In the title salt, the crystal structure features N—H⋯O and O—H⋯O hydrogen-bonding interactions, which link the components into infinite chains and generate an extended supramolecular network.
Keywords: crystal structure, 2-amino-4-methylpyridin-1-ium cation, hippurate anion, Hirshfeld surface analysis
Abstract
In the extended structure of the title salt, C6H9N2+·C9H8NO3−·2H2O, the 2-amino-4-methylpyridin-1-ium cation and hippurate [or 2-(phenylformamido)acetate] anion are linked through paired N—H⋯O hydrogen bonds, forming an R22(8) motif. The water molecules of crystallization participate in O—H⋯O and N—H⋯O hydrogen-bonding interactions, which connect the molecular components into one-dimensional chains that extend along the [010] direction. These interactions collectively generate a three-dimensional supramolecular network.
1. Chemical context
Pyridinium-based organic salts continue to attract interest owing to their diverse supramolecular architectures and their ability to form robust hydrogen-bonded networks in the solid state (Konovalova & Reiss, 2025 ▸; Bis & Zaworotko, 2005 ▸; Budzikur et al., 2022 ▸). 2-Amino-4-methylpyridine, C6H8N2, is a bi-functional heterocycle containing both a basic pyridine nitrogen (ring N atom) and an exocyclic amino group (-NH2), enabling different hydrogen-bonding patterns and facilitating salt formation with a variety of organic acids. Protonated aminopyridines are widely used as structure-directing cations because their multiple donor and acceptor sites support extended N—H⋯O, O—H⋯O, and π-associated supramolecular motifs in the solid-state (Bedeković et al., 2017 ▸; Desiraju, 2002 ▸; Aakeröy & Seddon, 1993 ▸).
Hippuric acid (benzoylglycine, C9H9NO3) is a biologically relevant carboxylic acid that mimics short peptide fragments and provides several potential donor/acceptor sites through its carboxyl, amide, and aromatic groups (Li et al., 2024 ▸). Both hippuric acid and its deprotonated hippurate (benzoylglycinate, C9H8NO3−) anions are widely employed in organic salts and co-crystals, where their amide, carboxylate, and aromatic functionalities enable complementary hydrogen-bonding interactions and π-stacking contacts (Laishram et al., 2025 ▸; Suganya et al., 2021 ▸).
Proton transfer in crystalline acid–base systems is commonly rationalized using the ΔpKa rule (Cruz-Cabeza, 2012 ▸, 2022 ▸): when the difference between the pKa of the conjugate acid of the base and the pKa of the acid exceeds ≃ 2–3, salt formation is favored. For the present system, the reported pKa values (hippuric acid ≃ 3.6 and 2-amino-4-methylpyridinium ion ≃ 7.5–8.1) gives ΔpKa ≃ 3.9, supporting proton transfer and the formation of a 2-amino-4-methylpyridinium benzoylglycinate salt. Such a proton transfer leads to the formation of charge-assisted N+—H⋯O hydrogen bonds, which are typically shorter, and more electrostatically strengthened than their neutral counterparts; these interactions often dominate the molecular packing, enhance crystal cohesion and facilitate the incorporation of water molecules of crystallization that further connect the ions through O—H⋯O and O—H⋯N hydrogen bonding.
As part of our studies in this area, we now describe the synthesis, structure and Hirshfeld surface analysis of the title hydrated salt, C6H9N2+·C9H8NO3−·2H2O (I).
2. Structural commentary
The hydrated title salt (I) was obtained by proton transfer from hippuric acid to 2-amino-4-methylpyridine in aqueous solution. The crystal structure unambiguously confirms salt formation through a proton-transfer reaction, which is consistent with the acidity constants of the components noted above, which strongly favors salt formation rather than co-crystallization
Compound (I) crystallizes as orthorhombic in space group Pbca. The asymmetric unit consists of one 2-amino-4-methylpyridin-1-ium cation, one hippurate anion and two water molecules of crystallization, as illustrated in Fig. 1 ▸. In the cation, proton migration to the pyridine nitrogen atom (N2) is further supported by the increase in the internal angle around the protonated nitrogen atom [C10—N2—C14 = 122.22 (13)°], compared with 117.3 (1)° in neutral 2-amino-4-methylpyridine (Kvick & Noordik, 1977 ▸). The bond lengths and angles of the cation closely resemble those observed in related structures, including 2-amino-4-methylpyridin-1-ium hydrogen squarate (Vetrivel et al., 2025 ▸) and other similar protonated analogues (Khalib et al., 2014 ▸). The non-hydrogen atoms of the cation are essentially planar, with a maximum deviation of 0.027 (3) Å for atom C15. In the hippurate anion, the carboxylate group has nearly equivalent C—O bond lengths [O2—C9 = 1.2377 (18) Å and O3—C9 = 1.2598 (19) Å; Δ = 0.0221 Å], confirming deprotonation (Table 1 ▸). The key torsion angles for the side chain are C1—C7—N1—C8 = −175.96 (12)° and C7—N1—C8—C9 = −87.11 (18)° and the dihedral angle between the C1–C6 phenyl ring and the carboxylate plane (O1/O2/C8/C9) is 70.96 (7)°. These geometric parameters are comparable to those reported for deprotonated hippurate anions in related crystal structures, such as cytosinium N-benzoylglycinate monohydrate (Görbitz & Sagstuen, 2004 ▸).
