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. 2026 May 22;72:101770. doi: 10.1016/j.nmni.2026.101770

Molecular investigation of Bartonella infection among immunocompromised patients in Iran

Zahra Tahmasebi Ashtiani a,b,1, Malihe Hasannezhad c,d,1, Mina Latifian a,b, Ladan Abbasian d,e, Arash Kalantari f, Fereshteh Ghaisvand g,h, Mohsen Meidani h, Zahra Ahmadinejad g, Mohammad Reza Khatami i, Fahimeh Bagheri Amiri a,, Saber Esmaeili a,b
PMCID: PMC13226849  PMID: 42238847

Abstract

Background

Bartonella infections are emerging zoonotic pathogens, primarily transmitted through arthropod vectors or direct contact with animals. Immunocompromised individuals are at increased risk of developing severe complications.

Methods

In this cross-sectional study, a total of 370 blood samples were collected from immunocompromised individuals including patients with HIV, AIDS, common variable immunodeficiency (CVID), liver and kidney transplant recipients, and a control group in Imam Khomeini Hospital in Tehran from May 2024 to February 2025.

Result

Overall, Bartonella spp. were detected in 7 out of 370 participants (1.89%). All positive cases were among HIV+ (2.8) and AIDS patients (3.9%). Phylogenetic analysis identified all isolates as Bartonella quintana. Univariate analysis suggested that a history of drug abuse and flea infestation seemed to be associated with infection, but due to the rarity of events, multivariate penalized logistic regression did not confirm these as independent risk factors. Cautious interpretation is warranted.

Conclusion

This study provides the first molecular evidence of Bartonella quintana infection among immunocompromised patients in Iran, with a notable prevalence observed in HIV-infected individuals, highlighting the need for increased clinical awareness in this population.

Keywords: Bartonella, Bartonellosis, Immunocompromised, HIV/AIDS

Highlights

  • Bartonella infection is detected exclusively among HIV-infected individuals, with no cases in other immunocompromised groups or controls.

  • All positive samples are identified as Bartonella quintana and cluster within the same phylogenetic clade based on 16S rRNA sequencing.

  • Illicit drug use, low educational level, and recent ectoparasite infestation are significant risk factors for Bartonella infection in HIV-positive patients.

1. Introduction

Bartonella is a Gram-negative, intracellular, and emerging zoonotic pathogen that can be transmitted through arthropod vectors or via animal bites or scratches. To date, more than 50 Bartonella species have been identified in wild and domestic animals, at least 18 of which have been associated with human infections [1]. Notable pathogenic species include Bartonella henselae, Bartonella quintana and Bartonella bacilliformis [2]. Bartonellosis is characterized by intraerythrocytic bacteremia and affects a broad of hosts, including humans, cats, dogs, rodents, and various domestic and wild animals [3]. Multiple arthropod vectors such as fleas, ticks, lice, and sand flies are involved in the transmission of Bartonella spp [4].

In humans, bartonellosis often presents with mild symptoms but can occasionally progress to a severe or life-threatening disease. Clinical manifestations may occur in both immunocompromised and immunocompetent individuals even in the absence of identifiable risk factors [5,6]. Severe cases have been associated with complications such as endocarditis, and neuroretinitis [7]. Various Bartonella species are responsible for several human diseases, including cat-scratch disease (B. henselae), Carrion's disease (B. bacilliformis), and trench fever (B. quintana). Additionally, both B. quintana and B. henselae have been implicated in endocarditis, bacillary angiomatosis, and hepatic peliosis [8].

Although Bartonella infection occurs in the general population, certain groups remain at substantially higher risk. These include individuals with immunodeficiency disorders, cancer patients, people living with HIV/AIDS, organ transplant recipients, intravenous drug users (IVDUs), homeless individuals, and cat owners [9]. In immunocompromised patients, particularly those with AIDS, B. henselae and B. quintana may lead to severe complications such as bacillary angiomatosis (BA) and peliosis hepatis. Importantly, Bartonella species can persist within erythrocytes for prolonged periods, resulting in chronic or relapsing infections [10]. In 2023, the number of people living with HIV in Iran was estimated at 43,000 (range: 30,000–77,000), of whom only about 24,000 were diagnosed and registered. Among those aware of their HIV status, 71.5% were receiving antiretroviral therapy (ART), and of those on ART who underwent viral load testing, about 92% achieved viral suppression [11].

