Skip to main content
IMA Fungus logoLink to IMA Fungus
. 2026 Jan 19;17:e167329. doi: 10.3897/imafungus.17.167329

Systematic study of Panaeolus (Agaricales, Galeropsidaceae) sensu lato and psilocybin-producing traits of species from China

Mao-Qiang He 1,2, Wen-Qiang Yang 2, Dorji Phurbu 3, Fei Liu 2, Jia-Xin Li 2,4, Bin Cao 2, Rui-Lin Zhao 2,4,
PMCID: PMC12835877  PMID: 41607716

Abstract

Panaeolus sensu lato is a group of hallucinogenic mushrooms commonly found on dung, in pasture areas, grasslands, and forests. Previous studies indicated that the Panaeolus s.l. clade (panaeo-clade) could be ranked as a family (Galeropsidaceae), pending further evidence. In this study, based on phylogenomic, multigene phylogenetic, molecular clock, and morphological analyses, the panaeo-clade is demonstrated to be a distinct family, separate from Bolbitiaceae. The taxonomic system of Galeropsidaceae is revised. The genera accepted in Galeropsidaceae are Panaeolus and Staktophyllus, whereas Crucispora and Panaeolopsis are synonymized under Panaeolus. Three subgenera are accepted in Panaeolus: subg. Bresadolomyces, subg. Panaeolina, and subg. Panaeolus. Subgenus Bresadolomyces is roughly equivalent to the traditional circumscription of subg. Copelandia but is extended to include species formerly placed in Crucispora. Subgenus Panaeolina comprises most species from China and Anellaria-like species. Subgenus Panaeolus mainly comprises the P. papilionaceus species complex and a western Asian clade represented by P. punjabensis. In this study, one new subgenus and eight new species are proposed. Species from China are documented with descriptions, photographs, and illustrations. Additionally, the psilocybin-producing traits of 14 species were tested using high-performance liquid chromatography–tandem mass spectrometry (HPLC–MS). Two species are confirmed to possess psilocybin-producing traits, namely the known species P. cinctulus and the new species P. subfoenisecii proposed in this study. The evolution of the coprophilous lifestyle and psilocybin-producing traits in Panaeolus is also discussed based on phylogenetic relationships and divergence times.

Key words: Agaricineae , Galeropsidaceae , hallucinogenic mushrooms, psychedelic fungi

Introduction

Panaeolus sensu lato is a group of small brown mushrooms commonly found on dung, in pastures, grasslands, and forests. They are well known as magic mushrooms because of the psilocybin-producing traits of some species, the most well known being P. cyanescens (Berk. & Broome) Sacc. (Stijve 1992). Species of Panaeolus s.l. are characterized by a combination of the following features: small basidiomes (pileus typically up to 5 cm in diameter, though reaching 10 cm in P. semiovatus (Sowerby) S. Lundell & Nannf.; Stamets 1996), a black spore print, lamellae adnate, black or grayish black, mottled or spotted due to uneven maturation of the basidiospores, dark basidiospores with thick walls and a germ pore, and cystidia including cheilocystidia, pleurocystidia, caulocystidia, and occasionally pileocystidia and pseudocystidia. Some morphological characteristics of Panaeolus s.l. exhibit strong plasticity depending on habitat or basidiome developmental stage. For example, Thai samples of P. antillarum (Fr.) Dennis form a mottled and streaked pileus that contrasts markedly with specimens from other regions (Desjardin and Perry 2017). This morphological plasticity has resulted in the recognition of many varieties. According to Index Fungorum, there are 199 names under Panaeolus, of which 41 are varietal names. Taking the type species P. papilionaceus (Bull.) Quél. as an example, there are five variety names, namely P. papilionaceus var. capitatocystis E. Ludw., P. papilionaceus var. microsporus Speg., P. papilionaceus var. papilionaceus (Bull.) Quél., P. papilionaceus var. parvisporus Ew. Gerhardt, and P. papilionaceus var. retirugis (Fr.) Gminder, as well as three widely used synonym names, viz. P. campanulatus (L.) Quél., P. retirugis (Fr.) Gillet, and P. sphinctrinus (Fr.) Quél. Despite nearly 200 published names, the number of accepted species is considerably lower, with 20 species recognized by Ola’h (1969), 29 by Singer (1986), 32 by Gerhardt (1996), and 15 by He et al. (2019). Strauss et al. (2023) accepted 77 legitimate Panaeolus s.l. species worldwide.

Traditionally, four subgenera within Panaeolus s.l. have been proposed based on phenotypic features: subg. Anellaria P. Karst., characterized by relatively large basidiomes and a white, viscid pileus (Karsten 1879); subg. Copelandia Bres., comprising species primarily from tropical and subtropical regions whose basidiomes turn blue when bruised (Bresadola 1913); subg. Panaeolina Maire, grouping species with roughened spores (Maire 1933); and subg. Panaeolus, encompassing the remaining species. Under the concept of Panaeolus sensu stricto, Panaeolus s.s. corresponds to subg. Panaeolus, whereas the other three subgenera are often treated as distinct genera (Singer 1986). The familial placement of Panaeolus s.l. based on phenotypic features has long been controversial. Characters used to infer relationships include spore print color, types of pileipellis, hallucinogenic properties, and spore color changes in concentrated sulfuric acid. Based on these characters, Panaeolus s.l. has been classified within Coprinaceae (Singer 1986), Psathyrellaceae (Kirk et al. 2008), or Strophariaceae (Hawksworth et al. 1995).

Molecular data have helped clarify the familial relationships of Panaeolus s.l. Phylogenetic analyses based on LSU or ITS sequences consistently recover a clade, here termed the panaeo-clade, corresponding to Panaeolus s.l., showing a closer affinity to Bolbitiaceae than to Coprinaceae, Psathyrellaceae, or Strophariaceae (Hopple and Vilgalys 1999; Moncalvo et al. 2002; Walther et al. 2005; Malysheva et al. 2019). However, a study using six genes revealed a different placement for the panaeo-clade, grouping it with Inocybeaceae, Crepidotaceae, and Tubariaceae, distant from Bolbitiaceae (Matheny et al. 2006). Because of the unclear phylogenetic relationships within Agaricales, the panaeo-clade has been classified variously as the genus Panaeolus (Malysheva et al. 2019), the tribe Panaeoleae (Matheny et al. 2006), or the subfamily Panaeoloideae (Tóth et al. 2013). Under nomenclatural rules, the appropriate name for the panaeo-clade should not be derived from Panaeolus. The type of Galeropsis Velen. (Galeropsidaceae), G. desertorum Velen. & Dvořák, has been shown to be a member of the panaeo-clade (Malysheva et al. 2019). Consequently, the name Galeropsidaceae, previously applied only to secotioid taxa (Singer 1962), would be the valid name for this clade if it is recognized at the family rank within Agaricales (Kalichman et al. 2020).

Several Panaeolus s.l. species, such as P. cyanescens and P. bisporus (Malençon & Bertault) Ew. Gerhardt, are well known for their confirmed psilocybin-producing capabilities (Stijve 1992; Senn-Irlet et al. 1999). However, the occurrence of psilocybin in other species remains contentious. For example, samples of P. antillarum from Poland contained no psilocybin or psilocin (Halama et al. 2014), whereas samples from Taiwan Island did contain psilocybin and psilocin (Wang and Tzean 2015). Another example is P. foenisecii (Pers.) J. Schröt., for which the psychoactive properties have long been debated (Guzmán et al. 1998). Chemical analysis provides definitive evidence, suggesting that misidentification may be a primary reason for conflicting reports on the psilocybin-producing traits of Panaeolus s.l. species. Current estimates suggest that 10 to 20 species are psychoactive (He et al. 2022; Strauss et al. 2023).

In this study, we present a systematic investigation of Panaeolus s.l. based on 104 specimens collected from China, with the oldest dating to 1958. Using these Chinese specimens together with available data from major public sequence repositories (GenBank), this study aims to (1) clarify the phylogenetic position of the panaeo-clade within Agaricineae; (2) resolve the phylogenetic relationships among species of Panaeolus s.l.; (3) revise the current taxonomic system of Panaeolus s.l. based on phylogenetic analyses, morphological characteristics, and divergence times; (4) confirm the psilocybin-producing properties of each species using high-performance liquid chromatography–tandem mass spectrometry (HPLC–MS); and (5) document the species diversity of Panaeolus s.l. in China.

Materials and methods

Morphological examination

All newly collected specimens were photographed in situ. Macro-morphological characteristics and biochemical color reactions were recorded from fresh specimens. The specimens were dried in a food dryer at 50 °C. Anatomical and cytological features, including basidiospores, basidia, cystidia, and pileipellis, were observed under an Olympus CX31 microscope. At least 20 measurements were taken. Data were recorded as follows: X = mean of length × width ± SD; Q = quotient of basidiospore length to width; and Qm = mean of Q values ± SD. The protocol for morphological study and chemical reactions followed Largent’s methodology (Largent 1986). Specimens are deposited in the Herbarium Mycologicum Academiae Sinicae (HMAS).

Phylogenomic and phylogenetic analyses

Information on reference genomes is presented in Table 1. Information on newly generated and reference sequences used in the multigene phylogenetic analyses is presented in Table 2. In the phylogenomic analysis, genome completeness was assessed using BUSCO v5.2.0 (Simão et al. 2015), employing default parameters and a set of 1,764 predefined orthologs from the basidiomycota_odb10 database. A data matrix was constructed from 1,764 single-copy, full-length BUSCO genes across the analyzed genomes. Each gene was aligned using MAFFT v7.490 (Katoh and Standley 2013), and ambiguous regions were trimmed using trimAl v1.4 (gappyout option). The resulting amino acid alignments, with more than 80% taxon occupancy per gene, were concatenated into a comprehensive data matrix. Phylogenetic analyses were conducted using IQ-TREE v2.0.3, with the best-fit amino acid substitution model selected automatically.

Table 1.

Genomic information of the samples used in the phylogenomic analysis.

Family Species Strain/Accession Reference
Agaricaceae Agaricus bisporus GCF_000300555.1 Morin et al. 2012
Agaricaceae Coprinus comatus GCA_003316025.1 Li et al. 2018
Agaricaceae Lepiota venenata GCA_004296355.1 Lüli et al. 2019
Agaricaceae Leucoagaricus sp. GCA_001563735.1 unpublished
Agaricaceae Macrolepiota dolichaula GCA_003315915.1 Li et al. 2018
Agaricaceae Podaxis carcinomalis GCA_018524395.1 Conlon et al. 2021
Amanitaceae Amanita muscaria Koide v1.0 Kohler et al. 2015
Cortinariaceae Cortinarius glaucopus GCA_015039465.1 Miyauchi et al. 2020
Crassisporiaceae Crassisporium funariophilum GCA_014925845.1 Steindorff et al. 2021
Crepidotaceae Crepidotus variabilis GCA_015657495.1 Ruiz-Dueñas et al. 2021
Galeropsidaceae Panaeolus cyanescens GCA_002938355.1 Awan et al. 2018
Galeropsidaceae Panaeolus papilionaceus GCA_015501605.1 Ruiz-Dueñas et al. 2021
Hydnangiaceae Laccaria amethystina LaAM-08-1 v2.0 Kohler et al. 2015
Hydnangiaceae Laccaria bicolor GCF_000143565.1 Martin et al. 2008
Hydnangiaceae Laccaria trichodermophora GCA_018417955.1 Ángeles-Argáiz et al. 2024
Hymenogastraceae Flammula alnicola GCA_015499995.1 Ruiz-Dueñas et al. 2021
Hymenogastraceae Galerina marginata GCA_000697645.1 Riley et al. 2014
Hymenogastraceae Gymnopilus dilepis GCA_002938385.1 Reynolds et al. 2018
Hymenogastraceae Gymnopilus junonius GCA_015501075.1 Ruiz-Dueñas et al. 2021
Hymenogastraceae Hebeloma cylindrosporum GCA_000827355.1 Kohler et al. 2015
Hymenogastraceae Psilocybe azurescens GCA_019721835.1 McKernan et al. 2021
Hymenogastraceae Psilocybe cf. subviscida GCA_013368295.1 Floudas et al. 2020
Hymenogastraceae Psilocybe cyanescens GCA_002938375.1 Yan et al. 2021
Hymenogastraceae Psilocybe galindoi GCA_019721455.1 McKernan et al. 2021
Hymenogastraceae Psilocybe serbica v1.0 Fricke et al. 2017
Hymenogastraceae Psilocybe tampanensis GCA_019904355.1 McKernan et al. 2021
Inocybaceae Inocybe terrigena GCA_003347685.1 Bahram et al. 2018
Nidulariaceae Crucibulum laeve GCA_004379715.1 Varga et al. 2019
Nidulariaceae Cyathus striatus GCA_015501535.1 Xie et al. 2024
Pluteaceae Pluteus cervinus NL-1719 v1.0 Varga et al. 2019
Psathyrellaceae Candolleomyces aberdarensis GCA_004126415.1 unpublished
Psathyrellaceae Coprinellus angulatus GCA_013368325.1 Floudas et al. 2020
Psathyrellaceae Coprinellus micaceus GCA_004369175.1 Varga et al. 2019
Psathyrellaceae Coprinopsis cinerea GCF_000182895.1 Stajich et al. 2010
Psathyrellaceae Coprinopsis marcescibilis GCA_004369085.1 Varga et al. 2019
Psathyrellaceae Coprinopsis sp. GCA_020736565.1 Mesny et al. 2021
Psathyrellaceae Coprinopsis strossmayeri GCA_900156845.1 Banks et al. 2017
Squamanitaceae Floccularia luteovirens GCA_009739215.1 Liu et al. 2021
Strophariaceae Agrocybe pediades GCA_013053245.1 Li et al. 2024
Strophariaceae Hypholoma fasciculare GCA_016801325.1 Al-Salihi et al. 2019
Strophariaceae Hypholoma sublateritium GCA_000827495.1 Kohler et al. 2015
Strophariaceae Pholiota adiposa GCA_009935795.1 He et al. 2025
Strophariaceae Pholiota conissans CIRM-BRFM 674 v1.0 Ruiz-Dueñas et al. 2021
Strophariaceae Pholiota microspora GCA_003314615.1 Li et al. 2018
Strophariaceae Pholiota molesta GCA_014925825.1 Steindorff et al. 2021
Strophariaceae Stropharia rugosoannulata GCA_003314255.1 Li et al. 2018
Tubariaceae Cyclocybe aegerita GCA_902728275.1 Chen et al. 2024
Tubariaceae Cyclocybe cylindracea GCA_013376435.1 Liang et al. 2020
Tubariaceae Tubaria furfuracea GCA_900069095.1 Dentinger et al. 2016

Table 2.

Sequence information for the samples used in the phylogenetic analyses.