Figure 1.
The molecular structure of the title salt, (I), showing the atom-labelling scheme. Displacement ellipsoids are drawn at the 50% probability level.
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| O5—H5A⋯O4 | 0.83 (2) | 2.00 (2) | 2.8225 (18) | 167 (3) |
| N1—H1⋯O4i | 0.85 (1) | 2.25 (2) | 2.9992 (18) | 148 (2) |
| N2—H2A⋯O3ii | 0.90 (2) | 1.78 (2) | 2.6850 (17) | 176 (2) |
| N3—H3A⋯O2ii | 0.89 (2) | 1.99 (2) | 2.8751 (17) | 175 (2) |
| N3—H3B⋯O5iii | 0.90 (2) | 1.94 (2) | 2.8368 (18) | 171 (2) |
| O4—H4A⋯O3iv | 0.88 (2) | 1.88 (2) | 2.7392 (17) | 166 (2) |
| O4—H4B⋯O1v | 0.87 (2) | 1.95 (2) | 2.8173 (18) | 173 (2) |
| O5—H5B⋯O2i | 0.88 (2) | 1.94 (2) | 2.8061 (18) | 170 (3) |
Symmetry codes: (i)
; (ii)
; (iii)
; (iv)
; (v)
.
3. Supramolecular features
In the extended structure, the cation and anion are connected through N2—H2A⋯O3 and N3—H3A⋯O2 hydrogen bonds (Table 1 ▸, Fig. 2 ▸), generating an
(8) motif. The two water molecules of crystallization participate actively in the hydrogen-bonding network. In particular, a O5—H5A⋯O4 hydrogen bond links the two water molecules. All the oxygen atoms of the anion (O1–O3), together with the water O atoms (O4 and O5), function as hydrogen-bond acceptors in various intermolecular N—H⋯O and O—H⋯O interactions (Table 1 ▸).
Figure 2.
(a) Part of the crystal structure of (I) showing the
(8) motif formed by intermolecular N—H⋯O hydrogen bonds. (b) The N1—H1⋯O4 and O4—H4B⋯O1 hydrogen bonds connect neighbouring hippurate anions and water molecule O4 (water – 1), forming a one-dimensional chains runs along the [010] direction. (c) The O4—H4A⋯O3, N1—H1⋯O4 and O4—H4B⋯O1 hydrogen bonds generate an
(16) motif, resulting in a supramolecular ladder-like arrangement running parallel to [010].
The N1—H1⋯O4 and O4—H4B⋯O1 hydrogen bonds connect neighbouring hippurate anions and water molecule (water-1, O4), forming four-membered units that propagate into a one dimensional chains extending along the [010] direction. Furthermore, the O4—H4A⋯O3 hydrogen bond along with the N1—H1⋯O4 and O4—H4B⋯O1 hydrogen bonds, generates an
(16) loop, resulting in a supramolecular ladder-like arrangement running parallel to [010]. This ladder is further reinforced by hydrogen bonding involving the cation, namely N2—H2A⋯O3, N3—H3A⋯O2 and O5—H5B⋯O2 and N3—H3B···O5, which link the second water molecule (water-2, O5) to the cationic fragment. Collectively, the hydrogen bonds interconnect the cations, anions, and water molecules of crystallization into a three-dimensional supramolecular network (Figs. 3 ▸ and 4 ▸).
Figure 3.
Overall crystal packing of the title salt (I), viewed down the a axis. Hydrogen atoms have been omitted for clarity.
Figure 4.
Two views of the Hirshfeld surfaces of the cation, anion and water molecules of crystallization in the title salt (I), mapped over dnorm and the shape-index surface.
4. Hirshfeld surface analysis
Hirshfeld surface (HS) analysis was carried out using CrystalExplorer 21.5 (Turner et al., 2017 ▸). The front and back views of the HS mapped over dnorm for the asymmetric unit are shown in Fig. 4 ▸, together with the individual surfaces for the cation, anion and the two water molecules. Bright-red spots on the dnorm-mapped surfaces correspond to close contacts, i.e., intermolecular distances shorter than the sum of the van der Waals radii, and thus indicate significant non-covalent interactions. In contrast, the shape-index surface does not exhibit complementary red and blue triangular features, indicating the absence of significant π–π stacking interactions in (I).