Bartonellosis in transplant recipients may present with fever and lymphadenopathy making it difficult to distinguish from mycobacterial or fungal infections with similar clinical features [12]. Although treatable, diagnosis remain challenging especially in the absence of specific signs or when symptoms are overlooked. Moreover infection with B. quintana can manifest with wide range of nonspecific symptoms necessitating careful clinical evaluation to ensure timely diagnosis [13,14].

In Iran, studies on Bartonella infections in high-risk populations have primarily focused on patient with culture-negative endocarditis [15,16]. Additionally, the first documented case of bacillary angiomatosis caused by B. quintana in an HIV-positive patient in Iran was reported as a case study [17]. Given the lack of comprehensive epidemiological data regarding Bartonella infections in immunocompromised populations, this study aims to determine the molecular prevalence and species distribution of bartonellosis among immunocompromised individuals in Iran.

2. Methods

2.1. Ethical approval and informed consent

This study was approved by the Research Ethics Committee of Pasteur Institute of Iran (IR.PLL.REC.1402.010) and conducted in accordance with principles of the Declaration of Helsinki. All participants’ information was kept strictly confidential and anonymized prior to analysis. Written informed consent was obtained from all patient and controls prior to enrollment.

2.2. Study design and population

This cross-sectional study was conducted at Imam Khomeini Hospital from May 2024 to February 2025. Eligible immunocompromised participants were adults (>18 years old) with confirmed immunodeficiency including: I) HIV + group (without AIDS): Individuals with confirmed HIV infection and a CD4 count ≥200 cells/μL, with no history of an AIDS-defining illness, II) AIDS group: Individuals with confirmed HIV infection and a CD4 count <200 cells/μL, III) Patients with common variable immunodeficiency (CVID), and IV) liver and/or kidney transplant recipients. The control group was selected from >18 years old individuals who attended at hospital/laboratory for reasons unrelated to immunodeficiency (e.g., routine checkups or minor surgery). Participants were selected based on clinical records and confirmation of immunocompromised status by a specialist physician. A researcher-made questionnaire was administered to collect demographic and clinical information, including age, sex, city and place of residence, education level, history of drug use, alcohol use, homelessness, animal contact, underlying diseases (diabetic, blood pressure, Thyroid disorders and etc), and history of receiving blood and blood products, including plasma-derived products such as intravenous immunoglobulin (IVIG). A 5-ml venous blood sample was collected from each participant and transported under cold chain conditions to the Research Centre for Emerging and Reemerging Infectious Diseases at the Pasteur Institute of Iran for laboratory analysis.

2.3. Molecular investigation

Genomic DNA was extracted from all blood samples using a commercial blood DNA Extraction Kit (Viragene Co, Iran) following the manufacturer's instructions. Extracted DNA samples were stored at −20 °C until further testing.

Screening for Bartonella DNA was performed using quantitative PCR (qPCR) targeting the 16S–23S rRNA gene region. [18]. Each 20 -μl reaction mixture included 10 -μl of 2× Real Q Plus Master Mix (Ampliqon, Denmark), 900 nmol each of forward and reverse primers, 200 nmol of probe, and 4 μl of template DNA. The final volume was adjusted using nuclease-free water. Each qPCR run incorporated a no-template control and a positive control containing B. henselae DNA to ensure specificity and reliability. Amplification was carried out on the Corbett Rotor-Gene 6000 system (Corbett, Australia) with the following thermal cycling conditions: initial denaturation at 95 °C for 10 min, followed by 45 cycles of 95 °C for 15 s and 60 °C for 60 s. Data analysis was performed using Rotor-Gene® Q software (version 2.3.5; QIAGEN).

2.4. Determination of Bartonella species

All qPCR-positive samples were further examined for species identification by amplifying the 16S rRNA gene using specific primers [19]. PCR products were separated by electrophoresis on a 1.5% agarose gel. Selected amplicons were purified and submitted for Sanger sequencing (Genomin Co., Iran). = Sequences were analyzed using BLAST against the GenBank database, and species-level identification was assigned based on sequence similarity. Phylogenetic analysis was performed using MEGA version 10.

