Abstract
Proteolysis-targeting chimeras (PROTAC) leverage the ubiquitin–proteasome system to selectively degrade oncogenic proteins, including those previously seen as undruggable. Recent preclinical studies indicate that PROTACs may represent a novel therapeutic strategy in lymphoma and myeloma. Indeed, preclinically, PROTACs have shown high efficacy and remarkable selectivity, a favorable safety profile, and lower toxicity compared with conventional therapies. Their catalytic, reusable mechanism enables drug dosing and offers the perspective of long-term low-dose treatment. PROTACs have demonstrated their ability to overcome drug resistance by targeting and degrading overexpressed or mutant proteins that are responsible for refractory disease. This review aims to offer a comprehensive evaluation of the currently existing PROTACs that have been tested in lymphoma and myeloma to highlight the need for drug optimization and further translational research that could translate PROTACs to clinical trials.
Introduction
Proteolysis-targeting chimeras (PROTAC) are heterobifunctional molecules that induce the degradation of target proteins by harnessing the cellular ubiquitin (Ub)–proteasome system. The structure of PROTACs comprises an E3 ligase ligand and a protein of interest (POI) ligand that are joined by a linker region. After binding to the POI, PROTACs recruit E3 Ub ligase enzymes, forming an E3-PROTAC-POI ternary complex. The recruited E3 Ub ligase then catalyzes the subsequent ubiquitination of the POI, marking it for proteasomal degradation. The Ub–proteasome system represents a protein degradation apparatus involved in maintaining cellular homeostasis by removing damaged proteins (1). The mechanism of ubiquitination involves a series of successive enzymatic processes. First, Ub is activated by the E1 enzyme in an ATP-dependent reaction, which is then transferred to E2, a Ub-conjugating enzyme. In the final step, E3 Ub ligase binds the E2-Ub complex and catalyzes the transfer of the Ub molecule to a target protein (2).
One important advantage of PROTACs is their reusability. Upon degradation of the POI, the PROTAC molecule can rebind to other proteins, leading to more POI degradation, as depicted in Fig. 1. This characteristic also enables PROTACs to be more efficient at low concentrations in comparison with conventional small-molecule inhibitors (SMI). Moreover, another important advantage of PROTACs is their ability to overcome mutation-induced resistance that is specific to SMIs while also requiring a shorter interaction time to induce degradation of the target protein (3–5). Targeted therapies that are currently administered in cancer, such as SMIs and monoclonal antibodies (mAb), often act by targeting proteins exhibiting enzymatic activity. A limitation of mAbs is the restriction to such antigens expressed on the surface of cells. PROTACs can overcome these challenges, as they can target intracellular proteins alike, with and without enzymatic activity, as well as transcription factors or scaffold proteins (3).
Figure 1.
Protein degradation mechanism by Ub–proteasome machinery and PROTACs. 1. Ub binds to E1 with energy consumption. 2. Ub is transferred to E2. 3. E3 binds to the POI (S) and links to E2 in which S is tagged with ubiquitin. 4. Tagged S binds to the proteasome, and degradation is initiated. 5. The protein is degraded, and its fragments can be reused. 1′. Structure of the PROTAC with E3 Ub linker (E3L), linker, and protein of interest linker (POIL). 2′. PROTAC binds the POI (S). 3′. The POI is tagged after PROTAC binds to E3. The PROTAC detaches and can be reused to target other POIs for future degradation. PPi, proton pump inhibitors. [Created in BioRender. Moldovan, R. (2025) https://BioRender.com/fculp5f; ref. 6].
