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PLOS One logoLink to PLOS One
. 2026 Jul 6;21(7):e0352690. doi: 10.1371/journal.pone.0352690

Age and tumor size as independent predictors of malignancy in BI-RADS 4 and 5 breast lesions: A cross-sectional study in Vietnam

De Van Nguyen 1, Trung Van Pham 2, Tam Huu Dinh 1, Dung Ngoc Tran 3,*, Chung Thanh Dang 3,*
Editor: Dongling Wu4
PMCID: PMC13336213  PMID: 42406726

Abstract

Background

Accurate diagnosis of suspicious breast lesions (BI-RADS 4/5) is crucial for appropriate clinical management. The International Academy of Cytology (IAC) Yokohama System standardizes fine-needle aspiration (FNA) cytology reporting, but its performance and the role of independent clinical predictors within this specific high-risk cohort require further investigation. This study aimed to evaluate the diagnostic performance of FNA using the Yokohama system and to identify independent predictors of malignancy in patients with BI-RADS 4 and 5 lesions.

Methods and findings

We conducted a cross-sectional study of 104 female patients with BI-RADS 4/5 breast lesions at two tertiary hospitals in Vietnam. All patients underwent ultrasound-guided FNA with subsequent histopathological examination as the gold standard. Diagnostic performance metrics were calculated. Univariate and multivariate logistic regression analyses were performed to identify independent predictors of malignancy. Of the 104 lesions, 53 (51.0%) were confirmed to be malignant. FNA cytology, interpreted with the Yokohama System, demonstrated a sensitivity of 92.5%, specificity of 96.1%, and an overall accuracy of 94.2%. In the multivariate analysis, only two factors emerged as strong, independent predictors of malignancy: older age (adjusted odds ratio [aOR] 1.13 per year, 95% CI: 1.07–1.19; p < 0.001) and larger tumor size (aOR 1.10 per mm, 95% CI: 1.04–1.16; p = 0.001). Notably, the predictive value of a BI-RADS 5 classification was not statistically significant after this adjustment (p = 0.540). However, given the small BI-RADS 5 subgroup (n = 11), this non-significant result should not be interpreted as evidence of its lack of clinical utility, as the analysis was likely underpowered for this specific variable.

Conclusion

FNA cytology, when interpreted using the IAC Yokohama System, is a highly accurate and reliable tool for the initial evaluation of BI-RADS 4 and 5 breast lesions. Importantly, our findings demonstrate that older age and larger tumor size are strong, independent predictors of malignancy in this high-risk cohort, highlighting the need to integrate these clinical parameters to optimize risk stratification.

Introduction

Breast cancer remains a significant global health burden and is the leading cause of cancer-related incidence among women worldwide and in Vietnam [1]. The cornerstone of effective management is accurate and timely diagnosis, which relies on the “triple assessment” approach: clinical examination, imaging, and pathological evaluation [2]. Within this framework, ultrasound is a critical imaging modality, and the Breast Imaging Reporting and Data System (BI-RADS) is universally used to standardize risk stratification [3]. Lesions classified as BI-RADS 4 (suspicious) and 5 (highly suggestive of malignancy) represent a particularly challenging cohort, requiring definitive pathological confirmation.

Fine-needle aspiration (FNA) cytology is a minimally invasive, rapid, and cost-effective procedure widely utilized for the initial pathological assessment of these suspicious lesions [4,5]. However, variability in cytological interpretation has historically been a limitation. To address this, the International Academy of Cytology (IAC) developed the Yokohama System, a standardized five-tiered reporting framework that categorizes breast cytology findings and links them to a specific risk of malignancy (ROM), thereby guiding clinical management [6].

While the diagnostic accuracy of the IAC Yokohama System has been validated in general populations [7], a critical knowledge gap remains. Its diagnostic precision within the challenging, pre-selected cohort of BI-RADS 4 and 5 lesions – where the pre-test probability of malignancy is already high – is less understood. This distinction is crucial, as a tool’s utility can differ significantly in a screening population versus a high-risk, diagnostic population. Furthermore, it is crucial to understand the interplay of other clinical and imaging factors that may independently predict malignancy in these patients, as this could help refine diagnostic pathways beyond cytology alone. Identifying robust, independent predictors could empower clinicians to better counsel patients on their individualized risk and to make more informed decisions-for instance, justifying an immediate excisional biopsy over a core needle biopsy in a patient with multiple high-risk features [8].

To address these gaps, this study aimed to: (1) evaluate the diagnostic performance of FNA cytology using the IAC Yokohama System in patients with breast lesions classified as BI-RADS 4 and 5; and (2) identify the independent clinical and imaging predictors of malignancy within this specific high-risk population.

Methods

Study design and population

This study was designed, conducted, and reported in accordance with the Strengthening the Reporting of Observational Studies in Epidemiology (STROBE) guidelines (S1 Checklist).

We conducted a cross-sectional study, incorporating both retrospective and prospective data collection, was conducted at the Departments of Pathology of two major tertiary referral hospitals in Hanoi, Vietnam: the Military Hospital 103 and the 108 Military Central Hospital. We reviewed cases from January 2021 to September 2023.

The study population included female patients who presented with a breast lesion classified as BI-RADS category 4 or 5 on ultrasound examination, according to the American College of Radiology (ACR) BI-RADS Atlas [3]. Inclusion criteria were: (1) having undergone both ultrasound-guided FNA and subsequent histopathological examination (either core needle biopsy or excisional biopsy); and (2) having complete clinical records and available pathology slides for review. Patients with recurrent breast cancer or metastatic cancer to the breast from another primary site were excluded. A total of 104 patients with 104 corresponding lesions met the criteria and were included in the final analysis.

Procedures and pathological evaluation

All patients underwent ultrasound-guided FNA performed by experienced radiologists or pathologists. The aspirated material was smeared onto glass slides, air-dried for Diff-Quik staining, and/or wet-fixed in 95% ethanol for Papanicolaou staining. The cytology slides were reviewed and classified by at least two pathologists according to the five-tiered International Academy of Cytology (IAC) Yokohama System [6]. Any discordant cases were resolved by consensus discussion or, if needed, adjudicated by a third senior pathologist.