Family name Species name Specimen number Region ITS LSU Tef1 rpb1 rpb2 SSU Reference
Agaricaceae Agaricus campestris AFTOL-ID 1492 DQ486682 DQ110871 DQ516068 DQ113914 Matheny et al. 2006
Agaricaceae Calvatia gigantea DSH 96-032 Germany, Mecklenburg AJ617492 AF518603 AF026622 Krüger and Gargas 2008
Agaricaceae Chlorophyllum agaricoides AFTOL-ID 440 Greece DQ200928 AY700187 DQ447889 AY657010 Matheny et al. 2006
Agaricaceae Clarkeinda trachodes xml2014104 China LT716022 KY418837 KY418989 Zhao et al. 2017
Agaricaceae Coniolepiota spongodes png012 Thailand, Chiang Mai Province HM488756 HM488774 HM488883 HM488796 Vellinga et al. 2011
Agaricaceae Coprinus comatus AFTOL-ID 626 AY854066 AY635772 AY857983 AY780934 AY665772 Matheny et al. 2006
Agaricaceae Eriocybe chionea ecv3616 (T) Thailand, Chiang Mai Province HM488753 HM488772 HM488801 Vellinga et al. 2011
Agaricaceae Heinemannomyces sp. ZRL185 Thailand KT951346 KT951527 KT951657 Zhao et al. 2016
Agaricaceae Hymenagaricus sp. AFTOL-ID 1383 DQ490633 DQ457680 DQ089016 Matheny et al. 2006
Agaricaceae Lepiota cristata ZRL20151133 China LT716026 KY418841 KY419048 KY418963 KY418992 KY418910 Zhao et al. 2017
Agaricaceae Leucocoprinus fragilissimus ZRL20151466 China LT716029 KY418844 KY419049 KY418965 KY418994 KY418913 Zhao et al. 2017
Agaricaceae Lycoperdon ericaeum ZRL20151498 China LT716030 KY418845 KY418966 KY418995 KY418914 Zhao et al. 2017
Agaricaceae Macrolepiota dolichaula xml2013058 China LT716021 KY418836 KY419044 KY418988 Zhao et al. 2017
Agaricaceae Micropsalliota globocystis ZRL2013465 China LT716024 KY418839 KY419046 KY418991 Zhao et al. 2017
Agaricaceae Verrucospora flavofusca AFTOL-ID 655 DQ241779 DQ470825 AY665783 Matheny et al. 2006
Amanitaceae Amanita brunnescens AFTOL-ID 673 AY789079 AY631902 AY881021 AY788847 AY780936 AY707096 Matheny et al. 2006
Amanitaceae Amanita muscaria HKAS61888 China, Heilongjiang Province MH508439 MH486651 MH508908 MH486100 Cui et al. 2018
Amanitaceae Catatrama costaricensis DAOM 211663 Costa Rica KT833804 KT833834 KT833819 Yang et al. 2018
Amanitaceae Limacella delicata ZT Myc 55818 Switzerland KT833807 KT833835 KT833822 Yang et al. 2018
Amanitaceae Limacellopsis guttata MB-100157 Germany KT833813 KT833841 KT833828 Yang et al. 2018
Bolbitiaceae Bolbitius subvolvatus WU28379 China JX968248 JX968365 JX968454 Toth et al. 2013
Bolbitiaceae Bolbitius vitellinus AFTOL-ID 730 USA, Washington DQ200920 AY691807 DQ408148 DQ435802 DQ385878 AY705955 Matheny et al. 2006
Bolbitiaceae Conobolbitina micheliana HMJAU65015 (T) China OR995677 OR994080 PP000869 Song and Bau 2024
Bolbitiaceae Conobolbitina pygmaeoaffinis WU16600 China JX968149 JX968382 Toth et al. 2013
Bolbitiaceae Conocybe lactea AFTOL-ID 1675 USA, Massachusetts DQ486693 DQ457660 DQ447893 DQ470834 DQ437683 Matheny et al. 2006
Bolbitiaceae Conocybe semiglobata WU8794 JX968188 JX968304 Toth et al. 2013
Bolbitiaceae Conocybe tenera SZMC-NL-1615 JX968180 JX968296 JX968404 Toth et al. 2013
Bolbitiaceae Conocybula coprophila HMJAU62008 China OR995662 OR995712 PP000855 Song and Bau 2024
Bolbitiaceae Conocybula longistipitata HMJAU64974 China OR995664 OR995714 PP000857 Song and Bau 2024
Bolbitiaceae Descolea antarctica NZ5182 AF325647 Peintner et al. 2001
Bolbitiaceae Descolea quercina HMJAU64959 China OQ780313 OQ758213 OQ758299 Song and Bau 2023
Bolbitiaceae Galerella nigeriensis CNF1/5859 JX968251 JX968368 JX968457 Toth et al. 2013
Bolbitiaceae Panaeolus desertorum SZMC-NL-1863 JX968154 JX968271 JX968387 Toth et al. 2013
Bolbitiaceae Pholiotina aporos SZMC-NL-1241 JX968260 JX968376 JX968462 Toth et al. 2013
Bolbitiaceae Pholiotina changbaishanensis HMJAU65101 China OR995689 OR994092 PP000881 Song and Bau 2024
Bolbitiaceae Pholiotina excrescenticystidiata HMJAU65021 China OR995695 OR994098 PP000887 Song and Bau 2024
Bolbitiaceae Pholiotina intermedia HMJAU62014 China OR995667 OR995717 PP000860 Song and Bau 2024
Bolbitiaceae Pholiotina serrata HMJAU62006 China OP538570 OQ758217 OQ758301 Song and Bau 2024
Cortinariaceae Aureonarius kroegeri F15952 (T) FJ157053 Harrower et al. 2011
Cortinariaceae Calonarius typicus H7068029 (T) USA, Florida NR173069 Liimatainen et al. 2022
Cortinariaceae Cortinarius violaceus Moser 74/208 (T) Sweden NR173726 Liimatainen et al. 2022
Cortinariaceae Cystinarius rubiginosus H7072000 (T) USA, California NR182475 Liimatainen et al. 2022
Cortinariaceae Hygronarius renidens Kytovuori 00-021 (T) Finland, Varsinais–Suomi NR175772 Liimatainen et al. 2022
Cortinariaceae Hygronarius renidens OS582 Norway KC842459 KC842529 Stensrud et al. 2014
Cortinariaceae Mystinarius lustrabilis PC0088377 (T) NR131792 Niskanen et al. 2006
Cortinariaceae Mystinarius lustrabilis TUB011835 AY669586 KJ403766 Garnica et al. 2005
Cortinariaceae Phlegmacium saginum T30 Norway KC842448 KC842518 KC171290 Stensrud et al. 2014
Cortinariaceae Thaxterogaster magellanicus EN266 MN855079 Nouhra et al. 2021
Cortinariaceae Volvanarius chlorosplendidus K235086 (T) Argentina, Bariloche NR169962 Liimatainen and Niskanen 2020
Crassisporiaceae Crassisporium funariophilum IB1949/0008 (T) Austria, Tyrol NR172227 NG070812 Matheny et al. 2015
Crassisporiaceae Romagnesiella clavus PAM06090110 (T) France NR171207 NG070809 Matheny et al. 2007
Crepidotaceae Crepidotus cf. applanatus PBM 717 USA, Washington DQ202273 AY380406 AY333303 AY333311 AY705951 Matheny et al. 2006
Crepidotaceae Crepidotus mollis TUB 011566 DQ071698 KF211308 Garnica et al. 2007
Crepidotaceae Neopaxillus dominicanus MCVE 26928 Dominican Republic JN033216 JN033217 Vizzini et al. 2012
Crepidotaceae Neopaxillus plumbeus F 1068564 (T) NR132860 NG060271 Vizzini et al. 2012
Crepidotaceae Pellidiscus pallidus C58178 Ecuador AY571054 AY571017 Bodensteiner et al. 2004
Crepidotaceae Simocybe serrulata AFTOL-ID 970 DQ494696 AY745706 DQ447940 DQ484053 DQ465343 Matheny et al. 2006
Galeropsidaceae Panaeolopsis nirimbii G1701 Australia MK278427 Varga et al. 2019
Galeropsidaceae Panaeolopsis sp. Mushroom Observer 161213 Canada, Saskatchewan MW183929 unpublished
Galeropsidaceae Panaeolus acuminatus CBS:270.47 MH856251 MH867783 Vu et al. 2019
Galeropsidaceae Panaeolus acuminatus CBS:269.47 MH856250 MH867782 Vu et al. 2019
Galeropsidaceae Panaeolus acuminatus GLM 46071 DQ071695 DQ067964 Garnica et al. 2007
Galeropsidaceae Panaeolus acuminatus TFB8626 Argentina, Puerto Chucao KY559329 MF978334 unpublished
Galeropsidaceae Panaeolus alcis Mushroom Observer 88085 Sweden KM982723 unpublished
Galeropsidaceae Panaeolus alcis SAT-14-239-20 USA MW597122 unpublished
Galeropsidaceae Panaeolus antillarum ZRL20191951 PP475257 PP472834 PP554377 PP556837 PP852766 PP472859 this study
Galeropsidaceae Panaeolus antillarum HMAS37291 China, Bejing PP475256 PP472831 PP472835 this study
Galeropsidaceae Panaeolus antillarum HMAS69911 China, Hebei Province PP475260 PP472753 PP554379 this study
Galeropsidaceae Panaeolus antillarum HMAS52750 China, Xizang Autonomous Region PP475258 PP472833 PP554378 PP852765 this study
Galeropsidaceae Panaeolus antillarum HMAS52751 China, Xizang Autonomous Region PP475259 PP472832 this study
Galeropsidaceae Panaeolus axfordii MFLU 19-2367 China, Yunnan Province NR_169700 Hu et al. 2020
Galeropsidaceae Panaeolus bisporus KaiR95 Benin MT110229 Piepenbring et al. 2020
Galeropsidaceae Panaeolus bisporus MushroomObserver 188954 USA, Ohio MG966283 unpublished
Galeropsidaceae Staktophyllus cf. guttulatus G0217 Hungary MK278432 Varga et al. 2019
Galeropsidaceae Panaeolus cinctulus ZRL20191912 China, Inner Mongolia Autonomous Region PP472799 PP556781 PP832222 PP852767 PP472838 this study
Galeropsidaceae Panaeolus cinctulus HMAS63178 China, Ningxia Hui Autonomous Region PP475250 PP472800 PP556783 this study
Galeropsidaceae Panaeolus cinctulus CBS:331.34 MH855554 MH867059 Vu et al. 2019
Galeropsidaceae Panaeolus cinctulus NX180911-04 China, Ningxia Hui Autonomous Region MN960188 unpublished
Galeropsidaceae Panaeolus cinctulus ZRL20200005 China, Beijing PP472801 PP556782 PP832223 PP852768 PP472839 this study
Galeropsidaceae Panaeolus cyanescens HMAS57723 China,Guizhou Province PP475202 PP472752 PP556776 this study
Galeropsidaceae Panaeolus cyanescens NBRC-30222 Japan AB158633 Maruyama et al. 2006
Galeropsidaceae Panaeolus cyanescens MW-2010 HM035085 HM035085 unpublished
Galeropsidaceae Panaeolus cyanescens var. bisporus n. 6576 AQUI Italy EU834287 EU834287 unpublished
Galeropsidaceae Panaeolus desertorum AH 9993 (paratype) Spain MK397543 MK397561 Malysheva et al. 2019
Galeropsidaceae Panaeolus desertorum SZMC-NL-1863 JX968154 JX968271 JX968387 Toth et al. 2013
Galeropsidaceae Panaeolus detriticola PERTH 08944954 (T) Australia NR_199086 unpublished
Galeropsidaceae Panaeolus fimicola 4080 Italy JF908518 Osmundson et al. 2013
Galeropsidaceae Panaeolus fimicola CBS:251.37 MH855904 MH867411 Vu et al. 2019
Galeropsidaceae Panaeolus fimicola iNat72986889 USA, Lane County OQ383438 unpublished
Galeropsidaceae Panaeolus fimicola 4350 Italy JF908519 Osmundson et al. 2013
Galeropsidaceae Panaeolus foenisecii ZRL20210662 PP475255 PP472795 PP556786 PP832226 PP472861 this study
Galeropsidaceae Panaeolus foenisecii FO 46609 DQ071696 DQ067963 Garnica et al. 2007
Galeropsidaceae Panaeolus foenisecii CBS:142.40 MH856067 MH867557 Vu et al. 2019
Galeropsidaceae Panaeolus foenisecii K(M):250281 United Kingdom, Buckinghamshire MZ159698 unpublished
Galeropsidaceae Panaeolus foenisecii J152 AF041537 DQ851578 Hopple and Vilgalys 1999
Galeropsidaceae Panaeolus foenisecii ZRL20210661 China, Xizang Autonomous Region PP475254 this study
Galeropsidaceae Panaeolus foenisecii ZRL20220802 China, Xizang Autonomous Region PP475253 PP472796 PP556787 PP832227 PP852770 PP472862 this study
Galeropsidaceae Panaeolus fraxinophilus MushroomObserver 455364 USA, Kentucky OL629088 unpublished
Galeropsidaceae Panaeolus grandis ZRL20220352 PP475283 PP472808 PP556823 PP850999 PP852786 PP472878 this study
Galeropsidaceae Panaeolus grandis ZRL20220208 (T) China, Xizang Autonomous Region PP475284 PP472809 PP556824 PP850998 PP852787 PP472879 this study
Galeropsidaceae Staktophyllus guttulatus 137 Iran MH592651 unpublished
Galeropsidaceae Staktophyllus guttulatus var. guttulatus STA5 Iraq LC458688 unpublished
Galeropsidaceae Panaeolus limoniformisporus ZRL20220678 China, Xizang Autonomous Region PP475289 PP472813 PP556818 PP850987 PP852774 PP472885 this study
Galeropsidaceae Panaeolus limoniformisporus ZRL20180975 China, Gansu Province PP475285 PP472816 PP556820 PP850989 PP852773 PP472850 this study
Galeropsidaceae Panaeolus limoniformisporus ZRL20181122 (T) China, Gansu Province PP475290 PP472814 PP556822 PP850988 PP852776 PP472849 this study
Galeropsidaceae Panaeolus limoniformisporus ZRL20200165 China, Sichuan Province PP475286 PP472815 PP556817 PP850990 PP472841 this study
Galeropsidaceae Panaeolus limoniformisporus ZRL2015390 China, Sichuan Province PP475287 PP472818 PP556821 PP850991 PP852777 PP472884 this study
Galeropsidaceae Panaeolus limoniformisporus ZRL20152331 China, Xizang Autonomous Region PP475288 PP472817 PP556819 PP850986 PP852775 PP472898 this study
Galeropsidaceae Panaeolus limoniformisporus ZRL20220678 China, Xizang Autonomous Region PP475289 PP472813 PP556818 PP850987 PP852774 PP472885 this study
Galeropsidaceae Panaeolus medogensis ZRL20210733 (T) China, Xizang Autonomous Region PP475291 PP472812 PP850985 PP472840 this study
Galeropsidaceae Panaeolus mexicanus ANGE1557 Dominican Republic MZ856314 Voto and Angelina 2021
Galeropsidaceae Panaeolus nigrescens ZRL20181924 China, Gansu Province PP475293 PP472754 PP556836 PP850992 PP852779 PP472846 this study
Galeropsidaceae Panaeolus nigrescens ZRL20180732 (T) China, Gansu Province PP475292 PP472757 PP852778 PP472848 this study
Galeropsidaceae Panaeolus nigrescens ZRL20161807 China, Gansu Province PP475295 PP472756 PP556833 PP852780 PP472847 this study
Galeropsidaceae Panaeolus nigrescens ZRL20161828 China, Gansu Province PP475296 PP472755 PP556835 PP852781 PP472886 this study
Galeropsidaceae Panaeolus nigrescens ZRL20161875 China, Gansu Province PP475294 PP472758 PP556834 PP472887 this study
Galeropsidaceae Panaeolus nigrescens ZRL20181924 China, Gansu Province PP475293 PP472754 PP556836 PP850992 PP852779 PP472846 this study
Galeropsidaceae Panaeolus pallidus ZRL20180988 (T) China, Gansu Province PP475282 PP472811 PP556826 PP850984 PP852772 PP472851 this study
Galeropsidaceae Panaeolus pallidus ZRL20190137 China, Beijing PP475281 PP472810 PP556825 PP852771 PP472877 this study
Galeropsidaceae Panaeolus paludosus B2082 Australia MK278434 Varga et al. 2019
Galeropsidaceae Panaeolus pantropicalis JBSD 130972 (T) Dominican Republic PP590036 Voto and Angelini 2024
Galeropsidaceae Panaeolus pantropicalis MHHNU 31396 China OP862800 unpublished
Galeropsidaceae Panaeolus pantropicalis DNA1940 USA, Florida KF830093.1 KF830082.1 KF830065.1 KF830073.1 unpublished
Galeropsidaceae Panaeolus papilionaceus ZRL20210652 China, Xizang Autonomous Region PP475247 PP472773 PP556811 PP850967 PP852754 PP472893 this study
Galeropsidaceae Panaeolus papilionaceus AFTOL-ID 1499 USA, Washington DQ182503 DQ470817 DQ459375 Matheny et al. 2006
Galeropsidaceae Panaeolus papilionaceus ZRL20220203 China, Xizang Autonomous Region PP475238 PP472775 PP472889 this study
Galeropsidaceae Panaeolus papilionaceus ZRL20220153 China, Xizang Autonomous Region PP475239 PP472787 PP556807 PP850972 PP472870 this study
Galeropsidaceae Panaeolus parvisporus ZRL20170602 China, Inner Mongolia Autonomous Region PP475214 PP472786 PP556793 PP850963 PP852758 PP472864 this study
Galeropsidaceae Panaeolus parvisporus CBS 276.39 MH856012 Vu et al. 2019
Galeropsidaceae Panaeolus parvisporus 7070 Italy JF908521 Osmundson et al. 2013
Galeropsidaceae Panaeolus parvisporus ZRL20170602 China, Inner Mongolia Autonomous Region PP475214 PP472786 PP556793 PP850963 PP852758 PP472864 this study
Galeropsidaceae Panaeolus parvisporus ZRL20170603 China, Inner Mongolia Autonomous Region PP475216 PP472772 PP556794 PP850964 PP852760 PP472865 this study
Galeropsidaceae Panaeolus parvisporus ZRL20170604 China, Inner Mongolia Autonomous Region PP475212 PP472771 PP852759 PP472866 this study
Galeropsidaceae Panaeolus parvisporus ZRL20170654 China, Inner Mongolia Autonomous Region PP475215 PP472784 PP556792 PP472867 this study
Galeropsidaceae Panaeolus parvisporus HMAS69762 China, Ningxia Hui Autonomous Region PP475213 PP472783 PP556795 PP850965 this study
Galeropsidaceae Panaeolus plantaginiformis LE 2862 (lectotype) Russia MK397577 MK397599 Malysheva et al. 2019
Galeropsidaceae Panaeolus plantaginiformis LE 2863 (holotype) Uzbekistan MK397580 MK397602 Malysheva et al. 2019
Galeropsidaceae Panaeolus punjabensis LAH36794 Pakistan ON116492 Asif et al. 2023
Galeropsidaceae Panaeolus punjabensis LAH36792 Pakistan ON116491 Asif et al. 2023
Galeropsidaceae Panaeolus punjabensis LAH36793 Pakistan MZ823627 ON116490 Asif et al. 2023
Galeropsidaceae Panaeolus punjabensis LAH37417 Pakistan OP681142 Asif et al. 2023
Galeropsidaceae Panaeolus punjabensis INNASA1 Iraq MK500858 unpublished
Galeropsidaceae Panaeolus ranwuensis ZRL20210707 (T) China, Xizang Autonomous Region PP475220 PP472785 PP556788 PP850966 PP852735 PP472894 this study
Galeropsidaceae Panaeolus ranwuensis HMAS69910 China, Inner Mongolia Autonomous Region PP475221 PP472781 PP556789 PP852734 this study
Galeropsidaceae Panaeolus rhombisperma CWN 11502 Taiwan Island MZ782082 MZ781504 Chou et al. 2023
Galeropsidaceae Panaeolus semiovatus ZRL20181933 PP475266 PP472822 PP554381 PP556842 PP852763 PP472857 this study
Galeropsidaceae Panaeolus semiovatus ZRL20201190 China, Sichuan Province PP475272 PP472829 PP554388 PP556843 PP852764 PP472856 this study
Galeropsidaceae Panaeolus semiovatus ZRL20201261 China, Sichuan Province PP475261 PP472821 PP554380 PP472855 this study
Galeropsidaceae Panaeolus semiovatus ZRL20201278 China, Sichuan Province PP475264 PP472826 PP554382 PP556844 PP472895 this study
Galeropsidaceae Panaeolus semiovatus ZRL20210938 China, Xizang Autonomous Region PP475273 PP472823 PP554385 PP556841 PP852761 PP472860 this study
Galeropsidaceae Panaeolus semiovatus ZRL20210939 China, Xizang Autonomous Region PP475274 PP472820 PP554386 PP556845 PP472888 this study
Galeropsidaceae Panaeolus semiovatus ZRL20220286 China, Xizang Autonomous Region PP475265 PP472824 PP554387 PP556846 PP472900 this study
Galeropsidaceae Panaeolus sp. HMAS72941 China, Guangxi Province PP475209 PP472751 PP556791 this study
Galeropsidaceae Panaeolus sp. HMAS69946 China, Ningxia Hui Autonomous Region PP475207 PP472792 PP556778 this study
Galeropsidaceae Panaeolus sp. PBM4141 MG773818 unpublished
Galeropsidaceae Panaeolus sp. HMAS69980 China, Ningxia Hui Autonomous Region PP475204 PP472791 PP556777 PP832221 PP852733 this study
Galeropsidaceae Panaeolus sp. X540 Czech Republic MW352021 MW352021 Gotvaldová et al. 2022
Galeropsidaceae Panaeolus sp. iNAT:99905220 USA, New York OL584501 unpublished
Galeropsidaceae Panaeolus sp. 204 USA, Arizona MK627501 Owen et al. 2019
Galeropsidaceae Panaeolus sp. NY04449017 Colombia PP590035 Voto and Angelini 2024
Galeropsidaceae Panaeolus sp. CZ519-3 China FJ755227 FJ755227 unpublished
Galeropsidaceae Panaeolus sp. HMAS57752 China, Guizhou Province PP475210 PP556790 this study
Galeropsidaceae Panaeolus sp. HMAS72941 China, Guangxi Province PP475209 PP472751 PP556791 this study
Galeropsidaceae Panaeolus sp. N.L. Bougher NLB 1553 Australia, Perth MT571659 unpublished
Galeropsidaceae Panaeolus sp. MHHNU31392 China, Hunan Province MK439503 unpublished
Galeropsidaceae Panaeolus sp. RA400 Iraq MH632116 unpublished
Galeropsidaceae Panaeolus sp. HMAS63187 China, Ningxia Hui Autonomous Region PP475203 PP556779 this study
Galeropsidaceae Panaeolus sp. HMAS69980 China, Ningxia Hui Autonomous Region PP475204 PP472791 PP556777 PP832221 PP852733 this study
Galeropsidaceae Panaeolus sp. HMAS69846 China, Ningxia Hui Autonomous Region PP475206 PP472794 this study
Galeropsidaceae Panaeolus sp. HMAS69959 China, Ningxia Hui Autonomous Region PP475205 PP472793 PP556780 PP852732 this study
Galeropsidaceae Panaeolus subfoenisecii ZRL20220801 China, Xizang Autonomous Region PP475251 PP472797 PP556784 PP832224 PP852769 PP472863 this study
Galeropsidaceae Panaeolus subfoenisecii ZRL20220850 (T) China, Xizang Autonomous Region PP475252 PP472798 PP556785 PP832225 PP472854 this study
Galeropsidaceae Panaeolus sylvaticus ANGE1393 Dominican Republic OQ311002 Angelini and Voto 2019
Galeropsidaceae Panaeolus tropicalis taxon:1104351 China JF961377 unpublished
Galeropsidaceae Panaeolus uliginosus DAOM 176594 Canada AY129363 AY129384 Nugent and Saville 2004
Galeropsidaceae Panaeolus variabilicolor ZRL20220735 China, Xizang Autonomous Region PP475279 PP472805 PP556829 PP850993 PP852784 PP472892 this study
Galeropsidaceae Panaeolus variabilicolor ZRL20210525 China, Xizang Autonomous Region PP475275 PP472804 PP556827 PP850995 PP472897 this study
Galeropsidaceae Panaeolus variabilicolor ZRL20220144 China, Xizang Autonomous Region PP475276 PP472803 PP556830 PP850996 PP852783 PP472880 this study
Galeropsidaceae Panaeolus variabilicolor ZRL20220096 (T) China, Xizang Autonomous Region PP475280 PP472802 PP556831 PP850997 PP852782 PP472881 this study
Galeropsidaceae Panaeolus variabilicolor ZRL20220075 China, Xizang Autonomous Region PP475278 PP472807 PP556828 PP850994 PP852785 PP472882 this study
Galeropsidaceae Panaeolus variabilicolor ZRL20220205 China, Xizang Autonomous Region PP475277 PP472806 PP556832 PP472883 this study
Galeropsidaceae Panaeolus xiaolanii ZRL20220560 China, Xizang Autonomous Region PP475225 PP472760 PP556799 PP850976 PP852741 PP472891 this study
Galeropsidaceae Panaeolus xiaolanii ZRL20220031 (T) China, Xizang Autonomous Region PP475242 PP472769 PP556803 PP850978 PP852742 PP472902 this study
Galeropsidaceae Panaeolus xiaolanii ZRL20220039 China, Xizang Autonomous Region PP475232 PP472763 PP556800 PP850979 PP852736 PP472852 this study
Galeropsidaceae Panaeolus xiaolanii ZRL20220044 China, Xizang Autonomous Region PP475244 PP472759 PP556801 PP850980 PP852744 PP472873 this study
Galeropsidaceae Panaeolus nirimbii PERTH7680368 Australia MK278427 Varga et al. 2019
Galeropsidaceae Staktophyllus guttulatus 137 Iran MH592651 unpublished
Galeropsidaceae Staktophyllus guttulatus var. guttulatus STA5 Iraq LC458688 unpublished
Galeropsidaceae Staktophyllus guttulatus var. guttulatus AMB n. 18101 KU725993 unpublished
Galeropsidaceae Staktophyllus guttulatus var. merrisiani AMB n. 18102 KU725994 unpublished
Galeropsidaceae Staktophyllus sp. PBM4141 USA, Tennessee MG773818 MT237467 unpublished
Hydnangiaceae Hydnangium carneum Trappe31123 Australia, Capital KU685741 KU685892 KU686144 KU686038 Wilson et al. 2017
Hydnangiaceae Laccaria torosa SFC20150902-17 (T) Korea MG519561 MG519598 MG551664 MG551631 Cho et al. 2018
Hydnangiaceae Podohydnangium australe TM1026 Australia KY073249 Sheedy et al. 2016
Hymenogastraceae Anamika indica IB19971307 (T) India AF407163 AF407164 Thomas et al. 2002
Hymenogastraceae Galerina vittiformis CBS:161.46 France MH867673 Vu et al. 2019
Hymenogastraceae Hebeloma cf. cavipes ZRL20151612 China LT716034 KY418849 KY419053 KY418997 Zhao et al. 2017
Hymenogastraceae Hebeloma fastibile IB19940036 AF325643 AY033139 AF388877 Peintner et al. 2001
Hymenogastraceae Naucoria escharioides PBM 1719 USA, Washington AJ585430 AY380405 AY351840 AY337411 Matheny 2005
Hymenogastraceae Phaeocollybia lugubris 14619 Italy JF908574 Osmundson et al. 2013
Hymenogastraceae Psathyloma leucocarpum PDD 105593 (T) NG059606 Soop et al. 2016
Hymenogastraceae Psathyloma leucocarpum PBM3116 New Zealand, North Island HQ840659 HQ840660 HQ840662 HQ840661 Matheny et al. 2015
Hymenogastraceae Psilocybe semilanceata CBS 101868 United Kingdom MH862763 Vu et al. 2019
Hymenogastraceae Psathyloma catervatim PBM3420 HQ840663 HQ840664 HQ840666 HQ840665 Matheny et al. 2015
Inocybaceae Auritella aureoplumosa PBM 2212 Western Australia AY635765 AY635781 Matheny and Bougher 2006
Inocybaceae Auritella dolichocystis Trappe 24838 (T) Australia, New South Wales NG075155 Matheny and Bougher 2006
Inocybaceae Inocybe jarrahae PBM 2207 Western Australia AY380381 AY351806 AY337382 Matheny 2005
Inocybaceae Inocybe relicina JV 10258 Finland AY038324 AF389546 AY333778 Matheny et al. 2002
Inocybaceae Inosperma calamistratum PBM1105 USA, Washington JQ801386 JQ815409 MK426203 MK415438 JQ846466 MK429958 Kropp et al. 2013
Inocybaceae Mallocybe terrigena JV16431 Sweden AM882864 AY380401 AY333301 AY333309 Ryberg et al. 2008
Inocybaceae Nothocybe distincta ZT9250 India KX171343 EU604546 MK426212 MK415444 EU600904 MK429965 Matheny et al. 2009
Inocybaceae Pseudosperma sororium PBM3901 USA, North Carolina JQ408772 MH220278 MK426218 MK415447 MH249810 MK429971 Matheny et al. 2019
Inocybaceae Tubariomyces inexpectatus AH20390 (T) Spain GU907095 EU569855 GU907088 MK429973 Alvarado et al. 2010
Mythicomycetaceae Mythicomyces corneipes AFTOL-ID 972 DQ404393 AY745707 DQ029197 DQ447929 DQ408110 DQ092917 Matheny et al. 2006
Mythicomycetaceae Stagnicola perplexa AH 25260 (T) Spain MK351609 MK353793 MK359091 Vizzini et al. 2019
Nidulariaceae Crucibulum parvulum FLAS-F-66522 USA, Missouri MT444036 MW600344 MW763092 MW646476 Kraisitudomsook et al. 2021
Nidulariaceae Cyathus stercoreus FLAS-F-66543 USA, California MT444060 MW766997 MW763088 MW646480 Kraisitudomsook et al. 2021
Nidulariaceae Mycocalia denudata CBS-494.85 Canada MT444107 MW600347 MW763084 MW646481 Kraisitudomsook et al. 2021
Nidulariaceae Nidula emodensis MES-3354 Chile MT444079 MW600348 MW763093 Kraisitudomsook et al. 2021
Nidulariaceae Nidularia pulvinata FLAS-F-66545 USA, Ohio MT444097 MW600354 MW763090 MW646486 Kraisitudomsook et al. 2021
Pluteaceae Pluteus romellii AFTOL-ID 625 AY854065 AY634279 AY883433 AY862187 AY786063 AY657014 Matheny et al. 2006
Psathyrellaceae Coprinellus curtus SZMC-NL-2339 FM878016 FM876273 FM897246 Nagy et al. 2010
Psathyrellaceae Coprinopsis atramentaria PBM992 USA, Washington DQ486694 DQ457661 DQ115781 Matheny et al. 2006
Psathyrellaceae Cystoagaricus strobilomyces 30-V-1997 Japan AY176347 AY176348 Vellinga 2004
Psathyrellaceae Lacrymaria lacrymabunda AFTOL ID-478 DQ490639 AY700198 DQ472733 AY654885 Matheny et al. 2006
Psathyrellaceae Parasola conopilus ZRL20151990 China LT716064 KY418880 KY419025 KY418946 Zhao et al. 2017
Psathyrellaceae Psathyrella candolleana ZRL20151400 China LT716063 KY418879 KY419075 KY418978 KY419024 KY418945 Zhao et al. 2017
Strophariaceae Agrocybe praecox AFTOL ID-728 AY818348 AY646101 DQ516069 DQ385876 AY705956 Yang et al. 2005
Strophariaceae Bogbodia uda G0790 USA MK278210 Varga et al. 2019
Strophariaceae Deconica sp. PBM3781 Australia KF830081 KC669380 KF830064 KF830076 Ramírez-Cruz et al. 2013
Strophariaceae Hypholoma sublateritium AFTOL-ID 597 AY818349 AY635774 AY787215 Matheny et al. 2006
Strophariaceae Kuehneromyces rostratus AFTOL-ID 1676 DQ490638 DQ457684 GU187712 DQ447918 DQ472730 DQ457624 Matheny et al. 2006
Strophariaceae Leratiomyces tesquorum SAV F-4052 (T) USA MH043618 MH036177 Crous et al. 2018
Strophariaceae Melanotus hartii CBS:273.81 (T) Canada, Ontario MH861342 MH873101 Vu et al. 2019
Strophariaceae Pholiota squarrosa HMJAU37515 China MN209777 MN251160 MN329733 Tian and Matheny 2021
Strophariaceae Protostropharia dorsipora Mushroom Observer 488159 OP297820 unpublished
Strophariaceae Pyrrhulomyces astragalinus PBM4330 USA, North Carolina MT187979 MT228845 Tian and Matheny 2021
Strophariaceae Stropharia ambigua AFTOL-ID 726 AY818350 AY646102 GU187756 DQ447941 DQ484054 DQ092924 Matheny et al. 2006
Tubariaceae Flammulaster sp. PBM3449 Australia, Tasmania HQ827176 HQ827177 HQ827178 Matheny et al. 2015
Tubariaceae Hemistropharia albocrenulata G0088 USA MK278139 Varga et al. 2019
Tubariaceae Pachylepyrium fulvidula MICH 11636 (T) Argentina, Tucuman NR170724 NG073595 unpublished
Tubariaceae Pachylepyrium fulvidula T1495 Argentina, Tucuman KF830091 KF830080 KF830063 KF830072 unpublished
Tubariaceae Phaeomarasmius proximans AFTOL-ID 979 DQ404381 DQ028592 AY333314 AY752970 Matheny et al. 2006
Tubariaceae Tubaria confragosa AFTOL-ID 498 USA, Washington DQ267126 AY700190 DQ447944 DQ408113 AY665776 Matheny et al. 2007