Development of PROTACs
The development of PROTACs was pioneered by Sakamoto and colleagues in 2001. The chimeric molecule induced the degradation of methionine aminopeptidase-2 by recruiting the SCFβ-TRCP E3 Ub ligase (4–7). As these early PROTACs were characterized by low cell permeability, the following studies focused on developing small-molecule PROTACs (5). The same authors introduced the first case of small-molecule PROTACs in 2008, which induced the degradation of the androgen and estrogen receptors. The PROTAC consisted of nutlin to recruit the E3 Ub ligase human homolog of mouse double molecule 2 and the selective androgen receptor modulator, which binds the androgen receptor (4–7). In the same period, another group focused on developing a PROTAC molecule using the cellular inhibitor of apoptosis protein 1 as an E3 ligase and bestatin esters as an E3 ligand, which were able to degrade cellular retinol and retinoic acid binding proteins. The group later named this specific class of PROTACs small and nongenetic inhibitors of apoptosis protein (IAP)–dependent protein erasers (SNIPERs). This was followed by additional IAP ligand development, leading to the production of molecules such as MV1 and LCL161. One disadvantage of SNIPERs is that they induce IAP autoubiquitination and degradation, causing a decrease in IAP E3 ligase levels. Despite representing a limitation, the autoubiquitination of IAP gives the SNIPER molecules a dual-targeting ability, which might come as an advantage in certain cases due to the oncogenic role of IAP (5–8). Of further note, Von Hippel–Lindau (VHL) is another E3 ligase that binds hydroxylated HIF-1α. A series of studies led to the development of a VHL binding compound based on the HIF-1α sequence. The ability of this ligand to bind VHL led to its incorporation in PROTACs, making it one of the most utilized E3 recruiting ligands in this field (8). Immunomodulatory drugs (IMiD) are a class of compounds that can modulate the function of different functions of T and NK cells by inducing the production of cytokines. Notable IMiDs are thalidomide and its analogs, lenalidomide and pomalidomide. Thalidomide targets the CRBN E3 ligase, inducing the ubiquitination and proteasomal degradation of IKZF1 and IKZF2, which are involved in hematologic malignancies such as multiple myeloma. IMiDs are used in a wide range of diseases, including multiple myeloma, myelodysplastic syndrome, mantle cell lymphoma (MCL), and chronic lymphocytic leukemia (9). Therefore, due to its ability to target CRBN, thalidomide and other IMiDs have become widely used in PROTAC development as E3 recruiting ligands. It has been shown that CRBN can have increased neosubstrate degradation compared with VHL, but it could also lead to nonspecific degradation of the neosubstrates (8).
Advantages of PROTACs
One of the important advantages of PROTACs is their ability to induce isoform-selective degradation of the target protein. Although SMIs do not effectively distinguish and selectively target particular isoforms of a protein, resulting in adverse effects, PROTACs that are derived from these same SMIs have demonstrated enhanced selectivity for degradation (1). Moreover, the ability of PROTACs to degrade a substrate is influenced by the ability of that specific protein to form a stable ternary complex with PROTAC and E3 ligase, whereas the binding affinity of the PROTAC for the POI turned out not to be the determining factor. Two PROTAC compounds using foretinib were developed, a c-Met tyrosine kinase inhibitor, as the POI ligand. One of the compounds was able to recruit VHL as the E3 ligase, whereas the other recruited CRBN. The results showed that despite having the same POI ligands, the binding profiles of the two PROTAC molecules were not identical. This also shows that PROTACs can turn ligands with a promiscuous targeting profile into more specific targeting molecules, based on the type of E3 ligase recruited by the PROTAC. Although foretinib alone can bind to more than 50 kinase proteins, the VHL-recruiting PROTAC degraded only 14, and the CRBN-recruiting PROTAC degraded nine (10). Histone deacetylases (HDAC) are a class of enzymes involved in histone deacetylation, modulating the epigenetic background of cells. The enzymes are classified into different classes, each consisting of certain isoforms of HDAC (11). A newly developed PROTAC construct using TMP269 (a class IIa HDAC inhibitor) as a POI ligand was able to specifically target only the HDAC7 isoform, without altering the HDAC9 isoform (12). HDAC7 is involved in regulating cell metabolism and inflammation, and its specific targeting is crucial in pathologic states associated with increased inflammation. In contrast, HDAC9 is involved in cardiac gene expression and vascular calcification, and its nonspecific targeting might lead to unwanted side effects (11, 12). The SWItch/Sucrose Non-Fermentable complexes are involved in transcriptional regulation and DNA repair. The enzymatic function of this complex is granted by the SMARCA2 and SMARCA4 proteins, which possess high sequence homology. As SMARCA4 is frequently mutated in cancer, its specific targeting has gained a lot of attention. It was found that tumors with loss-of-function mutations rely on SMARCA2 for survival, and the additional inhibition of SMARCA2 impairs cell survival through synthetic lethality. A PROTAC construct consisting of a SMARCA2/4 ligand and a VHL recruiting moiety was able to specifically induce the degradation of SMARCA2 at picomolar concentrations, whereas SMARCA4 remained mostly unaffected (13). Additionally, as protein complexes are frequently aberrant in a series of diseases, they have emerged as viable therapeutic targets. SMIs have limitations in targeting multicomponent protein complexes, as inhibition does not lead to a complete loss of function. Therefore, PROTACs can overcome this limitation, having the ability to degrade multicomponent protein complexes (1).