The full and decomposed two-dimensional fingerprint plots for the cation, anion and the water molecules are presented in Fig. 5 ▸. The H⋯H contacts make the largest contribution for both the cation (50.1%) and the anion (47.1%), and also account for significant contributions in water-1 (40.6%) and water-2 (46.5%). For the water molecules, O⋯H/H⋯O contacts are particularly prominent, reflecting their active participation in O—H⋯O hydrogen bonds. The sharp spikes observed in the FP plots at de + di = 1.6–1.8 Å for O⋯H/H⋯O contacts are characteristic of strong N/O—H⋯O hydrogen bonds (Table 1 ▸). The C⋯H/H⋯C interactions represent the next significant contribution in the cation (18.5%) and anion (12.8%). The remaining contacts, namely N⋯H/H⋯N, C⋯N and C⋯C, contribute comparatively less to the total Hirshfeld surface area. Although both water molecules participate in O—H⋯O hydrogen bonding, their relative percentage contributions and hydrogen-bond geometries indicate subtle differences in their interaction environments within the crystal.
Figure 5.
Full and decomposed two-dimensional fingerprint (FP) plots for the cation, anion and the two water molecules of crystallization in the title salt (I), showing the different intermolecular contacts and their percentage contributions.
5. Database survey
A search of the Cambridge Structural Database (CSD, Version 6.01, updated of November 2025; (Groom et al., 2016 ▸) performed using Conquest (Bruno et al., 2002 ▸) for the 2-amino-4-methylpyridin-1-ium cation yielded 62 entries corresponding to salt forms. A number of these salts are with substituted benzoic acids such as 2-hydroxybenzoic acid (CSD refcode DUTZOI) and 3-hydroxybenzoic acid (AGAQIK) (Khalib et al., 2013 ▸), 2- and 4-chlorobenzoic acids (COZVAQ and COZVOE); 4-methylbenzoic acid (COZVIY) (Khalib et al., 2014 ▸); and 4-nitrobenzoic acid (DUNCOF; Hemamalini & Fun, 2010a ▸), as well as other related substituted benzoates.
Salts with aliphatic carboxylic acids have also been reported, including succinic acid (DICYEW; Seth et al., 2018 ▸), fumaric acid (DUSPUD; Hemamalini & Fun, 2010c ▸), trifluoroacetic acid (KUSVAW; Hemamalini & Fun, 2010b ▸), sorbic acid (SUZXUH; Hemamalini & Fun, 2010d ▸), oxalic acid (YIZDAQ; Hemalatha et al., 2023 ▸) and tartaric acid (YOHHIO; Jovita et al., 2014 ▸).
A separate search for the hippurate anion revealed eight structures in the CSD. These correspond to salts of hippuric acid with various active pharmaceutical ingredients (APIs) and biologically relevant bases, including imatinib (AJIPOC) (Jiang et al., 2025 ▸); ciprofloxacin (OSUQEA; Chadha et al., 2016 ▸); cytosine (CYTBGL01); Görbitz & Sagstuen, 2004 ▸) guanidine (BEMWOJ; Reena et al., 2022 ▸) and acridine (XANSOY; Suganya et al., 2021 ▸). These results indicate that, although salts of the individual components are well documented in the structural database, structures comprising both components in a single salt are comparatively uncommon. The available entries further underscore the conformational flexibility and supramolecular versatility of the hippurate anion, which consistently assembles into stable crystal architectures primarily via classical N—H⋯O and O—H⋯O hydrogen-bonding interactions.
6. Synthesis and crystallization
Hot methanol solutions (50 mL) of 2-amino-4-methylpyridine (1.08 g, 1.00 mmol) and hippuric acid (1.80 g, 1.00 mmol) were mixed and warmed over a heating magnetic stirrer hotplate for 6h. The reaction mixture was stirred at room temperature for 6 h to obtain a clear homogeneous solution. The resulting solution was filtered and allowed to evaporate slowly at room temperature. Colourless block-shaped crystals suitable for single-crystal X-ray diffraction were obtained after approximately 10 days.
7. Refinement
Crystal data, data collection and structure refinement details are summarized in Table 2 ▸. H atoms were positioned geometrically (C—H = 0.93–0.96 Å) and refined as riding with Uiso(H) = 1.2Ueq(C).
Table 2. Experimental details.
| Crystal data | |
| Chemical formula | C6H9N2+·C9H8NO3−·2(H2O) |
| M r | 323.35 |
| Crystal system, space group | Orthorhombic, Pbca |
| Temperature (K) | 298 |
| a, b, c (Å) | 15.137 (3), 7.3028 (14), 30.583 (6) |
| V (Å3) | 3380.7 (11) |
| Z | 8 |
| Radiation type | Cu Kα |
| μ (mm−1) | 0.81 |
| Crystal size (mm) | 0.35 × 0.24 × 0.22 |
| Data collection | |
| Diffractometer | Bruker D8 Venture Diffractometer |
| Absorption correction | Multi-scan (SADABS; Krause et al., 2015 ▸) |
| Tmin, Tmax | 0.547, 0.753 |
| No. of measured, independent and observed [I > 2σ(I)] reflections | 24560, 3208, 2918 |
| R int | 0.051 |
| (sin θ/λ)max (Å−1) | 0.610 |
| Refinement | |
| R[F2 > 2σ(F2)], wR(F2), S | 0.053, 0.153, 1.09 |
| No. of reflections | 3208 |
| No. of parameters | 234 |
| No. of restraints | 8 |
| H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
| Δρmax, Δρmin (e Å−3) | 0.20, −0.20 |
Supplementary Material
Crystal structure: contains datablock(s) I. DOI: 10.1107/S2056989026004846/hb8212sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989026004846/hb8212Isup2.hkl
Supporting information file. DOI: 10.1107/S2056989026004846/hb8212Isup3.cml
CCDC reference: 2552915
Additional supporting information: crystallographic information; 3D view; checkCIF report
Acknowledgments
The authors gratefully acknowledge SAIF, IIT Madras, for the SCXRD data collection.