For the multigene phylogenetic analyses, sequences were first checked in BioEdit v7.0.4 (Hall 2007). Alignments were generated using MUSCLE (Edgar 2004) for each region separately and then adjusted manually to remove ambiguous regions. The multigene matrix of Agaricineae included 123 ITS (685 bp), 116 LSU (931 bp), 52 SSU (1,046 bp), 60 tef1 (385 bp), 43 rpb1 (1,205 bp), and 66 rpb2 (705 bp) sequences. ModelFinder v2.2.0 (Kalyaanamoorthy et al. 2017) was used to select the best-fit partition model (edge-unlinked) based on the Akaike information criterion. In the Agaricineae multigene matrix, the best-fit models for each gene were SYM+I+G4 (rpb1), GTR+F+I+G4 (tef1), GTR+F+I+G4 (rpb2), GTR+F+I+G4 (ITS), and GTR+F+I+G4 (LSU and SSU). Bayesian inference (BI) analysis was performed in MrBayes v3.1.2. Ten million generations were run with six Markov chains and sampled every 100 generations, resulting in 100,000 trees. Burn-in was determined using Tracer v1.6, with effective sample size values greater than 200 (http://tree.bio.ed.ac.uk/software/tracer). The remaining trees were used to calculate Bayesian posterior probabilities (PP). Maximum likelihood (ML) analysis and bootstrap value estimation were performed in raxmlGUI v1.5b1 using the GTRGAMMA model with 1,000 replicates (Silvestro and Michalak 2012). The phylogenetic tree is presented in Fig. 2.

Figure 2.

Figure 2.

Maximum likelihood (ML) tree of Agaricineae based on six genes. Bootstrap values and Bayesian posterior probabilities greater than 50%/0.9 (BS/PP) are indicated at the nodes. Bold branches indicate PP > 0.95. “T” refers to sequences from type specimens.

Molecular clock analyses

Divergence time estimates based on the phylogenomic tree were obtained using penalized likelihood analyses with a truncated Newton optimization algorithm implemented in r8s v1.81 (Sanderson 2003). A fossil calibration point for Nidulariaceae was applied, with a minimum age constraint of 45 Myr and a maximum age constraint of 90 Myr (Varga et al. 2019). In the six-gene-based maximum clade credibility (MCC) analyses of Panaeolus s.l., 38 described species were included. The multigene matrix comprised 127 samples, including 118 ITS (476 bp), 85 LSU (889 bp), 51 SSU (1,032 bp), 56 tef1 (376 bp), 64 rpb1 (1,322 bp), and 65 rpb2 (682 bp) sequences. An XML file was generated using BEAUti 2 (Bouckaert et al. 2014). Site models for each gene were selected using the BEAST Model Test in BEAUti 2. A Yule model was selected as the prior, assuming a constant speciation rate per lineage. A relaxed log-normal clock model was used, specifying a gamma distribution for the ucld.mean parameter with a shape of 1.0, a scale of 0.001, and an offset of 0 (Zhao et al. 2016). A second calibration category was applied, and a normal distribution prior (SD = 1) with a mean age of 87 Myr, inferred from the phylogenomic dating analyses, was assigned to the root height. An independent Markov chain Monte Carlo analysis of 150 million generations was run in BEAST v2.0 (Bouckaert et al. 2014), with log states recorded every 1,000 generations. The ultrametric MCC tree was summarized using TreeAnnotator v2.4.7, discarding 20% of states as burn-in and annotating clades with posterior probabilities ≥ 0.8. SH-aLRT and UFBoot values were estimated using PhyloSuite (Zhang et al. 2020). The MCC tree is presented in Fig. 3.

Figure 3.

Figure 3.

Maximum clade credibility (MCC) tree of Galeropsidaceae based on six-gene sequences. Values noted on the branches represent SH-aLRT/UFBoot/PP/divergence time. Pink branch bars indicate clades that are fully supported by Bayesian posterior probability. “T” refers to sequences from type specimens.

Detecting psilocybin by HPLC–MS

A total of 0.02 g of dried mushroom specimen was used for detection. One milliliter of methanol was added, vortexed to mix, and the mixture was soaked overnight. Ultrasonic extraction was performed for 30 minutes at 25 °C. The mixture was centrifuged at 10,000 rpm for 10 minutes at 4 °C, and the supernatant was collected. An additional 0.5 mL of methanol was added to the residue and vortexed to mix. Ultrasonic extraction was performed again for 15 minutes. The extract was centrifuged at 10,000 rpm for 10 minutes at 4 °C, and the supernatants were combined. After thorough shaking, the combined extract was filtered through a 0.22 μm membrane. A 600 μL aliquot was transferred into liquid-phase vials for analysis. The presence of neurotoxins (psilocybin and baeocystin; purity > 95%, Cayman Chemical, USA) was evaluated by HPLC–MS, which was carried out using a Waters ACQUITY I-Class HPLC system coupled with a Waters Xevo-G2-XS TOF MS system (Waters, USA) under the conditions shown in Table 3. The mass range was set to 50–1,200 Da. The flow rate was maintained at 0.4 mL/min. The mobile phase solvents were water (A) and acetonitrile (B), and gradient elution was performed as follows: 0.0–0.2 min, 5% B; 0.2–5.2 min, 5–10% B; 5.2–12.5 min, 10–100% B; 12.5–13.5 min, 100% B; and 13.5–15.0 min, 100–5% B. The HPLC–MS chromatograms of the detected species are provided in the Suppl. materials 19.

Table 3.

Instrument parameters for the UPLC-MS/MS analyses.

Compound Q1 mass (Da) Q2 mass (Da) RT (min)
Psilocybin 285.1021 205.1326, 58.0650 1.06
Baeocystin 271.0857 0.94

Phylogenetic results

The phylogenomic tree of Agaricineae is presented in Fig. 1. The analysis included 49 species: 47 species representing 13 families within Agaricineae and two outgroup species from Pluteineae, namely Amanita muscaria (L.) Lam. and Pluteus cervinus (Schaeff.) P. Kumm. Divergence times of Agaricineae were estimated using the r8s program based on the maximum likelihood (ML) phylogenomic tree, calibrated at a node within Nidulariaceae. All nodes are fully supported by bootstrap values, and divergence times are indicated near the nodes. Familial relationships are largely congruent with previous studies (Zhao et al. 2017; Li et al. 2020; Wang et al. 2023), except for the sister relationship between Hydnangiaceae and Psathyrellaceae recovered here, which contrasts with Dentinger et al. (2016). Five families (Agaricaceae, Hydnangiaceae, Nidulariaceae, Psathyrellaceae, and Strophariaceae) were well resolved as monophyletic, with stem ages ranging from 59 to 130 Myr. Panaeolus cyanescens and P. papilionaceus formed the panaeo-clade. This clade diverged at 87 Myr, contemporaneous with the origins of other Agaricineae families.

Figure 1.

Figure 1.

Phylogenomic tree of Agaricineae based on 1,764 single-copy, full-length BUSCO genes. The tree is rooted with Amanita muscaria and Pluteus cervinus. All nodes are fully supported by bootstrap values. Divergence times are indicated near the nodes. Green points indicate the mean stem ages of the families.

An extended sampling was applied in the multigene (ITS, LSU, SSU, rpb1, rpb2, and tef1) ML phylogenetic analysis of Agaricineae to further explore the phylogenetic relationships between the panaeo-clade and other families. The analysis included 137 samples representing 125 species from 14 families within Agaricineae. The panaeo-clade, comprising 21 species from two genera, formed a clade sister to Bolbitiaceae, with statistical support (BS/PP = 71/1.0; see Fig. 2).

The MCC tree for Panaeolus s.l. is presented in Fig. 3. Five main clades (A–E) received strong support (SH-aLRT/UFBoot/PP values higher than 80/90/0.95). Three main clades roughly correspond to the traditional circumscription of subgenera in Panaeolus s.l., namely clade A corresponding to subg. Panaeolina, clade B corresponding to subg. Panaeolus, and clade C corresponding to subg. Copelandia. The remaining two clades are clade D, represented by a single sample of Panaeolus sylvaticus, and clade E, composed of Staktophyllus. Main clades A–D all have a stem age of 64.5 Myr. The divergence time of Panaeolus s.l. estimated in this study is roughly the same as that reported by Bradshaw et al. (2023). Subclades were delimited within each main clade to discuss phylogenetic relationships among species. Each subclade is supported by statistical values (SH-aLRT/UFBoot/PP values higher than 80/90/0.95). Thirty-three known species are phylogenetically recognized.

Taxonomy

. Galeropsidaceae

Singer, Boletín de la Sociedad Argentina de Botánica 10: 61 (1962)

B57F6A8E-A22E-51F8-8B9B-CDFC32463717

Type.

Galeropsis Velen. 1930 [current name: Panaeolus (Fr.) Quél.]

Description.

Basidiomes small- to medium-sized, agaricoid or sequestrate. Spore print black. Pileus ovoid, parabolic, conic, campanulate, rarely convex and plane; white, grey, black, brown, rarely orange; dry, viscid, or glutinous, hygrophanous, with hygrophanous spots, and streaks, or non- hygrophanous. Lamellae crowded to subdistant, adnate, gray to black, variegated. Stipe equal, smooth, glabrous, pruinose, annulus membranous, rarely remaining still mature. Basidiospores brown, limoniform, ellipsoid to elongate, germ pore distinctive, smooth, punctate, verrucose. Cystidia abundant, this include caulocystidia, cheilocystidia, pleurocystidia and pileocystidia.

Habitat.

Grows in fertile areas, including pastures, grasslands, forests, and on dung of herbivores.

Genera included.

Panaeolus, Staktophyllus.

Notes.

The panaeo-clade was revealed to be monophyletic in previous studies (Moncalvo 2002; Walther 2005; Matheny et al. 2006) and is also supported as monophyletic in this study. With extended sampling, our study further supports ranking the panaeo-clade as a distinct family within Agaricineae based on the following evidence: first, it is monophyletic and occupies a phylogenetic position sister to Bolbitiaceae within Agaricineae (see Figs 1, 2); second, it diverged at 87 Myr, which is relatively similar to divergence times of other families in Agaricineae; third, it differs from other families in Agaricineae in a combination of morphological characteristics, including a saprotrophic lifestyle, black spore print, variegated lamellae, and dark brown basidiospores with a distinctive germ pore and a relatively thick wall. According to Art. 11.5, priority of equally published names is established by the first effectively published choice; therefore, the panaeo-clade should be named Galeropsidaceae rather than Panaeolaceae (Kalichman et al. 2020). Currently, Galeropsidaceae contains two genera, Panaeolus and Staktophyllus.

. Panaeolus

(Fr.) Quél., Mém. Soc. Émul. Montbéliard, Sér. 2 5: 151 (1872)

CC7B5A68-2898-541B-9B00-5D5238921E9C

Basionym.

Agaricus subg. Panaeolus Fr.

Type species.

Panaeolus papilionaceus (Bull.) Quél.

Description.

the same as description of Galeropsidaceae.

Notes.

The morphological synapomorphy of Panaeolus is a relatively small basidiome with variegated lamellae and blackish brown basidiospores. All known species are saprotrophic, and many of them are coprophilous. It is a worldwide genus known from all continents except Antarctica. The psilocybin-producing trait is known to be distributed in subg. Bresadolomyces and subg. Panaeolina. Based on the results of the phylogenetic analyses, Crucispora is synonymized with Panaeolus and placed in subg. Bresadolomyces. Three subgenera of Panaeolus are recognized based on phylogenetic evidence.

Subgenera included.

subg. Bresadolomyces, subg. Panaeolina, subg. Panaeolus.

. Panaeolus subg. Bresadolomyces

M.Q. He & R.L. Zhao subg. nov.

F3B206B9-078C-5A35-9054-195CB4B655EA

860264

Diagnosis.

Species of this subgenus have relatively thin-fleshed, dirty whitish or gray to grayish-brown pigmented basidiome, some species turning blue or bluish-gray when get injured; basidiospores smooth, ellipsoid, limoniform, cruciform-rhomboid.

Type species.

Panaeolus cyanescens Sacc.

Etymology.

Named in honor of Giacomo Bresàdola (1847–1929) for his research contributions to agarics taxonomy and introduction of Copelandia.

Synonyms.

Copelandia Bres., Hedwigia 53(1–2): 51 (1912) [1913] (nom. illeg., Shenzhen Code, Art. 52.1); Panaeolus subgen. Copelandia (Bres.) Ew. Gerhardt, Biblioth. Bot. 147: 32 (1996) (nom. illeg., Art. 52.1). – Type: Copelandia papilionacea (Bull.) Bres., Hedwigia 53(1–2): 51 (1912) [1913] (nom. inval., Art. 35.1); Crucispora E. Horak, New Zealand J. Bot. 9(3): 489 (1971).

Description.

Basidiome relatively thin-fleshed, dirty whitish or gray to grayish-brown pigmented, some species turning blue or bluish-gray when cut or bruised; the cap surface not slimy; basidiospores smooth, ellipsoid, limoniform, or cruciform-rhomboid; the hymenium always contains thick-walled pseudocystidia (metuloids) that often secrete crystals at the tip.