The mechanism of action of PROTACs involves the degradation of the target protein, which functionally culminates in a complete loss of function. This is particularly useful in the case of proteins that harbor both enzymatic and scaffolding functions, as is the case for certain receptor tyrosine kinases (RTK). SMIs that block the enzymatic activity of such multifunctional proteins fall short of inhibiting the specific pathway as, in certain cases, the scaffolding roles of the RTKs can induce pathway reactivation. PROTACs overcome this limitation by completely removing the target protein, eliminating both catalytic and scaffolding functions (1). The ability of PROTAC molecules to eliminate the activity of multifunctional proteins was shown in a series of studies. A PROTAC construct derived from the VS6063 FAK inhibitor was able to completely deplete the FAK protein in ovarian cancer cell lines, leading to the loss of both its kinase-dependent and kinase-independent activity (14). BCR::ABL is a tyrosine kinase with constitutive activity that is derived from the Philadelphia chromosome and is a driving factor in chronic myeloid leukemia (15). Besides its tyrosine kinase activity, this protein has been shown to be involved in kinase-independent roles, such as protein scaffolding (16). The efficiency of PROTACs in eliminating this protein was demonstrated in a study that used a chimeric molecule derived from BCR::ABL inhibitors conjugated to a VHL ligand (17).
Despite having many advantages, the implementation of PROTACs in cancer treatment still faces a series of challenges. One of the most important disadvantages of PROTACs is the hook effect, in which higher concentrations of the compound do not lead to an increased effect. This is caused by the formation of inactive dimers such as E3 ligase:PROTAC or POI:PROTAC, instead of the active E3 ligase:PROTAC:POI trimers (8, 18). Similar to SMIs or mAbs, PROTACs can induce off-target effects, leading to unwanted side effects. The binding of an E3 ligase could influence the binding of its endogenous substrates, leading to the ubiquitination and degradation of undesired neosubstrates. In addition, POIs can also be present in normal tissue, in which their degradation can be detrimental (18). Furthermore, due to their high molecular weight and polar nature, PROTAC molecules can often exhibit decreased membrane permeability and reduced bioavailability (19).
The unique potential of PROTACs to degrade mutant oncoproteins and targets that were considered undruggable positions them as a promising therapeutic strategy distinct from conventional SMIs. This therapeutic potential is particularly relevant in hematologic malignancies such as lymphoma and myeloma, in which dysregulation of protein homeostasis and resistance to standard therapies remain critical clinical challenges. PROTAC molecules can often exhibit decreased membrane permeability and reduced bioavailability. In parallel, cellular immunotherapy strategies are also being developed to target the undruggable intracellular space. For example, Cheng and colleagues (20) engineered costimulatory signal-armed alpha (α) chain and a beta (β) chain of T cell receptor (abTCR) T cells to target the Epstein Barr Virus (EBV) latency antigen LMP2, highlighting how both PROTAC degraders and engineered T cells are converging on the challenge of intracellular oncogenic drivers. Recent advances have demonstrated that PROTACs can selectively target and degrade key oncogenic drivers involved in the pathogenesis and progression of these malignancies, including proteins involved in resistance to therapy, apoptosis, or cell-cycle regulation. Below, we aim to present that several PROTACs show high potential as therapeutic agents in lymphoma and myeloma, debating the outcomes and perspectives.
Translational Limitations and Challenges in PROTACs Technology
PROTACs have opened new chapters for the development of novel drugs, offering unprecedented opportunities in medicine to overcome drug resistance, degrade targets considered undruggable, and bring hope for better management of oncologic patients. However, as a new technology, the use of PROTACs faces many challenges and has limitations that need to be addressed. The main translational limitations include bioavailability issues, tumor selectivity and off-target toxicity, delivery challenges, resistance to therapy, substrate degradation and selectivity, and compound stability (21, 22). Usually, PROTACs are large, heterobifunctional molecules with low oral bioavailability and poor membrane permeability, features that limit their systemic exposure and tumor penetration, particularly in bone marrow and lymphatic tissues (23, 24).
Off-target toxicity is a constant risk in PROTAC approaches, as they recruit ubiquitously expressed E3 ligases such as CRBN or VHL, with the risk of degrading target proteins in normal cells. The lack of tumor-specific E3 ligases remains a major barrier to selective degradation in malignant cells. Besides the off-target toxicity, the delivery challenges are critical, as efficient intracellular delivery is hampered by their high molecular weight and hydrophobicity. Thus, the use of nanomedicine and cell-penetrating peptides could improve drug delivery in future studies (24, 25).