2.5. Statistical analysis

Statistical analyses were performed using IBM SPSS software, version 26.0 and Stata, Version 17Descriptive statistics, including mean with standard deviation for continuous variables, and frequencies with percentages for categorical (including dichotomous) variables, were reported. Univariate regression was used to assess the relationship between Bartonella infection and the studied variables. Variables with a univariate p-value <0.25 were considered for the multivariate model. These included: academic education, study groups, cigarette smoking, drug use, exposure to animals, history of receiving blood, and history of flea infestation. Collinearity diagnostics were performed using linear regression on the same set of independent variables. The condition indices were all below 5, and no variance proportions exceeded 0.5 for any pair of predictors (excluding the intercept), indicating that multicollinearity was not a significant issue in our data. The final multivariate model was built using Firth's penalized likelihood logistic regression with all selected variables entered simultaneously. A p-value less than 0.05 was considered statistically significant.

3. Results

3.1. Demographic and clinical data of participants

A total of 370 individuals were enrolled in this study, including 227 (61.4%) patients with HIV/AIDS (51 patients with AIDS and 176 HIV+), 26 (7.0%) with common variable immunodeficiency (CVID), 57 (15.4%) liver transplant recipients, 13 (3.5%) kidney transplant recipients, and 50 (13.5%) controls. Overall, 203 (54.9%) participants were male and 167 (45.1%) were female. The mean age of participants was 43.56 years ± 13.86 (range 16 to 86 years) (Table 2).

Table 2.

The mean and standard deviation of quantitative variables in among immunocompromised patients and control group.

variables Control n = 51 AIDS N = 51 HIV+
N = 176
Transplant
N = 66
CVID
N = 26
Age 47.1 (14.9) 44.6 (11.3) 45.0 (12.6) 45.2 (14.5) 31.5 (11.7)
BMI 26.1 (5.1) 22.5 (5.1) 25.7 (5.2) 25.3 (4.8) 25.5 (18.3)

Among the subgroups, CVID patients had the lowest mean age (31.5 years), while patients with AIDS exhibited the lowest mean BMI (22.5 kg/m2). Most participants in all groups resided in urban areas, and approximately 90% of all individuals were residents of Tehran or Alborz provinces. The highest frequencies of smoking, illicit drug use, and alcohol consumption were observed in HIV/AIDS patients (70.6%, 48.0%, and 24.0% respectively) (Table 3).

Table 3.

The Frequency and percent of frequency for qualitative variables in among immunocompromised patients and control group in Imam Khomeini hospital, Iran (2024-2025).