Notes.

The synonym name subg. Copelandia was proposed with the type P. papilionaceus (Gerhardt 1996). However, P. papilionaceus had already been designated as the type of Panaeolus subg. Panaeolus by Quélet (1872). According to the Shenzhen Code, Art. 52.1, Panaeolus subg. Copelandia is illegitimate. Subgenus Bresadolomyces is proposed mainly based on phylogenetic evidence to accommodate Copelandia-like species and species formerly placed in Crucispora. Copelandia-like species cluster together with Cr. rhombisperma in clade C, which is well supported statistically (SH-aLRT/PP = 96/1.0). Copelandia-like species are mainly characterized by grayish, relatively fragile basidiomes that turn blue when injured or bruised. They represent the main psilocybin-producing group within Panaeolus, with the most well-known species being P. cyanescens.

Species included.

P. axfordii Y.W. Hu, Karun., P.E. Mortimer & J.C. Xu, P. bisporus, P. cyanescens (Guzmán) Voto & Angelini, P. mexicanus, P. rhombispermus (Hongo) Birkebak, Voto & Ostuni.

. Panaeolus cyanescens

Sacc., Syll. Fung. 5: 1123 (1887).

8E66B8DD-ACB0-51E2-9BE0-4E7A33FB56E9

Notes.

Description, see Gerhardt (1996). Panaeolus cyanescens is a well-known species recognized for its psilocybin-producing trait. It is a relatively easy-to-recognize species in the wild because its white-to-gray basidiomes turn blue when wounded or touched. In the phylogenetic analyses, this species is placed in subclade C1, where it shows a sister relationship to the clade composed of P. axfordii, P. tropicalis, P. bisporus, and several unnamed samples.

Specimens examined.

China. Guizhou Province: Qiannan Buyi and Miao Autonomous Prefecture, Libo County, 4 August 1988, Jian-Zhe Ying, Chen-Liu Zong, and Ning Li, HMAS57723.

. Panaeolus subg. Panaeolina

(Maire) Bon & Courtec., Doc. Mycol. 32 (127–128): 77 (2003)

E5ADCC04-C5DC-5BF9-B219-B2A1E87DFFDD

Type species.

Panaeolus foenisecii (Pers.) J. Schröt.

Description.

The same as Galeropsidaceae.

Notes.

Species of subg. Panaeolina are clustered in clade A, which is a well-supported clade with nearly full statistical support (SH-aLRT/UFBoot/PP = 100/91/1.0). Based on the phylogenetic results, a broader circumscription of subg. Panaeolina is proposed. It includes three subclades, namely subclade A1, comprising most species from China; subclade A2, with the type species P. foenisecii, which represents the core clade of subg. Panaeolina; and subclade A3, including Anellaria-like species. In the sense of Panaeolus s.s., Panaeolina has been treated as a distinct genus. The off-black spore print has been used to separate Panaeolina from other genera (Singer 1986; Gerhardt 1996). However, determining a paler spore print is relatively difficult and subjective, especially in the field. Verrucose basidiospores have been considered a key character of Panaeolina; however, at present, only the type species, P. foenisecii, has been observed to possess verrucose basidiospores, whereas all other species form smooth basidiospores.

Species included.

P. acuminatus (P. Kumm.) Quél., P. antillarum (Fr.) Dennis, Kew Bull., P. cinctulus (Bolton) Sacc., P. fimicola (Pers.) Gillet, P. foenisecii, P. fraxinophilus A.H. Sm., P. grandis M.Q. He & R.L. Zhao, P. limoniformisporus M.Q. He & R.L. Zhao, P. medogensis M.Q. He & R.L. Zhao, P. nigrescens M.Q. He & R.L. Zhao, P. nirimbii (Watling & A.M. Young) Voto, P. pallidus M.Q. He & R.L. Zhao, P. paludosus Cleland, P. plantaginiformis (Lebedeva) E.F. Malysheva, P. semiovatus, P. subfoenisecii M.Q. He & R.L. Zhao, P. uliginosus Jul. Schäff., P. variabilicolor M.Q. He & R.L. Zhao.

. Panaeolus antillarum

(Fr.) Dennis, Kew Bull. 15(1): 124 (1961)

9929ED48-2D0A-5BD8-A547-50C329C0FFA1

Fig. 4

Figure 4.

Figure 4.

Basidiomes of Panaeolus antillarum in the field.

Basionym.

Agaricus antillarum Fr.

Description.

fide Desjardin and Perry (2017).

Psilocybin-producing.

Nonproducing (HMAS52750, see Suppl. material 1: fig. S1).

Notes.

Panaeolus antillarum was first described from St. Croix in the Greater Antilles (U.S. Virgin Islands). Later, it was found to be a worldwide species distributed in the New World (Caribbean islands, continental United States, Central and South America) and the Old World (Africa, Australia, China, Europe, India, and Southeast Asia) (Desjardin and Perry 2017).

Specimens examined.

China. Xizang Autonomous Region: Nyingchi Municipality, Mêdog County, 27 July 1983, Xiao-Lan Mao, HMAS52750; 3 August 1983, Xiao-Lan Mao, HMAS52751. Hebei Province: Zhangjiakou, August 1994, Xiao-Lan Mao and You-Zhi Wang, HMAS69911; Bejing: Zhongguancun, 27 September 1976, Shu-Xiao Sun, HMAS37291; Inner Mongolia Autonomous Region: Xilin Gol League, 11 August 2019, Jian-Yu Zhang, ZRL20191951.

. Panaeolus cinctulus

(Bolton) Sacc., Syll. fung. (Abellini) 5: 1124 (1887)

5726125B-FBF7-58B2-9723-E8EA8D4B558E

Fig. 5

Figure 5.

Figure 5.

Panaeolus cinctulus. a, b basidiomes in the field; c basidia; d basidiospores; e cheilocystidia; f caulocystidia. Scale bars: 20 μm (c, e, f); 10 μm (d).

Basionym.

Agaricus cinctulus Bolton 1792

Description.

Pileus 7.0–26.5 mm in diam., parabolic, obtusely conic, gray (pantone warm gray 1 c), light brown (pantone 4665 c), glabrous, surface dry, smooth, disc could be darker as light brown, margin straight or slightly decurved. Lamellae adnate, close, broad, mottled grayish to blackish, entire, white edge not distinctive. Stipe equal, hollow, 42.1–75.3 mm long, 1.4–2.6 mm thick, the same color as pileus, smooth, surface silk-like, longitudinally striate, especially on the upper side, base with whitish mycelium. Basidiomes getting brown when handling, bruising, and cutting.

Basidiospores 11.3–12.5 × 7.8–9.2 μm, [x = 11.8 ± 0.3 × 8.7 ± 0.3, Q = 1.3–1.5, Qm = 1.4 ± 0.1, n = 20], ellipsoid, blackish brown when mature, smooth, thick wall with germ pore. Basidia 20.7–25.8 × 9.7–12.8 μm, 4-spored, smooth, hyaline. Cheilocystidia 23.7–41.5 × 7.2–10.5 μm, narrowly clavate, with a slightly inflated head and base, thin wall, hyaline, smooth. Pleurocystidia absent. Pileocystidia not observed. Caulocystidia 14.0–46.3 × 4.0–9.3 μm, cylindrical, hyaline, slightly flexuose.

Habitat.

Grows in grassland.

Psilocybin-producing.

Producing (ZRL20200005, see Suppl. material 1: fig. S7).

Notes.

According to the results of the phylogenetic analyses, P. cinctulus is clustered in subclade A2 and is sister to the sequestrate species P. nirimbii. Morphologically, our samples exhibit smaller basidiomes (pileus 7.0–26.5 mm in diam.) and a paler pileus compared with the original description of P. cinctulus (Saccardo 1887) and the description provided by Stamets (1996).

Specimens examined.

China. Inner Mongolia Autonomous Region: Baotou, Olympics Park, 13 June 2019, Jian-Yu Zhang, ZRL20191912; Beijing: Chaoyang District, Olympics Park, 19 July 2020, Rui-Lin Zhao, ZRL20200005; Ningxia Hui Autonomous Region: Yinchuan, 11 September 1995, Xiaolan Mao, Cangkuan Wang, HMAS63178.

. Panaeolus foenisecii

(Pers.) J. Schröt., Botaniste 17(1–4): 187 (1926)

FA0155BC-5249-5E52-919A-571FF7956DBB

Fig. 6

Figure 6.

Figure 6.

Panaeolus foenisecii. a, b basidiomes in the field; c basidiospores; d cheilocystidia; e basidia; f wilted pileocystidia. Scale bars: 10 μm (c); 20 μm (d–f).

Basionym.

Agaricus foenisecii Pers. 1800

Description.

Pileus 7.6–17.6 mm in diam., parabolic, light brown (pantone 4685 c), brown (pantone 4645 c), glabrous, surface dry, hygrophanous especially at the margin, smooth, margin straight or slightly decurved. Lamellae adnate, subdistant, broad, mottled grayish to blackish, entire, edge white. Stipe equal, hollow, 24.1–47.3 mm long, 1.6–2.6 mm thick, brown, the same color as pileus, smooth, longitudinally striate, occasionally pruinose on the upper side, base with whitish mycelium. Basidiomes getting brown when handling, bruising, and cutting.

Basidiospores 11.3–12.5 × 7.8–9.2 μm, [x = 11.8 ± 0.3 × 8.7 ± 0.3, Q = 1.3–1.5, Qm = 1.4 ± 0.1, n = 20], ellipsoid, punctate, verrucose, brown, reddish brown, thick wall with germ pore. Basidia 25.8–39.6 × 8.9–12.5 μm, 4-spored, smooth, hyaline. Cheilocystidia 28.3–61.4 × 5.1–11.4 μm, narrowly clavate, with an inflated head and base, hyaline, smooth. Pleurocystidia absent. Cuticle composed of cellular or hymeniform cell, pileocystidia 22.1–79.2 × 12.3–50.5 μm, spheropedunculate, hyaline. Caulocystidia not observed.

Habitat.

Grows on fertile soil as pastures, grasslands, and forests.

Psilocybin-producing.

Nonproducing (ZRL20210662, see Suppl. material 1: fig. S6).

Notes.

Panaeolus foenisecii is characterized by its punctate to verrucose basidiospores.

Specimens examined.

China. Xizang Autonomous Region: Nyingchi Municipality, Zayü County, 29.20.1°N, 97.5.16°E, alt. 4230 m, 23 July 2021, Mao-Qiang He, ZRL20210661, ZRL20210662; Shigatse Municipality: Gyirong County, Gyirong Town, 28.22.39°N, 85.19.40°E, alt. 2780 m, 02 August 2022, Mao-Qiang He, ZRL20220802.

. Panaeolus grandis

M.Q. He & R.L. Zhao sp. nov.

05443C1A-ACFE-5DDF-AC0D-9BC23D0AC269

860267

Fig. 7

Figure 7.

Figure 7.

Panaeolus grandis. a–c basidiomes in the field; d basidiospores; e basidia; f caulocystidia; g cheilocystidia. Scale bars: 10 μm (d); 20 μm (e–g).

Etymology.

grandis (Lat.) refers to the relatively large basidiomes of this species in Panaeolus.

Diagnosis.

Panaeolus grandis has relatively large basidiome with a campanulate, brown pileus and long stipe; cheilocystidia tibiiform with an inflated base.

Holotype.

CHINA. Xizang Autonomous Region: Shigatse Municipality, Yadong County, 27.25.17°N, 88.56.32°E, alt. 3024 m, 26 July 2022, Mao-Qiang He, HMAS287495 (ZRL20220208).

Description.

Pileus 13.9–75.6 mm in diam., campanulate, disc light brown (pantone 3596 c), brown (pantone 2441 c), paler elsewhere (pantone 4755 c), surface dry, hygrophanous, sometimes rugulose around disc, margin straight, sometimes slightly uplifted. Lamellae adnate, subdistant, broad, mottled grayish to blackish, entire, edge white. Stipe equal, hollow, 63.8–156.8 mm long, 1.7–5.0 mm thick, light brown, the same color as pileus (pantone 4755 c), smooth, longitudinally striate, pruinose, base with whitish mycelium.

Basidiospores 12.0–13.9 × 7.1–9.6 μm, [x = 12.9 ± 0.6 × 8.1 ± 0.6, Q = 1.3–1.8, Qm = 1.6 ± 0.1, n = 20], ellipsoid, broadly ellipsoid, smooth, blackish brown, thick wall with germ pore. Basidia 22.3–29.8 × 8.9–10.6 μm, 4-spored, smooth, hyaline. Cheilocystidia 25.7–41.9 × 5.3–9.3 μm, tibiiform with an inflated base, hyaline, smooth. Pleurocystidia absent. Cuticle composed of large vesicles, pileocystidia not observed. Caulocystidia 43.9–102.2 × 6.0–10.5 μm, cylindrical, hyaline, some with brown pigment inside.

Habitat.

Grows on soil in grasslands, pine forests.

Psilocybin-producing.

Nonproducing (ZRL20220208, see Suppl. material 1: fig. S14).

Notes.

According to the results of the phylogenetic analyses, P. grandis is clustered in subclade A1. Morphologically, P. grandis differs from other species in Panaeolus by its relatively large-sized basidiome with a campanulate, brown pileus and a long stipe. Although P. pallidus also has a basidiome of similar size, it forms larger basidiospores (17.2 ± 0.6 × 11.8 ± 0.4 μm) compared with P. grandis.

Specimen examined.

China. Xizang Autonomous Region: Shigatse Municipality, Yadong County, 27.25.20°N, 88.55.6°E, alt. 3254 m, 27 July 2022, Mao-Qiang He, ZRL20220352.

. Panaeolus limoniformisporus

M.Q. He & R.L. Zhao sp. nov.

192DA34D-2025-593B-9CC4-0DD45BE91E2D

860268

Fig. 8

Figure 8.

Figure 8.

Panaeolus limoniformisporus. a–c basidiomes in the field; d basidia; e basidiospores; f cheilocystidia; g pleurocystidia. Scale bars: 20 μm (d, f–g); 10 μm (e).

Etymology.

limoniformisporus (Lat.) refers to the limoniform basidiospores.

Diagnosis.

Panaeolus limoniformisporus has gray basidiomes with conic, hygrophanous pileus and limoniform basidiospores.

Holotype.

CHINA. Gansu Province: Wuwei, Tianzhu County, Kela, 19 August 2018, Zhi-Lin Ling, HMAS287497 (ZRL20181122).

Description.

Pileus 13.1–39.9 mm in diam., conic, parabolic, background gray (pantone cool gray 1 c) to light brown (pantone 4685 c), surface dry, smooth, mottled, and radially streaked by blackish brown (pantone 7533 c) hygrophanous stripes, also could be totally white or light brown without radial stripes, margin slightly exceeding gills. Lamellae adnate, sub-close, broad, mottled grayish to blackish, entire, with a white edge. Stipe equal, hollow, 74.9–108.6 mm long, 1.9–5.0 mm thick, white, longitudinally striate, especially on the upper side, base with whitish mycelium, getting darker when handling.

Basidiospores 13.7–15.1 × 10.0–11.3 μm, [x = 14.3 ± 0.4 × 10.7 ± 0.4, Q = 1.3–1.4, Qm = 1.3 ± 0.0, n = 20], limoniform, blackish brown, smooth, thick wall with germ pore. Basidia 24.1–28.9 × 12.6–14.9 μm, 4-spored, smooth, hyaline. Cheilocystidia 23.6–40.5 × 4.2–9.9 μm, narrowly cylindrical, flexuose, with a slightly inflated base, hyaline, smooth. Pleurocystidia 21.4–27.5 × 10.7–13.8 μm, spheropedunculate, hyaline. Pileocystidia not observed. Caulocystidia not observed.

Habitat.

Grows in pastures and on soil.

Psilocybin-producing.

Nonproducing (ZRL20181122, see Suppl. material 1: fig. S12).

Notes.

Panaeolus limoniformisporus is revealed to be the sister species of P. medogensis (Figs 2, 3). Morphologically, both species form small-sized basidiomes, but the pileus differs between them: the pileus of P. limoniformisporus is gray, black, or white, slightly fibrillose, and hygrophanous, whereas the pileus of P. medogensis is brown and glabrous.

Specimens examined.

China. Sichuan Province: Tibetan Autonomous Prefecture of Garzê, Batang County, 20 July 2015, Mao-Qiang He, ZRL2015390; Yajiang County, Gexi Natural Reserve, 15 August 2020, Mao-Qiang He, ZRL20200165; Xizang Autonomous Region: Nyingchi Municipality, Nang County, 19 September 2015, Xu-Ming Bai, ZRL20152331; Gansu Province: Wuwei, Tianzhu County, Kela, 19 August 2018, Zhi-Lin Ling, ZRL20180975; Shigatse Municipality, Gyirong County, Gyirong Town, 28.22.39°N, 85.19.40°E, alt. 2780 m, 02 August 2022, Mao-Qiang He, ZRL20220678.

. Panaeolus medogensis

M.Q. He & R.L. Zhao sp. nov.

5155D71B-AF1D-53EE-B7AA-1EA035BBEEFA

860269

Fig. 9

Figure 9.

Figure 9.

Panaeolus medogensis. a, b basidiomes in the field; c caulocystidia; d basidiospores; e pleurocystidia; f basidia; g cheilocystidia. Scale bars: 20 μm (c, e–g); 10 μm (d).

Etymology.

medogensis (Lat.) refers to the type locality, Mêdog County, in the Xizang Autonomous Region of China.

Diagnosis.

Panaeolus medogensis has small basidiomes with glabrous and rugulose pileus and narrowly clavate cheilocystidia with inflated base.

Holotype.

CHINA. Xizang Autonomous Region: Nyingchi Municipality, Mêdog County, 29.47.30°N, 95.41.50°E, alt. 3670 m, 24 July 2021, Mao-Qiang He, HMAS287498 (ZRL20210733).

Description.

Pileus 7.6–17.6 mm in diam., parabolic, light gray (pantone 427 c), light brown (pantone 4685 c), brown (pantone 4645 c), color radially getting paler from disc to margin, glabrous, surface dry, smooth, rugulose especially in/around the disc, margin straight or slightly decurved. Lamellae adnate, subdistant, broad, mottled grayish to blackish, entire, edge white. Stipe equal, hollow, 24.1–47.3 mm long, 1.6–2.6 mm thick, brown, the same color as pileus, longitudinally striate, some pruinose, base with whitish mycelium. Basidiomes getting brown when handling, bruising, and cutting.

Basidiospores 13.2–15.0 × 9.2–11.4 μm, [x = 13.9 ± 0.5 × 10.3 ± 0.6, Q = 1.2–1.5, Qm = 1.4 ± 0.1, n = 20], ellipsoid, limoniform, brown, thick wall with germ pore. Basidia 29.7–40.0 × 11.4–14.5 μm, 4-spored, smooth, hyaline. Cheilocystidia 23.1–35.9 × 4.2–8.7 μm, narrowly clavate, with an inflated base, slightly flexuose, hyaline, smooth. Pleurocystidia 22.4–37.7 × 10.7–14.1 μm, clavate, hyaline. Pileocystidia not observed. Caulocystidia 32.0–72.2 × 3.7–11.9 μm, long clavate, hyaline, some slightly flexuose.

Habitat.

Grows on fertile soil as pastures, grasslands, and forests.

Psilocybin-producing.

Nonproducing (ZRL20210733, see Suppl. material 1: fig. S13).

Notes.

Panaeolus medogensis was found in a grazing area that is also a forest edge with lush grasses. According to the results of the phylogenetic analyses, P. medogensis is sister to P. limoniformisporus. Morphologically, the two species can be distinguished by the pileus. Compared with other species in Panaeolus, P. medogensis is characterized by its small-sized basidiomes with a brown, glabrous, and rugulose pileus.

. Panaeolus nigrescens

M.Q. He & R.L. Zhao sp. nov.

008786BE-1DD7-5CE1-9EA0-BF05E4A6F7C0

860270

Fig. 10

Figure 10.

Figure 10.

Panaeolus nigrescens. a–d basidiomes in the field; e pileocystidia; f basidiospores; g basidia; h caulocystidia; i cheilocystidia. Scale bars: 20 μm (e, g–i); 10 μm (f).

Etymology.

nigrescens (Lat.) refers to the black, grayish-black color of the pileus.

Diagnosis.

Panaeolus nigrescens has small, gray basidiomes with black hygrophanous stripes on the pileus and ellipsoid basidiospores.

Holotype.

CHINA. Gansu Province: Zhangye, 17 August 2018, Zhi-Ling Lin, HMAS287499 (ZRL20180732)

Description.