PROTAC efficacy can be compromised when tumor cells develop resistance through downregulation or mutation of E3 ligases, altered expression of target proteins, or changes in the Ub–proteasome system. IMiD-based PROTACs can induce degradation of neosubstrates that have critical roles in normal cellular functions, embryonic development, disease progression, or other cellular processes, leading to adverse effects; thus, achieving selective neosubstrate targeting remains a significant challenge (26, 27).
All these challenges are responsible for the translational limitations of the current PROTACs. Furthermore, in the case of myeloma and lymphoma, PROTACs have been reported to induce hematologic toxicities like neutropenia, lymphopenia, and thrombocytopenia; off-target protein degradation; and gastrointestinal symptoms such as diarrhea and nausea. These effects occurr due to the mechanism of action, which involves the Ub–proteasome system and the use of E3 ligase recruiters, such as CRBN, which are effective against oncogenic targets but also affect normal cells (26–28).
The pharmacokinetic and bioavailability issues related to PROTACs in myeloma and lymphoma include low oral bioavailability, poor aqueous solubility, limited cell membrane permeability, and rapid clearance from the body. Typically, these therapeutic agents are complicated, large, heterobifunctional molecules that have high molecular weight and complicated structures, which limit passive diffusion through cell membranes and decrease absorption after oral administration. Thus, most of the agents require parenteral delivery, and even in these systems, the distribution to bone marrow and lymphatic tissues is poor. Furthermore, these therapeutics usually show poor metabolic stability and undergo rapid degradation and clearance from the blood, which decreases the therapeutic window, requiring frequent dosing or special delivery systems to be employed. One such complication associated with dosing strategies is the “hook effect,” which is a concentration-dependent phenomenon in which high levels of PROTAC, paradoxically, decrease target degradation. Novel approaches in formulation, such as lipid-based nanoparticles and polymeric micelles, are being investigated to improve bioavailability, tumor targeting, and systemic exposure (29–31).
Another critical barrier is the tumor microenvironment (TME). In multiple myeloma, the bone marrow microenvironment is characterized by high cellular density, a robust extracellular matrix, and altered vasculature, all of which inhibit the transport and distribution of drugs to malignant plasma cells. Moreover, both stromal cells and immune cells produce soluble factors, including cytokines and chemokines, which generate physical and biochemical barriers that limit access to PROTACs at their intracellular sites of action. Hypoxia, as well as altered metabolic pathways within TMEs, may also lead to decreased cellular uptake and altered drug metabolism, thus decreasing the efficacy of PROTACs. In addition, cell adhesion-mediated drug resistance, due to myeloma cell–stromal cell and microenvironment-to-myeloid cell interactions, limits the intracellular delivery of drugs and promotes survival signals, reducing the efficacy of this therapy. In lymphoma, relatively similar interstitial pressure, a network of stromal cells, and immune-suppressive niches are present in lymphoid tissues, which limit the diffusion and cellular uptake of PROTACs. In addition, the high molecular weight and low permeability of most PROTACs reduce their efficacy, and an increased focus on developing novel delivery systems, including nanoparticles and membrane carriers to mimic tumor biology or enzyme-activated prodrugs, is essential to improve the tumor localization and penetration of these molecules (31–33).
Molecular stability is a significant issue as PROTACs are subject to rapid metabolic degradation and hydrolysis owing to their large size, flexible nature, and heterobifunctional properties. Rapid degradation and low drug concentrations will limit the effectiveness of the therapy. Chemical modifications of linker stabilities, as well as improving the metabolic stability of E3 ligase ligands, could offer a better perspective in terms of drug availability and efficacy. The presence of a dense extracellular matrix, abnormal vasculature, and excessive interstitial tissue pressure in the marrow and lymphoid tissues presents further challenges to effective translation by slowing down the penetration and distribution of PROTACs. In an effort to overcome these limitations, nanotechnology-based delivery vehicles, such as lipid nanoparticles, polymeric micelles, or stimuli-responsive carriers, are being developed to protect PROTACs from premature metabolic degradation, promote tumor-specific codelivery, and allow for the controlled release of the PROTAC in the presence of environmental stimuli such as pH and enzymes (29, 31, 34).
PROTACs can synergistically enhance the efficacy of bispecific antibodies or chimeric antigen receptor (CAR) T-cell therapy; they can increase the abundance of tumor antigen–derived peptides presented to MHC class I molecules. Thus, T-cell activation can be improved, cytokine secretion can be enhanced, and tumor killing can be more effective (35). PROTAC mechanisms of action can enhance immunotherapy in various types of cancer, enhancing immune response and inhibiting immune suppression (36). Other therapies are facing difficulties in implementation due to biological barriers, and one notable example is the engineered costimulatory signal-armed abTCR T cells designed to target the EBV latency antigen LMP2, which underwent multiple testing and molecular adjustments to obtain augmented T-cell proliferation and antitumor efficacy (20).