supplementary crystallographic information
2-Amino-4-methylpyridin-1-ium 2-(phenylformamido)acetate dihydrate. Crystal data
| C6H9N2+·C9H8NO3−·2(H2O) | Dx = 1.271 Mg m−3 |
| Mr = 323.35 | Cu Kα radiation, λ = 1.54178 Å |
| Orthorhombic, Pbca | Cell parameters from 7667 reflections |
| a = 15.137 (3) Å | θ = 4.1–70.0° |
| b = 7.3028 (14) Å | µ = 0.81 mm−1 |
| c = 30.583 (6) Å | T = 298 K |
| V = 3380.7 (11) Å3 | Block, colourless |
| Z = 8 | 0.35 × 0.24 × 0.22 mm |
| F(000) = 1376 |
2-Amino-4-methylpyridin-1-ium 2-(phenylformamido)acetate dihydrate. Data collection
| Bruker D8 Venture Diffractometer | 2918 reflections with I > 2σ(I) |
| Radiation source: micro focus sealed tube | Rint = 0.051 |
| φ and ω scans | θmax = 70.0°, θmin = 2.9° |
| Absorption correction: multi-scan (SADABS; Krause et al., 2015) | h = −18→18 |
| Tmin = 0.547, Tmax = 0.753 | k = −8→8 |
| 24560 measured reflections | l = −34→37 |
| 3208 independent reflections |
2-Amino-4-methylpyridin-1-ium 2-(phenylformamido)acetate dihydrate. Refinement
| Refinement on F2 | Hydrogen site location: mixed |
| Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
| R[F2 > 2σ(F2)] = 0.053 | w = 1/[σ2(Fo2) + (0.0923P)2 + 0.350P] where P = (Fo2 + 2Fc2)/3 |
| wR(F2) = 0.153 | (Δ/σ)max = 0.001 |
| S = 1.09 | Δρmax = 0.20 e Å−3 |
| 3208 reflections | Δρmin = −0.19 e Å−3 |
| 234 parameters | Extinction correction: SHELXL2019/2 (Sheldrick 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| 8 restraints | Extinction coefficient: 0.0072 (6) |
2-Amino-4-methylpyridin-1-ium 2-(phenylformamido)acetate dihydrate. Special details
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
2-Amino-4-methylpyridin-1-ium 2-(phenylformamido)acetate dihydrate. Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| C1 | 0.52405 (11) | 0.6531 (2) | 0.55085 (5) | 0.0634 (4) | |
| C2 | 0.57345 (12) | 0.5010 (3) | 0.56117 (6) | 0.0820 (5) | |
| H2 | 0.553559 | 0.420177 | 0.582510 | 0.098* | |
| C3 | 0.65265 (14) | 0.4676 (3) | 0.53993 (7) | 0.0976 (6) | |
| H3 | 0.685875 | 0.364962 | 0.547277 | 0.117* | |
| C4 | 0.68232 (13) | 0.5843 (4) | 0.50824 (6) | 0.0949 (6) | |
| H4 | 0.735675 | 0.561428 | 0.494186 | 0.114* | |
| C5 | 0.63421 (17) | 0.7325 (4) | 0.49740 (7) | 0.0992 (7) | |
| H5 | 0.654065 | 0.811233 | 0.475605 | 0.119* | |
| C6 | 0.55571 (15) | 0.7679 (3) | 0.51848 (7) | 0.0886 (5) | |
| H6 | 0.523277 | 0.871148 | 0.510788 | 0.106* | |
| C7 | 0.43806 (12) | 0.6994 (2) | 0.57182 (5) | 0.0653 (4) | |
| C8 | 0.30803 (10) | 0.5937 (2) | 0.61047 (5) | 0.0666 (4) | |
| H8A | 0.275980 | 0.478744 | 0.609411 | 0.080* | |
| H8B | 0.276331 | 0.680558 | 0.592319 | 0.080* | |
| C9 | 0.30683 (10) | 0.6635 (2) | 0.65749 (5) | 0.0614 (4) | |
| C10 | 0.22844 (9) | 0.12490 (18) | 0.27751 (4) | 0.0547 (3) | |