Pileus 6.9–28.8 mm in diam., conic, occasionally campanulate when getting mature, disc slightly umbonate or rarely flattened, background gray (pantone 421 c), disc black, hygrophanous stripes black (pantone 426c), mottled and radially streaked, surface dry, margin slightly crenate. Lamellae adnate, close, broad, mottled grayish, entire, with a white edge. Stipe equal, flexuous, hollow, 52.6–126.7 mm long, 1.8–4.1 mm thick, white, pruinose, longitudinally striate, base with whitish mycelium, getting brown when touched, cut, or bruised.

Basidiospores 10.7–14.0 × 6.5–8.7 μm, [x = 12.0 ± 0.7 × 7.6 ± 0.5, Q = 1.5–1.8, Qm = 1.6 ± 0.1, n = 20], ellipsoid, blackish brown when mature, smooth, thick wall, germ pore distinctive. Basidia 19.6–26.0 × 8.8–11.1 μm, 4-spored, smooth, hyaline. Cheilocystidia 26.2–46.4 × 3.3–8.8 μm, narrowly cylindrical or flexuose, with a slightly inflated base, hyaline, smooth. Pleurocystidia absent. Cuticle composed of large vesicles, pileocystidia 12.9–46.9 × 9.4–35.5 μm, spheropedunculate, hyaline. Caulocystidia 12.1–47.3 × 5.0–10.1 μm, cylindrical or narrowly clavate, flexuose, or narrowly obovoid, hyaline, smooth.

Habitat.

Grows on pastures and soil.

Psilocybin-producing.

Nonproducing (ZRL20180732, see Suppl. material 1: fig. S10).

Notes.

Panaeolus nigrescens is a distinctive species in subclade A1, characterized by its black or grayish black basidiomes, a pruinose stipe with longitudinal striations, and ellipsoid basidiospores. Compared with closely related species, namely P. limoniformisporus, P. medogensis, and P. pallidus, P. limoniformisporus most closely resembles P. nigrescens in the field. However, under the microscope, the two species can be separated by differences in basidiospore shape, with P. nigrescens having ellipsoid basidiospores and P. limoniformisporus having limoniform basidiospores.

Specimens examined.

China. Gansu Province: Zhangye, Qilian Mountain National Nature Reserve, Kangle Grassland, 38.384457°N, 100.653658°E, alt. 2800 m, 30 August 2016, Rui-Lin Zhao, Jean-Marc Moncalvo, ZRL20161807, ZRL20161828, ZRL20161875; Haichaoba Forestry Park, 26 August 2018, Ming-Zhe Zhang, ZRL20181924.

. Panaeolus pallidus

M.Q. He & R.L. Zhao sp. nov.

656C2547-15E7-594E-AE88-760F74289D8D

860266

Fig. 11

Figure 11.

Figure 11.

Panaeolus pallidus. a, b basidiomes in the field; c pleurocystidia; d pileocystidia; e basidiospores; f basidia; g cheilocystidia; h caulocystidia. Scale bars: 20 μm (c, d, f–h); 10 μm (e).

Etymology.

pallidus (Lat.) refers to the white and light color of the basidiome.

Diagnosis.

Panaeolus pallidus has relatively large basidiomes with limoniform basidiospores and narrowly cylindrical, flexuose cheilocystidia.

Holotype.

CHINA. Gansu Province: Wuwei, Qilian Mountain National Nature Reserve, Haxi, 22 August 2018, Mao-Qiang He, HMAS287494 (ZRL20180988).

Description.

Pileus 17.3–73.6 mm in diam., hemispheric most, also could be plane when totally mature, disc slightly umbonate or flattened, gray (pantone warm gray 1 c), light brown (pantone 467 c), sometimes hygrophanous, surface dry, smooth, occasionally rugulose, margin slightly exceeding gills. Lamellae adnate, close, broad, mottled grayish to blackish, entire, with a white edge. Stipe equal, hollow, 91.8–147.4 mm long, 3.0–5.4 mm thick, with the same color as pileus, smooth, pruinose, longitudinally striate, especially on the upper side, base with whitish mycelium.

Basidiospores 16.2–18.2 × 11.1–12.6 μm, [x = 17.2 ± 0.6 × 11.8 ± 0.4, Q = 1.4–1.5, Qm = 1.5 ± 0.0, n = 20], limoniform, blackish brown when mature, smooth, thick wall, germ pore distinctive. Basidia 24.6–40.6 × 10.7–15.3 μm, 4-spored, smooth, hyaline. Cheilocystidia 36.0–61.3 × 4.6–11.4 μm, narrowly cylindrical, flexuose, with an inflated or globose head, hyaline, smooth. Pleurocystidia 29.0–33.7 × 11.1–13.6 μm, clavate to narrowly clavate, hyaline, smooth. Cuticle composed of large vesicles, pileocystidia 20.3–32.6 × 15.3–28.9 μm, spheropedunculate, hyaline. Caulocystidia 33.2–66.4 × 4.3–5.8 μm, cylindrical, rarely flexuose, hyaline, smooth.

Habitat.

Grows in pastures and on soil.

Psilocybin-producing property.

nonproducing (ZRL20180988, see Suppl. material 1: fig. S11).

Notes.

In the phylogenetic tree (Fig. 3), P. pallidus is placed in subclade A1. The phylogenetically closest species are P. limoniformisporus and P. medogensis. Panaeolus pallidus was observed to have a plane pileus (observed in ZRL20190137), which is rarely observed in Panaeolus. In the field, P. grandis resembles P. pallidus in having light-colored basidiomes, but the two species differ in cheilocystidia, with P. pallidus having narrowly cylindrical and flexuose cheilocystidia, whereas P. grandis has tibiiform cheilocystidia with an inflated base.

Specimen examined.

China. Beijing, Fangshan District, Baicaopan Nature Park, 01 August 2019, Rui-Lin Zhao, ZRL20190137.

. Panaeolus semiovatus

(Sowerby) S. Lundell & Nannf., Fungi Exsiccati Suecici 11–12(Sched.): 14 (no. 537) (1938)

376F462B-60BF-57BD-A7C6-27411BCB0116

Fig. 12

Figure 12.

Figure 12.

Panaeolus semiovatus. a–d basidiomes in the field; e basidia; f basidiospores; g cheilocystidia. Scale bars: 20 μm (e, g); 10 μm (f).

Basionym.

Agaricus semiovatus Sowerby

Description.

Pileus 7–41 mm in diam., ovoid when young, then parabolic (half-egg), surface dry, smooth (could be cracked where habitat is dry), glabrous, with light color from white to bright brown (pantone 4655 c), margin straight. Lamellae adnate, close, entire, broad, mottled grayish first then becoming blackish when mature, with a white edge. Stipe equal, hollow, 17–110 mm long, 1–7 mm thick, with some color as pileus, smooth, base occasionally could be brown, always with whitish mycelium. Annulus always remaining still mature, membranous, white, medium.

Basidiospores 18.9–22.3 × 10.9–12.6 μm, [x = 20.8 ± 0.9 × 11.7 ± 0.5, Q = 1.7–2.0, Qm = 1.8 ± 0.1, n = 20], ellipsoid, elongate, blackish brown when mature, smooth, thick wall, germ pore distinctive. Basidia 30.7–41.0 × 11.5–21.3 μm, 4-spored, smooth, hyaline. Cheilocystidia 26.6–39.4 × 8.1–20.8 μm, with virous shapes, clavate with a slightly narrow apex, Y-shaped, pyriform, hyaline, smooth. Pleurocystidia absent. Cuticle composed of large vesicles, pileocystidia not observed. Caulocystidia not observed.

Habitat.

Grows in pastures, on dung of horses and cows.

Psilocybin-producing.

Nonproducing (ZRL20201278, see Suppl. material 1: fig. S2).

Notes.

Panaeolus semiovatus is characterized by its medium- to large-sized basidiomes, a parabolic and glabrous pileus of light color, and a permanent annulus that persists at maturity. These characteristics make it a morphologically distinctive species in the wild, especially because of its large-sized basidiomes.

Specimens examined.

China. Sichuan Province: Tibetan Autonomous Prefecture of Garzê, Batang County, Cuopugou, 20 July 2015, Mao-Qiang He, ZRL2015429; Zhubalong Natural Reserve, 29°39'39.48"N, 99°5'37.68"E, alt. 4311 m, 19 August 2020, by Xin-Yu Zhu, Xi-Xi Han, ZRL20201190, ZRL20201375; Litang County, Zhaga Mountain, 20 August 2020, Xi-Xi Han, Bin Cao, ZRL20201260, ZRL20201261, ZRL20201278; Nuoergai County, 13 September 1992, Xiaolan Mao, HMAS61642; Gansu Province: Zhangye, Sunan County, Kangle, 27 August 2018, Ming-Zhe Zhang, ZRL20181933; Beijing: Fangshan District, Baicaopan Nature Park, 1 August 2019, Rui-Lin Zhao, ZRL20190162; Xizang Autonomous Region: Nyingchi Municipality, Mêdog County, Xironggou, 29.42.33°N, 95.35.8°E, alt. 2800 m, 25 July 2021, Bin Cao, ZRL20210938, ZRL20210939; 28°36'26"N, 98°6'11"E, alt. 3848 m, ZRL20231351; Shigatse Municipality, Yadong County, 27.25.20°N, 88.55.6°E, alt. 3254, 27 July 2022, Mao-Qiang He, ZRL20220286; Jilin Province: 2 September 1992, Zongliu Chen, Suxiao Sun, HMAS59847; Xinjiang Uygur Autonomous Region: 10 August 1985, Li Fan, Yumei Li, HMAS86009; Qinghai Province: Beishan National Forestry Park, 36°55'41"N, 102°26'7"E, alt. 2427 m, 9 July 2023, Mao-Qiang He, ZRL20230570, ZRL20235586, ZRL20235598, ZRL20235619; 38°3'13"N, 100°23'54"E, alt. 3297 m, 29 August 2023, Mao-Qiang He, ZRL20235824.

. Panaeolus subfoenisecii

M.Q. He & R.L. Zhao sp. nov.

13D385C5-D634-5F47-95BE-7E95FE0CCBBD

860271

Fig. 13

Figure 13.

Figure 13.

Panaeolus subfoenisecii. a, b basidiomes in the field; c basidiospores; d basidia; e cheilocystidia. Scale bars: 10 μm (c); 20 μm (d, e).

Etymology.

sub refers to it being morphologically the same and phylogenetically close to P. foenisecii.

Diagnosis.

Panaeolus subfoenisecii is phylogenetically sister to P. foenisecii but has smooth basidiospores.

Holotype.

CHINA. Xizang Autonomous Region: Shigatse Municipality, Gyirong County, Gyirong Town, 28.22.39°N, 85.19.40°E, alt. 2780 m, 02 August 2022, Mao-Qiang He, HMAS287492 (ZRL20220850).

Description.

Pileus 10.6–15.5 mm in diam., obtusely conic, brown (pantone 2470 c), disc darker (pantone 2469 c), hygrophanous, sometimes paler at margin, surface dry, radially rugulose, margin straight or decurved. Lamellae adnate, subdistant, broad, mottled grayish to blackish, entire, edge white. Stipe equal, hollow, 43.0–52.1 mm long, 1.0–2.0 mm thick, brown, the same color as pileus (pantone 2469 c), smooth, longitudinally striate, pruinose on the side close to the cap, base with whitish mycelium.

Basidiospores 11.1–12.8 × 6.5–8.3 μm, [x = 12.2 ± 0.5 × 7.5 ± 0.1, Q = 1.4–1.8, Qm = 1.6 ± 0.1, n = 20], ellipsoid, smooth, brown, blackish brown, thick wall with germ pore. Basidia 17.1–23.9 × 8.5–11.7 μm, 4-spored, smooth, hyaline. Cheilocystidia 14.4–43.6 × 3.1–7.7 μm, cylindro-clavate, with lightly inflated head and base, hyaline, smooth. Pleurocystidia absent. Cuticle composed of large vesicles, pileocystidia not observed. Caulocystidia absent.

Habitat.

Grows on fertile soil as pastures and grasslands.

Psilocybin-producing.

Producing (ZRL20220850, Suppl. material 1: fig. S8).

Notes.

Panaeolus subfoenisecii is phylogenetically close to and macromorphologically resembles P. foenisecii. The two species can be separated under the microscope in that P. subfoenisecii has smooth basidiospores, whereas P. foenisecii has verrucose basidiospores.

Specimen examined.

China. Xizang Autonomous Region: Shigatse Municipality, Gyirong County, Gyirong Town, 28.22.39°N, 85.19.40°E, alt. 2780 m, 02nd August 2022, Mao-Qiang He, ZRL20220801.

. Panaeolus variabilicolor

M.Q. He & R.L. Zhao sp. nov.

C91575F3-B4CE-5729-A4A7-CBED63705985

860272

Fig. 14

Figure 14.

Figure 14.

Panaeolus variabilicolor. a–f basidiomes in the field; g basidiospores; h caulocystidia; i basidia; j cheilocystidia. Scale bars: 10 μm (g); 20 μm (h–j).

Etymology.

variabilicolor (Lat.) refers to several colors of basidiome are observed.

Diagnosis.

Panaeolus variabilicolor has hygrophanous or non-hygrophanous pileus, limoniform basidiospores, and cylindrical, clavate caulocystidia.

Holotype.

CHINA. Xizang Autonomous Region: Shigatse Municipality, Yadong County, 27.25.17°N, 88.56.32°E, alt. 3024 m, 26 July 2022, Mao-Qiang He, HMAS287496 (ZRL20220096).

Description.

Pileus 7.8–32.5 mm in diam., campanulate, conic, surface dry, hygrophanous, non-hygrophanous, color variable, gray (pantone 427c), grayish black (pantone 412c), light brown (pantone 166c), reddish brown (pantone 7583c), sometimes longitudinally striate near the margin, margin straight, uplifted, or decurved, occasionally with veil remnants. Lamellae adnate, close, entire, mottled grayish first then becoming blackish when mature, with a white edge. Stipe equal, hollow, 37.4–135.9 mm long, 1–2.7 mm thick, with some but darker color as pileus, smooth, slightly pruinose when basidiomes are fresh or young, base with whitish mycelium.

Basidiospores 9.9–12.2 × 7.5–8.5 μm, [x = 10.7 ± 0.6 × 8.0 ± 0.3, Q = 1.2–1.4, Qm = 1.3 ± 0.1, n = 20], lager basidiospores were observed in ZRL20220096 as 12.3–15.1 × 9.1–11.5 μm, [x = 14.1 ± 0.7 × 10.3 ± 0.7, Q = 1.3–1.5, Qm = 1.4 ± 0.1, n = 20], limoniform, blackish brown when mature, smooth, thick wall, germ pore distinctive. Basidia 18.2–27.2 × 7.0–10.1 μm, 4-spored, smooth, hyaline. Cheilocystidia 15.4–34.8 × 3.8–8.2 μm, cylindrical with a slightly inflated apex and base, flexuose, hyaline, smooth. Pleurocystidia absent. Cuticle composed of large vesicles, pileocystidia not observed. Caulocystidia 12.9–53.8 × 4.2–7.8 μm, cylindrical, clavate.

Habitat.

Grows on fertile soil as pastures, grasslands, and forests, and on dungs.

Psilocybin-producing.

Nonproducing (ZRL20220096, see Suppl. material 1: fig. S9).

Notes.

Different basidiome colors were observed in P. variabilicolor. The variable basidiome color makes it difficult to distinguish this species in the field. For example, the basidiomes of ZRL20210525 are orange brown and were found on dung in grassland. However, the basidiomes of ZRL20220075 and ZRL2022096 are grayish black and were found on soil in forest. Thus far, this species has only been found in the Xizang Autonomous Region. In the phylogenetic tree (Fig. 3), P. variabilicolor has a sister relationship with the clade composed of P. acuminatus and P. paludosus. Compared with these two species, P. variabilicolor can be easily distinguished by its relatively large basidiomes (7.8–32.5 mm in diam.).

Specimens examined.

China. Xizang Autonomous Region: Nyingchi Municipality, Chawalong, 28.33.44°N, 98.15.27°E, alt. 2670 m, 21 July 2021, Mao-Qiang He, ZRL20210525; Shigatse Municipality, Yadong County, 27.25.17°N, 88.56.32°E, alt. 3024 m, 26 July 2022, Mao-Qiang He, ZRL20220075, ZRL20220205; Dinggyê County, 27.55.15°N, 87.21.37°E, alt. 3060 m, 29 July 2022, Dorji Phurbu, ZRL20220144; Gyirong County, Gyirong Twon, 28.23.45°N, 85.23.34°E, alt. 3441 m, 2 August 2022, Jia-Xin Li, ZRL20220735.

. Panaeolus subg. Panaeolus

(Fr.) Quél.

3D79680A-C856-5647-9760-B51F463C8718

Basionym.

Agaricus subgen. Panaeolus Fr., Summa vegetabilium Scandinaviae 2: 297 (1849)

Type species.

Panaeolus papilionaceus

Notes.

Traditionally, subgenus Panaeolus is roughly equivalent to Panaeolus s.s. According to the results of the phylogenetic analyses, the type species P. papilionaceus is clustered in clade B1 together with other species referred to as the P. papilionaceus species complex in some studies (Voto and Angelini 2024). Clade B is phylogenetically supported with statistical values of 97/96/1.0 (SH-aLRT/UFBoot/PP). Two subclades are supported: B1 is a widely distributed lineage with samples from the Americas, Asia, Europe, and Oceania, whereas B2, represented by a single species, P. punjabensis Asif, Firdous, Izhar, Niazi & Khalid, is known only from western Asia.

Species included.

P. alcis M.M. Moser, P. desertorum (Velen. & Dvořák) E.F. Malysheva, G. Moreno, Svetash. & M. Villarreal, P. detriticola Voto & Bougher, P. pantropicalis Voto, Angelini & Barrett, P. papilionaceus, P. parvisporus (Ew. Gerhardt) Voto & Angelini, P. punjabensis, P. ranwuensis M.Q. He, R.L. Zhao & B. Cao, P. xiaolanii M.Q. He & R.L. Zhao.

. Panaeolus papilionaceus

(Bull.) Quél., Mém. Soc. Émul. Montbéliard, Sér. 2 5: 152 [122 repr.] (1872)

B692FA70-6561-5607-B4F1-5CCB469990C1

Fig. 15

Figure 15.

Figure 15.

Panaeolus papilionaceus. a–f basidiomes in the field; g basidiospores; h pileocystidia; i basidia; j caulocystidia; k cheilocystidia. Scale bars: 10 μm (g, h); 20 μm (i, j, k).

Basionym.

Agaricus papilionaceus Bull., Herb. Fr. (Paris) 1: 561 (1781).

Description.

Pileus 4–19 (–49) mm in diam., conical to broadly conical, surface dry, smooth, occasionally hygrophanous, color variable, from gray (pantone 427 c), grayish olive (pantone 7536 c) to black (pantone 412 c), brown (pantone 7587 c) is also observed (in ZRL20220358), usually paler at edge, margin entire, covered by white, triangular veil remnants. Lamellae adnate, close, broad, mottled grayish first then becoming blackish when mature, entire, with a white edge. Stipe equal, hollow, 13–140 mm long, up to 2 mm thick, always the same color as pileus, gray to black, dark purple, paler above, smooth, pruinose especially on the side close to the cap, occasionally with whitish mycelium.

Basidiospores 15.7–18.3 × 9.6–12.4 μm, [x = 16.9 ± 0.6 × 11.5 ± 0.7, Q = 1.4–1.7, Qm = 1.3 ± 0.1, n = 20], limoniform, ellipsoid, blackish brown when mature, smooth, thick wall, protruding germ pore. Basidia 22.1–27.0 × 13.9–16.3 μm, 4-spored, smooth, hyaline. Cheilocystidia 23.2–33.4 × 2.9–6.6 μm, cylindrical or narrowly clavate, flexuose, hyaline, smooth. Pleurocystidia absent. Cuticle composed of large vesicles, pileocystidia spheropedunculate, hyaline, some light brown, darker at the base. Caulocystidia 43.0–60.9 × 4.1–7.7 μm, cylindrical or narrowly clavate, flexuose, hyaline and light brown, smooth.

Habitat.

Grows in pastures, on dung of horses and cows.

Psilocybin-producing.

Nonproducing (ZRL20210652, see Suppl. material 1: fig. S4).

Notes.

Panaeolus papilionaceus is characterized by its small-sized basidiomes, a conical to broadly conical pileus, and limoniform basidiospores. An extremely small mature basidiome was observed in ZRL20220202, in which the pileus is 4 mm in diam. and the stipe is 13 mm long.

Specimens examined.