For a better clinical translation, PROTAC design should consider structures that can offer stability, high efficacy, better delivery rates, and low off-target toxicities.
Lymphoma
Lymphomas represent a heterogeneous group of malignancies of lymphoid origin that are characterized by complex and varied genetic landscapes, different cells of origin, and treatments. Depending on their origin, lymphoid neoplasms are divided into lymphomas originating in precursor lymphoid cells and lymphomas originating in mature lymphoid cells. Mature lymphoid neoplasms are subclassified depending on T- or B-cell origin. Additionally, mature lymphomas are categorized as non-Hodgkin lymphomas (NHL) and Hodgkin lymphomas (37).
Mature lymphomas of T-cell origin are referred to as peripheral T-cell lymphomas and represent 10% to 15% of NHL. Anaplastic large-cell lymphoma (ALCL) is a mature T-cell neoplasm originating in T cells expressing the CD30 lymphocyte activation marker. ALK-positive ALCL is a lymphoma subset presenting chromosomal rearrangements of the ALK gene, with most cases carrying the t(2;5) (p23;q25) translocation and expressing nucleophosmin-ALK fusion proteins. This leads to the constitutive activation of ALK that sends downstream signals related to survival and cell growth. Other chromosomal aberrations found in ALCL include TP63 and DUSP22 rearrangements. T-cell lymphomas of T follicular helper (TFH) origin are characterized by the expression of TFH markers such as CD10, CD279, CXCL13, B-cell lymphoma 6 (BCL6), CD40L, and NFATC1. Other common genetic alterations present in T-cell lymphomas of TFH origin include somatic mutations in TET2, THOA, IDH2, CD28, DNMT3A, and fusions of ITK-SYK or CD28-CTLA4 (37). Yet other cases of T-cell lymphoma fall into the category of peripheral T-cell lymphoma, not otherwise specified, or PTCL-NOS. Although this category shows a high level of heterogeneity between phenotypes, different studies have identified that PTCL-NOS is associated with genetic alterations like GATA3 and TBX21 overexpression or mutations of certain genes such as epigenetic mediators [KMT2D (MLL2), TET2, KDM6A, ARID1B, DNMT3A, CREBBP, MLL, and ARID2], tumor suppressor genes (TP53, FOXO1, BCORL1, and ATM), or genes involved in signaling pathways (TNFAIP3, APC, CHD8, ZAP70, NF1, TNFRSF14, and TRAF3). Cytotoxic T-cell and NK cell lymphomas and leukemias are another group of diseases characterized by heterogeneous prognosis and clinical behavior. Most of these neoplastic diseases present extranodal disease, involving the liver, spleen, and bone marrow. Studies have found that many T-cell and NK cell malignancies are characterized by mutations in the JAK/signal transducer and activator of transcription (STAT) pathway, more specifically in the STAT3 and STAT5B genes (38).
Lymphomas deriving from B cells account for 85% to 90% of non-Hodgkin neoplasms, their main origin being in the germinal centers. Physiologic processes such as somatic hypermutation and class switch recombination that are present during the germinal center reaction can support lymphomagenesis due to their proneness to errors that can cause DNA damage. Aside from these cases, there are neoplasms derived from post-germinal center cells, including marginal zone lymphoma (MZL) and lymphomas derived from B cells that have not entered the germinal center, such as MCL (39). Burkitt lymphoma is an aggressive subtype of germinal center B-cell lymphoma, expressing CD45, CD20, CD79a, CD10, and BCL6, while being BCL2-negative. The cells are highly proliferative, having an almost ubiquitous Ki-67 expression index. This disease is associated with genetic alterations spanning mutations in TCF3, ID3, CCND3, TP53, or CDKN2A. Moreover, MYC has a constitutive activity caused by the t(8;14) chromosomal translocation (38, 39). Diffuse large B-cell lymphoma (DLBCL) is the most common subtype of non-Hodgkin B-cell lymphoma, representing up to 40% of cases. Typical genetic alterations found in this B-cell neoplasm are rearrangements in the MYC, BCL2, and BCL6 genes. DLBCL is associated with mutations in several genes, such as MYD88, CD79B, NOTCH1/2, EZH2, PI3K, CREBBP, TP53, CDKN2A, JAK/STAT, and BRAF/MEK1. MCL represents 5% to 7% of non-Hodgkin B-cell neoplasms. It is characterized by an unmutated IGHV due to the absence of germinal center reaction and