| C11 | 0.24565 (10) | 0.05872 (18) | 0.32012 (4) | 0.0588 (4) | |
| H11 | 0.198861 | 0.022428 | 0.337826 | 0.071* | |
| C12 | 0.32969 (10) | 0.0475 (2) | 0.33553 (5) | 0.0636 (4) | |
| C13 | 0.40030 (11) | 0.1037 (3) | 0.30865 (6) | 0.0742 (4) | |
| H13 | 0.458206 | 0.099824 | 0.318772 | 0.089* | |
| C14 | 0.38185 (11) | 0.1635 (3) | 0.26776 (6) | 0.0743 (5) | |
| H14 | 0.427978 | 0.199248 | 0.249575 | 0.089* | |
| C15 | 0.34820 (14) | −0.0249 (3) | 0.38085 (6) | 0.0892 (6) | |
| H15A | 0.365066 | 0.074466 | 0.399619 | 0.134* | |
| H15B | 0.395280 | −0.112843 | 0.379533 | 0.134* | |
| H15C | 0.296011 | −0.082495 | 0.392225 | 0.134* | |
| N1 | 0.39430 (9) | 0.56514 (17) | 0.59169 (4) | 0.0621 (3) | |
| H1 | 0.4169 (11) | 0.458 (2) | 0.5917 (6) | 0.074* | |
| N2 | 0.29813 (8) | 0.17252 (17) | 0.25277 (4) | 0.0623 (3) | |
| H2A | 0.2858 (11) | 0.212 (2) | 0.2254 (5) | 0.075* | |
| N3 | 0.14821 (9) | 0.1412 (2) | 0.26100 (4) | 0.0677 (4) | |
| O1 | 0.40736 (11) | 0.85655 (16) | 0.56980 (5) | 0.0929 (4) | |
| O2 | 0.37639 (8) | 0.67686 (18) | 0.67853 (4) | 0.0767 (4) | |
| O3 | 0.23079 (7) | 0.70195 (18) | 0.67150 (4) | 0.0753 (4) | |
| H3A | 0.1393 (13) | 0.192 (3) | 0.2350 (5) | 0.090* | |
| H3B | 0.1007 (11) | 0.123 (3) | 0.2784 (6) | 0.090* | |
| O4 | 0.58180 (8) | 0.82361 (16) | 0.37897 (4) | 0.0752 (4) | |
| H4A | 0.6302 (14) | 0.835 (3) | 0.3632 (7) | 0.113* | |
| H4B | 0.5816 (16) | 0.926 (3) | 0.3936 (8) | 0.113* | |
| O5 | 0.48776 (8) | 0.5845 (2) | 0.32339 (4) | 0.0810 (4) | |
| H5A | 0.5105 (18) | 0.668 (3) | 0.3383 (9) | 0.122* | |
| H5B | 0.5277 (16) | 0.498 (3) | 0.3257 (9) | 0.122* |
2-Amino-4-methylpyridin-1-ium 2-(phenylformamido)acetate dihydrate. Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| C1 | 0.0790 (9) | 0.0570 (8) | 0.0541 (7) | −0.0026 (6) | −0.0060 (6) | −0.0066 (6) |
| C2 | 0.0823 (11) | 0.0888 (12) | 0.0747 (10) | 0.0142 (9) | 0.0078 (8) | 0.0155 (9) |
| C3 | 0.0814 (11) | 0.1203 (17) | 0.0911 (13) | 0.0221 (11) | 0.0085 (10) | 0.0122 (12) |
| C4 | 0.0799 (11) | 0.1351 (19) | 0.0696 (10) | −0.0122 (12) | 0.0047 (8) | −0.0119 (11) |
| C5 | 0.1157 (16) | 0.1059 (16) | 0.0761 (11) | −0.0271 (14) | 0.0145 (11) | 0.0030 (11) |
| C6 | 0.1159 (15) | 0.0685 (10) | 0.0816 (11) | −0.0032 (10) | 0.0058 (10) | 0.0065 (9) |
| C7 | 0.0876 (10) | 0.0498 (8) | 0.0586 (8) | 0.0082 (7) | −0.0076 (7) | −0.0093 (6) |
| C8 | 0.0699 (9) | 0.0698 (9) | 0.0602 (8) | 0.0084 (7) | −0.0062 (6) | −0.0154 (7) |
| C9 | 0.0645 (8) | 0.0597 (8) | 0.0600 (8) | 0.0067 (6) | −0.0044 (6) | −0.0096 (6) |
| C10 | 0.0623 (8) | 0.0475 (7) | 0.0544 (7) | 0.0030 (5) | 0.0057 (5) | −0.0001 (5) |
| C11 | 0.0690 (8) | 0.0530 (7) | 0.0544 (7) | 0.0020 (6) | 0.0067 (6) | 0.0014 (5) |
| C12 | 0.0738 (9) | 0.0575 (8) | 0.0595 (8) | 0.0052 (6) | −0.0026 (6) | −0.0039 (6) |