China. Yunan Province: Dêqên Tibetan Autonomous Prefecture, Shangri-la City, 23 July 2012, collected by Rui-Lin Zhao, ZRL2012412; Inner Mongolia Autonomous Region: Hulunbeier City, Lalantun, Chaihe Wildlife Natural Reserve, 47°32'44"N, 121°13'22"E, alt. 810 m, 27 August 2017, Zhilin Ling, ZRL20170629; Xinbaerhuzuo County, 49°45'20"N, 120°12'9"E, alt. 510 m, 26 August 2017, Zhilin Ling, ZRL20170653; Gansu Province: Wuwei, Tianzhu County, 19 August 2018, Bin Cao, ZRL20181046; Beijing: Fangshan District, Baicaopan Nature Park, 1 August 2019, Rui-Lin Zhao, ZRL20190135; Sichuan Province: Garze Tibetan Autonomous Prefecture, Litang County, 21 August 2019, Bin Cao, ZRL20191490; Sichuan Province: Li County, 1 August 1958, Qionglin Hu, HMAS23784; Jiuzhaigou, 9 June 1983, Huaan Wen, Jingjun Su, HMAS51233; Xizang Autonomous Region: Nyingchi Municipality, Chawalong, 28.36.46°N, 98.5.22°E, alt. 4110 m, 21 July 2021, Mao-Qiang He, ZRL20210652; Qamdo Municipality, Baxoi County, 29.47.37°N, 95.53.20°E, alt. 2870 m, 23 July 2021, Rui-Lin Zhao, ZRL20210692, ZRL20210750; Xizang Autonomous Region: Shigatse Municipality, Yadong County, 27.25.17°N, 88.56.32°E, alt. 3024 m, 26 July 2022, Mao-Qiang He, ZRL20220092, ZRL20220153, ZRL20220201, ZRL20220202, ZRL20220203, ZRL20220358; Gyirong County, 28.22.39°N, 85.19.40°E, alt. 2780 m, 2nd August 2022, Jiaxin Li, ZRL20220703; Ningxia Hui Autonomous Region, 24 August 1997, Huaan Wen, Suxiao Sun, HMAS72699; Hubei Province: Shennongjia forestry district, Dajiuhu, 24 June 2023, Mao-Qiang He, ZRL20230343.

. Panaeolus parvisporus

(Ew. Gerhardt) Voto & Angelini, Mycological Observations 9: 21 (2024)

C6C22B80-5A18-5499-8D35-CCF489051C94

Fig. 16

Figure 16.

Figure 16.

Panaeolus parvisporus. a–d basidiomes in the field; e basidia; f pileocystidia; g caulocystidia; h basidiospores; i cheilocystidia. Scale bars: 10 μm (h); 20 μm (e, g, i).

Description.

Pileus 16–38 mm in diam., ovoid when young, then parabolic or occasionally convex when getting mature, light brown (pantone 4685 c), brown (pantone 4645 c), surface dry, surface could be cracked with erect darker scales, margin slightly exceeding gills. Lamellae adnate, close, broad, mottled grayish first then becoming blackish-brown when mature, entire, with a white edge. Stipe equal, hollow, 19–54 mm long, 2–4 mm thick, brown, usually con-color with the pileus, smooth, pruinose, base with whitish mycelium, base getting darker when touched or bruised.

Basidiospores 14.4–16.9 × 9.6–11.1 μm, [x = 15.7 ± 0.6 × 10.4 ± 0.5, Q = 1.4–1.6, Qm = 1.5 ± 0.1, n = 20], ellipsoid, elongate, blackish brown when mature, smooth, thick wall, germ pore distinctive. Basidia 26.4–33.8 × 9.6–12.1 μm, 4-spored, smooth, hyaline. Cheilocystidia 18.6–30.4 × 3.5–8.2 μm, cylindrical or narrowly clavate, flexuose, occasionally with an inflated apex, hyaline and yellowish-brown, smooth. Pleurocystidia absent. Cuticle composed of large vesicles, pileocystidia 23.3–46.5 × 11.5–28.1 μm, spheropedunculate, hyaline, occasionally yellowish-brown. Caulocystidia 17.7–60.2 × 3.4–7.4 μm, cylindrical or narrowly clavate, flexuose, hyaline, occasionally light brown, smooth.

Habitat.

Grows on fertile soil as pastures, grasslands, and forests.

Psilocybin-producing.

Nonproducing (ZRL20170604, see Suppl. material 1: fig. S3).

Notes.

Panaeolus parvisporus is a recently proposed species based on P. papilionaceus var. parvisporus from the P. papilionaceus complex (Voto and Angelini 2024). Five samples from China share identical ITS sequences with two European samples of P. parvisporus. However, they differ in basidiospores, with our samples having larger basidiospores.

Specimens examined.

China. Inner Mongolia Autonomous Region: Hulunbeier, Xinbaerhuzuo County, 49°45'20"N, 120°12'9"E, alt. 510 m, 26 August 2017, Zhilin Ling, ZRL20170602, ZRL20170603, ZRL20170604, ZRL20170654; Inner Mongolia Autonomous Region, Chaihe Wildlife Nature Reserve, Zhalantun City, 25 August 2017, Zhilin Ling, ZRL20170634; Ningxia Hui Autonomous Region: 11 September 1995, Xiaolan Mao, Cangkuan Wang, HMAS69762.

. Panaeolus xiaolanii

M.Q. He & R.L. Zhao sp. nov.

B9A82FC5-C57B-512A-B722-D0C2E2039F4B

852930

Fig. 17

Figure 17.

Figure 17.

Panaeolus xiaolanii. a–c basidiomes in the field; d basidiospores; e basidia; f cheilocystidia; g caulocystidia. Scale bars: 10 μm (d); 20 μm (e, f, g).

Etymology.

xiaolanii is in honor of the Chinese mycologist Xiao-Lan Mao, who made a great contribution to the macrofungal research in China.

Diagnosis.

Panaeolus xiaolanii has small basidiomes with gray, hygrophanous pileus, limoniform basidiospores, and cylindrical, flexuose cheilocystidia.

Holotype.

CHINA. Xizang Autonomous Region: Shigatse Municipality, Yadong County, Xiayadong Village, Boluoka grassland, 27.22.8°N, 88.58.25°E, alt. 2872 m, 22 July 2022, Mao-Qiang He, HMAS287493 (ZRL20220031).

Description.

Pileus 11–38 mm in diam., conical to broadly conical, surface dry, smooth, hygrophanous, color variable, from gray (pantone 427 c), grayish yellow (pantone 7536 c) to grayish black (pantone 412 c), usually paler at edge, some with crenulate margin, margin usually covered by white veil remnants. Lamellae adnate, close, broad, mottled grayish first then becoming blackish when mature, entire, with a white edge. Stipe equal, hollow, 34–130 mm long, 1–3 mm thick, always the same color as pileus, gray to black, dark purple, paler above, smooth, pruinose especially on the side close to the cap, base getting darker when touched or bruised and occasionally with whitish mycelium.

Basidiospores 13.8–16.3 × 10.7–12.0 μm, [x = 15.3 ± 0.7 × 11.4 ± 0.3, Q = 1.2–1.5, Qm = 1.3 ± 0.1, n = 20], limoniform, blackish brown when mature, smooth, thick wall, protruding germ pore. Basidia 19.1–26.9 × 12.9–15.8 μm, 4-spored, smooth, hyaline. Cheilocystidia 23.3–32.4 × 3.9–7.4 μm, cylindrical or narrowly clavate, flexuose, hyaline, smooth. Pleurocystidia absent. Cuticle composed of large vesicles, pileocystidia not observed. Caulocystidia 31.4–55.7 × 5.5–9.6 μm, cylindrical or narrowly clavate, flexuose, hyaline and light brown, smooth.

Habitat.

Grows in pastures, on dung of horses and cows.

Psilocybin-producing.

Nonproducing (ZRL20220031, see Suppl. material 1: fig. S5).

Notes.

Compared with other phylogenetically closely related species, P. xiaolanii can be distinguished from P. papilionaceus in the field by its more conical and darker pileus. Additionally, the two species differ in basidiospores, with P. papilionaceus having ellipsoid basidiospores, whereas P. xiaolanii has limoniform basidiospores. It is difficult to separate P. xiaolanii from P. parvisporus in the field. A relatively distinguishable difference is the larger basidiospores of P. xiaolanii.

Other specimen examined.

China. Jilin Province: Yanbian Korean Autonomous Prefecture, Longjin City, Xianfeng National Forestry Park, 23 July 2016, ZRL20160575; Xizang Autonomous Region: Shigatse Municipality, Yadong County, Xiayadong village, Boluoka grassland, 27.22.8°N, 88.58.25°E, alt. 2872 m, 22 July 2022, collected by Mao-Qiang He, ZRL20220039, ZRL20220044, ZRL20220154, ZRL20220155; Renqinggang, 27.25.20°N, 88.55.6°E, alt. 3254, 23 July 2022, Mao-Qiang He, ZRL20220360, ZRL20220381; Dinggyê County, Chentang Town, 27.52.17°N, 87.25.18°E, alt. 2600 m, 30 July 2022, Mao-Qiang He, ZRL20220451, ZRL20220452; Gyirong County, Jilonggou, 28.24.35°N, 85.18.54°E, alt. 2935 m, 1st August 2022, Rui-Lin Zhao, ZRL20220560; Chongse, 28.22.39°N, 85.19.40°E, alt. 2780 m, 2nd August 2022, Bin Cao, ZRL20220697.

Discussion

Taxonomic system and species diversity of Galeropsidaceae

In this study, based on phylogenomic and multigene phylogenetic analyses, divergence time estimation, and morphological characteristics, the panaeo-clade is further demonstrated to be a distinct family separate from Bolbitiaceae, as assumed in previous studies (Kalichman et al. 2020). Additional evidence from this study includes the following: first, multigene phylogenetic analyses with expanded taxon sampling confirm the monophyly of the panaeo-clade and its sister relationship to Bolbitiaceae within Agaricineae; second, the divergence time of the panaeo-clade (87 Myr) closely aligns with that of other families in Agaricineae (59–130 Myr); third, the combination of morphological characteristics, including a black spore print and variegated lamellae, distinguishes the panaeo-clade from Bolbitiaceae and other families in Agaricineae. The type species of Galeropsidaceae, Galeropsis desertorum Velen. & Dvořák, is found to be a member of the panaeo-clade (Malysheva et al. 2019). Consequently, this clade should be named Galeropsidaceae, which has nomenclatural priority (Kalichman et al. 2020).

Five main clades are revealed within Galeropsidaceae (clades A–E; see Fig. 3). Four main clades are found within Panaeolus, three of which correspond to the three subgenera, namely clade A (subg. Panaeolina), clade B (subg. Panaeolus), and clade C (subg. Bresadolomyces). Clade D is represented by a single specimen from the Dominican Republic (ANGE1393: P. sylvaticus), which does not cluster with any of the other clades in Panaeolus. Clade E represents Staktophyllus, a genus separated from Panaeolus, currently represented only by S. guttulatus. Panaeolopsis has previously been considered a genus within Galeropsidaceae (Kalichman et al. 2020). In this study, Panaeolopsis nirimbii (PERTH7680368) is clustered in subclade A2 within subg. Panaeolina (see Fig. 3), which agrees with the proposal to synonymize Panaeolopsis under Panaeolus (Angelini and Voto 2023). Crucispora was established to accommodate species with Panaeolus-like basidiomes but distinctive cruciform-rhomboid basidiospores. Panaeolina rhombisperma was therefore transferred to Crucispora based on its cruciform-rhomboid basidiospores (Horak 1980). According to the phylogenetic results, C. rhombisperma is grouped together with members of subg. Bresadolomyces and is thus proposed as a synonym of Panaeolus.

The circumscription of subgenera in Panaeolus is mainly based on phylogenetic evidence. There is no known single morphological synapomorphy that unites the subgenera of Panaeolus. For example, basidiospore morphology (shape and ornamentation) has long been treated as a diagnostic character between genera in the taxonomic system of Panaeolus (Singer 1986; Gerhardt 1996). Accordingly, Panaeolina was proposed to include species with verrucose basidiospores, and Crucispora was proposed for species with cruciform-rhomboid basidiospores. However, at present, only P. foenisecii has been observed to possess verrucose basidiospores and is nested in subclade A2, with a sister relationship to P. subfoenisecii, which has smooth basidiospores. Conversely, species with cruciform-rhomboid basidiospores are nested within subg. Bresadolomyces. Most species of Panaeolus have smooth basidiospores. Furthermore, the Anellaria-like morphotype, characterized by robust, pale-colored basidiomes with glabrous pilei, occurs in phylogenetically distinct lineages, such as P. semiovatus and P. antillarum in subclade A3 and P. medogensis in subclade A1.

Galeropsidaceae species are characterized by small- to medium-sized basidiomes, a black spore print, and variegated lamellae, with many coprophilous species. These morphological characters generally distinguish them from other families in Agaricineae. However, field identification at the species level remains challenging because of high morphological plasticity. For example, six samples of P. variabilicolor collected from the Xizang Autonomous Region exhibited four different pileus morphotypes: reddish brown and convex (Fig. 12a), grayish brown and campanulate (Fig. 12b), grayish brown to black and conic (Fig. 12c, e), and reddish brown and conic (Fig. 12d). These variations in pileus morphology may be related to different habitats. ITS is widely used as a DNA barcode for Galeropsidaceae; however, in this study, ITS was found to be unsuitable for reliable species identification within Galeropsidaceae. In particular, for subg. Panaeolus, ITS shows much lower polymorphism than commonly used protein-coding genes (rpb1, rpb2, and tef1). For example, P. xiaolanii and P. parvisporus share identical ITS sequences but differ by more than 10 nucleotide positions in tef1.

Based on records from previous studies and the new species identified in this study from China, there are currently 88 accepted species of Galeropsidaceae worldwide (Voto and Angelini 2022; Asif et al. 2023; Strauss et al. 2023). Over the past 10 years, six new species have been described worldwide, but only three of these were introduced with molecular data. Our phylogenetic analyses revealed many unnamed samples occupying distinct positions within Galeropsidaceae, particularly in subclades B1 and C1. This suggests that species diversity in Galeropsidaceae remains underexplored and that further sampling combined with molecular phylogenetic analyses is needed. It can be speculated that more than 100 species of Galeropsidaceae may exist worldwide.

The evolution of coprophilous and psilocybin-producing traits of Galeropsidaceae

Galeropsidaceae diverged approximately 87 Myr during the Cretaceous period, which aligns with the divergence times of most families in Agaricales (59–130 Myr; see Fig. 1). Both genera within Galeropsidaceae originated during the Cretaceous. Staktophyllus occupies the basal position within Galeropsidaceae, suggesting that Galeropsidaceae may have originated from a non-coprophilous ancestor, as S. guttulatus is mainly found on sandy soil (Bresadola 1883; Seidmohammadi et al. 2019). It can therefore be inferred that the coprophilous lifestyle is not homologous across the subgenera of Panaeolus. Each subgenus appears to have followed an independent evolutionary trajectory with respect to substrate preference. Ruminants and horses are thought to have played key roles in the evolution of coprophilous fungi (Halbwachs and Bässler 2020; Zhu and Bau 2024). The diversification of ruminants and horses occurred during a period similar to that of speciation in most Galeropsidaceae species. For example, most subfamilies of ruminants and genera of horses diverged during the Miocene, which coincides with the divergence of many Galeropsidaceae species (MacFadden 2005; Chen et al. 2019; Fig. 4 in this study). Additionally, at least two gasteromycetation events were inferred within Galeropsidaceae. One event occurred at least 2.6 Myr ago in subg. Panaeolina, represented by P. plantaginiformis. Another event occurred at least 7.4 Myr ago in subg. Panaeolus, represented by P. desertorum.

Two species, P. subfoenisecii and P. cinctulus, were confirmed to produce psilocybin in this study. Another species, P. cyanescens, is well known for psilocybin production, but psilocybin was not detected in this study, possibly due to the age of the samples examined (HMAS63187, collected 29 years ago), although psilocybin has been detected in 50-year-old Psilocybe samples (Bradshaw et al. 2022). Previous genomic and chemical studies have confirmed the psilocybin-producing properties of P. cyanescens (Stijve 1992; Reynolds et al. 2018). These three species are distributed across two lineages within Galeropsidaceae, namely subclades A2 and C1, both of which diverged around 30 Myr ago. Notably, within subclade A2, P. subfoenisecii and P. foenisecii are sister species, yet P. foenisecii lacks the psilocybin-producing trait. Previous studies have suggested that horizontal gene transfer between genera is an important mechanism driving the diversity of hallucinogenic mushrooms in Agaricales (Reynolds et al. 2018; Bradshaw et al. 2023). Whether horizontal gene transfer occurred between these sister species remains an intriguing question for future study.

Supplementary Material

XML Treatment for Galeropsidaceae
XML Treatment for Panaeolus
XML Treatment for Panaeolus subg. Bresadolomyces
XML Treatment for Panaeolus cyanescens
XML Treatment for Panaeolus subg. Panaeolina
XML Treatment for Panaeolus antillarum
XML Treatment for Panaeolus cinctulus
XML Treatment for Panaeolus foenisecii
XML Treatment for Panaeolus grandis
XML Treatment for Panaeolus limoniformisporus
XML Treatment for Panaeolus medogensis
XML Treatment for Panaeolus nigrescens
XML Treatment for Panaeolus pallidus
XML Treatment for Panaeolus semiovatus
XML Treatment for Panaeolus subfoenisecii
XML Treatment for Panaeolus variabilicolor
XML Treatment for Panaeolus subg. Panaeolus
XML Treatment for Panaeolus papilionaceus
XML Treatment for Panaeolus parvisporus
XML Treatment for Panaeolus xiaolanii

Acknowledgments

We thank Dr. Erwei Li from the Institute of Microbiology, Chinese Academy of Sciences, for assistance with HPLC–MS data collection. Luis Parra and Cvetomir M. Denchev are thanked for their help with nomenclature. Konstanze Bensch is thanked for assistance with species naming. Anonymous reviewers are thanked for their constructive comments, which improved the manuscript.

Citation

He M-Q, Yang W-Q, Phurbu D, Liu F, Li J-X, Cao B, Zhao R-L (2026) Systematic study of Panaeolus (Agaricales, Galeropsidaceae) sensu lato and psilocybin-producing traits of species from China. IMA Fungus 17: e167329. https://doi.org/10.3897/imafungus.17.167329

Funding Statement

National Natural Science Foundation of China (32100011, 31961143010), the Central Guidance Local Science and Technology Development Special Project of Sichuan Province (2024ZYD0128), Edible Fungus Innovation Team of Sichuan Province (sccxtd-2024-07). Biological Resources Programme, Chinese Academy of Sciences (KFJ-BRP-009), Projects of Science and Technology Programs of Tibet (Project ID: XZ202202YD0031C), Survey of Wildlife Resources in Key Areas of Tibet (ZL202203601).

Additional information

Conflict of interest

The authors have declared that no competing interests exist.

Ethical statement

No ethical statement was reported.

Use of AI

No use of AI was reported.

Adherence to national and international regulations

All the fungal strains used in this study have been legally obtained, respecting the Convention on Biological Diversity (Rio Convention).

Funding

This work was supported by the National Natural Science Foundation of China (32100011, 31961143010), the Central Guidance Local Science and Technology Development Special Project of Sichuan Province (2024ZYD0128), the Edible Fungus Innovation Team of Sichuan Province (sccxtd-2024-07), the Science and Technology Projects of the Xizang Autonomous Region, China (XZ202501JD0013), the Biological Resources Programme, Chinese Academy of Sciences (KFJ-BRP-009), the Science and Technology Programs of Tibet (Project ID: XZ202202YD0031C), and the Survey of Wildlife Resources in Key Areas of Tibet (ZL202203601).

Author contributions

Mao-Qiang He and Rui-Lin Zhao conceived and conceptualised the study; all authors carried out sample collection; Mao-Qiang He, Wen-Qiang Yang, Dorji Phurbu performed experiments; Mao-Qiang He, Fei Liu, Jia-Xin Li, Bin Cao performed data analysis; Mao-Qiang He and Rui-Lin Zhao drafted the manuscript; all authors read, edited, and approved the final version of the manuscript.

Author ORCIDs

Mao-Qiang He https://orcid.org/0000-0002-9300-7484

Fei Liu https://orcid.org/0000-0003-1175-4070

Jia-Xin Li https://orcid.org/0000-0002-6434-3729

Rui-Lin Zhao https://orcid.org/0000-0001-8129-9339

Data availability

All of the data that support the findings of this study are available in the main text or Supplementary Information.