an overexpression of SOX11. MCL is associated with cell-cycle dysregulation at the G1–S-phase due to cyclin D1 overexpression caused by the t(11;14)(q13;q32) chromosomal translocation. In addition, MCL has recurrent somatic mutations in a number of genes such as ATM, TP53, CDKN2A, NSD2, KMT2D, MEF2B, KMT2C, SMARCA4, CCND1, BIRC3, TRAF2, and NOTCH1/2 (39). MZL is derived from post-germinal center B cells and accounts for 5% to 15% of all NHLs of B-cell origin (39). MZL is divided into three subtypes, which differ in clinical representation and behavior: splenic MZL, extranodal MZL, and primary nodal MZL (NMZL). Splenic MZL cells possess a nonspecific phenotype, usually lacking the expression of annexin A1, CD5, CD10, CD23, CD25, CD43, cyclin D1, LEF1, and CD103. The most common chromosomal abnormality, found in approximately a third of the cases, is the deletion of the 7q chromosome. Extranodal MZL presents a phenotype that is negative for CD5, CD10, CD23, LEF1, cyclin D1, and SOX11, with some rare cases that are CD5- or CD10-positive. Frequent chromosomal aberrations are represented by the BIRC::MALT1, IGH::MALT1, and FOXP1::IGH translocations, whereas mutations with the highest incidence occur in NOTCH1, TNFAIP3, TBL1XR1, KMT2D, TET2, TNFRSF14, PICK3CD, NF1, TRAF3, and SPEN, depending on the subtype of extranodal MZL (40). NMZL cells have a phenotype similar to extranodal MZL cells. The cells are positive for CD19, CD20, CD79a, Oct2, Pax5, BCL2, and CD43 and negative for CD5, CD10, CD23, and cyclin D1. In terms of cytogenetics, NMZL cells have a nonspecific profile that includes chromosomal abnormalities found in other types of MZL, such as trisomy 3, trisomy 18, trisomy 7, and trisomy 8. Molecular features specific to NMZL are represented by the absence of the 7q losses (splenic MZL), the inactivation of the A20 gene, and specific expression patterns of MNDA, CHIT1, TAC1, TGFβ, miR-221, and miR-223 (41).
Hodgkin lymphoma accounts for approximately 10% of lymphoma cases, and it is characterized by the presence of pathognomonic multinucleate giant cells or large mononuclear cells called Hodgkin or Reed–Sternberg (HRS) cells, surrounded by lymphocytes, eosinophils, neutrophils, histiocytes, and plasma cells, to form an inflammatory milieu (42). Hodgkin lymphoma is divided into two subtypes: classical Hodgkin lymphoma (CHL), accounting for 85% of all Hodgkin cases, and nodular lymphocyte predominant (LP) Hodgkin lymphoma (NLPHL). CHL HRS cells usually possess a repressed B-cell program and have defective immunoglobulin expression. CHL is characterized by the expression of CD30 and CD15 in most cases, with a more frequent expression of CD30. Frequent chromosomal alterations found in CHL HRS cells include chromosome material gains in 2p, 9p, 17q, 19q, and 20q and losses in 6q and 13q. These chromosomal alterations lead to differential expression patterns of several genes involved in signaling pathways, such as JAK2, PDL1, PDL2, REL, RELB, CD40, and MAP3K14. A clinically important modification is the amplification of PDL1/PDL2 caused by gains in 9p24.1 and by amplification of JAK2. Genetic analyses found recurrent mutations in JAK-STAT pathway genes: STAT6, GNA13, XPO1, and ITPKB (43). The characteristic cells of NLPHL are the LP cells. These cells possess a phenotype that indicates a germinal center B-cell origin, due to the expression of B-cell markers such as CD19, CD20, and CD79 and germinal center B cell–associated molecules including BCL6, HGAL, and AICD. The number of known genetic alterations present in LP cells is lower than that found in HRS cells. The most common mutations are found in BCL6, SOCS1, SGK1, JUNB, DUSP2, and REL (44).
PROTACs in lymphoma
PROTACs are heterobifunctional small molecules that are designed to induce selective degradation of specific proteins, harnessing the Ub–proteasome system. PROTACs are not part of the standard of care in lymphoma, as ongoing studies evaluate their potential efficacy and toxicity and optimize tumor selectivity. In the context of lymphoma, several PROTACs are being developed and tested, targeting BCL-xL, STAT3/JAK, Bruton’s tyrosine kinase (BTK), BET, IRAK4, IL2-inducible kinase (ITK), HDAC7, Bax inhibitor-1 (BI-1), BCL6, maternal embryonic leucine zipper kinase (MELK), Polycomb repressive complex 2 (PRC2), and ALK, summarized in Fig. 2.