Variables Category N total in each category Control
N = 51
AIDS
N = 51
HIV+
N = 176
Transplant
N = 66
CVID
N = 26
Sex Male 203 19 (37.3%) 38 (74.5%) 99 (56.3%) 33 (50.0%) 14 (53.8%)
Female 167 32 (62.7%) 13 (25.5%) 77 (43.8%) 33 (50.0%) 12 (46.2%)
Residence Rural 2 0 (0.0%) 0 (0.0%) 1 (0.6%) 1 (1.5%) 0 (0.0%)
Urban 368 51 (100.0%) 51 (100.0%) 175 (99.4%) 65 (98.5%) 26 (100.0%)
Province Other 44 3 (5.9%) 6 (11.8%) 10 (5.7%) 25 (37.9%) 0 (0.0%)_
Tehran/Alborz 326 48 (94.1%) 45 (88.2%) 166 (94.3%) 41 (62.1%) 26 (100.0%)
Years of education diploma and lower 138 7 (26.9%) 24 (36.4%) 74 (42.0%) 28 (54.9%) 5 (9.8%)
Associate degree 139 5 (19.2%) 26 (39.4%) 72 (40.9%) 17 (33.3%) 19 (37.3%)
Bachelor's degree 64 11 (42.3%) 12 (18.2%) 22 (12.5%) 5 (9.8%) 14 (27.5%)
Master's degree 25 2 (7.7%) 4 (6.1%) 8 (4.5%) 1 (2.0%) 10 (19.6%)
Doctorate (PhD/MD) 4 1 (3.8%) 0 (0.0%) 0 (0.0%) 0 (0.0%) 3 (5.9%)
Smoking Yes 129 5 (9.8%) 36 (70.6%) 72 (41.6%) 11 (16.7%) 5 (19.2%)
No 238 46 (90.2%) 15 (29.4%) 101 (58.4%) 55 (83.3%) 21 (80.8%)
History of drug abuse Yes 56 2 (3.9%) 24 (48.0%) 29 (16.9%) 1 (1.5%) 0 (0.0%)
No 309 49 (96.1%) 26 (52.0%) 143 (83.1%) 65 (98.5%) 26 (100.0%)
Alcohol consumption Yes 46 5 (10.0%) 12 (24.0%) 24 (13.9%) 2 (3.0%) 3 (11.5%)
No 319 45 (90.0%) 38 (76.0%) 149 (86.1%) 64 (97.0%) 23 (88.5%)
Underlying diseasesa Yes 125 14 (27.5%) 16 (31.4%) 33 (18.8%) 53 (80.3%) 9 (34.6%)
No 245 37 (72.5%) 35 (68.6%) 143 (81.3%) 13 (19.7%) 17 (65.4%)
Exposure to dogs/cats due to living or working conditions Yes 94 5 (9.8%) 22 (43.1%) 49 (27.8%) 11 (16.7%) 7 (26.9%)
No 276 46 (90.2%) 29 (56.9%) 127 (72.2%) 55 (83.3%) 19 (73.1%)
Having pet animalb Yes 80 5 (9.8%) 20 (39.2%) 40 (22.7%) 9 (13.6%) 6 (23.1%)
No 290 46 (90.2%) 31 (60.8%) 136 (77.3%) 57 (86.4%) 20 (76.9%)
Exposure to domestic animals Yes 18 1 (2.0%) 5 (9.8%) 2 (1.2%) 7 (10.6%) 3 (11.5%)
No 348 50 (98.0%) 46 (90.2%) 170 (98.8%) 59 (89.4%) 23 (88.5%)
Cat scratches Yes 26 4 (7.8%) 6 (11.8%) 14 (8.0%) 0 (0.0%) 2 (7.7%)
No 340 47 (92.2%) 45 (88.2%) 158 (89.8%) 66 (100.0%) 24 (92.3%)
Ectoparasites bite Yes 15 1 (2.0%) 5 (10.0%) 5 (2.9%) 1 (1.5%) 3 (12.5%)
No 346 50.0%) 45 (90.0%) 165 (97.1%) 65 (98.5%) 21 (87.5%)
Flea infestation in last 5 years Yes 2 0.(0.0%) 1 (2.0%) 1 (0.6%) 0 (0.0%) 0 (0.0%)
No 359 50 (100.0%) 48 (98.0%) 170 (96.6%) 65 (100.0%) 26 (100.0%)
Rat or Mice Bite/exposure Yes 17 0 (0.0%) 6 (12.0%) 4 (2.4%) 2 (3.0%) 5 (20.0%)
No 344 50 (100.0%) 44 (88.0%) 166 (97.6%) 64 (97.0%) 20 (80.0%)
Financial income No income 137 9 (17.6%) 16 (32.7%) 63 (38.8%) 36 (55.4%) 13 (50.0%)
<15$ 6 0 (0.0%) 2 (4.0%) 4 (2.4%) 0 (0.0%) 0 (0.0%)
15-75$ 22 3 (5.9%) 3 (6.1%) 15 (9.3%) 0 (0.0%) 1 (3.8%)
75-150$ 73 7 (13.7%) 19 (38.7%) 30 (18.5%) 10 (15.4%) 7 (26.9%)
>150$ 115 32 (62.7%) 9 (18.4%) 50 (30.9%) 19 (29.2%) 5 (19.2%)
Homelessness Yes 5 1 (2.0%) 0 (0.0%) 4 (2.4%) 0 (0.0%) 0 (0.0%)
No 355 50 (98.0%) 50 (100.0%) 164 (97.6%) 65 (100.0%) 26 (100.0%)
Receiving blood Yes 70 0 (0.0% 14 (27.5%) 26 (14.8%) 28 (42.4%) 2 (7.7%)
No 300 51(100.0) 37 (72.5%) 150 (85.2%) 38 (57.6%) 24 (92.3%)
receiving plasma-derived products Yes 106 0 (0.0%) 14 (27.5%) 28 (15.9%) 38 (57.6%) 26 (100.0%)
No 264 51 (100.0%) 37 (72.5%) 148 (84.1%) 28 (42.4%) 0 (0.0%)
a

“Underlying diseases” refers to any chronic non-communicable disease reported by the participant or documented in the medical record. Based on our questionnaire, the following specific conditions were recorded: diabetes type 1 or 2, asthma and allergies, chronic respiratory problems, Thyroid disorders, cardiovascular problems, hypertension, history of myocardial infarction or stroke, and dyslipidemia.

b

Any pet animal, like cat, dog, birds, etc.