| C13 | 0.0642 (8) | 0.0820 (11) | 0.0765 (10) | 0.0032 (7) | −0.0022 (7) | 0.0011 (8) |
| C14 | 0.0621 (8) | 0.0838 (11) | 0.0770 (10) | −0.0003 (7) | 0.0113 (7) | 0.0041 (8) |
| C15 | 0.0932 (12) | 0.1075 (14) | 0.0669 (10) | 0.0085 (11) | −0.0128 (9) | 0.0097 (9) |
| N1 | 0.0744 (8) | 0.0522 (6) | 0.0596 (7) | 0.0106 (5) | −0.0007 (5) | −0.0081 (5) |
| N2 | 0.0652 (7) | 0.0642 (7) | 0.0574 (7) | 0.0041 (5) | 0.0092 (5) | 0.0053 (5) |
| N3 | 0.0623 (7) | 0.0802 (9) | 0.0607 (7) | 0.0035 (6) | 0.0047 (5) | 0.0136 (6) |
| O1 | 0.1266 (11) | 0.0521 (7) | 0.1000 (9) | 0.0204 (6) | 0.0054 (8) | −0.0046 (6) |
| O2 | 0.0679 (7) | 0.0963 (8) | 0.0658 (6) | 0.0137 (5) | −0.0098 (5) | −0.0226 (5) |
| O3 | 0.0647 (7) | 0.0951 (8) | 0.0660 (6) | 0.0101 (5) | −0.0031 (5) | −0.0206 (6) |
| O4 | 0.0689 (7) | 0.0668 (7) | 0.0900 (8) | −0.0026 (5) | 0.0090 (6) | −0.0152 (6) |
| O5 | 0.0726 (7) | 0.0918 (9) | 0.0787 (8) | 0.0119 (6) | −0.0210 (6) | −0.0044 (6) |
2-Amino-4-methylpyridin-1-ium 2-(phenylformamido)acetate dihydrate. Geometric parameters (Å, º)
| C1—C2 | 1.376 (2) | C10—N2 | 1.3439 (18) |
| C1—C6 | 1.383 (3) | C10—C11 | 1.4142 (19) |
| C1—C7 | 1.490 (2) | C11—C12 | 1.359 (2) |
| C2—C3 | 1.385 (3) | C11—H11 | 0.9300 |
| C2—H2 | 0.9300 | C12—C13 | 1.409 (2) |
| C3—C4 | 1.367 (3) | C12—C15 | 1.510 (2) |
| C3—H3 | 0.9300 | C13—C14 | 1.354 (3) |
| C4—C5 | 1.346 (3) | C13—H13 | 0.9300 |
| C4—H4 | 0.9300 | C14—N2 | 1.349 (2) |
| C5—C6 | 1.376 (3) | C14—H14 | 0.9300 |
| C5—H5 | 0.9300 | C15—H15A | 0.9600 |
| C6—H6 | 0.9300 | C15—H15B | 0.9600 |
| C7—O1 | 1.2394 (19) | C15—H15C | 0.9600 |
| C7—N1 | 1.330 (2) | N1—H1 | 0.851 (14) |
| C8—N1 | 1.442 (2) | N2—H2A | 0.904 (15) |
| C8—C9 | 1.526 (2) | N3—H3A | 0.888 (15) |
| C8—H8A | 0.9700 | N3—H3B | 0.903 (15) |
| C8—H8B | 0.9700 | O4—H4A | 0.881 (17) |
| C9—O2 | 1.2377 (18) | O4—H4B | 0.872 (17) |
| C9—O3 | 1.2598 (19) | O5—H5A | 0.834 (17) |
| C10—N3 | 1.3205 (19) | O5—H5B | 0.879 (17) |
| C2—C1—C6 | 117.73 (17) | N3—C10—C11 | 123.54 (13) |
| C2—C1—C7 | 124.01 (14) | N2—C10—C11 | 117.56 (13) |
| C6—C1—C7 | 118.25 (15) | C12—C11—C10 | 120.83 (13) |
| C1—C2—C3 | 120.33 (18) | C12—C11—H11 | 119.6 |
| C1—C2—H2 | 119.8 | C10—C11—H11 | 119.6 |
| C3—C2—H2 | 119.8 | C11—C12—C13 | 119.33 (14) |
| C4—C3—C2 | 120.5 (2) | C11—C12—C15 | 120.87 (15) |
| C4—C3—H3 | 119.8 | C13—C12—C15 | 119.79 (16) |
| C2—C3—H3 | 119.8 | C14—C13—C12 | 118.45 (16) |
| C5—C4—C3 | 119.9 (2) | C14—C13—H13 | 120.8 |
| C5—C4—H4 | 120.0 | C12—C13—H13 | 120.8 |
| C3—C4—H4 | 120.0 | N2—C14—C13 | 121.56 (15) |
| C4—C5—C6 | 120.2 (2) | N2—C14—H14 | 119.2 |
| C4—C5—H5 | 119.9 | C13—C14—H14 | 119.2 |
| C6—C5—H5 | 119.9 | C12—C15—H15A | 109.5 |
| C5—C6—C1 | 121.4 (2) | C12—C15—H15B | 109.5 |
| C5—C6—H6 | 119.3 | H15A—C15—H15B | 109.5 |
| C1—C6—H6 | 119.3 | C12—C15—H15C | 109.5 |