Supplementary materials

Supplementary material 1

HPLC-MS chromatograms

This dataset is made available under the Open Database License (http://opendatacommons.org/licenses/odbl/1.0/). The Open Database License (ODbL) is a license agreement intended to allow users to freely share, modify, and use this Dataset while maintaining this same freedom for others, provided that the original source and author(s) are credited.

Mao-Qiang He, Wen-Qiang Yang, Dorji Phurbu, Fei Liu, Jia-Xin Li, Bin Cao, Rui-Lin Zhao

Data type

zip

Supplementary material 2

Agaricineae sixgene

This dataset is made available under the Open Database License (http://opendatacommons.org/licenses/odbl/1.0/). The Open Database License (ODbL) is a license agreement intended to allow users to freely share, modify, and use this Dataset while maintaining this same freedom for others, provided that the original source and author(s) are credited.

Mao-Qiang He, Wen-Qiang Yang, Dorji Phurbu, Fei Liu, Jia-Xin Li, Bin Cao, Rui-Lin Zhao

Data type

phy

Supplementary material 3

Galeropsidaceae ITS

This dataset is made available under the Open Database License (http://opendatacommons.org/licenses/odbl/1.0/). The Open Database License (ODbL) is a license agreement intended to allow users to freely share, modify, and use this Dataset while maintaining this same freedom for others, provided that the original source and author(s) are credited.

Mao-Qiang He, Wen-Qiang Yang, Dorji Phurbu, Fei Liu, Jia-Xin Li, Bin Cao, Rui-Lin Zhao

Data type

fas

Supplementary material 4

Galeropsidaceae LSU

This dataset is made available under the Open Database License (http://opendatacommons.org/licenses/odbl/1.0/). The Open Database License (ODbL) is a license agreement intended to allow users to freely share, modify, and use this Dataset while maintaining this same freedom for others, provided that the original source and author(s) are credited.

Mao-Qiang He, Wen-Qiang Yang, Dorji Phurbu, Fei Liu, Jia-Xin Li, Bin Cao, Rui-Lin Zhao

Data type

fas

Supplementary material 5

Galeropsidaceae rpb1

This dataset is made available under the Open Database License (http://opendatacommons.org/licenses/odbl/1.0/). The Open Database License (ODbL) is a license agreement intended to allow users to freely share, modify, and use this Dataset while maintaining this same freedom for others, provided that the original source and author(s) are credited.

Mao-Qiang He, Wen-Qiang Yang, Dorji Phurbu, Fei Liu, Jia-Xin Li, Bin Cao, Rui-Lin Zhao

Data type

fas

Supplementary material 6

Galeropsidaceae rpb2

This dataset is made available under the Open Database License (http://opendatacommons.org/licenses/odbl/1.0/). The Open Database License (ODbL) is a license agreement intended to allow users to freely share, modify, and use this Dataset while maintaining this same freedom for others, provided that the original source and author(s) are credited.

Mao-Qiang He, Wen-Qiang Yang, Dorji Phurbu, Fei Liu, Jia-Xin Li, Bin Cao, Rui-Lin Zhao

Data type

fas

Supplementary material 7

Galeropsidaceae SSU

This dataset is made available under the Open Database License (http://opendatacommons.org/licenses/odbl/1.0/). The Open Database License (ODbL) is a license agreement intended to allow users to freely share, modify, and use this Dataset while maintaining this same freedom for others, provided that the original source and author(s) are credited.

Mao-Qiang He, Wen-Qiang Yang, Dorji Phurbu, Fei Liu, Jia-Xin Li, Bin Cao, Rui-Lin Zhao

Data type

fas

Supplementary material 8

Galeropsidaceae tef1

This dataset is made available under the Open Database License (http://opendatacommons.org/licenses/odbl/1.0/). The Open Database License (ODbL) is a license agreement intended to allow users to freely share, modify, and use this Dataset while maintaining this same freedom for others, provided that the original source and author(s) are credited.

Mao-Qiang He, Wen-Qiang Yang, Dorji Phurbu, Fei Liu, Jia-Xin Li, Bin Cao, Rui-Lin Zhao

Data type

fas

Supplementary material 9

Agaricineae genomic data

This dataset is made available under the Open Database License (http://opendatacommons.org/licenses/odbl/1.0/). The Open Database License (ODbL) is a license agreement intended to allow users to freely share, modify, and use this Dataset while maintaining this same freedom for others, provided that the original source and author(s) are credited.

Mao-Qiang He, Wen-Qiang Yang, Dorji Phurbu, Fei Liu, Jia-Xin Li, Bin Cao, Rui-Lin Zhao

Data type

zip

References

  1. Al-Salihi SA, Dao TT, et al. (2019) The biogenetic origin of the biologically active naematolin of Hypholoma species involves an unusual sesquiterpene synthase. Molecular Biotechnology 61(10): 754–762. 10.1007/s12033-019-00199-x [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. Alvarado P, Manjón JL, et al. (2010) Tubariomyces, a new genus of Inocybaceae from the Mediterranean region. Mycologia 102(6): 1389–1397. 10.3852/10-041 [DOI] [PubMed] [Google Scholar]
  3. Ángeles-Argáiz RE, Aguirre-Beltrán LF, et al. (2024) Assembly collapsing versus heterozygosity oversizing: detection of homokaryotic and heterokaryotic Laccaria trichodermophora strains by hybrid genome assembly. Microbial Genomics 10(3): 001218. 10.1099/mgen.0.001218 [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Angelini C, Voto P. (2019) First record of Panaeolus sylvaticus in the Dominican Republic and notes on Panaeolus and Panaeolopsis. Edinburgh Journal of Botany 76(2): 304. [Google Scholar]
  5. Asif M, Firdous Q, et al. (2023) Molecular and morphological studies reveal a new species of Panaeolus (Agaricales, Basidiomycota) from Punjab, Pakistan. European Journal of Taxonomy 888: 77–96. 10.5852/ejt.2023.888.2215 [DOI] [Google Scholar]
  6. Awan AR, Winter JM, et al. (2018) Convergent evolution of psilocybin biosynthesis by psychedelic mushrooms. bioRxiv, 374199. 10.1101/374199 [DOI]
  7. Bahram M, Vanderpool D, et al. (2018) The genome and microbiome of a dikaryotic fungus (Inocybe terrigena, Inocybaceae) revealed by metagenomics. Environmental Microbiology Reports 10(2): 155–166. 10.1111/1758-2229.12612 [DOI] [PubMed] [Google Scholar]
  8. Banks AM, Barker GL, et al. (2017) Draft genome sequence of the coprinoid mushroom Coprinopsis strossmayeri. Genome Announcements 5(14): 10–128. 10.1128/genomeA.00044-17 [DOI] [PMC free article] [PubMed] [Google Scholar]
  9. Bodensteiner P, Binder M, et al. (2004) Phylogenetic relationships of cyphelloid homobasidiomycetes. Molecular Phylogenetics and Evolution 33(2): 501–515. 10.1016/j.ympev.2004.06.007 [DOI] [PubMed] [Google Scholar]
  10. Bouckaert R, Heled J, et al. (2014) BEAST 2: a software platform for Bayesian evolutionary analysis. PLoS Computational Biology 10(4): 1003537. 10.1371/journal.pcbi.1003537 [DOI] [PMC free article] [PubMed] [Google Scholar]
  11. Bradshaw AJ, Backman TA, et al. (2022) DNA authentication and chemical analysis of Psilocybe mushrooms reveal widespread misdeterminations in fungaria and inconsistencies in metabolites. Applied and Environmental Microbiology 88(24): e01498-22. 10.1128/aem.01498-22 [DOI] [PMC free article] [PubMed]
  12. Bradshaw AJ, Ramírez-Cruz V, et al. (2023) Phylogenomics of the psychoactive mushroom genus Psilocybe and evolution of the psilocybin biosynthetic gene cluster. Proceedings of the National Academy of Sciences 121(3): e2311245121. 10.1073/pnas.2311245121 [DOI] [PMC free article] [PubMed]
  13. Bresadola G. (1883) Fungi tridentini. FungiTridentini 1(3): 27–42. [Google Scholar]
  14. Bresadola G. (1912) Basidiomycetes philippinenses. Series II. Hedwigia 53(1–2): 46–80. [Google Scholar]
  15. Chen L, Qiu Q, et al. (2019) Large-scale ruminant genome sequencing provides insights into their evolution and distinct traits. Science 364(6446): eaav6202. 10.1126/science.aav6202 [DOI] [PubMed]
  16. Chen X, Wei Y, et al. (2024) Telomere-to-telomere haplotype-resolved genomes of Agrocybe chaxingu reveals unique genetic features and developmental insights. Journal of Fungi 10(9): 602. 10.3390/jof10090602 [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. Cho HJ, Park MS, et al. (2018) A systematic revision of the ectomycorrhizal genus Laccaria from Korea. Mycologia 110(5): 948–961. 10.1080/00275514.2018.1507542 [DOI] [PubMed] [Google Scholar]
  18. Chou WN, Yang BH, et al. (2021) Crucispora rhombisperma newly recorded in Taiwan. Fungal Science 36: 33–36. [Google Scholar]
  19. Conlon BH, Gostinčar C, et al. (2021) Genome reduction and relaxed selection is associated with the transition to symbiosis in the basidiomycete genus Podaxis. iScience 24(6): 102536. 10.1016/j.isci.2021.102680 [DOI] [PMC free article] [PubMed] [Google Scholar]
  20. Cui YY, Cai Q, et al. (2018) The family Amanitaceae: molecular phylogeny, higher-rank taxonomy and the species in China. Fungal Diversity 91(1): 5–230. 10.1007/s13225-018-0405-9 [DOI] [Google Scholar]
  21. De D Perry BA. (2017) Panaeolus antillarum (Basidiomycota, Psathyrellaceae) from wild elephant dung in Thailand. Current Research in Environmental & Applied Mycology 7(4): 275–281. 10.5943/cream/7/4/4 [DOI] [Google Scholar]
  22. Dentinger BT, Gaya E, et al. (2016) Tales from the crypt: genome mining from fungarium specimens improves resolution of the mushroom tree of life. Biological Journal of the Linnean Society 117(1): 11–32. 10.1111/bij.12553 [DOI] [Google Scholar]
  23. Edgar RC. (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Research 32: 1792–1797. 10.1093/nar/gkh340 [DOI] [PMC free article] [PubMed] [Google Scholar]
  24. Floudas D, Bentzer J, et al. (2020) Uncovering the hidden diversity of litter-decomposition mechanisms in mushroom-forming fungi. The ISME Journal 14(8): 2046–2059. 10.1038/s41396-020-0667-6 [DOI] [PMC free article] [PubMed] [Google Scholar]
  25. Fricke J, Blei F, Hoffmeister D. (2017) Enzymatic synthesis of psilocybin. Angewandte Chemie International Edition 56(40): 12352–12355. 10.1002/anie.201705489 [DOI] [PubMed] [Google Scholar]
  26. Garnica S, Weiß M, et al. (2005) A framework for a phylogenetic classification in the genus Cortinarius (Basidiomycota, Agaricales) derived from morphological and molecular data. Botany 83(11): 1457–1477. 10.1139/b05-107 [DOI] [Google Scholar]
  27. Garnica S, Weiss M, et al. (2007) Reconstructing the evolution of agarics from nuclear gene sequences and basidiospore ultrastructure. Mycological Research 111(9): 1019–1029. 10.1016/j.mycres.2007.03.019 [DOI] [PubMed] [Google Scholar]
  28. Gotvaldová K, Borovička J, et al. (2022) Extensive collection of psychotropic mushrooms with determination of their tryptamine alkaloids. International Journal of Molecular Sciences 23(22): 14068. 10.3390/ijms232214068 [DOI] [PMC free article] [PubMed] [Google Scholar]
  29. Guzmán G, Allen JW, Gartz J. (1998) A worldwide geographical distribution of the neurotropic fungi, an analysis and discussion. Annali del Museo Civico di Rovereto 14: 189–280. [Google Scholar]
  30. Halama M, Witkowska D, et al. (2014) An adventive Panaeolus antillarum in Poland (Basidiomycota, Agaricales) with notes on its taxonomy, geographical distribution, and ecology. Cryptogamie, Mycologie 35: 3–22. 10.7872/crym.v35.iss1.2014.3 [DOI] [Google Scholar]
  31. Halbwachs H, Bässler C. (2020) No bull: Dung-dwelling mushrooms show reproductive trait syndromes different from their non-coprophilous allies. Mycological Progress 19(8): 817–824. 10.1007/s11557-020-01604-5 [DOI] [Google Scholar]
  32. Hall T. (2007) BioEdit v7. Ibis Biosciences, Carlsbad. http://www.mbio.ncsu.edu/BioEdit/BioEdit.html
  33. Harrower E, Ammirati JF, et al. (2011) Cortinarius species diversity in British Columbia and molecular phylogenetic comparison with European specimen sequences. Botany 89(11): 799–810. 10.1139/b11-065 [DOI] [Google Scholar]
  34. Hawksworth DL, Kirk PM, et al. (1995) Ainsworth & Bisby’s Dictionary of the Fungi, 8th edn. CAB International, Wallingford.
  35. He MQ, Wang MQ, et al. (2022) Potential benefits and harms: A review of poisonous mushrooms in the world. Fungal Biology Reviews 42: 56–68. 10.1016/j.fbr.2022.06.002 [DOI] [Google Scholar]
  36. He MQ, Zhao RL, et al. (2019) Notes, outline and divergence times of Basidiomycota. Fungal Diversity 99: 105–367. 10.1007/s13225-019-00435-4 [DOI] [Google Scholar]
  37. He Y, Liu B, et al. (2025) Whole-genome sequencing and fine map analysis of Pholiota nameko. Journal of Fungi 11(2): 112. 10.3390/jof11020112 [DOI] [PMC free article] [PubMed] [Google Scholar]
  38. Hopple Jr JS, Vilgalys R. (1999) Phylogenetic relationships in the mushroom genus Coprinus and dark-spored allies based on sequence data from the nuclear gene coding for the large ribosomal subunit RNA: divergent domains, outgroups, and monophyly. Molecular Phylogenetics and Evolution 13(1): 1–9. 10.1006/mpev.1999.0634 [DOI] [PubMed] [Google Scholar]
  39. Horak E. (1980) New and remarkable hymenomycetes from tropical forests in Indonesia (Java) and Australasia. Sydowia 33: 39–63. [Google Scholar]
  40. Hu Y, Mortimer PE, et al. (2020) A new species of Panaeolus (Agaricales, Basidiomycota) from Yunnan, Southwest China. Phytotaxa 434(1): 22–34. 10.11646/phytotaxa.434.1.3 [DOI] [Google Scholar]
  41. Kalichman J, Kirk PM, Matheny PB. (2020) A compendium of generic names of agarics and Agaricales. Taxon 69(3): 425–447. 10.1002/tax.12240 [DOI] [Google Scholar]
  42. Karsten PA. (1879) Rysslands, Finlands och den Skandinaviska halföns Hattsvampar. Förra Delen: Skifsvampar. Bidrag till Kännedom av Finlands Natur och Folk 32: 1–571. [Google Scholar]
  43. Katoh K, Standley DM. (2013) MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Molecular Biology and Evolution 30: 772–780. 10.1093/molbev/mst010 [DOI] [PMC free article] [PubMed] [Google Scholar]
  44. Kirk PM, Cannon P, et al. (2008) Ainsworth & Bisby’s Dictionary of the Fungi, 10th edn. CAB International, Wallingford. 10.1079/9780851998268.0000 [DOI]
  45. Kohler A, Kuo A, et al. (2015) Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists. Nature Genetics 47(4): 410–415. 10.1038/ng.3223 [DOI] [PubMed] [Google Scholar]
  46. Kropp BR, Matheny PB, Hutchison LJ. (2013) Inocybe section Rimosae in Utah: phylogenetic affinities and new species. Mycologia 105(3): 728–747. 10.3852/12-185 [DOI] [PubMed] [Google Scholar]
  47. Krüger D, Gargas A. (2008) Secondary structure of ITS2 rRNA provides taxonomic characters for systematic studies—a case in Lycoperdaceae (Basidiomycota). Mycological Research 112(3): 316–330. 10.1016/j.mycres.2007.10.019 [DOI] [PubMed] [Google Scholar]
  48. Largent DL. (1986) How to Identify Mushrooms to Genus, vol. 1–5. Mad River Press, Eureka.
  49. Li H, Wu S, et al. (2018) The genome sequences of 90 mushrooms. Scientific Reports 8(1): 9982. 10.1038/s41598-018-28303-2 [DOI] [PMC free article] [PubMed] [Google Scholar]
  50. Li W, Shang J, et al. (2024) Whole-genome sequence analysis of Flammulina filiformis and functional validation of Gad, a key gene for γ-aminobutyric acid synthesis. Journal of Fungi 10(12): 862. 10.3390/jof10120862 [DOI] [PMC free article] [PubMed] [Google Scholar]
  51. Li Y, Steenwyk JL, et al. (2021) A genome-scale phylogeny of the kingdom Fungi. Current Biology 31(8): 1653–1665. 10.1016/j.cub.2021.01.074 [DOI] [PMC free article] [PubMed] [Google Scholar]
  52. Liang Y, Lu D, et al. (2020) Genome assembly and pathway analysis of edible mushroom Agrocybe cylindracea. Genomics, Proteomics & Bioinformatics 18(3): 341–351. 10.1016/j.gpb.2018.10.009 [DOI] [PMC free article] [PubMed] [Google Scholar]
  53. Liimatainen K, Kim JT, et al. (2022) Taming the beast: a revised classification of Cortinariaceae based on genomic data. Fungal Diversity 112(1): 89–170. 10.1007/s13225-022-00499-9 [DOI] [Google Scholar]
  54. Liimatainen K, Niskanen T, et al. (2020) Cortinarius section Thaumasti in South American Nothofagaceae forests. Mycologia 112(2): 329–341. 10.1080/00275514.2019.1689763 [DOI] [PubMed] [Google Scholar]
  55. Liu Z, Lu H, et al. (2021) The genomic and transcriptomic analyses of Floccularia luteovirens, a rare edible fungus in the Qinghai–Tibet Plateau, provide insights into the taxonomy placement and fruiting body formation. Journal of Fungi 7(11): 887. 10.3390/jof7110887 [DOI] [PMC free article] [PubMed] [Google Scholar]
  56. Lüli Y, Cai Q, et al. (2019) Genome of lethal Lepiota venenata and insights into the evolution of toxin-biosynthetic genes. BMC Genomics 20(1): 198. 10.1186/s12864-019-5575-7 [DOI] [PMC free article] [PubMed] [Google Scholar]
  57. MacFadden BJ. (2005) Fossil horses—evidence for evolution. Science 307(5716): 1728–1730. 10.1126/science.1105458 [DOI] [PubMed] [Google Scholar]
  58. Maire R. (1933) Fungi Catalaunici: Contributions à l’étude de la Flore Mycologique de la Catalogne. Publicaciones del Junta de Ciencias Naturales Barcelona, Sèr. Botànica 15(2): 1–120. [Google Scholar]
  59. Malysheva E, Moreno G, et al. (2019) The secotioid genus Galeropsis (Agaricomycetes, Basidiomycota): a real taxonomic unit or ecological phenomenon? Mycological Progress 18: 805–831. 10.1007/s11557-019-01490-6 [DOI]
  60. Manni M, Berkeley MR, et al. (2021) BUSCO: Assessing Genomic Data Quality and Beyond. Current Protocols 1(12): e323. 10.1002/cpz1.323 [DOI] [PubMed]
  61. Martin F, Aerts A, et al. (2008) The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis. Nature 452(7183): 88–92. 10.1038/nature06556 [DOI] [PubMed] [Google Scholar]
  62. Maruyama T, Kawahara N, et al. (2006) Phylogenetic relationship of psychoactive fungi based on rRNA gene for a large subunit and their identification using the TaqMan assay (II). Forensic Science International 163(1–2): 51–58. 10.1016/j.forsciint.2004.10.028 [DOI] [PubMed] [Google Scholar]
  63. Matheny PB. (2005) Improving phylogenetic inference of mushrooms with RPB1 and RPB2 nucleotide sequences (Inocybe; Agaricales). Molecular Phylogenetics and Evolution 35(1): 1–20. 10.1016/j.ympev.2004.11.014 [DOI] [PubMed] [Google Scholar]
  64. Matheny PB, Aime MC, et al. (2009) Out of the Palaeotropics? Historical biogeography and diversification of the cosmopolitan ectomycorrhizal mushroom family Inocybaceae. Journal of Biogeography 36(4): 577–592. 10.1111/j.1365-2699.2008.02055.x [DOI] [Google Scholar]
  65. Matheny PB, Bougher NL. (2006) The new genus Auritella from Africa and Australia (Inocybaceae, Agaricales): molecular systematics, taxonomy and historical biogeography. Mycological Progress 5(1): 2–17. 10.1007/s11557-005-0001-8 [DOI] [Google Scholar]
  66. Matheny PB, Curtis JM, et al. (2006) Major clades of Agaricales: a multilocus phylogenetic overview. Mycologia 98(6): 982–995. 10.1080/15572536.2006.11832627 [DOI] [PubMed] [Google Scholar]
  67. Matheny PB, Kudzma LV. (2019) New species of Inocybe (Inocybaceae) from eastern North America. Journal of the Torrey Botanical Society 146(3): 213–235. 10.3159/TORREY-D-18-00060.1 [DOI] [Google Scholar]
  68. Matheny PB, Liu YJ, et al. (2002) Using RPB1 sequences to improve phylogenetic inference among mushrooms (Inocybe, Agaricales). American Journal of Botany 89(4): 688–698. 10.3732/ajb.89.4.688 [DOI] [PubMed] [Google Scholar]
  69. Matheny PB, Moreau PA, et al. (2015) Crassisporium and Romagnesiella: two new genera of dark-spored Agaricales. Systematics and Biodiversity 13(1): 28–41. 10.1080/14772000.2014.967823 [DOI] [Google Scholar]
  70. Matheny PB, Vellinga EC, et al. (2007) Taxonomy of displaced species of Tubaria. Mycologia 99(4): 569–685. 10.1080/15572536.2007.11832551 [DOI] [PubMed] [Google Scholar]
  71. McKernan K, Kane L, et al. (2021) A whole genome atlas of 81 Psilocybe genomes as a resource for psilocybin production. F1000Research 10: 961. 10.12688/f1000research.55301.2 [DOI]
  72. Mesny F, Miyauchi S, et al. (2021) Genetic determinants of endophytism in the Arabidopsis root mycobiome. Nature Communications 12(1): 7227. 10.1038/s41467-021-27479-y [DOI] [PMC free article] [PubMed] [Google Scholar]
  73. Minh BQ, Schmidt HA, et al. (2020) IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era. Molecular Biology and Evolution 37: 1530–1534. 10.1093/molbev/msaa015 [DOI] [PMC free article] [PubMed] [Google Scholar]
  74. Miyauchi S, Kiss E, et al. (2020) Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits. Nature Communications 11(1): 5125. 10.1038/s41467-020-18795-w [DOI] [PMC free article] [PubMed] [Google Scholar]
  75. Moncalvo JM, Vilgalys R, et al. (2002) One hundred and seventeen clades of euagarics. Molecular Phylogenetics and Evolution 23(3): 357–400. 10.1016/S1055-7903(02)00027-1 [DOI] [PubMed] [Google Scholar]
  76. Morin E, Kohler A, et al. (2012) Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche. Proceedings of the National Academy of Sciences 109(43): 17501–17506. 10.1073/pnas.1206847109 [DOI] [PMC free article] [PubMed] [Google Scholar]
  77. Niskanen T, Liimatainen K, Kytövuori I. (2006) Taxonomy, ecology and distribution of Cortinarius rubrovioleipes and C. hinnuleoarmillatus (Basidiomycota, Agaricales) in Fennoscandia. Karstenia 46(1): 1–2. 10.29203/ka.2006.410 [DOI] [Google Scholar]
  78. Nouhra E, Kuhar F, et al. (2021) Thaxterogaster revisited: a phylogenetic and taxonomic overview of sequestrate Cortinarius from Patagonia. Mycologia 113(5): 1022–1055. 10.1080/00275514.2021.1894535 [DOI] [PubMed] [Google Scholar]
  79. Nugent KG, Saville BJ. (2004) Forensic analysis of hallucinogenic fungi: a DNA-based approach. Forensic Science International 140(2–3): 147–157. 10.1016/j.forsciint.2003.11.022 [DOI] [PubMed] [Google Scholar]
  80. Nylander J. (2004) MrModeltest v2. Program distributed by the author. Evolutionary Biology Centre, Uppsala University.
  81. Osmundson TW, Robert VA, et al. (2013) Filling gaps in biodiversity knowledge for macrofungi: contributions and assessment of an herbarium collection DNA barcode sequencing project. PLoS ONE 8(4): e62419. 10.1371/journal.pone.0062419 [DOI] [PMC free article] [PubMed]
  82. Owen SM, Patterson AM, et al. (2019) Large, high-severity burn patches limit fungal recovery 13 years after wildfire in a ponderosa pine forest. Soil Biology and Biochemistry 139: 107616. 10.1016/j.soilbio.2019.107616 [DOI]
  83. Peintner U, Bougher NL, et al. (2001) Multiple origins of sequestrate fungi related to Cortinarius (Cortinariaceae). American Journal of Botany 88(12): 2168–2179. 10.2307/3558378 [DOI] [PubMed] [Google Scholar]
  84. Piepenbring M, Maciá-Vicente JG, et al. (2020) Mapping mycological ignorance–checklists and diversity patterns of fungi known for West Africa. IMA Fungus 11(1): 13. 10.1186/s43008-020-00034-y [DOI] [PMC free article] [PubMed] [Google Scholar]
  85. Reynolds HT, Vijayakumar V, et al. (2018) Horizontal gene cluster transfer increased hallucinogenic mushroom diversity. Evolution Letters 2(2): 88–101. 10.1002/evl3.42 [DOI] [PMC free article] [PubMed] [Google Scholar]
  86. Riley R, Salamov AA, et al. (2014) Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi. Proceedings of the National Academy of Sciences 111(27): 9923–9928. 10.1073/pnas.1400592111 [DOI] [PMC free article] [PubMed] [Google Scholar]
  87. Ruiz-Dueñas FJ, Barrasa JM, et al. (2021) Genomic analysis enlightens Agaricales lifestyle evolution and increasing peroxidase diversity. Molecular Biology and Evolution 38(4): 1428–1446. 10.1093/molbev/msaa301 [DOI] [PMC free article] [PubMed] [Google Scholar]
  88. Saccardo PA. (1887) Sylloge Hymenomycetum. Vol. I. Agaricineae. Sylloge Fungorum 5: 1–1146. [Google Scholar]
  89. Simão FA, Waterhouse RM, et al. (2015) BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs. Bioinformatics 31: 3210–3212. 10.1093/bioinformatics/btv351 [DOI] [PubMed] [Google Scholar]
  90. Senn-Irlet B, Nyffenegger A, Brenneisen R. (1999) Panaeolus bisporus—an adventitious fungus in central Europe, rich in psilocin. Mycologist 13(4): 176–179. 10.1016/S0269-915X(99)80107-4 [DOI] [Google Scholar]
  91. Sheedy EM, Ryberg M, et al. (2016) Dating the emergence of truffle-like fungi in Australia, by using an augmented meta-analysis. Australian Systematic Botany 29(5): 284–302. 10.1071/SB16025 [DOI] [Google Scholar]
  92. Silvestro D, Michalak I. (2012) raxmlGUI: a graphical front-end for RAxML. Organisms Diversity & Evolution 12: 335–337. 10.1007/s13127-011-0056-0 [DOI] [Google Scholar]
  93. Singer R. (1962) Monographs of South American Basidiomycetes, especially those of the east slope of the Andes and Brazil. V. Gasteromycetes with agaricoid affinities. Boletín de la Sociedad Argentina de Botánica 10: 52–67. [Google Scholar]
  94. Singer R. (1986) The Agaricales in Modern Taxonomy, 4th edn. Koeltz Scientific Books, Königstein.
  95. Song HB, Bau T. (2023) Conocybe section Pilosellae in China: Reconciliation of taxonomy and phylogeny reveals seven new species and a new record. Journal of Fungi 9(9): 924. 10.3390/jof9090924 [DOI] [PMC free article] [PubMed] [Google Scholar]
  96. Song HB, Bau T. (2024) Resolving the polyphyletic origins of Pholiotina s.l. (Bolbitiaceae, Agaricales) based on Chinese materials and reliable foreign sequences. Mycosphere 15(1): 1595–1674. 10.5943/mycosphere/15/1/14 [DOI] [Google Scholar]
  97. Soop K, Dima B, et al. (2016) Psathyloma, a new genus in Hymenogastraceae described from New Zealand. Mycologia 108(2): 397–404. 10.3852/15-143 [DOI] [PubMed] [Google Scholar]
  98. Stajich JE, Wilke SK, et al. (2010) Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus). Proceedings of the National Academy of Sciences 107(26): 11889–11894. 10.1073/pnas.1003391107 [DOI] [PMC free article] [PubMed] [Google Scholar]
  99. Stamets P. (1996) Psilocybin Mushrooms of the World. Ten Speed Press, Berkeley.
  100. Steindorff AS, Carver A, et al. (2021) Comparative genomics of pyrophilous fungi reveals a link between fire events and developmental genes. Environmental Microbiology 23(1): 99–109. 10.1111/1462-2920.15273 [DOI] [PubMed] [Google Scholar]
  101. Stensrud Ø, Orr RJ, et al. (2014) Phylogenetic relationships in Cortinarius with focus on North European species. Karstenia 54(2): 57–71. 10.29203/ka.2014.464 [DOI] [Google Scholar]
  102. Stijve T. (1992) Psilocin, psilocybin, serotonin and urea in Panaeolus cyanescens from various origin. Persoonia 15(1): 117–121. [Google Scholar]
  103. Strauss D, Ghosh S, et al. (2023) Global species diversity and distribution of the psychedelic fungal genus Panaeolus. Heliyon 9(6): e16338. 10.1016/j.heliyon.2023.e16338 [DOI] [PMC free article] [PubMed]
  104. Thomas KA, Peintner U, et al. (2002) Anamika, a new mycorrhizal genus of Cortinariaceae from India and its phylogenetic position based on ITS and LSU sequences. Mycological Research 106(2): 245–251. 10.1017/S0953756201005445 [DOI] [Google Scholar]
  105. Tóth A, Hausknecht A, et al. (2013) Iteratively refined guide trees help improving alignment and phylogenetic inference in the mushroom family Bolbitiaceae. PLoS ONE 8(2): e56143. 10.1371/journal.pone.0056143 [DOI] [PMC free article] [PubMed]
  106. Varga T, Krizsán K, et al. (2019) Megaphylogeny resolves global patterns of mushroom evolution. Nature Ecology & Evolution 3(4): 668–678. 10.1038/s41559-019-0834-1 [DOI] [PMC free article] [PubMed] [Google Scholar]
  107. Vellinga EC, Sysouphanthong P, Hyde KD. (2011) The family Agaricaceae: phylogenies and two new white-spored genera. Mycologia 103(3): 494–509. 10.3852/10-204 [DOI] [PubMed] [Google Scholar]
  108. Vizzini A, Angelini C, Ercole E. (2012) A new Neopaxillus species (Agaricomycetes) from the Dominican Republic and the status of Neopaxillus within the Agaricales. Mycologia 104(1): 138–147. 10.3852/10-345 [DOI] [PubMed] [Google Scholar]
  109. Vizzini A, Consiglio G, Marchetti M. (2019) Mythicomycetaceae fam. nov. (Agaricineae, Agaricales) for accommodating the genera Mythicomyces and Stagnicola, and Simocybe parvispora reconsidered. Fungal Systematics and Evolution 3(1): 41–56. 10.3114/fuse.2019.03.05 [DOI] [PMC free article] [PubMed] [Google Scholar]
  110. Voto P, Angelina C. (2021) First record of Copelandia mexicana in Dominican Republic and notes on Panaeolus. Mycological Observations 1: 44–58. [Google Scholar]
  111. Voto P, Angelini C. (2022) Studies in the Panaeolus papilionaceus complex (Agaricales, Galeropsidaceae): two new species discovered in the Dominican Republic and Australia. Mycological Progress 21(1): 1–15.35261576 [Google Scholar]
  112. Walther G, Garnica S, Wei M. (2005) The systematic relevance of conidiogenesis modes in the gilled Agaricales. Mycological Research 109(5): 525–544. 10.1017/S0953756205002868 [DOI] [PubMed] [Google Scholar]
  113. Wang GS, Cai Q, et al. (2023) Phylogenetic and taxonomic updates of Agaricales, with an emphasis on Tricholomopsis. Mycology 14: 1–30. [DOI] [PMC free article] [PubMed] [Google Scholar]
  114. Wang YW, Tzean SS. (2015) Dung-associated, potentially hallucinogenic mushrooms from Taiwan. Taiwania 60: 160–168. [Google Scholar]
  115. Wijayawardene NN, Hyde KD, et al. (2020) Outline of Fungi and fungus-like taxa. Mycosphere 11(1): 1060–1456. 10.5943/mycosphere/11/1/8 [DOI] [Google Scholar]
  116. Wilson AW, Hosaka K, Mueller GM. (2017) Evolution of ectomycorrhizas as a driver of diversification and biogeographic patterns in the model mycorrhizal mushroom genus Laccaria. New Phytologist 213(4): 1862–1873. 10.1111/nph.14270 [DOI] [PMC free article] [PubMed] [Google Scholar]
  117. Xie X, Zhao L, et al. (2024) Genome-wide characterization and metabolite profiling of Cyathus olla: insights into the biosynthesis of medicinal compounds. BMC Genomics 25(1): 618. 10.1186/s12864-024-10528-3 [DOI] [PMC free article] [PubMed] [Google Scholar]
  118. Yan L, Wang Z, et al. (2021) Genome sequencing and comparative genomic analysis of highly and weakly aggressive strains of Sclerotium rolfsii, the causal agent of peanut stem rot. BMC Genomics 22(1): 276. 10.1186/s12864-021-07534-0 [DOI] [PMC free article] [PubMed] [Google Scholar]
  119. Yang ZL, Cai Q, Cui YY. (2018) Phylogeny, diversity and morphological evolution of Amanitaceae. Biosystematics and Ecology Series 34: 359–380. [Google Scholar]
  120. Yang ZL, Matheny PB, et al. (2005) New Asian species of the genus Anamika (euagarics, hebelomatoid clade) based on morphology and ribosomal DNA sequences. Mycological Research 109(12): 1259–1268. 10.1017/S0953756205003758 [DOI] [PubMed] [Google Scholar]
  121. Zhao RL, Li GJ, et al. (2017) A six-gene phylogenetic overview of Basidiomycota and allied phyla with estimated divergence times of higher taxa and a phyloproteomics perspective. Fungal Diversity 84(1): 43–74. 10.1007/s13225-017-0381-5 [DOI] [Google Scholar]
  122. Zhao RL, Zhou JL, et al. (2016) Towards standardizing taxonomic ranks using divergence times–a case study for reconstruction of the Agaricus taxonomic system. Fungal Diversity 78(1): 239–292. 10.1007/s13225-016-0357-x [DOI] [Google Scholar]
  123. Zhu L, Bau T. (2024) Biodiversity of Herbivores Triggers Species Differentiation of Coprophilous Fungi: A Case Study of Snow Inkcap (Coprinopsis sect. Niveae). Journal of Fungi 10(12): 835. 10.3390/jof10120835 [DOI] [PMC free article] [PubMed] [Google Scholar]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