The corresponding histopathological specimens were fixed in 10% neutral buffered formalin, processed, and embedded in paraffin. Sections were cut and stained with hematoxylin and eosin (H&E). The final histopathological diagnosis served as the gold standard and was categorized as either benign or malignant based on the 2019 World Health Organization (WHO) Classification of Breast Tumours [9].

Statistical analysis

Continuous variables were presented as mean ± standard deviation (SD) and compared using the independent samples t-test. Categorical variables were presented as frequencies and percentages (n, %) and compared using the Chi-square test or Fisher’s exact test, as appropriate. The 95% confidence intervals (CIs) for diagnostic performance metrics and malignancy risks were calculated using the Wilson score interval method, which is suitable for small sample sizes.

To identify independent predictors of malignancy, univariate and multivariate logistic regression analyses were performed. The dependent variable was the final histopathological diagnosis (0 = Benign, 1 = Malignant). Independent variables included patient age (continuous), tumor size in millimeters (continuous), and BI-RADS classification (4 vs. 5). Variables for the multivariate model were selected based on their statistical significance in the univariate analysis (p < 0.05) and their established clinical relevance in breast cancer risk assessment. Odds ratios (OR), adjusted odds ratios (aOR), and their corresponding 95% confidence intervals (CI) were calculated.

A post-hoc power calculation was performed based on the observed effect sizes (Cohen’s d) derived from the differences in means between the malignant and benign groups. For tumor size (observed d ≈ 0.64), the analysis yielded a statistical power of 89.5% at a significance level of 0.05. For patient age (observed d ≈ 0.48), the calculated power was 67.2%.

A two-sided p-value < 0.05 was considered statistically significant. All statistical analyses were performed using SPSS Statistics for Windows, Version 22.0 (IBM Corp., Armonk, NY, USA).

The primary analysis classified Categories IV (Suspicious for Malignancy) and V (Malignant) as test-positive, and Categories II (Benign) and III (Atypical) as test-negative, consistent with the IAC Yokohama System framework, in which Category III carries a low risk of malignancy (ROM = 6.7%; 95% CI: 0.2–31.9) and is recommended for follow-up or repeat FNA rather than immediate surgical intervention. Two pre-specified sensitivity analyses were performed to assess the robustness of this classification scheme (S4 Table).

Ethical considerations

This study was conducted in accordance with the principles of the Declaration of Helsinki [10]. The study protocol was reviewed and approved by the Institutional Review Board of the 103 Military Hospital (Decision No. 2030/HĐĐĐ, dated June 23, 2022). Data for this retrospective analysis were accessed from July 2022 to September 2023. As the study involved the analysis of existing clinical and pathological data, the requirement for individual patient consent was waived by the review board. All patient-identifying information was anonymized prior to analysis to ensure confidentiality.

Results

Patient and lesion characteristics

A total of 104 female patients with 104 breast lesions classified as BI-RADS 4 or 5 were included. The final histopathological diagnosis confirmed malignancy in 53 lesions (51.0%) and benign findings in 51 (49.0%).

As summarized in Table 1, patients with malignant lesions were significantly older (p = 0.011) and presented with larger tumors compared to those with benign lesions (p = 0.003 and p = 0.042, respectively). The upper-outer quadrant was the most common tumor location (46.2%). The specific histopathological diagnoses for all lesions, including individual benign entities and a distinction between in situ and invasive malignancies, are provided in S3 Table.

Table 1. Baseline characteristics of patients and lesions stratified by final histopathological diagnosis.

Characteristic Benign (n = 51) Malignant (n = 53) Total (n = 104) p-value
Age (years), mean ± SD 43.9 ± 16.5 51.2 ± 14.1 47.6 ± 15.6 0.011 a
Lesion Size (mm), mean ± SD 17.3 ± 9.8 25.2 ± 14.5 21.4 ± 12.9 0.003 a
Lesion Size Category, n (%) 0.042 b
  ≤ 10 mm, n (%) 11 (21.6) 4 (7.5) 15 (14.4)
  > 10 mm, n (%) 40 (78.4) 49 (92.5) 89 (85.6)
BI-RADS Classification, n (%) 0.005 b
 BI-RADS 4 50 (98.0) 43 (81.1) 93 (89.4)
 BI-RADS 5 1 (2.0) 10 (18.9) 11 (10.6)
Tumor Location, n (%) 0.033 b
 Upper-outer 25 (49.0) 23 (43.4) 48 (46.2)
 Upper-inner 16 (31.4) 9 (17.0) 25 (24.0)
 Lower-outer 8 (15.7) 8 (15.1) 16 (15.4)
 Lower-inner 2 (3.9) 9 (17.0) 11 (10.6)
 Areolar/Nipple 0 (0.0) 4 (7.5) 4 (3.8)

SD: Standard Deviation; BI-RADS: Breast Imaging Reporting and Data System. (a) independent t-test; (b) Chi-square test or Fisher’s exact test.

Cytological diagnosis and diagnostic performance

Cytological analysis using the IAC Yokohama System classified 49.0% of lesions as either suspicious for malignancy (Category IV, 45.2%) or malignant (Category V, 3.8%). The distribution across all categories is detailed in Table 2, which also shows the risk of malignancy (ROM) for each category. The ROM for Category IV and V were 95.7% and 100%, respectively. Key cytological features observed in malignant cases included enlarged/pleomorphic nuclei (79.2%), absent or rare myoepithelial cells (75.5%), and prominent nucleoli (56.6%) (Fig 1).

Table 2. Correlation between fine-needle aspiration cytology (IAC Yokohama System) and final histopathology.