Animal exposure was common: over 40% of patients with AIDS and approximately 30% of HIV-infected individuals reported contact with domestic animals. Pet ownership was also more frequent among patients with AIDS (39.2%). Cat scratches (11.8%) and flea infestation (2.0%) were commonly reported among AIDS patients, while CVID patients had the highest rate of ectoparasite bites (12.5%). Homelessness was reported by four patients in the HIV-positive group (2.4%) and one participant in the control group (2.0%) (Table 3). All CVID patients (100%) reported a history of receiving plasma-derived products, specifically intravenous immunoglobulin (IVIG). Eighty-five percent of all persons had received ART, and the proportion did not differ between positive (85.5%) and negative (85.7%) patients. The mean (SD) viral load in 34 persons was not recorded, but in negative persons (5616.2 ± 51349.1 copies/mL, n = 187) it was higher than in positive persons (119.0 ± 188.6 copies/mL, n = 6); however, the difference was not statistically significant (P = 0.63).

3.2. Bartonella infections

DNA of Bartonella was detected in 7 of 370 participants (1.9%). All positive cases were observed in the HIV/AIDS cohort corresponding to an overall prevalence of 3.1%.No positive cases were identified among the control group. Of these, 5 cases (2.8%) occurred among HIV-positive individuals without AIDS, and 2 cases (3.9%) were detected among patients with AIDS. Education level seemed to be associated with infection: all qPCR-positive individuals had no formal academic education (p = 0.001). Cigarette smokers had a higher odds of Bartonella infection (OR 4.76; 95% CI, 0.91–24.88), although this association was not statistically significant. A history of drug using was associated with positivity (OR 7.85; 95% CI, 1.36–71.07). Contact with cats or dogs increased the odds of infection (OR 1.46; 95% CI 0.28–7.68), but this association was not significant. A history of ectoparasite infestation within the past five years were associated with Bartonella infection (p = 0.04; OR 58.83; 95% CI, 3.20–1055.30). Flea bites were also more frequent among Bartonella positive participants (6.7% vs 1.7%); but the association was not statistically significant (p = 0.20; OR 4.05; 95% CI, 0.46–35.93). No other demographic or clinical variables showed a statistically significant association with Bartonella infection (Table 4).

Table 4.

Univariate logistic regression and penalized multivariate regression analysis of factors associated with Bartonella DNA positivity using qPCR among immunocompromised patients and control group Imam Khomeini hospital, Iran (2024-2025).

