Abstract
The unfolding and refolding of apohorseradish peroxidase, as a function of guanidinium chloride concentration, were monitored by the intrinsic fluorescence intensity, polarization, and lifetime of the single tryptophan residue. The unfolding was reversible and characterized by at least three distinct stages-the intensity and lifetime data, for example, were both characterized by an initial increase followed by a decrease and then a plateau region. The lifetime data, in the absence and presence of guanidinium chloride, were heterogeneous and fit best to a model consisting of a major Gaussian distribution component and a minor, short discrete component. The observed increase in intensity in the initial stage of the unfolding process is attributed to the conversion of this short component into the longer, distributed component as the guanidinium chloride concentration increases. Our results clarify and amplify previous studies on the unfolding of apohorseradish peroxidase by guanidinium chloride.
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- Alcala J. R., Gratton E., Prendergast F. G. Fluorescence lifetime distributions in proteins. Biophys J. 1987 Apr;51(4):597–604. doi: 10.1016/S0006-3495(87)83384-2. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Alcala J. R., Gratton E., Prendergast F. G. Interpretation of fluorescence decays in proteins using continuous lifetime distributions. Biophys J. 1987 Jun;51(6):925–936. doi: 10.1016/S0006-3495(87)83420-3. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Alcala J. R., Gratton E., Prendergast F. G. Resolvability of fluorescence lifetime distributions using phase fluorometry. Biophys J. 1987 Apr;51(4):587–596. doi: 10.1016/S0006-3495(87)83383-0. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Bartonek-Roxå E., Eriksson H. Expression of a neutral horseradish peroxidase in Escherichia coli. J Biotechnol. 1994 Sep 30;37(2):133–142. doi: 10.1016/0168-1656(94)90004-3. [DOI] [PubMed] [Google Scholar]
- Bartonek-Roxå E., Eriksson H., Mattiasson B. The cDNA sequence of a neutral horseradish peroxidase. Biochim Biophys Acta. 1991 Feb 16;1088(2):245–250. doi: 10.1016/0167-4781(91)90060-y. [DOI] [PubMed] [Google Scholar]
- Bismuto E., Gratton E., Irace G. Effect of unfolding on the tryptophanyl fluorescence lifetime distribution in apomyoglobin. Biochemistry. 1988 Mar 22;27(6):2132–2136. doi: 10.1021/bi00406a047. [DOI] [PubMed] [Google Scholar]
- Brunet J. E., Gonzalez G. A., Sotomayor C. P. Intramolecular tryptophan heme energy transfer in horseradish peroxidase. Photochem Photobiol. 1983 Aug;38(2):253–254. doi: 10.1111/j.1751-1097.1983.tb03871.x. [DOI] [PubMed] [Google Scholar]
- Brunet J. E., Pulgar M. Dynamics of protoporphyrin IX in the heme pocket of horseradish peroxidase. Biochim Biophys Acta. 1993 Nov 10;1203(1):171–174. doi: 10.1016/0167-4838(93)90053-t. [DOI] [PubMed] [Google Scholar]
- Brunet J. E., Vargas V., Gratton E., Jameson D. M. Hydrodynamics of horseradish peroxidase revealed by global analysis of multiple fluorescence probes. Biophys J. 1994 Feb;66(2 Pt 1):446–453. doi: 10.1016/s0006-3495(94)80796-9. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Clarke J., Shannon L. M. The isolation and characterization of the glycopeptides from horseradish peroxidase isoenzyme C. Biochim Biophys Acta. 1976 Apr 14;427(2):428–442. doi: 10.1016/0005-2795(76)90186-0. [DOI] [PubMed] [Google Scholar]
- Das T. K., Mazumdar S. pH-induced conformational perturbation in horseradish peroxidase. Picosecond tryptophan fluorescence studies on native and cyanide-modified enzymes. Eur J Biochem. 1995 Feb 1;227(3):823–828. doi: 10.1111/j.1432-1033.1995.tb20207.x. [DOI] [PubMed] [Google Scholar]
- Eftink M. R. The use of fluorescence methods to monitor unfolding transitions in proteins. Biophys J. 1994 Feb;66(2 Pt 1):482–501. doi: 10.1016/s0006-3495(94)80799-4. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Gratton E., Jameson D. M., Hall R. D. Multifrequency phase and modulation fluorometry. Annu Rev Biophys Bioeng. 1984;13:105–124. doi: 10.1146/annurev.bb.13.060184.000541. [DOI] [PubMed] [Google Scholar]
- Hartmann C., Ortiz de Montellano P. R. Baculovirus expression and characterization of catalytically active horseradish peroxidase. Arch Biochem Biophys. 1992 Aug 15;297(1):61–72. doi: 10.1016/0003-9861(92)90641-9. [DOI] [PubMed] [Google Scholar]
