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PLOS One logoLink to PLOS One
. 2026 Feb 26;21(2):e0343702. doi: 10.1371/journal.pone.0343702

Attenuating effects of inflammatory pathway by prolonged left ventricular unloading after myocardial infarction in male rats

Jingwen Gao 1,#, Yasushige Shingu 1,*,#, Ryota Azuma 1,¤, Satoru Wakasa 1
Editor: Vincenzo Lionetti2
PMCID: PMC12944788  PMID: 41746910

Abstract

Background

Inflammatory response plays a pivotal role in myocardial injury and post-infarction remodeling after acute myocardial infarction (AMI). Mechanical unloading (UL) of the left ventricle (LV) has been proposed as a potential therapeutic strategy to preserve cardiac function; however, its effects on myocardial inflammation remain incompletely understood.

Methods

We employed a rat model of partial UL using heterotopic heart-lung transplantation following AMI. RNA sequencing (RNA-seq) was performed to evaluate transcriptomic changes, with a specific focus on inflammatory pathways in the non-infarcted remote area. Immune cell abundance was estimated using deconvolution analysis (QUANTISEQ). Quantitative PCR was performed to analyze some inflammatory cytokines, and macrophage polarization was evaluated by immunohistochemistry.

Results

AMI significantly impaired cardiac function, which was mitigated by UL. RNA-seq analysis revealed marked activation of inflammatory pathways and identified several hub genes involved in cytokine signaling following AMI, while these transcriptional changes were not significantly altered in UL groups after AMI. Immune cell profiling demonstrated an increase in M2 macrophages after AMI, while UL preserved M2 macrophage levels. Histological analysis further supported UL’s modulatory effect on macrophage polarization. Pro-inflammatory cytokines TNFα and IL1β were upregulated after AMI but showed attenuation with UL.

Conclusion

Partial UL potentially attenuates cardiac functional deterioration after AMI while exerting substantial effects on inflammatory gene expression and macrophage polarization. These findings suggest that the cardioprotective effects of UL may be correlated with the modulation of inflammatory pathways in the remote area after AMI.

Introduction

Acute myocardial infarction (AMI) remains a leading cause of heart failure and death worldwide, despite substantial advances in reperfusion strategies and pharmacological therapies [1,2]. Myocardial ischemia initiates a robust inflammatory response that is essential for clearing necrotic debris and initiating tissue repair [3]. However, dysregulated or persistent inflammation may exacerbate myocardial injury and contribute to adverse remodeling and progressive heart failure [4].

Mechanical unloading (UL) of the left ventricle (LV), typically achieved through ventricular assist devices, has emerged as a promising therapeutic strategy to reduce myocardial wall stress, oxygen consumption, and infarct expansion following AMI [5], and has been increasingly applied in clinical settings, such as the percutaneous Impella device [6,7]. Several studies have demonstrated that UL can reduce infarct size, preserve cardiac function, and modulate myocardial metabolic stress when initiated during ischemia or at the time of reperfusion [810], while its clinical benefit needs further investigation. Furthermore, most existing studies have primarily focused on acute hemodynamic and metabolic effects, while the influence of prolonged UL, including immune responses, inflammatory signaling, and immune cell dynamics, remains poorly understood.

To address these issues, we employed an experimental model of a 2-week partial UL via heterotopic heart-lung transplantation in rats with a focus on viable myocardium in the remote area. Comprehensive transcriptomic profiling by RNA sequencing (RNA-seq) was performed. The results suggest that the molecular pathways of post-infarction inflammation were activated after AMI, which were attenuated by UL. Furthermore, immune cell abundance, inflammatory cytokine expression, and macrophage polarization were suppressed by UL. This integrated approach may provide novel insights into the interaction between mechanical UL and myocardial inflammation and offer potential therapeutic implications for improving cardiac function following AMI.

Materials and methods

Study protocol and animal models

Nine-week-old male Lewis rats were purchased from Japan SLC, Inc (Shizuoka, Japan). All animal experiments were conducted in accordance with the Hokkaido University Manual for Implementing Animal Experimentation and in compliance with the Guide for the Care and Use of Laboratory Animals of the US National Institutes of Health (NIH; publication No. 85-23, revised 1996). The study was approved by the Institutional Animal Care and Use Committee (No. 22-0126).

As shown in Fig 1A, the study included four groups: non-AMI (n = 6), AMI (n = 6), non-AMI/UL (n = 5), and AMI/UL (n = 5). AMI was induced by ligating the left anterior descending artery (LAD) using 7−0 polypropylene sutures (Ethicon; Raritan, NJ, USA). In non-AMI groups, the same procedures were performed without LAD ligation. According to our previous report, UL was performed after AMI via heterotopic heart-lung transplantation, which provided partial UL of the LV [11]. Briefly, heparin (1000 U; Mochida Pharmaceutical; Tokyo, Japan) was injected into the donor rat via the inferior vena cava. Cardiac arrest was induced by administration of 50-mL St. Thomas II solution. Finally, the donor heart and lung were excised and the ascending aorta of the donor heart was sutured to the abdominal aorta of the recipient rat (Fig 1B) within 1 h after AMI. General anesthesia was induced for all procedures by a single intramuscular injection of ketamine (90 mg/kg; Ketalar; Daiichi Sankyo Pharmaceutical, Tokyo, Japan) and xylazine (10 mg/kg; Selactar; Bayer Yakuhin; Osaka, Japan) followed by intubation and mechanical ventilation. After 14 days of UL, the rats were euthanized with intraperitoneal injection of secobarbital sodium (150 mg/kg; Aional; Nichi-Iko Pharmaceutical; Toyama, Japan). In the UL groups, only the donor hearts were excised for Langendorff perfusion and used for further experiments. For the first 5 days post-surgery, water containing aspirin (Fujifilm Wako Pure Chemical Corporation, Osaka, Japan) for pain relief (500 mg aspirin + 500 ml water) was provided as free-access drinking water. Thereafter, regular water was provided. Heterotopic heart transplantation was performed in syngeneic Lewis rats to prevent immunologic incompatibility without immunosuppression. Animals were administered an overdose of intraperitoneal pentobarbital (150 mg/kg) when they reached the humane endpoints, including difficulty eating or drinking, and signs of distress (self-mutilation, abnormal posture, respiratory distress, vocalization, etc.).

Fig 1. Study protocol (A) and left ventricular UL model (B).

Fig 1

White bars denote periods without intervention; black bars represent periods with intervention (LAD ligation or unloading). AMI, acute myocardial infarction; LAD, left anterior descending artery; UL, unloading.

Heart function analysis

Heart function was evaluated using echocardiography and a Langendorff perfusion system. Echocardiography was performed transthoracically or transabdominally using a Sonos 5500 ultrasound system with a 12-MHz phased-array transducer (Philips Medical Systems; Best, Netherlands). Under anesthesia by a single intramuscular injection of ketamine (90 mg/kg) and xylazine (10 mg/kg), heart rate (HR), LV end-diastolic dimension (LVEDD), and LV end-systolic dimension (LVESD) were measured from M-mode tracings obtained from the long-axis view of the LV. Echocardiography was conducted before the operation (baseline) and before euthanasia.

To assess cardiac function under constant loading conditions, the Langendorff perfusion was employed. The hearts were perfused with Krebs-Henseleit buffer. Its composition is provided in Table S1 in S2 File. The buffer was oxygenated with 95% O2 and 5% CO2. The perfusion pressure was maintained at 60 mmHg, and the chamber temperature was set to 37°C. Upon stabilization, a 0.06-mL latex balloon was placed in the LV through the left atrium to measure LV pressure, which was recorded with PowerLab (ADInstruments; Dunedin, New Zealand) and analyzed using Lab-Chart (ADInstruments). The end-diastolic pressure of the LV was maintained at 5–10 mmHg. HR, coronary flow, LV developed pressure (LVDP), maximal rates of LV pressure rise and fall (maximum and minimum dP/dt), and rate pressure product (RPP = HR × LVDP) were acquired at the end of a 30-min perfusion.

The infarct area was identified as the macroscopically white region. The border area was defined as the area extending 3 mm from the infarct area to the free wall. The remaining zone was a remote area. The tissue samples were preserved in −80 °C for further investigation.

Histology analysis

Fixed LV tissue blocks were sectioned and stained with hematoxylin–eosin to assess myocyte morphology. Cardiomyocyte cross-sectional area was quantified in non-infarcted myocardium by measuring 100 randomly selected myocytes containing a visible central nucleus per animal. Areas were outlined and calculated using ImageJ (NIH, 1.54f, U.S. National Institutes of Health; Bethesda, MD, USA).

Masson’s trichrome staining was employed to determine the extent of fibrosis. For each animal, ten random microscopic fields from the non-infarcted zone were imaged, and collagen-rich regions were segmented using threshold-based detection in ImageJ 1.54f. Fibrosis was expressed as the percentage of stained area relative to total tissue area, and mean values per animal were used in group-level analyses.