| O1—C7—N1 | 121.22 (17) | H15A—C15—H15C | 109.5 |
| O1—C7—C1 | 121.09 (16) | H15B—C15—H15C | 109.5 |
| N1—C7—C1 | 117.66 (13) | C7—N1—C8 | 121.76 (13) |
| N1—C8—C9 | 115.75 (12) | C7—N1—H1 | 118.4 (13) |
| N1—C8—H8A | 108.3 | C8—N1—H1 | 119.7 (13) |
| C9—C8—H8A | 108.3 | C10—N2—C14 | 122.22 (13) |
| N1—C8—H8B | 108.3 | C10—N2—H2A | 116.2 (11) |
| C9—C8—H8B | 108.3 | C14—N2—H2A | 121.6 (11) |
| H8A—C8—H8B | 107.4 | C10—N3—H3A | 121.3 (13) |
| O2—C9—O3 | 125.66 (13) | C10—N3—H3B | 119.6 (13) |
| O2—C9—C8 | 120.40 (13) | H3A—N3—H3B | 117.8 (19) |
| O3—C9—C8 | 113.94 (13) | H4A—O4—H4B | 102 (2) |
| N3—C10—N2 | 118.90 (13) | H5A—O5—H5B | 101 (3) |
| C6—C1—C2—C3 | 0.9 (3) | N3—C10—C11—C12 | −179.07 (14) |
| C7—C1—C2—C3 | 179.70 (18) | N2—C10—C11—C12 | 1.2 (2) |
| C1—C2—C3—C4 | −0.6 (3) | C10—C11—C12—C13 | 0.4 (2) |
| C2—C3—C4—C5 | −0.3 (3) | C10—C11—C12—C15 | −179.38 (15) |
| C3—C4—C5—C6 | 0.7 (3) | C11—C12—C13—C14 | −1.5 (2) |
| C4—C5—C6—C1 | −0.4 (3) | C15—C12—C13—C14 | 178.29 (17) |
| C2—C1—C6—C5 | −0.5 (3) | C12—C13—C14—N2 | 1.0 (3) |
| C7—C1—C6—C5 | −179.33 (17) | O1—C7—N1—C8 | 2.2 (2) |
| C2—C1—C7—O1 | 161.68 (17) | C1—C7—N1—C8 | −175.96 (12) |
| C6—C1—C7—O1 | −19.5 (2) | C9—C8—N1—C7 | −87.11 (18) |
| C2—C1—C7—N1 | −20.2 (2) | N3—C10—N2—C14 | 178.47 (15) |
| C6—C1—C7—N1 | 158.64 (15) | C11—C10—N2—C14 | −1.8 (2) |
| N1—C8—C9—O2 | −6.4 (2) | C13—C14—N2—C10 | 0.7 (3) |
| N1—C8—C9—O3 | 174.15 (14) |
2-Amino-4-methylpyridin-1-ium 2-(phenylformamido)acetate dihydrate. Hydrogen-bond geometry (Å, º)
| D—H···A | D—H | H···A | D···A | D—H···A |
| O5—H5A···O4 | 0.83 (2) | 2.00 (2) | 2.8225 (18) | 167 (3) |
| N1—H1···O4i | 0.85 (1) | 2.25 (2) | 2.9992 (18) | 148 (2) |
| N2—H2A···O3ii | 0.90 (2) | 1.78 (2) | 2.6850 (17) | 176 (2) |
| N3—H3A···O2ii | 0.89 (2) | 1.99 (2) | 2.8751 (17) | 175 (2) |
| N3—H3B···O5iii | 0.90 (2) | 1.94 (2) | 2.8368 (18) | 171 (2) |
| O4—H4A···O3iv | 0.88 (2) | 1.88 (2) | 2.7392 (17) | 166 (2) |
| O4—H4B···O1v | 0.87 (2) | 1.95 (2) | 2.8173 (18) | 173 (2) |
| O5—H5B···O2i | 0.88 (2) | 1.94 (2) | 2.8061 (18) | 170 (3) |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+1/2, −y+1, z−1/2; (iii) −x+1/2, y−1/2, z; (iv) x+1/2, −y+3/2, −z+1; (v) −x+1, −y+2, −z+1.
References
- Aakeröy, C. B. & Seddon, K. R. (1993). Chem. Soc. Rev.22, 397–407.
- Bedeković, N., Stilinović, V. & Piteša, T. (2017). Cryst. Growth Des.17, 5732–5743. [DOI] [PMC free article] [PubMed]
- Bis, J. A. & Zaworotko, M. J. (2005). Cryst. Growth Des.5, 1169–1179.
- Bruker (2021). APEX4, SAINT and XPREP. Bruker AXS Inc., Madison, Wisconsin, USA.
- Bruno, I. J., Cole, J. C., Edgington, P. R., Kessler, M., Macrae, C. F., McCabe, P., Pearson, J. & Taylor, R. (2002). Acta Cryst. B58, 389–397. [DOI] [PubMed]
- Budzikur, D., Kinzhybalo, V. & Ślepokura, K. (2022). CrystEngComm24, 4417–4429.