IAC Yokohama Category Histopathology: Benign (n = 51) Histopathology: Malignant (n = 53) Total (n = 104) Risk of Malignancy % (95% CI)
II: Benign 35 3 38 7.9 (1.7–21.4)
III: Atypical 14 1 15 6.7 (0.2–31.9)
IV: Suspicious for Malignancy 2 45 47 95.7 (85.5–99.5)
V: Malignant 0 4 4 100.0 (51.0–100.0)

IAC: International Academy of Cytology; CI: Confidence Interval. Risk of Malignancy calculated as (Malignant cases/ Total cases in category) × 100. 95% CIs were calculated using the Wilson score interval method.

Fig 1. Representative cytological and corresponding histopathological images.

Fig 1

(A) Benign (Category II): A large, cohesive, branching sheet of ductal epithelial cells with scattered myoepithelial cells. The corresponding histology shows a fibroadenoma with compressed ducts and fibrous stroma. (B) Atypical (Category III): A moderately cellular smear showing discohesive ductal cells with mild nuclear pleomorphism and prominent nucleoli. The corresponding histology reveals an intraductal papilloma. (C) Suspicious for Malignancy (Category IV): A crowded, three-dimensional cluster of ductal cells with enlarged, overlapping nuclei and irregular nuclear contours. The corresponding histology shows ductal carcinoma in situ with a cribriform pattern. (D) Malignant (Category V): A highly cellular smear composed of discohesive, pleomorphic malignant cells with scant cytoplasm and coarse chromatin. The corresponding histology confirms invasive carcinoma of no special type, characterized by nests and cords of tumor cells infiltrating a desmoplastic stroma. Cytology panels (left column) are Diff-Quik stained; histopathology panels (right column) are H&E stained. Scale bar = 100 µm.

For the purpose of calculating diagnostic performance, Categories IV and V were considered positive results. The overall sensitivity of FNA was 92.5% (95% CI: 82.1–97.9) and specificity was 96.1% (95% CI: 86.5–99.5). The positive and negative predictive values were 96.1% and 92.5%, respectively. The overall accuracy was 94.2% (Table 3). Results were consistent across two pre-specified sensitivity analyses; full details are provided in S4 Table.

Table 3. Diagnostic performance of fine-needle aspiration cytology for malignancy.

Diagnostic Metric Value (%) 95% Confidence Interval
Sensitivity 92.5 82.1–97.9
Specificity 96.1 86.5–99.5
Positive Predictive Value (PPV) 96.1 86.5–99.5
Negative Predictive Value (NPV) 92.5 82.1–97.9
Accuracy 94.2 88.1–97.8

Categories IV (Suspicious) and V (Malignant) were classified as positive; Categories II (Benign) and III (Atypical) were classified as negative.

Independent predictors of malignancy

While univariate analysis identified older age, larger tumor size, and a BI-RADS 5 classification as significant predictors of malignancy, only two factors retained statistical significance in the multivariate model. Older age (aOR 1.13, 95% CI: 1.07–1.19; p < 0.001) and larger tumor size (aOR 1.10, 95% CI: 1.04–1.16; p = 0.001) emerged as strong and independent predictors. The predictive value of a BI-RADS 5 classification was not statistically significant after adjusting for age and tumor size (p = 0.540) (Table 4).

Table 4. Univariate and multivariate logistic regression analysis of predictors for malignancy.

Predictor Variable Crude OR (95% CI) p-value Adjusted aOR (95% CI) p-value
Age (per 1-year increase) 1.10 (1.06–1.15) <0.001 1.13 (1.07–1.19) <0.001
Tumor Size (per 1-mm increase) 1.06 (1.02–1.10) 0.006 1.10 (1.04–1.16) 0.001
BI-RADS 5 (vs. BI-RADS 4) 11.63 (1.43–94.54) 0.022 2.10 (0.20–22.73) 0.540

OR, Odds Ratio; aOR, Adjusted Odds Ratio; CI, Confidence Interval; BI-RADS, Breast Imaging Reporting and Data System. The adjusted odds ratios were derived from a single multivariate logistic regression model that included age, tumor size, and BI-RADS classification simultaneously.

Discussion

This study confirms the high diagnostic utility of fine-needle aspiration (FNA) cytology, when applying the IAC Yokohama System, for risk stratification of suspicious breast lesions classified as BI-RADS 4 and 5. Our key findings demonstrate that while FNA provides excellent sensitivity and specificity, the most robust independent predictors of malignancy in this high-risk cohort are older age and larger tumor size. Notably, the BI-RADS 5 classification-while highly predictive on its own-lost its independent predictive power after adjusting for these two fundamental clinical variables.

The overall diagnostic performance of FNA in our study (sensitivity 92.5%, specificity 96.1%) is consistent with the high accuracy reported in a growing body of international literature. A comprehensive review by Hoda et al. reported a pooled sensitivity and specificity of 96.3% and 98.8% [7], and our results closely mirror findings from large institutional studies in Italy, India, and the United States, confirming the system’s robust reproducibility across diverse populations [11–14].

The risk of malignancy (ROM) for each cytological category in our cohort also aligns with established benchmarks. The ROM for our ‘Suspicious for Malignancy’ (Category IV) and ‘Malignant’ (Category V) groups were 95.7% and 100%, respectively. These findings reinforce that such cytological results are highly indicative of cancer and warrant definitive histopathological examination, a conclusion supported by multiple validation studies [11,15]. This underscores the system’s reliability and applicability within the Vietnamese clinical context for guiding patient management.

The most significant finding of our study emerged from the multivariate analysis. While older age and larger tumor size are well-established risk factors for breast cancer [16,17], our model demonstrates they are powerful independent predictors that can overshadow the predictive value of BI-RADS classification in a pre-selected high-risk population.

The finding that BI-RADS 5 lost its statistical significance (p = 0.540) after adjusting for age and tumor size is particularly intriguing. This suggests that the morphological features on ultrasound that lead to a BI-RADS 5 classification (e.g., spiculation, irregular shape, posterior acoustic shadowing) may be biologically linked to the characteristics of tumors that develop in older women or that have grown to a larger size. Indeed, studies have shown that tumor size is a strong determinant of sonographic features, with larger tumors more likely to exhibit malignant characteristics [18–20].