RNA sequence analysis

After the Langendorff perfusion, LV myocardial samples of the non-infarcted area were collected and stored at –80 °C. Total RNA was extracted using High Pure RNA Tissue Kit (Roche, Basel, Switzerland). RNA-seq was performed by Takara Bio Inc. (Kanagawa, Japan), and the data were uploaded into Annotare 2.0 with an accession number of E-MTAB-16419. Data analysis was conducted using the online application RNAseqChef (https://imeg-ku.shinyapps.io/RNA-seqChef_mirror2/; accessed Aug 18, 2025). Principal component analysis (PCA) and clustering were performed. Differentially expressed genes (DEGs) were identified with a false discovery rate < 0.05. K-means analysis was used to cluster DEGs into distinct expression pattern groups, k = 2, according to the Silhouette method, and the 2000 most significant genes were selected using a fold change > 1.5 between non-AMI and AMI groups. Multi-group DEG analysis was also performed on the same application using the same cut-off. Then, we focused on the genes that were markedly upregulated after AMI and maintained by UL. We performed pathway enrichment analysis using the Kyoto Encyclopedia of Genes and Genomes (KEGG) database and explored the connections between genes and pathways using cnetplot in RNAseqChef. The genes connected to multiple pathways in the cnetplot were regarded as hub genes.

Immune cell infiltration

Because we identified inflammatory pathways by the aforementioned classification analysis, we deconvolved the immune cell fraction from the row data of RNA-seq using QUANTISEQ (http://icbi.at/quantiseq; accessed Aug 18, 2025). Although QUANTISEQ was originally developed for human tumor RNA-seq data, we applied it to rat myocardial RNA-seq because no rat-specific immune deconvolution pipelines are currently available and many immune-cell signature genes are evolutionarily conserved across species. We used the default human TIL10 signature matrix and performed deconvolution on normalized TPM data from our bulk RNA-seq. Subsequently, we performed a clustering analysis of immune cell numbers across the four groups and analyzed the association between the hub gene expression and cell numbers using R version 4.3.2 (R Core Team, Vienna, Austria).

Inflammatory cytokine analysis

To validate the RNA-seq results, the expression levels of inflammatory cytokines in LV myocardial samples from the remote areas were analyzed. mRNA levels of interleukin (IL) 1β, IL6, IL10, and tumor necrosis factor (TNF) α were quantified by RT-qPCR. Total RNA was reverse transcribed into cDNA using the Transcriptor First Strand cDNA Synthesis Kit (Roche). Quantitative PCR was performed using the FastStart Essential DNA Probes Master (Roche). The sequences of the primers and probes were listed in Table S2 in S2 File. The relative gene expressions were analyzed using a housekeeping gene Rsp29.

Immunohistochemistry

Based on the results from QUANTISEQ, we focused on macrophages. We performed immunofluorescence staining using LV tissues. Briefly, LV myocardial samples were fixed in 3.5% neutral buffered formalin and embedded in paraffin. After deparaffinization and rehydration, antigen retrieval was performed using Dako Target Retrieval Solution, pH 9.0 (Dako S2367, Singapore), at 95°C for 20 minutes. Sections were incubated overnight at 4 °C with rabbit recombinant multiclonal anti-iNOS antibody (1:500 dilution, ab283655, Abcam, Cambridge, UK), anti-CD163 antibody (1:500 dilution, ab316218, Abcam), and goat polyclonal anti-SPP1 antibody (1:100 dilution, ab11503, Abcam) for the detection of M1 macrophages, M2 macrophages, and SPP1+ macrophages, respectively. Following primary antibody incubation, slides were washed and incubated for 30 minutes at room temperature with the corresponding secondary antibodies: Goat anti-Rabbit IgG (H + L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor™ Plus 594 (1:100 dilution, A32740, Invitrogen, CA, USA) and fluorescent (FITC)-conjugated AffiniPure Goat Anti-Mouse lgG (H + L) antibody (1:100, AB_2338589, Jackson ImmunoResearch Laboratories, Inc, Ely, UK). Nuclei were counterstained with 4′,6-diamidino-2-phenylindole (DAPI). Stained sections were imaged using a fluorescence microscope (BZ-X, Keyence Corporation, Osaka, Japan). For quantitative analysis, positive cells were detected in randomly selected fields using Image J and the ratio of positive-cell area to field area was calculated.

Statistical analysis

All data in this study are presented as mean ± SEM. Normality was evaluated using residual-based diagnostics, with visual inspection of Q–Q plots (Fig S1 in S1 File). Because UL is implemented via a transplantation-based model, it inevitably introduces biological effects independent of AMI and therefore cannot be regarded as a neutral sham condition. To address this limitation, we adopted a four-group design analogous to knockout (KO) studies (non-AMI, AMI, non-AMI/UL, and AMI/UL) and analyzed the data using two-way ANOVA with AMI and UL as factors. The interaction term (AMI × UL) was used to assess whether UL influenced the time course of AMI. Post hoc Bonferroni tests were conducted between non-AMI and AMI, and between non-AMI/UL and AMI/UL. Effect sizes (partial η²) were calculated using Python 3.11.12 (Python Software Foundation, Wilmington, DE, USA) in Google Colaboratory (Google Research, Mountain View, CA, USA, https://colab.research.google.com/; accessed Apr 30, 2025) for parameters with p < 0.2. Some functional and histological data were collected from the same animal cohort as our previous publication [11]. Statistical analysis was performed with R 4.3.0 and Prism 9.5.1 (GraphPad, San Diego, CA, USA). A two-tailed p < 0.05 was considered statistically significant.

Results

Heart function and pathological examinations

The body weight, heart weight, and echocardiographic parameters are presented in Tables S3 and S4 in S2 File. There were no differences in the baseline values. The heart size was significantly reduced by 14-day UL.

Because echocardiographic assessment under varying loading conditions is not appropriate, cardiac function was evaluated using isolated heart perfusion to assess the effects of AMI and UL (Fig 2A). HR and coronary flow were comparable among groups. AMI markedly reduced cardiac contractility and relaxation, as reflected by decreases in minimum dP/dt and RPP. Although unloading did not produce statistically significant improvements in functional parameters, the AMI/UL group demonstrated a modest trend toward attenuation of AMI-induced decline, with RPP values approaching those of the non-AMI/UL group. The effect size for the interaction (partial η² = 0.085; threshold for moderate effect = 0.06) suggests a potential influence of unloading on functional adaptation, despite the absence of a significant AMI × UL interaction. These observations indicate that the degree of partial unloading applied in this model may influence post-infarction function, although the magnitude of its effect on global pump function was limited.

Fig 2. Cardiac functional parameters (A) and myocyte size and fibrosis (B) 14 days after surgery.

Fig 2

Data are presented as mean ± SEM. Statistical significance was assessed using two-way ANOVA, followed by Bonferroni post hoc test. Interaction p-values and effect sizes (partial η² values) are shown. *P < 0.05, **P < 0.01, ***P < 0.001, ****P < 0.0001. AMI, acute myocardial infarction; HR, heart rate; ns, not significant; RPP, rate pressure product; UL, unloading.

In pathological examinations (Fig 2B), there was no interaction (AMI × UL) in either parameter (myocyte area or fibrosis), and partial η² values were small (< 0.06). This suggests that UL did not influence the AMI time course in terms of myocyte remodeling and fibrosis. Also, there were no significant interaction of myocyte area and fibrosis in the border zone (Fig S2 in S1 File).

RNA-seq analysis and hub gene identification

As shown in Fig 3A, the AMI group was separated from the non-AMI group, whereas no clear separation was observed between the AMI/UL and non-AMI/UL groups in the PCA plot. Compared to the DEGs between the non-AMI and AMI group (Fig 3B), there were fewer DEGs between the UL groups (Fig 3C). AMI changed gene expression in both groups with or without UL, with more genes upregulated than downregulated. The results of other group comparisons are shown in Fig S3 in S1 File.

Fig 3. RNA-seq analysis of the LV myocardium in the non-infarcted area 14 days after surgery.

Fig 3

(A) Principal component analysis (PCA) of RNA-seq data (rlog-transformed counts). PC1 and PC2 explain 35.2% and 17.8% of total variance, respectively. Samples are color-coded by treatment group (non-AMI: light Blue; AMI; red; non-AMI with UL: purple; and AMI with UL: green). Each point represents an individual biological replicate (n = 5 or 6 per group). (B and C) Volcano plot of differentially expressed genes between non-AMI and AMI, non-AMI with UL and AMI with UL. Genes with adjusted p < 0.05 and |log₂ fold change| > 1.5 are considered significantly differentially expressed (red: upregulated; blue: downregulated; gray: not significant). Hierarchical clustering heatmap indicates the differentially expressed genes. Rows represent genes and columns represent individual samples. Color scale indicates relative expression levels (red: high; blue: low). AMI, acute myocardial infarction; LV, left ventricle; UL, unloading.