- James E., Wu P. G., Stites W., Brand L. Compact denatured state of a staphylococcal nuclease mutant by guanidinium as determined by resonance energy transfer. Biochemistry. 1992 Oct 27;31(42):10217–10225. doi: 10.1021/bi00157a008. [DOI] [PubMed] [Google Scholar]
- Jiskoot W., Hlady V., Naleway J. J., Herron J. N. Application of fluorescence spectroscopy for determining the structure and function of proteins. Pharm Biotechnol. 1995;7:1–63. doi: 10.1007/978-1-4899-1079-0_1. [DOI] [PubMed] [Google Scholar]
- Jullian C., Brunet J. E., Thomas V., Jameson D. M. Time-resolved fluorescence studies on protoporphyrin IX-apohorseradish peroxidase. Biochim Biophys Acta. 1989 Aug 31;997(3):206–210. doi: 10.1016/0167-4838(89)90188-x. [DOI] [PubMed] [Google Scholar]
- Mei G., Rosato N., Silva N., Jr, Rusch R., Gratton E., Savini I., Finazzi-Agrò A. Denaturation of human Cu/Zn superoxide dismutase by guanidine hydrochloride: a dynamic fluorescence study. Biochemistry. 1992 Aug 18;31(32):7224–7230. doi: 10.1021/bi00147a003. [DOI] [PubMed] [Google Scholar]
- Moosavi-Movahedi A. A., Nazari K. Denaturation of horseradish peroxidase with urea and guanidine hydrochloride. Int J Biol Macromol. 1995 Feb;17(1):43–47. doi: 10.1016/0141-8130(95)93517-2. [DOI] [PubMed] [Google Scholar]
- Ohlsson P. I., Horie T., Vanderkooi J. M., Paul K. G. Tryptophan in horseradish peroxidase. Acta Chem Scand B. 1986 Apr;40(4):257–261. doi: 10.3891/acta.chem.scand.40b-0257. [DOI] [PubMed] [Google Scholar]
- Pappa H. S., Cass A. E. A step towards understanding the folding mechanism of horseradish peroxidase. Tryptophan fluorescence and circular dichroism equilibrium studies. Eur J Biochem. 1993 Feb 15;212(1):227–235. doi: 10.1111/j.1432-1033.1993.tb17654.x. [DOI] [PubMed] [Google Scholar]
- Shannon L. M., Kay E., Lew J. Y. Peroxidase isozymes from horseradish roots. I. Isolation and physical properties. J Biol Chem. 1966 May 10;241(9):2166–2172. [PubMed] [Google Scholar]
- Smith A. T., Santama N., Dacey S., Edwards M., Bray R. C., Thorneley R. N., Burke J. F. Expression of a synthetic gene for horseradish peroxidase C in Escherichia coli and folding and activation of the recombinant enzyme with Ca2+ and heme. J Biol Chem. 1990 Aug 5;265(22):13335–13343. [PubMed] [Google Scholar]
- TEALE F. W. Cleavage of the haem-protein link by acid methylethylketone. Biochim Biophys Acta. 1959 Oct;35:543–543. doi: 10.1016/0006-3002(59)90407-x. [DOI] [PubMed] [Google Scholar]
- Tamura M., Asakura T., Yonetani T. Heme-modification studies on horseradish peroxidase. Biochim Biophys Acta. 1972 May 12;268(2):292–304. doi: 10.1016/0005-2744(72)90324-5. [DOI] [PubMed] [Google Scholar]
- Ugarova N. N., Savitski A. P., Berezin I. V. The protoporphyrin-apoperoxidase complex as a horseradish peroxidase analog. A fluorimetric study of the heme pocket. Biochim Biophys Acta. 1981 Dec 15;662(2):210–219. doi: 10.1016/0005-2744(81)90032-2. [DOI] [PubMed] [Google Scholar]
- Vargas V., Brunet J. E., Jameson D. M. Oxygen diffusion near the heme binding site of horseradish peroxidase. Biochem Biophys Res Commun. 1991 Jul 15;178(1):104–109. doi: 10.1016/0006-291x(91)91785-b. [DOI] [PubMed] [Google Scholar]
- WEBER G. Fluorescence-polarization spectrum and electronic-energy transfer in proteins. Biochem J. 1960 May;75:345–352. doi: 10.1042/bj0750345. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Watanabe F., Jameson D. M., Uyeda K. Enzymatic and fluorescence studies of four single-tryptophan mutants of rat testis fructose 6-phosphate,2-kinase:fructose 2,6-bisphosphatase. Protein Sci. 1996 May;5(5):904–913. doi: 10.1002/pro.5560050512. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Welinder K. G. Amino acid sequence studies of horseradish peroxidase. Amino and carboxyl termini, cyanogen bromide and tryptic fragments, the complete sequence, and some structural characteristics of horseradish peroxidase C. Eur J Biochem. 1979 Jun 1;96(3):483–502. doi: 10.1111/j.1432-1033.1979.tb13061.x. [DOI] [PubMed] [Google Scholar]
- Welinder K. G. Plant peroxidases. Their primary, secondary and tertiary structures, and relation to cytochrome c peroxidase. Eur J Biochem. 1985 Sep 16;151(3):497–504. doi: 10.1111/j.1432-1033.1985.tb09129.x. [DOI] [PubMed] [Google Scholar]