Variable Category Bartonella negative (N = 363)
Bartonella positive (N = 7)
Univariate
Multivariate analysis$
n (%) n(%) OR (95%CI) P value OR (95%CI) P value
Group of study HIV+ 171 (97.2%) 5 (2.8%) Reference 0.13 Reference
AIDS 49 (96.1%) 2 (3.9%) 1.40 (0.26-7.42) 0.40 (0.06-2.85) 0.36
CVID 26 (100.0%) 0 (0.0%) NA 1.55 (0.07-36.14) 0.78
Transplant 66 (100.0%) 0 (0.0%) NA 0.21 (0.01-4.44) 0.31
Control 51 (100.0%) 0 (0.0%) NA 1.19(0.05-28.02) 0.91
Age <40 143 (98.6%) 2 (1.4%) Reference 0.71 Not entered in model
≥40 220 (97.8%) 5 (2.5%) 1.63 (0.31-8.49)
BMI (kg/m2) <18.5 33 (97.1%) 1 (2.9%) Reference 0.41 Not entered in model
18.5-24.99 163 (98.8%) 2 (1.2%) 0.41 (0.04-4.59)
25-29.99 114 (98.3%) 2 (1.7%) 0.58 (0.05-6.59)
>30 53 (96.4%) 2 (3.6%) 1.24 (0.11-14.28)
Gender Male 198 (97.5%) 5 (2.5%) Reference 0.46 Not entered in model
Female 165 (98.8%) 2 (1.2%) 0.48 (0.09-2.51)
Place Rural 2 (100.0%) 0 (0.0%) NA 0.99 Not entered in model
Urban 361 (98.1%) 7 (1.9%)
Province Other 43 (97.7%) 1 (2.3%) Reference 0.99 Not entered in model
Tehran/Alborz 320 (98.2%) 6 (1.8%) 0.81 (0.09-6.86)
level of Education Diploma and lower 131 (94.9%) 7 (5.1%) NA 0.001 Reference 0.06
Academic degree 232 (100.0%) 0 (0.0%) 0.07(0.01-1.13)
Smoking No 236 (99.2%) 2 (0.8%) Reference 0.06 Reference 0.83
Yes 124 (96.1%) 5 (3.9%) 4.76 (0.91-24.88) 1.02 (0.11-9.34)
Drug use No 306 (99.0%) 3 (1.0%) Reference 0.01 Reference 0.52
Yes 52 (92.9%) 4 (7.1%) 7.85 (1.71-36.07) 2.31 (0.29-18.18)
Alcohol consumption No 314 (98.4%) 5 (1.6%) Reference 0.22 Reference 0.70
Yes 44 (95.7%) 2 (4.3%) 2.86 (0.54-15.16) 0.50 (0.05-4.64)
Underlying diseasesa No 240 (98.0%) 5 (2.0%) Reference 0.99 Not entered in model
Yes 123 (98.4%) 2 (1.6%) 0.78 (0.15-4.08)
Exposure to dog/cat No 273 (98.9%) 3 (1.1%) Reference 0.07 Reference 0.26
Yes 90 (95.7%) 4 (4.3%) 4.04 (0.89-18.41) 3.22 (0.55-18.70)
Having pet animalb No 285 (98.3%) 5 (1.7%) Reference 0.65 Not entered in model
Yes 78 (97.5%) 2 (2.5%) 1.46 (0.28-7.68)
Exposure with farm animal No 341 (98.0%) 7 (2.0%) NA 0.99 Not entered in model
Yes 18 (100.0%) 0 (0.0%)
Cat scratches No 340 (98.3%) 6 (1.7%) Reference 0.26 Not entered in model
Yes 14 (93.3%) 1 (6.7%) 4.05 (0.46-35.93)
History of flea infestation in last 5 year No 353 (98.3%) 6 (1.7%) Reference 0.04 Reference 0.15
Yes 1 (50.0%) 1 (50.0%) 58.83 (3.2-1055.30) 38.78 (0.26-5721.81)
History of Flea bite in last years No 340 (98.3%) 6 (1.7%) Reference 0.2 Reference 0.75
Yes 14 (93.3%) 1 (6.7%) 4.05 (0.46-35.93) 0.57 (0.02-17.45)
Rat or Mice No 337 (98.0%) 7 (2.0%) NA 0.99 Not entered in model
Yes 17 (100.0%) 0 (0.0%)
Homelessness No 348 (98.0%) 7 (2.0%) NA 0.99 Not entered in model
Yes 5 (100.0%) 0 (0.0%)
Receiving blood Yes 67 (95.7% 3 (4.3%) 3.31 (0.73-15.15) 0.13
No 296 (98.7%) 4 (1.3%) 2.91 (0.53-16.04) 0.22
receiving plasma-derived products Yes 104 (98.1%) 2 (1.9%) 0.99 (0.19-5.22) 0.99
No 259 (98.1%) 5 (1.9%)

Frequency (n) and percent of frequency in each category (%), Odds ratio and 95% confidence interval and P value are reported for each analysis.

$ Variables with p > 0.25 in univariate analysis were included.

a

“Underlying diseases” refers to any chronic non-communicable disease reported by the participant or documented in the medical record. Based on our questionnaire, the following specific conditions were recorded: diabetes type 1 or 2, asthma and allergies, chronic respiratory problems, Thyroid disorders, cardiovascular problems, hypertension, history of myocardial infarction or stroke, and dyslipidemia.

b

Any pet animal, like cat, dog, birds, etc.

Multivariable Firth logistic regression revealed no statistically significant predictors of Bartonella infection (overall model p = 0.46). Although academic education showed a borderline protective effect (OR = 0.06, 95% CI: 0.01–1.12, p = 0.06), and flea infestation had a large but imprecise odds ratio (OR = 38.78, 95% CI: 0.26–5721.81.24, p = 0.15), none reached the 0.05 significance level (Table 4).

3.3. Determining of Bartonella species

Sequencing analysis of the 16S rRNA gene confirmed that all qPCR-positive samples belonged to B. quintana. BLAST analysis demonstrated a high degree of genetic similarity between all isolates and reference strains of B. quintana. Notably, two samples (EL-26 and E−2121) showed 100% sequence identity with the B. quintana reference strain AP019773.1. Phylogenetic analysis further supported the clustering of all isolates within the B. quintana clade (Fig. 1; Table 1).