We used DEGs with a p value < 0.05 and clustered them by RNAseqChef according to their expression among four conditions. The results of k-means analysis are shown in Fig 4A. Genes in cluster 1 were related to fatty acid metabolism, oxidative phosphorylation, adipogenesis, peroxisome, and bile acid metabolism (Fig 4B). The expression of Cpt1b, CD36l1, and Fabp3, which are related to fatty acid metabolism, was significantly decreased after AMI (Fig 4C). In cluster 2, the genes were mainly related to epithelial–mesenchymal transition, TNFα signaling via NF-κB, allograft rejection, inflammatory response, and IL-6–JAK–STAT3 signaling (Fig 4B). Because cluster 2 contained the largest number of genes, inflammation may represent the most prominent difference among the four groups.

Fig 4. Gene clustering from k-means analysis.

Fig 4

(A) Heatmap of two gene expression clusters across the four groups (non-AMI, AMI, non-AMI/UL, and AMI/UL). (B) KEGG pathway enrichment for each cluster showing metabolism-related pathways in Cluster 1 and inflammation/immune-related pathways in Cluster 2. K-means analysis was used to cluster DEGs into distinct expression pattern groups, k = 2, according to the Silhouette method, and the 2000 most significant genes were selected using a fold change > 1.5 between non-AMI and AMI groups. (C) Gene expressions for Cpt1b, Cd36l1, and Fabp3. Data are presented as mean ± SEM. Statistical significance was assessed using two-way ANOVA, followed by Bonferroni post hoc test. Interaction p-values and effect sizes (partial η² values) are shown. *P < 0.05, ***P < 0.001, ****P < 0.0001. AMI, acute myocardial infarction; LV, left ventricle; UL, unloading.

Multi-group DEG analysis was also performed for different expression patterns among four groups (Fig 5A). There were 10 groups identified. In groups 1 and 9, there was a marked increase in gene expression between the non-AMI and AMI groups, while almost no difference between the non-AMI/UL and AMI/UL groups. Although groups 8 and 10 also showed different trends in gene expression depending on the presence or absence of UL following AMI, the number of affected genes was too small to allow for meaningful further analysis. Because we aimed to find the genes that were most related to UL, we focused on groups 1 and 9 in the next analysis.

Fig 5. Hub gene detection related to inflammation from the RNA-seq analysis.

Fig 5

(A) Classification of DEGs into distinct expression pattern groups using a fold change > 1.5 between the non-AMI and AMI groups as a cut-off. The genes in groups 1 and 9 were greatly elevated after AMI, and the elevation was suppressed by UL. (B) Pathway analysis using KEGG database and protein-protein interaction network to find hub genes from shared genes. (C) Comparison of the hub genes among the four groups.. Data are presented as mean ± SEM. Statistical significance was assessed using two-way ANOVA, followed by Bonferroni post hoc test. Interaction p-values and effect sizes (partial η² values) are shown. *P < 0.05, **P < 0.01. AMI, acute myocardial infarction; DEG, differentially expressed genes; KEGG, Kyoto Encyclopedia of Genes and Genomes; UL, unloading.

Fig 5B shows the result of pathway enrichment analysis. Group 1 was associated with cytokine-cytokine receptor interaction, graft versus host disease, and intestinal immune network. Group 9 included natural killer cell mediated cytotoxicity, T cell and B cell receptor pathways. In both groups 1 and 9, pathways related to inflammation and immune cells were highly enriched. Quantitative analysis of related hub genes revealed that the expression levels were significantly increased after AMI and remained unchanged following UL in most genes (Fig 5C). The significant interactions (AMI × UL) were observed in Interleukin-1 receptor type 2 (IL1r2), Interleukin-2 receptor alpha chain (IL2ra), and Rat MHC class II molecule (RT1 Db1) in group 1. Although the p values were not significant, the effect sizes of interaction were large in Lymphocyte cytosolic protein 2/ SLP-76 (Lcp2) and Protein kinase C beta (Prkcb) in group 9.

Immune cell infiltration and its association with hub genes

Immune cell fraction in LV myocardial tissues was predicted using QUANTISEQ across the four experimental groups. As shown in Fig 6A, the proportion of M2 macrophages was significantly increased after AMI compared to non-AMI (p < 0.001), indicating activation of an anti-inflammatory response 14 days after myocardial injury. On the other hand, UL preserved M2 macrophage levels, as no significant differences were observed between non-AMI/UL and AMI/UL groups. Furthermore, the interaction (AMI × UL) had a moderated effect size (0.06). Other immune cell subsets, including monocytes, NK cells, and T cells (CD4+, CD8+, regulatory T cell), showed no significant differences among groups. Consistent with these findings, hierarchical clustering heatmap further demonstrated distinct patterns of immune cell composition, with increased M2 macrophage infiltration predominantly in AMI groups (Fig 6B). Furthermore, correlation analysis of hub gene expression with immune cell abundance revealed that hub genes from RNA-seq were largely positively correlated with immune cell activation in AMI (Fig 6C).

Fig 6. Deconvolved immune cell type expression from the raw RNA-seq data using QUANTISEQ.

Fig 6

(A) Comparison of the cell type fractions among the four groups. (B) Heatmap of the correlation between immune cell types and each rat of the four groups. (C) Association between the hub gene expressions and cell types. Data are presented as mean ± SEM. Statistical significance was assessed using two-way ANOVA, followed by Bonferroni post hoc test. Interaction p-values and effect sizes (partial η² values) are shown. ***P < 0.001. AMI, acute myocardial infarction; UL, unloading.

Immune cytokine expressions

The expression of inflammatory cytokines in the LV non-infarct areas was assessed by RT-qPCR (Fig 7). TNFα and IL1β levels were significantly elevated in the AMI group compared to the non-AMI group, indicating enhanced pro-inflammatory response following AMI. UL significantly attenuated the expression of both TNFα and IL1β. In contrast, IL10, an anti-inflammatory cytokine, was also significantly increased in the AMI group compared to the non-AMI group, suggesting a compensatory anti-inflammatory response. UL suppressed this AMI-induced IL10 upregulation.

Fig 7. Gene expression levels of inflammatory cytokines in the LV myocardial samples of remote areas 14 days after surgery.

Fig 7

Data are presented as mean ± SEM. Statistical significance was assessed using two-way ANOVA, followed by Bonferroni post hoc test. Interaction p-values and effect sizes (partial η² values) are shown. **P < 0.01. AMI, acute myocardial infarction; IL, interleukin; LV, left ventricle; and TNF, tumor necrosis factor; UL, unloading.

Immunohistochemistry for macrophages

To further validate the alterations in macrophage polarization, immunohistochemical analysis of M1 (iNOS+) and M2 (CD163+) macrophages was performed in non-infarcted areas (Fig 8A). Consistent with the previous immune cell composition and gene expression results, M2 macrophage levels were significantly increased after AMI compared to non-AMI, while UL attenuated the increase in M2 macrophages after AMI (interaction p = 0.0082; partial η² = 0.30; threshold for large effect = 0.14). M1 macrophages did not differ significantly among groups. Additionally, macrophage distribution was evaluated in both the infarct and border zones (Fig S4A in S1 File). In the infarct area, AMI led to significant increases in both M1 and M2 macrophage infiltration, and no AMI × UL interaction was observed. In the border zones, M2 macrophages were also elevated in AMI compared to non-AMI, whereas M1 macrophage levels and M1/M2 ratios remained unchanged across groups and there was no interaction between AMI and UL.

Fig 8. M1, M2 and SPP1 positive macrophages from remote areas 14 days after surgery.

Fig 8

(A) Quantification of M1, M2, and M1/M2 macrophages across groups (non-AMI, AMI, non-AMI/UL, and AMI/UL). Data are shown as positive cell fractions with statistical comparisons indicated. (B) Representative immunofluorescence staining of iNOS and CD163 (red), SPP1 (green), and DAPI (blue) in the remote myocardium. No SPP1+ cells were detected in all groups. Scale bars, 100 μm. Data are presented as mean ± SEM. Statistical significance was assessed using two-way ANOVA, followed by Bonferroni post hoc test. Interaction p-values and effect sizes (partial η² values) are shown. **P < 0.01. AMI, acute myocardial infarction; UL, unloading.

Given that pro-inflammatory cytokines (TNFα and IL1β) are primarily secreted by M1 macrophages, we analyzed SPP1+ M2 macrophages using immunostaining, because a subset of SPP1 + M2 macrophages can also produce inflammatory cytokines [6,12]. Fig 8B shows the immunostaining of iNOS, CD163 and SPP1 in the non-infarcted region. While double-positive macrophages were observed in the infarcted area and border zone (Fig S4B in S1 File), no such cells were detected in the non-infarcted region. This suggests that the SPP1+ M2 macrophages are unlikely to account for the increase in inflammatory cytokines, and the primary origin of the cytokines may originate from other cells.

Discussion

The main findings of this study were that AMI induces sustained expression of inflammatory cytokines and marked accumulation of M2 macrophages two weeks after AMI, consistently observed across myocardial regions including the infarcted area, border zone, and non-infarcted region. In contrast, UL had limited influence on macrophage polarization, primarily restricted to the non-infarcted region. Moreover, given that the increased M2 macrophages were negative for SPP1 expression, other cell types may represent alternative sources of the inflammatory cytokines. Unlike prior studies focusing mainly on infarct or border zones, our analysis highlights the importance of the viable remote area as a key site of persistent immune modulation after AMI.