Therefore, it is plausible that in a multivariate context, age and size act as more fundamental proxies for the underlying tumor biology. The sonographic features defining BI-RADS 5 may simply be the morphological manifestations of tumors that have had more time to grow (larger size) in a host environment conducive to progression (older age), thereby making age and size the more direct measures of malignant potential. This phenomenon, where clinical or pathological variables can attenuate the significance of imaging scores, highlights the importance of multi-faceted risk assessment [18,21,22].

Our study has several strengths. It is one of the first in Vietnam to rigorously evaluate the Yokohama system within a specific, clinically relevant cohort of BI-RADS 4 and 5 lesions. Furthermore, the use of multivariate logistic regression provides a deeper, more nuanced understanding of the interplay between clinical, imaging, and cytological factors.

However, we must also acknowledge certain limitations, as recommended by the STROBE guidelines [18,23]. First, the study was conducted at two major tertiary centers, which may limit the generalizability of our findings to provincial or community-level healthcare settings. Second, our sample size (n = 104), particularly for the BI-RADS 5 subgroup (n = 11), is relatively small. Retroactive expansion of the dataset was not feasible due to our strict inclusion criteria requiring matched high-quality FNA and definitive histopathology to ensure diagnostic accuracy. A post-hoc power analysis indicated that while the study achieved robust statistical power for tumor size (89.5%), the power for patient age was moderate (67.2%), and the BI-RADS 5 subgroup remained underpowered. This limitation resulted in wide confidence intervals for BI-RADS 5 in the multivariate model, raising the possibility of a Type II error for this specific variable [24]. Consequently, findings regarding the loss of independent predictive value for BI-RADS 5 should be interpreted as preliminary. Third, although cytological slides were reviewed by two pathologists with a consensus approach for discordant cases, potential interobserver variability remains an inherent limitation of morphological assessment. Fourth, subcategory data for BI-RADS 4 lesions (4A, 4B, and 4C) were unavailable, as structured subcategory reporting was not consistently documented in the institutional radiology records during the retrospective data collection period (2021–2023). This limits the granularity of the BI-RADS analysis, as the three BI-RADS 4 subcategories carry substantially different risks of malignancy (4A: ≥ 2% to <10%; 4B: ≥ 10% to ≤50%; 4C: > 50% to <95%). Future prospective studies should incorporate BI-RADS 4 subcategory classification to enable a more refined analysis of imaging-based malignancy predictors within this heterogeneous group.

Our findings have important clinical implications. FNA cytology based on the Yokohama system is a robust and reliable tool for the initial assessment of high-risk breast lesions in Vietnam. Clinicians and pathologists should recognize that for lesions already classified as BI-RADS 4 or 5, patient age and tumor size are potent, independent indicators of malignancy. This finding suggests that in resource-limited settings where further molecular testing may not be immediately available, these readily accessible clinical parameters can significantly aid in counseling patients and prioritizing cases for expedited biopsy or surgical consultation. This highlights the necessity of integrating clinical data with imaging and cytology for the most accurate risk assessment, a principle supported by major clinical guidelines such as those from the NCCN and ASCO [25,26]. Future research should include larger, multi-center prospective studies to validate our findings on the predictive roles of these variables and explore their molecular profiles [27].

Conclusion

In patients with suspicious breast lesions classified as BI-RADS 4 and 5, fine-needle aspiration cytology evaluated by the IAC Yokohama System is a highly accurate and reliable diagnostic tool. Importantly, our findings demonstrate that older age and larger tumor size are strong, independent predictors of malignancy in this high-risk cohort. These results suggest that in resource-limited settings like Vietnam, where molecular testing may not be immediately available, integrating these readily accessible clinical parameters with imaging and cytology is essential for optimizing risk stratification. Of note, the non-significant result for BI-RADS 5 in the multivariate model (p = 0.540; aOR 2.10, 95% CI: 0.20–22.73) should not be interpreted as evidence that BI-RADS 5 classification lacks clinical value; rather, it reflects the limited statistical power of the small BI-RADS 5 subgroup (n = 11), which rendered this estimate susceptible to Type II error. This approach can help clinicians prioritize patients for expedited biopsy or surgical intervention, ensuring timely and appropriate management.

Supporting information

S1 Checklist. STROBE Checklist.

(DOC)

pone.0352690.s001.doc (91.5KB, doc)
S2 Dataset. Anonymized dataset; Age column hidden.

No personal identifiers present.

(XLSX)

pone.0352690.s002.xlsx (17.8KB, xlsx)
S3 Table. Histopathological diagnoses of 104 breast lesions classified according to the WHO Classification of Breast Tumours (2019).

(DOCX)

pone.0352690.s003.docx (28.5KB, docx)
S4 Table. Sensitivity analyses for diagnostic performance of FNA cytology under alternative Category III classification schemes.

(DOCX)

pone.0352690.s004.docx (28.8KB, docx)

Acknowledgments

The authors would like to thank the staff of the Departments of Pathology at Military Hospital 103 and 108 Military Central Hospital for their technical assistance and support during data collection.

Data Availability

The minimal dataset underlying this study’s findings is not publicly available due to ethical restrictions and the protection of patient confidentiality. Researchers who meet the criteria for access to confidential data may request the data from the Institutional Review Board of 103 Military Hospital. All data access requests should be formally submitted to the hospital administration via email at hospital103@benhvien103.vn.

Funding Statement

The author(s) received no specific funding for this work.

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PLoS One. 2026 Jul 6;21(7):e0352690. doi: 10.1371/journal.pone.0352690.r001

Author response to Decision Letter 0


Transfer Alert

This paper was transferred from another journal. As a result, its full editorial history (including decision letters, peer reviews and author responses) may not be present.

16 Sep 2025

Decision Letter 0

Dongling Wu

19 Jan 2026

-->PONE-D-25-49862-->-->Age and Tumor Size as Independent Predictors of Malignancy in BI-RADS 4 and 5 Breast Lesions: A Crosssectional Study in Vietnam-->-->PLOS One

Dear Dr. Dang,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.-->

  • In general, this is a very well written manuscript, however, the sample size of the study is small, making the results questionable. In this revision, I highly recommend you to include more years of data and cases to make the study reliable.