Fig. 1.

Fig. 1

Bioinformatics analysis of sequences obtained in this study and data related to Bartonella species in the GenBank. The analysis was performed using MEGA software and the Neighbor-Joining method. Bartonella spp. identified in this study are indicated by black triangles.

Table 1.

Oligonucleotide sequences of primer and probe used in this study.

Organism Gene target Primer Sequence (5′- 3′)
Bartonella spp. 16S-23S rRNA Forward 5′-GGGGAAGGTTTTCCGGTTTATC-3′
Reverse 5′-GAGGACTTGAACCTCCGACC-3′
Probe 5′-6FAM'-GGAGGGCTTGTAGCTCAGYTGGTTAGAGCG_TAMRA-3′

4. Discussion

To the best of our knowledge, this study is the first to investigate the prevalence of Bartonella infection among immunocompromised individuals in Iran. Among 370 participants, Bartonella DNA was detected in 1.9%, that all of whom were HIV infected, highlighted a prevalence of 3.1% in this subgroup. Although the number of positive cases was small and did not allow for statistical comparison, the slightly higher prevalence observed among patients with AIDS (3.9%) may reflect the greater degree of immune dysfunction associated with advanced HIV infection. Immunodeficiency due to AIDS could increase susceptibility to opportunistic pathogens such as Bartonella spp. This restriction to the HIV-infected population underscores a clinical concern, as immunocompromised individuals, particularly those with impaired cellular immunity, are at increased risk of opportunistic infections such as bartonellosis [20]. The study conducted in San Francisco evaluated 382 febrile patients and identified Bartonella infection in 18% of cases using culture, indirect fluorescent antibody (IFA) testing, or PCR. B. henselae or B. quintana was isolated or detected by PCR in 12 patients (3%), all of whom were HIV-positive.These results emphasize that Bartonella infection is a relevant and underrecognized cause of febrile illness among people living with HIV(20). This similarity reinforces the role of Bartonella as an opportunistic pathogen in HIV-positive populations. Bartonella spp. are globally distributed zoonotic pathogens [21] and their clinical severity is often modulated by the host's immune status. As noted in prior literature, Bartonella infections tend to present more severely in immunocompromised individuals, particularly in those with HIV/AIDS or undergoing immunosuppressive therapy [22,23]. The importance of host immunity is further underscored by the fact that Bartonella infection can remain subclinical in immunocompetent individuals but can lead to disseminated disease in those with impaired immune responses.

Although a history of flea infestation within the past five years seemed as statistically significant association with Bartonella DNA positivity, the extremely wide confidence interval indicates substantial uncertainty regarding the true magnitude of this effect. This imprecision is due to the very small number of participants with flea infestation (n = 2), and the estimated odds ratio should therefore be interpreted with caution. While the association is likely genuine, the precise strength of the risk cannot be reliably determined from the current data. Bartonella is primarily transmitted by arthropod vectors, such as fleas, and through contact with domestic animals. Our results may emphasizes the critical role of ectoparasites in the epidemiology of Bartonella transmission [24]. Additionally, a history of drug using seemed associated with infection (p = 0.01), likely reflecting behavioral and socioeconomic vulnerabilities that increase exposure risk. Although the route of drug use is not ascertained, and recognizing prior evidence that subclinical Bartonella bacteremia has been detected among blood donors—raising concerns about transfusion transmission, the hypothesis of Bartonella transmission via injection practices or contaminated blood merits further investigation. Therefore, additional studies are warranted to provide stronger evidence [25]. None of the variables reached statistical significance at the α = 0.05 level in multivariate penalized regression. This is likely due to the small number of positive cases (n = 7), which results in wide confidence intervals and low power to detect associations.

A study from Korea assessed B. henselae seroprevalence in healthy adults and reported an overall positivity rate of 15%. The prevalence was significantly higher among individuals who had raised cats (22.2%) compared to those without cat exposure (13.7%). In our study, no statistically significant association was found between exposure to dogs or cats and Bartonella infection. This contrasts with the Korean study in healthy adults, potentially due to differences in host immune status, intensity of exposure, or diagnostic methods [26]. A comprehensive understanding of the intricate interactions between Bartonella spp. its vectors, and its reservoirs, as well as the global distribution of Bartonella spp. infections, is essential for evaluating the public health impact of bartonellosis [27].