Inflammation in heart failure induced by myocardial infarction

Numerous previous studies have focused on inflammatory activation within the infarct zone, where massive cardiomyocyte necrosis triggers robust immune cell infiltration and cytokine release [13]. In addition, circulating inflammatory cytokines, for example TNFα, IL1β, and IL6, have been widely evaluated as prognostic indicators in patients with AMI and heart failure [14,15]. The accumulation of these inflammatory cells and pro-inflammatory cytokines contributes to tissue injury, extracellular matrix degradation, and adverse remodeling [16]. However, accumulating evidence suggests that inflammation may also affect the remote, non-infarcted myocardium, contributing to adverse remodeling and progressive dysfunction. A study using autopsy from AMI patients suggests that immune cell infiltration also increased in the unaffected viable remote area, even though it is less pronounced than in the infarct area [17]. Consistent with these findings, a pilot clinical study using MRI T2 mapping revealed that inflammatory changes in remote myocardium were associated with LV remodeling after AMI [18]. Furthermore, a preclinical study using the promising inflammatory imaging agent [68Ga] Ga-Pentixa in an AMI rat model also demonstrated that inflammation increased in the remote myocardium and was strongly correlated with contemporaneous end-diastolic and systolic volumes [19].

In this study, we also examined inflammatory responses in the non-infarcted remote myocardium following AMI. RNA-seq analysis demonstrated marked upregulation of multiple inflammatory pathways and hub genes related to cytokine signaling and immune activation, indicating that inflammatory activation extends beyond the infarct core to the viable remote myocardium. Among these inflammation-related hub genes, Il1r2, Il2ra, and RT1-Db1 exhibited significant AMI × UL interaction effects, suggesting that their expression is specifically modulated by UL in post infarction. Notably, previous clinical evidence has shown that circulating Il1r2 levels in patients with myocardial infarction are independently associated with parameters of adverse left ventricular remodeling [20]. In our study, UL alone caused an increase in Il1r2 expression, and it was minimally affected by AMI. Thus, the suppression of Il1r2 in the AMI/UL group may possibly reflect a shift in inflammatory signaling toward a transcriptional profile associated with less adverse remodeling, although causality cannot be inferred from the present data. No studies have directly linked Il2ra or RT1-Db1 to AMI or mechanical unloading. Therefore, our data provide novel evidence that ventricular UL modulates inflammation-related gene programs in the remote myocardium after AMI, highlighting a previously underexplored interaction between UL and post-AMI inflammatory regulation. These results were further validated by RT-qPCR. The anti-inflammatory cytokine IL10 was also upregulated in the AMI group, which may represent a compensatory feedback mechanism to counteract increased inflammatory signaling. These findings suggest that inflammation is not limited to the infarct area but may extend to non-infarcted regions, potentially contributing to global ventricular function and remodeling after AMI. Canonical Wnt/β-catenin signaling has been implicated in post-MI inflammation and fibrotic remodeling in previous studies [21,22]. However, in the present study, the expression of representative canonical Wnt markers (Ctnnb1, Axin2, Lrp6, and Tcf7l2, data not shown) was not significantly altered among groups, and no interaction between MI and unloading was detected. These data suggest that canonical Wnt activation was not prominent in the remote myocardium under our experimental conditions, and that the inflammatory modulation observed here may be governed by other signaling mechanisms.

Macrophages in heart failure

Macrophage polarization represents a critical regulator of post-AMI repair and is differentially influenced by mechanical unloading. However, studies on macrophages during UL after AMI remain limited. Zhou et al. examined macrophage dynamics in both infarcted and non-infarcted myocardial regions using a heterotopic heart transplantation model (complete UL). They observed that UL delayed the resolution of inflammation in the infarcted area, as indicated by prolonged macrophage infiltration. However, in the non-infarcted myocardium, immune cell infiltration was transient and not sustained beyond the early postoperative phase, suggesting that UL itself does not promote persistent inflammation in the remote area [23]. In contrast, our results from QUANTISEQ suggested that AMI led to an increase in M2 macrophage counts, and it was further supported by immunohistochemical analysis. We observed sustained M2 macrophage accumulation in the remote myocardium 14 days post-AMI, which was significantly attenuated by partial UL. Furthermore, UL tended to selectively suppress M1 polarization (partial η2 = 0.0606: moderate effect) in the infarct zone without significantly affecting M2 levels (partial η2 = 0.0011: no effect). These findings suggest that mechanical UL exerts region- and phenotype-specific immunomodulatory effects, differing from prior reports and highlighting the importance of assessing macrophage polarization rather than total macrophage counts. The discrepancy between the results of Zhou et al. and ours could be attributed to the difference in the models: complete vs. partial UL. A significant reduction in heart rate may have contributed to delayed lymphatic drainage of macrophages in the infarct zone in their complete UL model, while heart rate was not altered by UL in our model.

Macrophage polarization plays a critical role in post-AMI inflammation and repair. Pro-inflammatory M1 macrophages predominate in the early phase, whereas M2 macrophages contribute to inflammation resolution and tissue remodeling. A timely transition from M1 to M2 is essential for optimal healing, and disruption of this process has been linked to adverse remodeling. To our knowledge, this is the first study to report macrophage polarization during UL after AMI, showing that M2 macrophages increased following AMI but remained at similar levels among the UL groups. Regarding the potential mechanisms underlying the M1-to-M2 transition, recent evidence indicates that cellular metabolic status, particularly energy metabolism, is a critical regulator of macrophage polarization [24]. AMP-activated protein kinase (AMPK) is a key cellular energy sensor that has emerged as an important modulator of immune cell function, including macrophage polarization. Activation of AMPK promotes M2 polarization while suppressing pro-inflammatory M1 phenotypes. Mounier et al. demonstrated that AMPKα1 is required for the transition of macrophages from M1 to M2 during the resolution of inflammation, in which AMPKα1-deficient macrophages exhibit impaired acquisition of M2 markers and defective phagocytosis-driven phenotype switching [25]. Given that UL decreases myocardial metabolic demand and, as shown in our previous study [11], suppresses AMPK activation, UL is therefore likely to contribute to the reduced M2-dominant macrophage polarization in the remote area.

Because M2 macrophages increased only in the AMI group, we considered whether there might be other explanations for this result. Reggio et al. reported that SPP1 ⁺ macrophages often display M2-like features, while also expressing certain pro-inflammatory (M1-like) genes, such as TNFα and IL1β [12]. This could be one reason for the increased M2 macrophages in the AMI group. However, in our study, the increased M2 macrophages were negative for SPP1 expression in the AMI group, suggesting that the cardiomyocytes or other immune cell populations may represent the principal source of inflammatory cytokines.

Limitations

This study has several limitations. First, although we observed that UL attenuated inflammatory cytokine expression and was associated with preserved LV function after AMI, a direct causal relationship between inflammation and LV functional changes could not be established. Future studies should investigate whether suppression of inflammation after AMI and UL directly influences LV function, and should elucidate the mechanistic link between immune modulation and cardiac performance. Second, other M2-type macrophage subsets capable of producing inflammatory cytokines were not examined. Alexian et al. reported that in an animal model of pressure overload, IL1β derived from Cx3Cr1-expressing macrophages modulated fibroblast states, and IL1β neutralization improved outcomes in heart failure [26]. Third, only male rats were used, which may limit generalizability, and whether sex modifies the effects of unloading after MI should be evaluated in the future. Finally, we did not quantify infarct size, cardiomyocyte apoptosis, and capillary and arteriolar density in this study. Because only a single papillary-level section was collected per heart, and specialized staining is necessary, reliable estimation was not feasible. Future studies will incorporate serial histological sectioning or whole-heart TTC staining to accurately determine infarct size and evaluate whether unloading affects acute myocardial injury.

Conclusions

Partial UL suggests a potential influence on cardiac function after AMI and exerts effects on inflammatory gene expressions as well as macrophage polarization in the non-infarcted area. These findings suggest that mechanical UL may confer cardioprotective effects through modulation of localized inflammatory responses within the viable remote myocardium, at least in part. Nevertheless, the coexistence of fibrosis and myocardial atrophy highlights the complex interplay between the beneficial effects of UL and maladaptive remodeling. A deeper understanding of the molecular mechanisms underlying this balance will be critical for optimizing UL strategies to improve therapeutic outcomes in ischemic heart failure.

Supporting information

S1 File. Normality test for the parameters, cardiac myocyte size and fibrosis in the border zone 14 days after surgery, differential gene expression analysis between groups, and macrophage polarization in infarct areas and border zones.

(DOCX)

pone.0343702.s001.docx (2.3MB, docx)
S2 File. Composition of the Krebs-Henseleit buffer, sequences of the primers and probes, body weight, LV weight, LV/body weight after 14 days, and echocardiographic parameters.