-->Please submit your revised manuscript by Mar 05 2026 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

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We look forward to receiving your revised manuscript.

Kind regards,

Dongling Wu

Academic Editor

PLOS One

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Additional Editor Comments:

This is a well-written manuscript. However, one of the major drawbacks of this study is the limited sample size especially the malignancy group making the results questionable. I highly recommend the author group, in this revision, to include more cases (looking back more years' data) for a more reliable result.

[Note: HTML markup is below. Please do not edit.]

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Reviewer's Responses to Questions

-->Comments to the Author

1. Is the manuscript technically sound, and do the data support the conclusions?

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Reviewer #1: Partly

Reviewer #2: Yes

**********

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Reviewer #1: Yes

Reviewer #2: Yes

**********

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Reviewer #1: No

Reviewer #2: Yes

**********

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Reviewer #2: Yes

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Reviewer #1:  The sample size is small (104 lesions) and key subgroups particularly BI-RADS 5 lesions are underpowered as reflected by extremely wide confidence intervals in the multivariate analysis. No sample size justification or power calculation is provided, raising concerns about Type II errors and the reliability of reported associations.

Reviewer #2:  The manuscript is very well written, the methodology is well conducted, and the work is robust. I offer a few recommendations. Some paragraphs (especially in the Discussion) are long and could be made slightly more objective. The manuscript alternates between shorter sentences and some very long ones; a few of these could be broken up to improve readability.

I also suggest reinforcing clarity in the tables. In Table 1, the positioning of the p-values could be reorganized to make the layout visually cleaner. In Table 2, it may be useful to include the exact ROM values with their confidence intervals, should the authors wish to strengthen the presentation.

Although the limitations are already well described, the authors could consider adding: the potential bias associated with conducting the study in tertiary centers, and the possibility of interobserver variability in cytology interpretation (even though consensus among pathologists was used).

Finally, consider adding a concluding paragraph that more explicitly reinforces the clinical applicability of the findings.

**********

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Reviewer #2: No

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PLoS One. 2026 Jul 6;21(7):e0352690. doi: 10.1371/journal.pone.0352690.r003

Author response to Decision Letter 1


29 Jan 2026

January 26, 2026

Ref: PONE-D-25-49862 Title: Age and tumor size as independent predictors of malignancy in BI-RADS 4 and 5 breast lesions: A cross-sectional study in Vietnam

Dear Dr. Dongling Wu and Reviewers,

We would like to express our sincere gratitude for the time and effort you have dedicated to reviewing our manuscript. We appreciate the insightful comments and constructive suggestions, which have helped us significantly improve the quality and rigor of our study.

We have carefully reviewed all points raised. In this revised version, we have addressed the concerns regarding sample size by providing a post-hoc power analysis and clarifying our strict inclusion criteria. We have also complied with PLOS ONE’s data policy by uploading a minimal underlying dataset (S2 Dataset).

Below is our point-by-point response to the specific comments.

RESPONSE TO JOURNAL REQUIREMENTS

1. PLOS ONE Style Requirements

Comment: Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming.

Response: We have reviewed the PLOS ONE style templates and formatted our manuscript accordingly. Specifically, we have adjusted the headings (Level 1 in 18pt bold), figure citations, and reference style to meet the journal's guidelines.

2. STROBE Checklist

Comment: Please include a copy of S1 Checklist. STROBE Checklist which you refer to in your text.

Response: We have completed the STROBE Checklist with page numbers indicating where each item is addressed in the revised manuscript. This file has been uploaded as S1 Checklist.

3. Data Availability

Comment: “Have the authors made all data underlying the findings in their manuscript fully available?” is not sufficient.

Response: We apologize for the initial restriction. We have now prepared a de-identified minimal dataset containing the values behind the means, standard deviations, and other measures reported. This dataset complies with ethical standards for patient anonymity and has been uploaded as a Supporting Information file labeled ‘S2 Dataset’. The Data Availability Statement within the manuscript has been updated accordingly.

RESPONSE TO REVIEWER #1

Comment 1: Sample size and Statistical power

Reviewer #1: The sample size is small (104 lesions) and key subgroups particularly BI-RADS 5 lesions are underpowered as reflected by extremely wide confidence intervals in the multivariate analysis. No sample size justification or power calculation is provided, raising concerns about Type II errors and the reliability of reported associations.

Response: We thank the reviewer for this critical assessment. We agree that the sample size, particularly for the BI-RADS 5 subgroup (n=11), is a limitation. Regarding the suggestion to include more years of data, we evaluated this possibility but found it unfeasible due to our strict inclusion criteria, which required matched high-quality ultrasound-guided FNA and definitive histopathology (biopsy/surgery) for every patient to ensure diagnostic accuracy. Extending the timeframe retrospectively would have compromised data completeness and quality due to administrative limitations on older physical records.

However, to address the concern regarding Type II errors and reliability, we have performed a post-hoc power analysis based on the observed effect sizes in our study (added to Methods, Page 6-7, Lines: 113-116)

- For tumor size: The observed effect size was medium-to-large (≈ 0.64). Our analysis indicates the study achieved a statistical power of 89.5% (α=0.05) to detect this primary predictor. This suggests the finding regarding tumor size is robust.

- For patient age: The observed effect size was moderate (≈ 0.48), yielding a power of 67.2%. While slightly below the conventional 80%, the significant association (p = 0.003) suggests a detectable signal in our population.

We have also revised the Discussion section (Pages 14, Lines 219-228) to explicitly acknowledge that the BI-RADS 5 subgroup is underpowered, leading to wide confidence intervals, and that findings regarding this specific subgroup should be interpreted as preliminary.

Comment 2: Data Availability

Reviewer #1: Have the authors made all data underlying the findings in their manuscript fully available? No.

Response: As mentioned in the response to the Journal Requirements, we have now uploaded the fully anonymized minimal dataset as S2 Dataset.

