour 7, no. 10 (2023): 1652–1666, 10.1038/s41562-023-01638-1. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 8. Meinich Petersen S., Zoffmann V., Kjaergaard J., Graff Stensballe L., and Greisen G., “Disappointment and Adherence Among Parents of Newborns Allocated to the Control Group: A Qualitative Study of a Randomized Clinical Trial,” Trials 15 (2014): 126, 10.1186/1745-6215-15-126. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 9. Peters R. L., Soriano V. X., Allen K. J., et al., “The Prevalence of IgE‐Mediated Food Allergy and Other Allergic Diseases in the First 10 Years: The Population‐Based, Longitudinal HealthNuts Study,” Journal of Allergy and Clinical Immunology: In Practice 12, no. 7 (2024): 1819–1830, 10.1016/j.jaip.2024.03.015. [DOI] [PubMed] [Google Scholar]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Data Availability Statement
The data that support the findings of this study are available from the corresponding author upon reasonable request.