(DOCX)

pone.0343702.s002.docx (24.5KB, docx)

Acknowledgments

We appreciate the technical support provided by Keyence Corporation for the use of fluorescence microscopy and Sapporo General Pathology Laboratory Co., Ltd. for their valuable technical assistance related to pathology. We acknowledge the assistance of ChatGPT (OpenAI) for language editing and improvement of the manuscript. The authors are fully responsible for the scientific content and interpretation.

Data Availability

All RNA-seq files are available from the ArrayExpress database (accession number(s) E-MTAB-16419).

Funding Statement

This study was partly supported by JSPS KAKENHI Grant Number 22K08909 and JST SPRING, Grant Number JPMJSP2119. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript. There was no additional external funding received for this study.

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Decision Letter 0

Vincenzo Lionetti

1 Dec 2025

Dear Dr. Shingu,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

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Additional Editor Comments:

Major issues

1) The manuscript provides valuable insights into post-infarction remodeling and the effects of LV unloading but fails to consider the potential involvement of the canonical Wnt/β-catenin pathway, a key regulator of inflammation and fibrosis after MI (please see Cardiovasc Res, 2016;112:645–655). Given the overlap between the authors’ findings and Wnt-regulated processes, this omission limits the mechanistic depth of the study. The authors should analyze canonical Wnt pathway activation using their existing RNA-seq dataset (i.e.: KEGG/GSEA enrichment or marker gene expression such as CTNNB1, AXIN2, LRP6, TCF7L2) to strengthen the biological interpretation. Finally, they should discuss the results in the light of abovementioned study.

2) The authors should complete the histological characterization of hallmarks of myocardial remodeling in the border and remote regions (i.e.: cardiomyocyte apoptosis, cardiomyocyte size, interstitial and perivascular fibrosis, capillary and arteriolar density).

3) The authors focused on male rats. This shold be highlighted in the title. Moreover, they should discuss the lack of female rats as a limitation of the study.

4) Add data on body weight and heart weight/body weight ratio, ejection fraction and LV diastolic function.

5) The authors should add RNA-seq dataset as supplementary file.

6) The authors should clarify data showed in Fig.4. In particular, the impact of genes allocated in Cluster 1. Indeed, previous studies on myocardial metabolism hase demonstrated the role of CPT1 and fatty acid metabolism in modulating contractile response and remodeling (please see Cardiovasc Res. 2005 Jun 1;66(3):454-61.; Nature 622, 619–626 (2023))

7) Figure legend should include the statistical analysis used for the showed data.

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Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Is the manuscript technically sound, and do the data support the conclusions?

Reviewer #1: Partly

Reviewer #2: Partly

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2. Has the statistical analysis been performed appropriately and rigorously? -->?>

Reviewer #1: Yes

Reviewer #2: No

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3. Have the authors made all data underlying the findings in their manuscript fully available??>

The PLOS Data policy

Reviewer #1: Yes

Reviewer #2: Yes

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4. Is the manuscript presented in an intelligible fashion and written in standard English??>

Reviewer #1: Yes

Reviewer #2: Yes

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Reviewer #1: The manuscript entitled “Attenuating effects of inflammatory pathway by prolonged left ventricular unloading after myocardial infarction in rats” is a preclinical assessment of unloading in the setting AMI (LAD ligation) using a heterotopic heart-lung transplant model for partial unloading to determine inflammatory signaling. The primary finding is that partial unloading exerts effects on inflammatory gene expression and macrophage polarization. It is then suggested that inflammatory modulation might be mechanistically related to the cardioprotective effects of mechanical unloading. The manuscript is well-written, the topic is clinically relevant, and the analysis is robust however I have a few concerns that I think should be addressed.

My major concern is regarding the partial unloading model as well as the lack of adjudication of infarct size done in any of the animals. In Fig 2B, it appears that fibrosis was elevated in the unloaded animals compared to AMI. How was fibrosis quantified? This is not described in the methods. As far as the other cardiac functional parameters described in Figure 2, I do not see any major statistical differences between the AMI and AMI/UL animals, which makes me wonder about the degree of unloading and if this was significant enough to unmask inflammatory changes that would be expected with a transvalvular flow pump (as would be delivered in humans). Additionally, the claim that “Partial UL attenuates deterioration of cardiac function after AMI but exerts” needs to be restated, given that the functional data does not suggest any relative improvement in cardiac function with partial UL. There are also multiple mentions of the cardioprotective effects of unloading, however I do not see that infarct size was quantified in this study. Was TTC staining done? Or at least quantification of histologic scar area? Indeed, if infarct size were lower in the partial unloading arm, it would be expected that their cardiac functional parameters would also be different than the non-unloaded AMI patients.

Methods – How were areas defined - “remote region,” “non-infarcted area,” and “viable myocardium” are all used. This needs to be more clearly laid out in the methods (what samples were taken and where). Was sampling from remote areas standardized?

Methods – it appears that a two -way ANOVA was used to compare the 4 groups. However, I think I would consider utilizing the 3 groups (control, AMI, AMI/UL) as the results would be more clinically relevant. There is no biologic basis for using UL without an inciting event nor is it an appropriate control/sham arm either.

QUANTISEQ – it seems that this package was used for rat myocardium, however this is a computational pipeline from human RNQ-seq data. Please clarify this point, which is not mentioned in the manuscript.

Figure 1 – needs more descriptive legend. What do the white and black bars represent?

“Several studies have demonstrated that UL can reduce infarct size, preserve cardiac function, and modulate myocardial metabolic stress when initiated during ischemia or at the time of reperfusion [6-8]. Based on these findings, UL has been increasingly applied in clinical settings, such as the percutaneous Impella device [9, 10].” – Would rephrase this. UL for the purpose of cardioprotection is only investigational at the current time. The Door-to-Unload pivotal trial results investigating the use of Impella CP at the time of AMI (STEMI) have not been released. Otherwise, placing a mechanical circulatory support device (IABP or ECMO) at the time of AMI for the purpose of cardioprotection have both been investigated in randomized studies (CRISP-AMI and ECLS-SHOCK) but with negative results. UL has been increasingly utilized for cardiogenic shock and high risk PCI, however this is only to provide hemodynamic support and not to reduce infarct size. Would scale back these claims.

Reviewer #2: The manuscript examines the effects of prolonged partial left ventricular unloading (UL) on inflammation after acute myocardial infarction (AMI) in rats. It explores the impact of UL on inflammatory pathways, immune cell behavior, and macrophage polarization in non-infarcted myocardium. Through RNA sequencing, immune cell deconvolution, qPCR, and immunohistochemistry, the study reveals that UL reduces cardiac functional decline, inflammation, and M2 macrophage accumulation following AMI.

The emphasis on the remote area is a notable strength of the manuscript since most literature concentrates on the infarct zone and the border zone. However, there are significant concerns that require the authors' attention.

1. The functional and histopathological data presented are remarkably similar to those recently published by the authors in another paper (Int. J. Mol. Sci. 2025, 26, 4422. https://doi.org/10.3390/ijms26094422), which raises concerns about the originality of the findings. The authors should address and discuss this issue.

2. In studies involving vertebrates, it is essential to evaluate animal welfare and clearly define experimental endpoints. Methods should be reported in detail with transparency. Information and details unsuitable for the main manuscript can be included as supplementary material. Was the infarction induction via LAD ligation and heterotopic heart-lung transplantation contextual? Were the donor and recipient rats syngeneic? What precautions, if any, were taken to minimize rejection risk? Did the animals receive prophylactic or post-surgical treatments? What type of anesthesia was used during echocardiographic imaging sessions?

3. Given the small sample size of the groups and the high variability of many parameters analyzed, a non-parametric statistical analysis would probably be more appropriate.

4. I acknowledge that comparing ultrasound results between UL and non-UL is impractical due to the differing hemodynamic conditions involved. This issue likely renders the statistical analysis presented in the table rather meaningless.

5. The presentation of results often appears biased, as it fails to address the impact of heterotopic heart–lung transplantation. For instance, the rate of fibrosis in UL samples must be considered, regardless of AMI, along with the increase in some cytokines.

6. In the RNAseq data, there appears some variability among the AMI groups with and without UL. What are the characteristics of these animals regarding the uniformity of infarct size and, at least for those without UL, also concerning ultrasound-derived cardiac function parameters?

7. In Figure 5, examining the histograms, 5 out of 11 genes show increased expression after AMI. I believe it is significant that UL alone causes an increase in expression, and that it is then minimally affected by AMI. A discussion on this point by the authors is requested. Furthermore, I find it confusing to use those colors to indicate the noUL and UL groups, especially since those colors also represent the z-score in the heatmaps (which is, incidentally, on the y-axis).

8. The use of deconvolution tools in non-tumor samples has been employed, often with similar results. However, it requires careful interpretation of fractions in normal or mixed tissues when tumor populations are absent. The authors are encouraged to address this issue.

9. Figure 8 shows quantitative analysis of iNOS immunohistochemistry data to represent M1 class of macrophages, but does not include any representative micrograph.