Figure 2.
Downstream effect of PROTACs in lymphoma. PROTACs specific to BCL-xL, STAT3/JAK, BTK, BET, IRAK4, ITK, HDAC7, BI-1, BCL6, MELK, PRC2, and ALK. Different PROTACs designed for targeting specific proteins in lymphoma, aiming to reduce proliferation, induce cell-cycle arrest, reduce resistance to therapy, and induce programmed cell death. PROTACs could modulate gene expression and histone acetylation for favorable outcomes and antitumor effects. The cumulative effect of PROTACs leads to target degradation via the Ub–proteasome machinery with high specificity and low off-target effects. ODN, oligodeoxynucleotides. [Created in BioRender. Moldovan, R. (2025) https://BioRender.com/ywwcwu3].
PROTACs targeting BCL-xL
BCL-xL is an antiapoptotic protein that is part of the BCL2 family of proteins. The role of the BCL2 family of proteins is to regulate apoptosis through competitive fluxes of anti- and proapoptotic proteins. BCL-xL possesses two distinct mechanisms of regulating apoptosis. First, it can bind the BH3 domain of proapoptotic regulators, leading to an inhibition of apoptosis. Additionally, it can bind cytosolic p53, blocking the activation of BAX/BAK and leading to an inhibition of apoptosis (45). It was shown that BCL-xL is frequently overexpressed in Hodgkin lymphomas and in more than 80% of NHL cases, as well as in multiple myeloma, making it an important target (46).
DT2216 is a BCL-xL–targeting PROTAC. The construct was based on navitoclax, a BCL2/BCL-xL inhibitor, targeting and inducing the degradation of BCL-xL by recruiting the VHL E3 ligase. DT2216 was able to kill T-cell lymphoma cell lines by selectively degrading BCL-xL in a dose- and time-dependent manner. These findings revealed that the PROTAC construct is more potent against lymphoma cell lines and has reduced toxicity compared with navitoclax (47). Similar findings were reported with an IAP E3 ligase recruiting a PROTAC targeting BCL-xL. The compound was able to potently degrade BCL-xL in a T-cell lymphoma cell line while also exhibiting improved efficiency and lower toxicity compared with the parent compound, navitoclax (ABT-263; ref. 48). The efficiency of BCL-xL targeting PROTACs was reported in other studies using different experimental models, including acute myeloid leukemia (AML) cell lines and colon cancer cell lines (49, 50).
PROTACs targeting JAK/STAT
The JAK/STAT signaling pathway is one of the most important pathways involved in cell function, encompassing numerous signaling molecules such as growth factors and cytokines (51). The JAK/STAT pathway has a variety of roles in immune function, hematopoiesis, inflammation, and apoptosis (52). JAK represents a family of non-RTKs, having a total of four members: JAK1, JAK2, JAK3, and TYK2. They are associated with cytokine or growth factor receptors via specific motifs, and upon the binding of the signal molecule and receptor activation, JAK proteins phosphorylate specific tyrosine residues on the intracellular side of the receptor, which then act as binding sites for the STAT proteins (52). The STAT protein family represents a group of transcription factors sharing a similar structure. The members of the STAT family are STAT1, STAT2, STAT3, STAT4, STAT5a, STAT5b, and STAT6. After STAT phosphorylation by JAK kinases, they dimerize and translocate to the nucleus in which they induce the transcription of various genes. STAT3 is involved in cell survival, proliferation, differentiation, and angiogenesis. In normal cells, its activity is tightly regulated by different suppressors and protein phosphatases. In contrast, STAT3 can become hyperactivated in cancers, leading to tumor formation, metastasis, and drug resistance (53). The role of the JAK/STAT pathway in hematologic malignancies, including lymphoma, was shown by a series of studies. The JAK/STAT pathway has increased activity in T-cell lymphoma, with frequent mutations in JAK1, JAK2, JAK3, STAT3, and STAT5b (54). The JAK/STAT pathway was found to regulate the expression of CD38 on myeloma cells in the bone marrow microenvironment (55). JAK inhibitors are classified into reversible and irreversible inhibitors. Reversible inhibitors bind to JAK via hydrogen bonds and hydrophobic interactions. This category includes ATP-competitive inhibitors such as filgotinib and fedratinib, which are type I inhibitors, and NVP-BBT594 and NVP-CHZ868, which are type II. Type I inhibitors to bind the active conformation of JAK, whereas type II inhibitors bind to the inactive conformation. These molecules bind to the ATP binding site of JAK proteins, blocking the binding of ATP. Another category of JAK reversible inhibitors are allosteric inhibitors, which bind to different sites than the ATP binding pocket. Examples include deucravacitinib and LS104. Irreversible JAK inhibitors, represented by ritlecitinib, form a covalent bond to the C909 residue in JAK3 (56). With respect to JAK inhibitor resistance, it was found that cells harboring JAK2 mutations p.Y931C, p.L983F, or p.G993A become resistant to multiple type I JAK inhibitors (57). Numerous STAT inhibitors have been developed for cancer treatment with various structures and mechanisms of action. Stattic was the first SMI of STAT3 to be discovered. It blocked STAT3 dimerization and could bind to STAT3 with high selectivity in comparison with other STAT molecules. Decoy oligonucleotides are a form of nucleotide-based inhibitor of STAT. They consist of transfecting synthetically derived cis-elements into cells. These sequences bind to the DNA binding domain of STAT, preventing its interaction with the DNA response element and reducing STAT-induced gene expression. An extensive list of STAT inhibitors can be found elsewhere (58).