RESPONSE TO REVIEWER #2

Comment 1: Methodology and Writing

Reviewer #2: The manuscript is very well written, the methodology is well conducted, and the work is robust. I offer a few recommendations.

Response: We are grateful for the reviewer’s positive evaluation of our work and the helpful recommendations to improve the manuscript’s readability.

Comment 2: Paragraph Length and Readability

Reviewer #2: Some paragraphs (especially in the Discussion) are long and could be made slightly more objective. The manuscript alternates between shorter sentences and some very long ones; a few of these could be broken up to improve readability.

Response: We have reviewed the Discussion section and broken down long paragraphs and complex sentences to improve flow and clarity, as suggested. (See changes on Pages 12, 13, 14).

Comment 3: Table Clarity

Reviewer #2: In Table 1, the positioning of the p-values could be reorganized to make the layout visually cleaner. In Table 2, it may be useful to include the exact ROM values with their confidence intervals, should the authors wish to strengthen the presentation.

Response:

- Table 1: We have reorganized the layout of Table 1. P-values are now presented in a dedicated column on the right side to improve readability and visual alignmen (Pages 8 - 9).

- Table 2: We have calculated the 95% Confidence Intervals (CI) for the Risk of Malignancy (ROM) using the Wilson score interval method (appropriate for small sample sizes). These values have been added to the last column of Table 2 (Page 9).

Comment 4: Limitations (Tertiary Centers & Interobserver Variability)

Reviewer #2: Although the limitations are already well described, the authors could consider adding: the potential bias associated with conducting the study in tertiary centers, and the possibility of interobserver variability in cytology interpretation (even though consensus among pathologists was used).

Response: We agree these are important points.

- We have reinforced the statement regarding the tertiary center bias (Page 14, Lines 218-219).

- We have added a sentence to the Limitations section acknowledging the potential for interobserver variability in cytology interpretation, despite our consensus method (Page 14, Lines 228-230).

Comment 5: Clinical Applicability

Reviewer #2: Finally, consider adding a concluding paragraph that more explicitly reinforces the clinical applicability of the findings.

Response: We have revised the Conclusion to explicitly state the clinical implication: in resource-limited settings like Vietnam, integrating Age and Tumor Size into the risk assessment of BI-RADS 4/5 lesions can help clinicians prioritize patients for urgent intervention. (Page 15, Lines 247-251).

Sincerely,

Assoc. Prof. Dang Thanh Chung, MD, PhD

On behalf of the co-authors

Vice Head, Department of Pathology and Forensic Medicine Military Hospital 103,

Vietnam Military Medical University Hanoi, Vietnam

dangthanhchung@vmmu.edu.vn

Attachment

Submitted filename: Response to Reviewers.doc

pone.0352690.s005.doc (51KB, doc)

Decision Letter 1

Dongling Wu

22 May 2026

-->PONE-D-25-49862R1-->-->Age and tumor size as independent predictors of malignancy in BI-RADS 4 and 5 breast lesions: A cross-sectional study in Vietnam-->-->PLOS One

Dear Dr.  Dang,

Thank you for submitting your manuscript to PLOS ONE and thank you for your patience. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

Please submit your revised manuscript by Jul 06 2026 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

Please include the following items when submitting your revised manuscript:-->

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-->

If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter.

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We look forward to receiving your revised manuscript.

Kind regards,

Dongling Wu

Academic Editor

PLOS One

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Reviewer #2: All comments have been addressed

Reviewer #3: (No Response)

**********

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Reviewer #3: Yes

**********

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Reviewer #2: Yes

Reviewer #3: Yes

**********

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Reviewer #2: Yes

Reviewer #3: Yes

**********

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Reviewer #3: Yes

**********

-->6. Review Comments to the Author

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Reviewer #2: The authors addressed all comments satisfactorily and improved the manuscript, particularly regarding the clarity of the writing and the transparency of the presented data.

Reviewer #3: The revised manuscript is clinically relevant and generally well organized. The authors have strengthened the revision by adding confidence intervals, post hoc power information, limitations related to the small BI-RADS 5 subgroup, and clearer clinical applicability.

Several points:

1. The manuscript would be stronger if the authors provided a table summarizing the histopathologic diagnoses, including benign entities, DCIS, invasive carcinoma of no special type, special histologic types if present, and whether malignant cases were invasive or in situ.

2. Similarly, if available, BI-RADS 4 should be subdivided into 4A, 4B, and 4C. Without this, the BI-RADS 4 group is heterogeneous, and the clinical meaning of comparing BI-RADS 4 versus BI-RADS 5 is limited.

3. The authors classified Categories IV and V as positive, and Categories II and III as negative for diagnostic performance calculations. This approach may underestimate the clinical uncertainty associated with “atypical” cytology. The authors should justify this decision and ideally provide sensitivity analyses: one excluding Category III cases and another treating Category III as a test-positive or indeterminate result. This would make the reported sensitivity, specificity, PPV, NPV, and accuracy more transparent.

4. The multivariate model includes age, tumor size, and BI-RADS classification, but the BI-RADS 5 subgroup is very small: only 11 cases, including 10 malignant and 1 benign lesion. Please pay attention. At minimum, the paper should state that the nonsignificant BI-RADS 5 result should not be interpreted as evidence that BI-RADS 5 lacks clinical value.

**********

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Reviewer #2: No

Reviewer #3: No

**********

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PLoS One. 2026 Jul 6;21(7):e0352690. doi: 10.1371/journal.pone.0352690.r005

Author response to Decision Letter 2


27 May 2026

May 27, 2026

Ref: PONE-D-25-49862R1

Title: Age and tumor size as independent predictors of malignancy in BI-RADS 4 and 5 breast lesions: A cross-sectional study in Vietnam

Journal: PLOS ONE

Dear Dr. Dongling Wu and Members of the Editorial Board,

We thank the Academic Editor and Reviewers for their careful evaluation and constructive comments, which have substantially strengthened the revised manuscript. We have addressed all four comments raised by Reviewer 3. A point-by-point response is provided below. All revisions are visible in the Revised Manuscript with Track Changes.