10. The idea that inflammation following an acute myocardial infarction (AMI) extends beyond the infarcted area into non-infarcted regions—and that this may contribute to global ventricular function impairment and remodeling—is a significant yet relatively novel concept in cardiology. However, it is not original. Several studies, both in relevant preclinical models and in humans, appear to have established this connection. An illustrative example is the study titled "Inflammation in Remote Myocardium and Left Ventricular Remodeling After Acute Myocardial Infarction: A Pilot Study Using T2 Mapping." You can find it at the following link: https://doi.org/10.1002/jmri.27827.

11. The conclusion presented in the abstract appears to contradict the conclusion found in the main text. The abstract states that partial unloading (UL) attenuates the deterioration of cardiac function but has limited effects on inflammatory gene expression and macrophage polarization in the non-infarcted area. This suggests that the cardioprotective effect is only partially linked to inflammation in the remote area, with complex influences stemming from fibrosis and atrophy. In contrast, the second paragraph claims that partial UL significantly affects inflammatory gene expression and macrophage polarization in the remote area, implying that cardiac protection results from a more pronounced modulation of inflammatory pathways in that region. The authors need to address this issue.

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Reviewer #2: No

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PLoS One. 2026 Feb 26;21(2):e0343702. doi: 10.1371/journal.pone.0343702.r002

Author response to Decision Letter 1


7 Jan 2026

Responses to the additional editor comments:

First of all, we sincerely thank the editor for all the valuable comments to improve our manuscript.

Comments to the Authors:

1) The manuscript provides valuable insights into post-infarction remodeling and the effects of LV unloading but fails to consider the potential involvement of the canonical Wnt/β-catenin pathway, a key regulator of inflammation and fibrosis after MI (please see Cardiovasc Res, 2016;112:645–655). Given the overlap between the authors’ findings and Wnt-regulated processes, this omission limits the mechanistic depth of the study. The authors should analyze canonical Wnt pathway activation using their existing RNA-seq dataset (i.e.: KEGG/GSEA enrichment or marker gene expression such as CTNNB1, AXIN2, LRP6, TCF7L2) to strengthen the biological interpretation. Finally, they should discuss the results in the light of abovementioned study.

Author’s response:

We appreciate the editor’s suggestion regarding canonical Wnt/β-catenin signaling. To address this point, we evaluated the related KEGG pathway in different groups from RNAseq, and Wnt/β-catenin signaling was not detected (see the figures below). Also, the expressions of four representative canonical Wnt markers (Ctnnb1, Axin2, Lrp6, Tcf7l2) were analyzed, and none of these genes showed significant differences among the four groups. Furthermore, no MI × unloading interaction was detected (Ctnnb1: p = 0.35, Axin2: p = 0.15, Lrp6: p = 0.90, Tcf7l2: p = 0.68).

These data suggest that canonical Wnt signaling is not prominently activated in the remote myocardium in this model, and therefore additional pathway-level analyses would likely not yield mechanistically informative results. Nevertheless, we have added a brief discussion on the potential relevance of Wnt signaling and its reported involvement in post-MI remodeling: “Canonical Wnt/β-catenin signaling has been implicated in post-MI inflammation and fibrotic remodeling in previous studies [20, 21]. However, in the present study, the expression of representative canonical Wnt markers (Ctnnb1, Axin2, Lrp6, and Tcf7l2, data not shown) was not significantly altered among groups, and no interaction between MI and unloading was detected. These data suggest that canonical Wnt activation was not prominent in the remote myocardium under our experimental conditions, and that the inflammatory modulation observed here may be governed by other signaling mechanisms.” (line 452-460).

Comments to the Authors:

2) The authors should complete the histological characterization of hallmarks of myocardial remodeling in the border and remote regions (i.e.: cardiomyocyte apoptosis, cardiomyocyte size, interstitial and perivascular fibrosis, capillary and arteriolar density).

Author’s response:

We appreciate the editor’s suggestion. We added cardiomyocyte size, interstitial and perivascular fibrosis analysis in the border zone (see Fig. S2, line 253-254). Cardiomyocyte apoptosis and capillary and arteriolar density were not assessed in the present study because their accurate evaluation requires specialized experimental approaches and marker-based histological methods, which were not included in the original study design. We have clarified this point as a limitation of the study: “Finally, we did not quantify infarct size, cardiomyocyte apoptosis, and capillary and arteriolar density in this study. Because only a single papillary-level section was collected per heart, and specialized staining is necessary, reliable estimation was not feasible” (line 526-532).

Comments to the Authors:

3) The authors focused on male rats. This should be highlighted in the title. Moreover, they should discuss the lack of female rats as a limitation of the study.

Author’s response:

We thank the editor for this comment. The current study used male rats to minimize variability associated with sex-specific hormonal cycles and because our primary aim was to characterize inflammatory and macrophage responses under defined experimental conditions. We have added male rats in the title and a statement in the limitations section acknowledging the lack of female animals and noting that future studies are warranted to determine whether the effects of unloading differ between sexes: “Third, only male rats were used, which may limit generalizability, and whether sex modifies the effects of unloading after MI should be evaluated in the future.” (line 525-526).

Comments to the Authors:

4) Add data on body weight and heart weight/body weight ratio, ejection fraction and LV diastolic function.

Author’s response:

We thank the editor for this suggestion. We have now included data on body weight, LV weight, and LV weight/body weight ratio in a new table (Supplementary Table S3.). These parameters are presented as mean ± SEM across the four experimental groups (non-AMI, AMI, non-AMI/UL, and AMI/UL). In addition, we have added the ejection fraction (EF) values by the Teichholz method at baseline and at 14 days post-surgery (Supplementary Table S4.). Diastolic function was not assessed due to little LV inflow in the UL group.

Comments to the Authors:

5) The authors should add RNA-seq dataset as supplementary file.

Author’s response:

We appreciate the editor’s recommendation. The RNA-seq dataset was deposited in a publicly accessible database, and the corresponding access link is included in the revised manuscript: “RNA-seq was performed by Takara Bio Inc. (Kanagawa, Japan), and the data were uploaded into Annotare 2.0 with an accession number of E-MTAB-16419.” (line 154-156).

Comments to the Authors:

6) The authors should clarify data showed in Fig.4. In particular, the impact of genes allocated in Cluster 1. Indeed, previous studies on myocardial metabolism have demonstrated the role of CPT1 and fatty acid metabolism in modulating contractile response and remodeling.

Author’s response:

We appreciate the editor’s comment. To address this point, we analyzed the expression of CPT1, CD36, and Fabp3 family genes within Cluster 1. We revised the explanation in the results: “Genes in cluster 1 were related to fatty acid metabolism, oxidative phosphorylation, adipogenesis, peroxisome, and bile acid metabolism. The expression of Cpt1b, CD36, and Fabp3, which are related to fatty acid metabolism, was significantly decreased after AMI. In cluster 2, the genes were mainly related to epithelial–mesenchymal transition, TNFα signaling via NF-κB, allograft rejection, inflammatory response, and IL-6–JAK–STAT3 signaling (Fig. 4B)”, (line 288-293).

Comments to the Authors:

7) Figure legend should include the statistical analysis used for the showed data.

Author’s response:

We thank the reviewer for this comment. We have revised the figure legends to include the statistical analysis used for each figure, including the type of statistical test, post-hoc comparisons (where applicable), and sample sizes. This information is now clearly stated in the legends for Figures.

Reviewer #1:

First of all, we sincerely thank the Reviewer #1 for all the valuable comments to improve our manuscript.

Comments to the Authors:

1) My major concern is regarding the partial unloading model as well as the lack of adjudication of infarct size done in any of the animals. In Fig 2B, it appears that fibrosis was elevated in the unloaded animals compared to AMI. How was fibrosis quantified? This is not described in the methods.

Author’s response:

We appreciate your valuable comments. We were unable to quantify infarct size in this study, as only a single papillary-level section was collected per heart. We also apologize for the lack of methodological detail in the previous version. We added this in the method section as follows: “Fixed LV tissue blocks were sectioned and stained with hematoxylin–eosin to assess myocyte morphology. Cardiomyocyte cross-sectional area was quantified in non-infarcted myocardium by measuring 100 randomly selected myocytes containing a visible central nucleus per animal. Areas were outlined and calculated using ImageJ (NIH, 1.54f, U.S. National Institutes of Health; Bethesda, MD, USA). Masson’s trichrome staining was employed to determine the extent of fibrosis. For each animal, ten random microscopic fields from the non-infarcted zone were imaged, and collagen-rich regions were segmented using threshold-based detection in ImageJ 1.54f. Fibrosis was expressed as the percentage of stained area relative to total tissue area, and mean values per animal were used in group-level analyses.” (line 139-149).

Comments to the Authors:

2) As far as the other cardiac functional parameters described in Figure 2, I do not see any major statistical differences between the AMI and AMI/UL animals, which makes me wonder about the degree of unloading and if this was significant enough to unmask inflammatory changes that would be expected with a transvalvular flow pump (as would be delivered in humans).