The prevalence of B. quintana in United States was reported 15% among individuals with a history of homelessness, confirming that B. quintana remains a public health concern in the United States and is likely underrecognized based on currently available data [28]. Another study from the United States reported cases of B. quintana infection in organ transplant recipients who had received organs from donors with a history of homelessness. This suggests that homelessness may be associated with an increased risk of Bartonella transmission through organ transplantation a finding not observed in our study. The study highlights the potential for transmission via transplanted organs, particularly when donors belong to high-risk populations, such as individuals experiencing homelessness, who are more likely to be exposed to ectoparasites like lice and fleas known vectors of B. quintana [9]. While homelessness was uncommon in our study (reported by only four HIV-positive participants and one control), it is important to note that homelessness, drug user, and low socioeconomic status often coexist and may act as indirect factors associated with infection.

Given these risks, B. quintana could be considered for classification as a notifiable disease, with initial surveillance efforts focusing on high-risk populations [29]. Given a reported case-fatality approaching 10% [30] B. quintana infection requires early diagnosis, ideally before the onset of endocarditis and a high index of suspicion in both at risk individuals and patients without known risk factors, particularly in regions where cases have been reported [6].

Taken together, these findings underscore the need for targeted surveillance of Bartonella spp. in high-risk immunocompromised populations, integration of molecular and serological diagnostic tools, and enhanced clinical awareness, particularly in regions where the infection remains largely under recognized.

4.1. Study limitations

In our study wide confidence intervals reflect small numbers; estimates should be interpreted conservatively. One of the limitations of this study is that due to the limited number of immunocompromised patients, sampling was restricted to a single hospital in central Tehran. In some cases, sampling was not possible due to the use of specific medications or isolation requirements. Additionally, the study focused exclusively on the detection of Bartonella spp. in immunocompromised individuals and did not examine potential transmission routes, such as animal contact, tick bites, or exposure to fleas, in detail. Another limitation of this study is the potential for delayed diagnosis, which may lead to the administration of immunosuppressive agents to manage clinical symptoms. This could lead to false-negative PCR results and an underestimation of the true prevalence of Bartonella infection in this population.

5. Conclusion

According to the results of our study, B. quintana infection was detected among immunocompromised patients at Imam Khomeini Hospital in Tehran, with all positive cases occurring in HIV-infected individuals. Although the overall prevalence was low, the findings underscore the clinical significance of Bartonella infection in high-risk populations, particularly those with impaired immune function. The detection of B. quintana in this setting highlights the need for increased clinical awareness and the inclusion of Bartonella in the differential diagnosis of immunocompromised patients.

CRediT authorship contribution statement

Zahra Tahmasebi Ashtiani: Data curation, Investigation, Supervision, Writing – original draft, Writing – review & editing. Malihe Hasannezhad: Data curation, Resources, Software, Supervision, Validation. Mina Latifian: Data curation, Investigation, Writing – review & editing. Ladan Abbasian: Conceptualization, Data curation, Supervision, Visualization. Arash Kalantari: Data curation, Investigation, Methodology, Software. Fereshteh Ghaisvand: Data curation, Funding acquisition, Investigation, Resources. Mohsen Meidani: Resources, Software, Supervision, Validation. Zahra Ahmadinejad: Investigation, Software, Validation, Visualization. Mohammad Reza Khatami: Software, Supervision, Validation, Visualization, Writing – review & editing. Fahimeh Bagheri Amiri: Formal analysis, Funding acquisition, Methodology, Project administration, Resources, Software, Supervision, Validation, Visualization, Writing – review & editing. Saber Esmaeili: Conceptualization, Resources, Software, Supervision, Validation, Writing – review & editing.

Declaration of competing interest

The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

Acknowledgments

The authors of this study would like to express their sincere gratitude to the staff of Imam Khomeini Hospital Complex and the Pasteur Institute of Iran for their valuable support. Author contributions are Z.T.A and M.H drafted the manuscript. Z.T.A, M.L collected the clinical data. F.B.A conducted a statistical analysis. L.A, A.K, F.GH, M.M, Z.A, M.R.KH and S.E revised the manuscript. This study was supported by the Pasteur Institute of Iran under the code 2209. The authors report no conflicts of interest relevant to the published work.

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