XML Treatment for Galeropsidaceae
XML Treatment for Panaeolus
XML Treatment for Panaeolus subg. Bresadolomyces
XML Treatment for Panaeolus cyanescens
XML Treatment for Panaeolus subg. Panaeolina
XML Treatment for Panaeolus antillarum
XML Treatment for Panaeolus cinctulus
XML Treatment for Panaeolus foenisecii
XML Treatment for Panaeolus grandis
XML Treatment for Panaeolus limoniformisporus
XML Treatment for Panaeolus medogensis
XML Treatment for Panaeolus nigrescens
XML Treatment for Panaeolus pallidus
XML Treatment for Panaeolus semiovatus
XML Treatment for Panaeolus subfoenisecii
XML Treatment for Panaeolus variabilicolor
XML Treatment for Panaeolus subg. Panaeolus
XML Treatment for Panaeolus papilionaceus
XML Treatment for Panaeolus parvisporus
XML Treatment for Panaeolus xiaolanii
Supplementary material 1

HPLC-MS chromatograms

This dataset is made available under the Open Database License (http://opendatacommons.org/licenses/odbl/1.0/). The Open Database License (ODbL) is a license agreement intended to allow users to freely share, modify, and use this Dataset while maintaining this same freedom for others, provided that the original source and author(s) are credited.

Mao-Qiang He, Wen-Qiang Yang, Dorji Phurbu, Fei Liu, Jia-Xin Li, Bin Cao, Rui-Lin Zhao

Data type

zip

Supplementary material 2

Agaricineae sixgene

This dataset is made available under the Open Database License (http://opendatacommons.org/licenses/odbl/1.0/). The Open Database License (ODbL) is a license agreement intended to allow users to freely share, modify, and use this Dataset while maintaining this same freedom for others, provided that the original source and author(s) are credited.

Mao-Qiang He, Wen-Qiang Yang, Dorji Phurbu, Fei Liu, Jia-Xin Li, Bin Cao, Rui-Lin Zhao

Data type

phy

Supplementary material 3

Galeropsidaceae ITS

This dataset is made available under the Open Database License (http://opendatacommons.org/licenses/odbl/1.0/). The Open Database License (ODbL) is a license agreement intended to allow users to freely share, modify, and use this Dataset while maintaining this same freedom for others, provided that the original source and author(s) are credited.

Mao-Qiang He, Wen-Qiang Yang, Dorji Phurbu, Fei Liu, Jia-Xin Li, Bin Cao, Rui-Lin Zhao

Data type

fas

Supplementary material 4

Galeropsidaceae LSU

This dataset is made available under the Open Database License (http://opendatacommons.org/licenses/odbl/1.0/). The Open Database License (ODbL) is a license agreement intended to allow users to freely share, modify, and use this Dataset while maintaining this same freedom for others, provided that the original source and author(s) are credited.

Mao-Qiang He, Wen-Qiang Yang, Dorji Phurbu, Fei Liu, Jia-Xin Li, Bin Cao, Rui-Lin Zhao

Data type

fas

Supplementary material 5

Galeropsidaceae rpb1

This dataset is made available under the Open Database License (http://opendatacommons.org/licenses/odbl/1.0/). The Open Database License (ODbL) is a license agreement intended to allow users to freely share, modify, and use this Dataset while maintaining this same freedom for others, provided that the original source and author(s) are credited.

Mao-Qiang He, Wen-Qiang Yang, Dorji Phurbu, Fei Liu, Jia-Xin Li, Bin Cao, Rui-Lin Zhao

Data type

fas

Supplementary material 6

Galeropsidaceae rpb2

This dataset is made available under the Open Database License (http://opendatacommons.org/licenses/odbl/1.0/). The Open Database License (ODbL) is a license agreement intended to allow users to freely share, modify, and use this Dataset while maintaining this same freedom for others, provided that the original source and author(s) are credited.

Mao-Qiang He, Wen-Qiang Yang, Dorji Phurbu, Fei Liu, Jia-Xin Li, Bin Cao, Rui-Lin Zhao

Data type

fas

Supplementary material 7

Galeropsidaceae SSU

This dataset is made available under the Open Database License (http://opendatacommons.org/licenses/odbl/1.0/). The Open Database License (ODbL) is a license agreement intended to allow users to freely share, modify, and use this Dataset while maintaining this same freedom for others, provided that the original source and author(s) are credited.

Mao-Qiang He, Wen-Qiang Yang, Dorji Phurbu, Fei Liu, Jia-Xin Li, Bin Cao, Rui-Lin Zhao

Data type

fas

Supplementary material 8

Galeropsidaceae tef1

This dataset is made available under the Open Database License (http://opendatacommons.org/licenses/odbl/1.0/). The Open Database License (ODbL) is a license agreement intended to allow users to freely share, modify, and use this Dataset while maintaining this same freedom for others, provided that the original source and author(s) are credited.

Mao-Qiang He, Wen-Qiang Yang, Dorji Phurbu, Fei Liu, Jia-Xin Li, Bin Cao, Rui-Lin Zhao

Data type

fas

Supplementary material 9

Agaricineae genomic data

This dataset is made available under the Open Database License (http://opendatacommons.org/licenses/odbl/1.0/). The Open Database License (ODbL) is a license agreement intended to allow users to freely share, modify, and use this Dataset while maintaining this same freedom for others, provided that the original source and author(s) are credited.

Mao-Qiang He, Wen-Qiang Yang, Dorji Phurbu, Fei Liu, Jia-Xin Li, Bin Cao, Rui-Lin Zhao

Data type

zip

Data Availability Statement

All of the data that support the findings of this study are available in the main text or Supplementary Information.


Articles from IMA Fungus are provided here courtesy of The International Mycological Association

RESOURCES