Author’s response:

We appreciate your valuable comments. AMI/UL was performed by heterotopic heart-lung transplantation after AMI; thus, it was unable to be directly compared with the AMI group, which did not receive transplantation. We try to solve this issue by adapting two-way ANOVA, with two other sham groups (non-AMI and non-AMI/UL), and we explain this in comment 5.

As you can see in Supplementary Table S4., 14 d LVEDD and LVESD were almost half of the values of baseline, which suggests a significant LV unloading.

Comments to the Authors:

3) Additionally, the claim that “Partial UL attenuates deterioration of cardiac function after AMI but exerts” needs to be restated, given that the functional data does not suggest any relative improvement in cardiac function with partial UL. There are also multiple mentions of the cardioprotective effects of unloading, however I do not see that infarct size was quantified in this study. Was TTC staining done? Or at least quantification of histologic scar area? Indeed, if infarct size were lower in the partial unloading arm, it would be expected that their cardiac functional parameters would also be different than the non-unloaded AMI patients.

Author’s response:

We thank the reviewer for this important comment. We agree that the original phrasing may have overstated the functional impact of unloading. In the revised manuscript, we stated as follows: “Partial UL suggests a potential influence on cardiac function after AMI but exerts effects on inflammatory gene expression and macrophage polarization in the non-infarcted area” (line 535-537). We are sorry that we were unable to quantify infarct size using the available samples. Because only a single papillary-level section was collected from each heart to evaluate the non-infarcted myocardium, quantifying infarct size from these samples would be biased and unreliable. Accurate assessment of infarct size requires serial sectioning throughout the ventricle or whole-heart TTC staining, which was not included in our experimental protocol. We acknowledge this limitation and have now stated it explicitly in the revised manuscript: “Future studies will incorporate serial histological sectioning or whole-heart TTC staining to accurately determine infarct size and evaluate whether unloading affects acute myocardial injury.” (line 529-532).

Comments to the Authors:

4) Methods – How were areas defined - “remote region,” “non-infarcted area,” and “viable myocardium” are all used. This needs to be more clearly laid out in the methods (what samples were taken and where). Was sampling from remote areas standardized?

Author’s response:

We apologize for the inconvenience. We revised the methods section and added the identification for the areas as follows: “The infarct area was identified as the macroscopically white region. The border area was defined as the area extending 3 mm from the infarct area to the free wall. The remaining zone was a remote area.” (line 134-136).

Comments to the Authors:

5) Methods – it appears that a two -way ANOVA was used to compare the 4 groups. However, I think I would consider utilizing the 3 groups (control, AMI, AMI/UL) as the results would be more clinically relevant. There is no biologic basis for using UL without an inciting event nor is it an appropriate control/sham arm either.

Author’s response:

We appreciate the reviewer’s suggestion. A direct comparison among only three groups (control, AMI, and AMI+UL) would not allow us to distinguish the intrinsic effects of unloading (UL) from its modulatory effect on AMI. Because in the AMI/UL group, UL is implemented via a transplantation-based model, it inevitably introduces biological effects independent of unloading, and therefore, it is inappropriate to compare AMI and AMI/UL groups directly.

For example, in experimental biology, a knockout (KO) model involves inactivating a specific gene to examine its function. KO studies commonly use a four-group design—wild-type controls, wild-type with acute myocardial infarction (AMI), KO controls, and KO with AMI—to test whether gene deletion modifies the response to AMI through evaluation of the interaction term. Analogously, in the present study, LV unloading (UL) was treated as the modifying factor, resulting in four experimental groups (non-AMI, AMI, non-AMI/UL, and AMI/UL). The data were analyzed using two-way ANOVA with AMI and UL as factors. This framework enables explicit evaluation of the interaction term, which directly tests whether UL modifies the biological response to AMI beyond its baseline effects. A significant interaction, therefore, addresses our primary biological question and avoids potentially misleading conclusions that could arise from pairwise comparisons alone. This approach is methodologically standard in genetic and pharmacological interaction studies and allows valid inference despite the unavoidable secondary effects associated with the UL model.

Comments to the Authors:

6) QUANTISEQ – it seems that this package was used for rat myocardium, however this is a computational pipeline from human RNQ-seq data. Please clarify this point, which is not mentioned in the manuscript.

Author’s response:

We thank the reviewer for pointing out an important methodological concern. We acknowledge that QUANTISEQ was originally developed and validated using human RNA-seq data, and we adopted it in this study because: (1) comparable deconvolution tools validated for rat cardiac tissue are currently lacking; (2) the bulk RNA-seq data from our rat myocardium were of high quality, and immune-cell infiltration and inflammatory changes were among our key hypotheses; (3) using a human-derived signature matrix represents an attempt to infer immune cell composition, under the assumption that many immune cell–specific marker genes are conserved across mammals. Nevertheless, we fully agree that this represents a limitation. Also, we performed immunostaining for macrophage markers, which confirmed increased M2 macrophage infiltration predicted by the computational analysis, providing independent support for this component of the RNA-seq findings. We added some explanation in the method section as follows: “Although QUANTISEQ was originally developed for human RNA-seq data, we applied it to rat myocardial RNA-seq because no rat-specific immune deconvolution pipelines are currently available and many immune-cell signature genes are evolutionarily conserved across species. We used the default human TIL10 signature matrix and performed deconvolution on normalized TPM data from our bulk RNA-seq.” (line 174-178).

Comments to the Authors:

7) Figure 1 – needs more descriptive legend. What do the white and black bars represent?

Author’s response:

We thank the reviewer for the comment. The legend for Figure 1 has been revised to provide clearer descriptions of the data presentation. Specifically, we now indicate what the white and black bars represent: “White bars denote periods without intervention; black bars represent periods with intervention (LAD ligation or unloading).” (line 109-111).

Comments to the Authors:

8) “Several studies have demonstrated that UL can reduce infarct size, preserve cardiac function, and modulate myocardial metabolic stress when initiated during isc

Attachment

Submitted filename: Response to Reviewers.docx

pone.0343702.s004.docx (525.3KB, docx)

Decision Letter 1

Vincenzo Lionetti

26 Jan 2026

Dear Dr. Shingu,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

==============================

ACADEMIC EDITOR: Despite some efforts by the authors, relevant issues need to be solved in accord with Editor's and Reviewers' suggestions. These issues are required.

==============================

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Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

Reviewer #2: (No Response)

**********

2. Is the manuscript technically sound, and do the data support the conclusions??>

Reviewer #2: Yes

**********

3. Has the statistical analysis been performed appropriately and rigorously? -->?>

Reviewer #2: Yes

**********

4. Have the authors made all data underlying the findings in their manuscript fully available??>

The PLOS Data policy

Reviewer #2: Yes

**********

5. Is the manuscript presented in an intelligible fashion and written in standard English??>

Reviewer #2: Yes

**********

Reviewer #2: 1. Even after the authors' response to the matter, which I consider only partially satisfactory, I continue to believe that estimating infarct size would have given the results greater weight and perhaps even dispelled some doubts about the infarct's outcome and the variability between the groups. At least macroscopic morphometry of the infarcted region in fresh tissue (preferably, though not necessarily, using TTC), given that the authors identified it as the "white region." This limitation affects the manuscript's overall impact.

2. In Table S4, ESD unexpectedly decreased by about 40% from baseline at 14 days post-AMI in non-unloaded rats, in contrast to the typical progressive dilation. This atypical pattern alongside EDD changes requires methodological verification and discussion.

3. The authors' response to my comment #7 is partially satisfactory for the following reasons: a) Dismissing the confusion regarding the color scheme as "automatically generated and uneditable" is unconvincing. A good scientific publication requires clear visualizations controlled by the authors, where effective scientific communication takes precedence over software limitations. b) Despite the reviewer's explicit request, there is no discussion paragraph that addresses the biological significance of the effects of UL/surgery on these genes, leaving a crucial observation unexplained.

4. The "major concern" regarding the partial unloading model—specifically mentioned in my comment #5 and reviewer #1's comment #1—has not been addressed. There is no explanation provided for model validation, unloading efficacy metrics, or the rationale for the unexpected increase in fibrosis in the unloaded groups compared to the AMI groups. This is counterintuitive, given that the intent of unloading is to have an anti-fibrotic effect.

**********

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Reviewer #2: No

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PLoS One. 2026 Feb 26;21(2):e0343702. doi: 10.1371/journal.pone.0343702.r004

Author response to Decision Letter 2


2 Feb 2026

Reviewer #2:

First of all, we sincerely thank Reviewer #2 for all the valuable comments to improve our manuscript.

Comments to the Authors:

1. Even after the authors' response to the matter, which I consider only partially satisfactory, I continue to believe that estimating infarct size would have given the results greater weight and perhaps even dispelled some doubts about the infarct's outcome and the variability between the groups. At least macroscopic morphometry of the infarcted region in fresh tissue (preferably, though not necessarily, using TTC), given that the authors identified it as the "white region." This limitation affects the manuscript's overall impact.