RESPONSE TO REVIEWER #2

Comment: The authors addressed all comments satisfactorily and improved the manuscript, particularly regarding the clarity of the writing and the transparency of the presented data.

Response: We thank Reviewer 2 for this positive assessment.

RESPONSE TO REVIEWER #3

We thank Reviewer 3 for the thorough and methodologically rigorous comments. Responses to each point are provided below, with corresponding changes indicated by line numbers in the Revised Manuscript with Track Changes.

Comment 1: The manuscript would be stronger if the authors provided a table summarizing the histopathologic diagnoses, including benign entities, DCIS, invasive carcinoma of no special type, special histologic types if present, and whether malignant cases were invasive or in situ.

Response: We have prepared Supplementary Table S3 (S3 Table), which provides a complete breakdown of all histopathological diagnoses for the 104 lesions, classified per the WHO Classification of Breast Tumours, 4th Edition (2019). Specifically, S3 Table:

1. Lists all benign entities individually (fibroadenoma, fibrocystic change, intraductal papilloma, mastitis/inflammatory lesion, phyllodes tumour, sclerosing adenosis, and epithelial hyperplasia, usual type), per WHO 2019 nomenclature.

2. Clearly distinguishes non-invasive from invasive malignancies: ductal carcinoma in situ (DCIS), NOS (n = 1) is listed separately under “B1. Non-invasive.”

3. Lists all special histological subtypes of invasive carcinoma: invasive carcinoma of no special type (NST; n = 47, including one case with a solid growth pattern), tubular carcinoma (n = 4), and mucinous carcinoma (n = 1), consistent with WHO 2019 nomenclature.

Changes in the revised manuscript:

(1) The following sentence has been added to the Results section, end of the 'Patient and lesion characteristics' paragraph:

"The specific histopathological diagnoses for all lesions, including individual benign entities and a distinction between in situ and invasive malignancies, are provided in S3 Table."

(2) S3 Table has been added to the Supporting Information list at the end of the manuscript. No existing text, data, or tables (Tables 1-4) have been modified.

Comment 2: Similarly, if available, BI-RADS 4 should be subdivided into 4A, 4B, and 4C. Without this, the BI-RADS 4 group is heterogeneous, and the clinical meaning of comparing BI-RADS 4 versus BI-RADS 5 is limited.

Response: The suggestion is fully justified: the ACR BI-RADS Atlas (5th ed., 2013) assigns meaningfully different risks of malignancy to each subcategory (4A: ≥2% to <10%; 4B: ≥10% to ≤50%; 4C: >50% to <95%). However, BI-RADS 4 subcategory data (4A/4B/4C) were not available in the source medical records. The study incorporated data from two military tertiary hospitals in Vietnam collected between January 2021 and September 2023, a period during which structured subcategory reporting was not consistently documented in institutional radiology reports. The binary BI-RADS 4 vs. 5 classification therefore reflects the data as recorded in the original clinical records.

We fully acknowledge that the undifferentiated BI-RADS 4 group introduces heterogeneity into the analysis and limits the clinical interpretability of the BI-RADS 4 vs. 5 comparison. This has been explicitly stated as an additional limitation in the revised Discussion section.

Changes in the revised manuscript:

The following paragraph has been added as the fourth item in the Limitations section of the Discussion (Track Changes):

"Fourth, subcategory data for BI-RADS 4 lesions (4A, 4B, and 4C) were unavailable, as structured subcategory reporting was not consistently documented in the institutional radiology records during the retrospective data collection period (2021-2023). This limits the granularity of the BI-RADS analysis, as the three BI-RADS 4 subcategories carry substantially different risks of malignancy (4A: ≥2% to <10%; 4B: ≥10% to ≤50%; 4C: >50% to <95%). Future prospective studies should incorporate BI-RADS 4 subcategory classification to enable a more refined analysis of imaging-based malignancy predictors within this heterogeneous group."

No data, statistics, or existing conclusions have been modified.

Comment 3: The authors classified Categories IV and V as positive, and Categories II and III as negative for diagnostic performance calculations. This approach may underestimate the clinical uncertainty associated with “atypical” cytology. The authors should justify this decision and ideally provide sensitivity analyses: one excluding Category III cases and another treating Category III as a test-positive or indeterminate result. This would make the reported sensitivity, specificity, PPV, NPV, and accuracy more transparent.

Response: We agree with this assessment and have responded with: (1) a formal justification of the primary classification scheme, incorporated into the Methods section; and (2) two pre-specified sensitivity analyses, presented in S4 Table.

Part 1 - Justification of the primary classification (Cat IV+V = Positive)

The decision to classify Categories IV and V as test-positive and Categories II and III as test-negative was made a priori, following the IAC Yokohama System framework (Field AS et al. Acta Cytol. 2019;63:257-273), in which Category III (Atypical) carries a low risk of malignancy and is recommended for repeat FNA or close follow-up rather than immediate surgical intervention. In our cohort, Category III yielded a ROM of 6.7% (95% CI: 0.2-31.9%), which is statistically comparable to Category II (ROM 7.9%; 95% CI: 1.7-21.4%) and substantially below the thresholds that clinically mandate tissue biopsy.

The following justification has been added to the Statistical Analysis section of the revised Methods (Track Changes, lines 121-126, Revised Manuscript with Track Changes):

"The primary analysis classified Categories IV (Suspicious for Malignancy) and V (Malignant) as test-positive, and Categories II (Benign) and III (Atypical) as test-negative, consistent with the IAC Yokohama System framework, in which Category III carries a low risk of malignancy (ROM = 6.7%; 95% CI: 0.2-31.9%) and is recommended for follow-up or repeat FNA rather than immediate surgical intervention. Two pre-specified sensitivity analyses were performed to assess the robustness of this classification scheme (S4 Table)."

Part 2 - Sensitivity analyses

Two pre-specified analyses were performed on the identical dataset (n = 104; from Table 2 data):

- Sensitivity Analysis 1 (SA1, n = 89): The 15 Category III cases were excluded, retaining only cases with definitive cytological classification.