- Chadha, R., Singh, P., Khullar, S. & Mandal, S. K. (2016). Cryst. Growth Des.16, 4960–4967.
- Cruz-Cabeza, A. J. (2012). CrystEngComm14, 6362–6365.
- Cruz-Cabeza, A. J., Lusi, M., Wheatcroft, H. P. & Bond, A. D. (2022). Faraday Discuss.235, 446–466. [DOI] [PubMed]
- Desiraju, G. R. (2002). Acc. Chem. Res.35, 565–573. [DOI] [PubMed]
- Farrugia, L. J. (2012). J. Appl. Cryst.45, 849–854.
- Görbitz, C. H. & Sagstuen, E. (2004). Acta Cryst. E60, o1945–o1947.
- Groom, C. R., Bruno, I. J., Lightfoot, M. P. & Ward, S. C. (2016). Acta Cryst. B72, 171–179. [DOI] [PMC free article] [PubMed]
- Hemalatha, B., Suresh, S. & Poomani, K. (2023). Chem. Data Collect. 48, 101100.
- Hemamalini, M. & Fun, H.-K. (2010a). Acta Cryst. E66, o335. [DOI] [PMC free article] [PubMed]
- Hemamalini, M. & Fun, H.-K. (2010b). Acta Cryst. E66, o781–o782. [DOI] [PMC free article] [PubMed]
- Hemamalini, M. & Fun, H.-K. (2010c). Acta Cryst. E66, o1962–o1963. [DOI] [PMC free article] [PubMed]
- Hemamalini, M. & Fun, H.-K. (2010d). Acta Cryst. E66, o2397–o2398. [DOI] [PMC free article] [PubMed]
- Jiang, Q., Ghosh, R. K., Valdivia-Berroeta, G. A., Walder, B. J. & Luo, L. (2025). Cryst. Growth Des.25, 1978–1991.
- Jovita, J. V., Sathya, S., Usha, G., Vasanthi, R. & Ramanand, A. (2014). Acta Cryst. E70, o1036–o1037. [DOI] [PMC free article] [PubMed]
- Khalib, N. C., Thanigaimani, K., Arshad, S. & Razak, I. A. (2013). Acta Cryst. E69, o1120. [DOI] [PMC free article] [PubMed]
- Khalib, N. C., Thanigaimani, K., Arshad, S. & Razak, I. A. (2014). J. Chem. Crystallogr.44, 555–571.
- Konovalova, I. S. & Reiss, G. J. (2025). Crystals15, 700.
- Krause, L., Herbst-Irmer, R., Sheldrick, G. M. & Stalke, D. (2015). J. Appl. Cryst.48, 3–10. [DOI] [PMC free article] [PubMed]
- Kvick, Å. & Noordik, J. (1977). Acta Cryst. B33, 2862–2866.
- Laishram, R., Singh, A. R., Devi, S. S., Thomson, N., Chanu, W. P., Sieroń, L., Maniukiewicz, W. & Lonibala, R. (2025). Polyhedron280, 117682.
- Li, W., Dong, H., Niu, K., Wang, H.-Y., Cheng, W., Song, H., Ying, A.-K., Zhai, X., Li, K., Yu, H., Guo, D.-S. & Wang, Y. (2024). Talanta278, 126480. [DOI] [PubMed]
- Macrae, C. F., Sovago, I., Cottrell, S. J., Galek, P. T. A., McCabe, P., Pidcock, E., Platings, M., Shields, G. P., Stevens, J. S., Towler, M. & Wood, P. A. (2020). J. Appl. Cryst.53, 226–235. [DOI] [PMC free article] [PubMed]
- Reena, P., Joema, S. E., Gunasekaran, B., Sindhusha, S., Sabari Girisun, T. C. & Darling, D. A. (2022). Opt. Mater.132, 112749.
- Seth, S. K., Bauzá, A. & Frontera, A. (2018). New J. Chem.42, 12134–12142.
- Sheldrick, G. M. (2015a). Acta Cryst. A71, 3–8.
- Sheldrick, G. M. (2015b). Acta Cryst. C71, 3–8.
- Spek, A. L. (2020). Acta Cryst. E76, 1–11. [DOI] [PMC free article] [PubMed]
- Suganya, S., Saravanan, K., Jaganathan, R. & Kumaradhas, P. (2021). Acta Cryst. C77, 790–799. [DOI] [PubMed]
- Turner, M., McKinnon, J., Wolff, S., Grimwood, D., Spackman, P., Jayatilaka, D. & Spackman, M. (2017). University of Western Australia.
- Vetrivel, V., Balakrishnan, T. & Marimuthu, N. (2025). Acta Cryst. E81, 1189–1194. [DOI] [PMC free article] [PubMed]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I. DOI: 10.1107/S2056989026004846/hb8212sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989026004846/hb8212Isup2.hkl
Supporting information file. DOI: 10.1107/S2056989026004846/hb8212Isup3.cml
CCDC reference: 2552915
Additional supporting information: crystallographic information; 3D view; checkCIF report