Author’s response:

We thank the reviewer for the comment. To address this concern, we attempted to use Masson’s trichrome staining to estimate the fibrotic area in the UL groups. However, in AMI/UL samples, intraventricular thrombus was present and tightly attached to the infarcted myocardium. Since both collagen-rich infarct tissue and thrombus are stained blue by Masson’s trichrome, it was not possible to reliably distinguish the infarct core from the thrombus or surrounding tissue. Therefore, accurate and reproducible delineation of infarct borders could not be achieved.

Regarding TTC staining, as the reviewer mentioned, fresh tissue is required. Since all samples in the present study had already been collected and processed for downstream molecular and histological analyses, TTC staining could not be retrospectively performed. Even if the AMI and UL surgeries were repeated, the newly obtained samples would not be directly comparable to those used in the current experiments. Therefore, TTC staining was not pursued in this study and the present results are based on the existing experimental dataset.

Comments to the Authors:

2. In Table S4, ESD unexpectedly decreased by about 40% from baseline at 14 days post-AMI in non-unloaded rats, in contrast to the typical progressive dilation. This atypical pattern alongside EDD changes requires methodological verification and discussion.

Author’s response:

We sincerely thank the reviewer for this careful observation, and we apologize for the confusion caused by an error in Table S4. After receiving this comment, we rechecked our laboratory records and confirmed that the LVESD values at day 14 in all groups had been transcribed incorrectly. Specifically, during data transfer to the spreadsheet, a wall thickness parameter was mistakenly entered in place of LVESD, which artificially produced an apparent decrease in ESD after AMI. We have now corrected the LVESD dataset using the original measurement files, updated Table S4 accordingly, and re-ran all downstream calculations and statistical analyses that used these values (including EDD/ESD-derived indices). With the corrected data, the post-AMI pattern is consistent with expected ventricular remodeling, and the atypical ESD decrease is no longer present.

Comments to the Authors:

3. The authors' response to my comment #7 is partially satisfactory for the following reasons: a) Dismissing the confusion regarding the color scheme as "automatically generated and uneditable" is unconvincing. A good scientific publication requires clear visualizations controlled by the authors, where effective scientific communication takes precedence over software limitations. b) Despite the reviewer's explicit request, there is no discussion paragraph that addresses the biological significance of the effects of UL/surgery on these genes, leaving a crucial observation unexplained.

Author’s response:

We thank the reviewer for this comment.

a) In the revised manuscript, we have adjusted the color scheme of the MultiDEG figure (Fig. 5A) to improve clarity and to make it clearly distinguishable from Fig. 4B.

b) In addition, we have added a new paragraph in the Discussion section to address the biological significance of the effects of UL/surgery on these genes. “Among these inflammation-related hub genes, Il1r2, Il2ra, and RT1-Db1 exhibited significant AMI × UL interaction effects, suggesting that their expression is specifically modulated by UL in post infarction. Notably, previous clinical evidence has shown that circulating Il1r2 levels in patients with myocardial infarction are independently associated with parameters of adverse left ventricular remodeling [20]. In our study, UL alone caused an increase in Il1r2 expression, and it was minimally affected by AMI. Thus, the suppression of Il1r2 in the AMI/UL group may possibly reflect a shift in inflammatory signaling toward a transcriptional profile associated with less adverse remodeling, although causality cannot be inferred from the present data. No studies have directly linked Il2ra or RT1-Db1 to AMI or mechanical unloading. Therefore, our data provide novel evidence that ventricular UL modulates inflammation-related gene programs in the remote myocardium after AMI, highlighting a previously underexplored interaction between UL and post-AMI inflammatory regulation.” (line 448-461).

Comments to the Authors:

4. The "major concern" regarding the partial unloading model—specifically mentioned in my comment #5 and reviewer #1's comment #1—has not been addressed. There is no explanation provided for model validation, unloading efficacy metrics, or the rationale for the unexpected increase in fibrosis in the unloaded groups compared to the AMI groups. This is counterintuitive, given that the intent of unloading is to have an anti-fibrotic effect.

Author’s response:

We appreciate the reviewer’s concern regarding the validation of the partial unloading model. The model validation and unloading efficacy have been demonstrated by the echocardiographic parameters, as described in question 2 (supplementary table S4), which confirm the effective reduction of mechanical LV load in the UL groups.

We would like to clarify that the fibrosis data presented in this study represent interstitial fibrosis in the remote LV myocardium, rather than fibrosis within the infarct zone or global myocardial fibrosis. Therefore, these results should not be interpreted as infarct size or total scar formation. In the present experimental setting, accurate quantification of fibrosis within the infarct region was not feasible due to the presence of intraventricular thrombus and hemorrhagic components, which were co-stained with collagen in Masson’s trichrome sections, as explained in question #1.

In addition, there have been studies reporting that fibrosis increased after LV unloading. Bello SO et al. performed unloading in a rat AMI model, and the results showed that fibrosis increased in the UL group (Bello SO et al., Mechanical unloading coupled with coronary reperfusion stimulates cardiomyocyte proliferation and prevents unloading-induced fibrosis after myocardial infarction. Basic Res Cardiol. 2025). In a study using patient data after LVAD, it was also reported that LVAD support increases LV collagen cross-linking and the ratio of collagen type I to III, as well as myocardial stiffness (Klotz S et al., Mechanical unloading during left ventricular assist device support increases left ventricular collagen cross-linking and myocardial stiffness. Circulation. 2005).

Attachment

Submitted filename: Response 2.docx

pone.0343702.s005.docx (3.3MB, docx)

Decision Letter 2

Vincenzo Lionetti

8 Feb 2026

Dear Dr. Shingu,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

==============================

ACADEMIC EDITOR: The authors shoul edit reference #21 in accord with Editor's suggestion ==============================

Please submit your revised manuscript by Mar 25 2026 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org . When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

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If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols . Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols .

We look forward to receiving your revised manuscript.

Kind regards,

Vincenzo Lionetti, M.D., PhD

Academic Editor

PLOS One

Journal Requirements:

1. If the reviewer comments include a recommendation to cite specific previously published works, please review and evaluate these publications to determine whether they are relevant and should be cited. There is no requirement to cite these works unless the editor has indicated otherwise.

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Additional Editor Comments:

Reference #21 is not appropriated. Regarding the relationship between Wnt and MI the suggested reference was Cardiovasc Res. 2016 Dec;112(3):645-655. doi: 10.1093/cvr/cvw214.  Please edit.

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Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

Reviewer #2: All comments have been addressed

**********

2. Is the manuscript technically sound, and do the data support the conclusions??>

Reviewer #2: (No Response)

**********

3. Has the statistical analysis been performed appropriately and rigorously? -->?>

Reviewer #2: (No Response)

**********

4. Have the authors made all data underlying the findings in their manuscript fully available??>

The PLOS Data policy

Reviewer #2: (No Response)

**********

5. Is the manuscript presented in an intelligible fashion and written in standard English??>

Reviewer #2: (No Response)

**********

Reviewer #2: The authors have adequately addressed my comments raised in a previous round of review. The manuscript is now improved.

**********

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Reviewer #2: No

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PLoS One. 2026 Feb 26;21(2):e0343702. doi: 10.1371/journal.pone.0343702.r006

Author response to Decision Letter 3


8 Feb 2026

Additional Editor Comments:

First of all, we sincerely thank the editor for the valuable comment to improve our manuscript.

1. Reference #21 is not appropriate. Regarding the relationship between Wnt and MI the suggested reference was Cardiovasc Res. 2016 Dec;112(3):645-655. doi: 10.1093/cvr/cvw214. Please edit.

Author’s response:

We thank the editor for the comment. We apologize for any inconvenience. We have revised the reference.

Attachment

Submitted filename: Response 3.docx

pone.0343702.s006.docx (17.5KB, docx)

Decision Letter 3

Vincenzo Lionetti

10 Feb 2026

Attenuating effects of inflammatory pathway by prolonged left ventricular unloading after myocardial infarction in male rats

PONE-D-25-55622R3

Dear Dr. Shingu,

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Acceptance letter

Vincenzo Lionetti

PONE-D-25-55622R3

PLOS One

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Associated Data

    This section collects any data citations, data availability statements, or supplementary materials included in this article.

    Supplementary Materials

    S1 File. Normality test for the parameters, cardiac myocyte size and fibrosis in the border zone 14 days after surgery, differential gene expression analysis between groups, and macrophage polarization in infarct areas and border zones.

    (DOCX)

    pone.0343702.s001.docx (2.3MB, docx)
    S2 File. Composition of the Krebs-Henseleit buffer, sequences of the primers and probes, body weight, LV weight, LV/body weight after 14 days, and echocardiographic parameters.

    (DOCX)

    pone.0343702.s002.docx (24.5KB, docx)
    Attachment

    Submitted filename: Response to Reviewers.docx

    pone.0343702.s004.docx (525.3KB, docx)
    Attachment

    Submitted filename: Response 2.docx

    pone.0343702.s005.docx (3.3MB, docx)
    Attachment

    Submitted filename: Response 3.docx

    pone.0343702.s006.docx (17.5KB, docx)

    Data Availability Statement

    All RNA-seq files are available from the ArrayExpress database (accession number(s) E-MTAB-16419).


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