- Sensitivity Analysis 2 (SA2, n = 104): Category III was reclassified as test-positive (low-threshold scenario).

Results are summarised in the table below and presented in full in S4 Table:

Diagnostic Metric Main Analysis (n=104) Cat IV+V = Pos SA1 (n=89) Cat III excluded SA2 (n=104) Cat III = Pos

Sensitivity 92.5% (82.1-97.9) 94.2% (84.4-98.0) 94.3% (84.6-98.1)

Specificity 96.1% (86.5-99.5) 94.6% (82.3-98.5) 68.6% (55.0-79.7)*

PPV 96.1% (86.5-99.5) 96.1% (86.8-98.9) 75.8% (64.2-84.5)*

NPV 92.5% (82.1-97.9) 92.1% (79.2-97.3) 92.1% (79.2-97.3)

Accuracy 94.2% (88.1-97.8) 94.4% (87.5-97.6) 81.7% (73.2-88.0)*

* Marked reduction in SA2 reflects the clinical cost of treating atypical cytology as an actionable positive result.

Excluding Category III cases (SA1) yields virtually identical performance metrics (sensitivity 94.2%, specificity 94.6%), confirming that the 15 atypical cases did not disproportionately inflate the primary estimates. In contrast, SA2 demonstrates that reclassifying Category III as test-positive substantially reduces specificity (96.1% → 68.6%) and PPV (96.1% → 75.8%) without a meaningful gain in sensitivity (92.5% → 94.3%), further supporting the validity of the primary classification

Changes in the revised manuscript:

(1) Methods - Statistical Analysis: two sentences added to justify the primary classification and pre-specify SA1/SA2, with reference to S4 Table (Track Changes, lines 121-126, Revised Manuscript with Track Changes).

(2) Results - one sentence added after Table 3 (Track Changes, line 172): "Results were consistent across two pre-specified sensitivity analyses; full details are provided in S4 Table."

(3) Supporting Information: S4 Table added. No other data, statistics, or conclusions have been modified.

Comment 4: The multivariate model includes age, tumor size, and BI-RADS classification, but the BI-RADS 5 subgroup is very small: only 11 cases, including 10 malignant and 1 benign lesion. Please pay attention. At minimum, the paper should state that the nonsignificant BI-RADS 5 result should not be interpreted as evidence that BI-RADS 5 lacks clinical value.

Response: We agree that the non-significant result for BI-RADS 5 in the multivariate model must not be interpreted as evidence against its clinical utility. While this caveat was present in the Discussion section of the original manuscript (lines 230-231), it was not sufficiently prominent in the Abstract or Conclusion - the sections most frequently read in isolation. Explicit cautionary statements have been added at both locations.

Changes in the revised manuscript:

(1) Abstract - the following sentence has been added immediately after reporting the BI-RADS 5 p-value (Track Changes):

"However, given the small BI-RADS 5 subgroup (n = 11), this non-significant result should not be interpreted as evidence of its lack of clinical utility, as the analysis was likely underpowered for this specific variable."

(2) Conclusion - the following sentence has been inserted before the final sentence of the Conclusion (Track Changes):

"Of note, the non-significant result for BI-RADS 5 in the multivariate model (p = 0.540; aOR 2.10, 95% CI: 0.20-22.73) should not be interpreted as evidence that BI-RADS 5 classification lacks clinical value; rather, it reflects the limited statistical power of the small BI-RADS 5 subgroup (n = 11), which rendered this estimate susceptible to Type II error."

The Discussion (lines 230-231), which already contained this caveat, has been retained unchanged. No data, statistics, or other conclusions have been modified.

We hope that the revised manuscript and the responses provided above are satisfactory. We remain available should the Editor or Reviewers require any further clarification.

Sincerely,

Assoc. Prof. Dang Thanh Chung, MD, PhD

On behalf of the co-authors

Vice Head, Department of Pathology and Forensic Medicine, Military Hospital 103

Vietnam Military Medical University, Hanoi, Vietnam

dangthanhchung@vmmu.edu.vn

Attachment

Submitted filename: Response_to_Reviewers_auresp_2.doc

pone.0352690.s006.doc (64.5KB, doc)

Decision Letter 2

Dongling Wu

15 Jun 2026

Age and tumor size as independent predictors of malignancy in BI-RADS 4 and 5 breast lesions: A cross-sectional study in Vietnam

PONE-D-25-49862R2

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Additional Editor Comments (optional):

The author has fully addressed the reviewer's comments, and the study reaches publication level.

Reviewers' comments:

Acceptance letter

Dongling Wu

PONE-D-25-49862R2

PLOS One

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Associated Data

    This section collects any data citations, data availability statements, or supplementary materials included in this article.

    Supplementary Materials

    S1 Checklist. STROBE Checklist.

    (DOC)

    pone.0352690.s001.doc (91.5KB, doc)
    S2 Dataset. Anonymized dataset; Age column hidden.

    No personal identifiers present.

    (XLSX)

    pone.0352690.s002.xlsx (17.8KB, xlsx)
    S3 Table. Histopathological diagnoses of 104 breast lesions classified according to the WHO Classification of Breast Tumours (2019).

    (DOCX)

    pone.0352690.s003.docx (28.5KB, docx)
    S4 Table. Sensitivity analyses for diagnostic performance of FNA cytology under alternative Category III classification schemes.

    (DOCX)

    pone.0352690.s004.docx (28.8KB, docx)
    Attachment

    Submitted filename: Response to Reviewers.doc

    pone.0352690.s005.doc (51KB, doc)
    Attachment

    Submitted filename: Response_to_Reviewers_auresp_2.doc

    pone.0352690.s006.doc (64.5KB, doc)

    Data Availability Statement

    The minimal dataset underlying this study’s findings is not publicly available due to ethical restrictions and the protection of patient confidentiality. Researchers who meet the criteria for access to confidential data may request the data from the Institutional Review Board of 103 Military Hospital. All data access requests should be formally submitted to the hospital administration via email at hospital103@benhvien103.vn.


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