SD-36 is a PROTAC molecule specifically targeting STAT3. This construct potently induced the degradation of STAT3 in human leukemia and lymphoma cell lines, as well as in murine ones. Additionally, transcriptome analyses revealed that SD-36 treatment induced downregulation of STAT3 target genes such as BCL3, HCK, HGF, JAK3, PIM1, SOCS3, and VEGFA. It was also demonstrated that the compound exhibited a high specificity for STAT3, demonstrating more than 100-fold selectivity for the degradation of STAT3 over other STAT proteins. Besides its in vitro efficiency, SD-36 was able to deplete STAT3 levels in vivo, leading to long-lasting tumor regression in murine models while also exhibiting low toxicity (59, 60). Another study focused on developing a STAT3-degrading PROTAC by conjugating decoy oligodeoxynucleotides with thalidomide, a CRBN E3 ligase ligand, highlighting the induced STAT3 degradation in B-cell lymphoma cell lines while also inhibiting the growth of human B-cell xenotransplants in mice (61). In another study, it was found that a JAK-targeting PROTAC using phenyl glutarimide as a CRBN-recruiting ligand managed to efficiently reduce the levels of JAK2 and JAK3 in B-cell lymphoma cell lines, displaying cytotoxic effects. Moreover, it was found that the compound had a high selective degradation of JAK2 and JAK3, minimizing the degradation of GSPT1, a common off-target neosubstrate of IMiD-based PROTACs (62).
PROTACs targeting BTK
BTK is a protein from the Tec family of kinases, primarily found in B cells. The protein can be activated by a series of surface receptors such as B-cell, Toll-like, chemokine, and Fc receptors (63). Upon activation, BTK binds to PIP3 and is then phosphorylated by SYK. BTK then undergoes autophosphorylation in the SH3 domain, leading to the release of secondary messengers like IP3 and DAG, which induce the activation of NFAT and NF-κB transcription factors. Moreover, BTK activation can lead to the activation of the Akt pathway. Therefore, BTK is involved in processes such as B-cell development, differentiation, activation, maturation, and migration (64). Due to its crucial role in B-cell development, BTK is involved in many B-cell malignancies, including chronic lymphocytic leukemia, MCL, and MZL, which has led to the development of BTK inhibitors for the management of these diseases (65). BTK inhibitors can be further classified as covalent or noncovalent. Covalent inhibitors irreversibly bind with the C481 residue in the ATP binding pocket of BTK. Important examples are ibrutinib, acalabrutinib, zanubrutinib, and tirabrutinib. Ibrutinib was the first BTK inhibitor approved by the FDA for the treatment of lymphomas such as MCL, MZL, and Waldenstrom's macroglobulinemia. The efficacy of ibrutinib against DLBCL was shown in clinical studies. When added to standard R-CHOP treatment, ibrutinib improved patient outcomes and overall survival rates; however, it led to serious side effects in more than 50% of patients. Noncovalent BTK inhibitors function without binding to C481, which implies potential for activity blockade of both wild-type (WT) and mutated forms of BTK. Important examples are pirtobrutinib, nemtabrutinib, and vecabrutinib (66). The most common mutation accounting for ibrutinib resistance is C481S (substitution of a cytosine with serine at position 481), which blocks the binding of ibrutinib and other second-generation BTK inhibitors while maintaining BTK function (65). Moreover, mutations outside of BTK have been found to be responsible for acquired BTK resistance. The S707Y, R665W, and L845F mutations in PLCγ2 could allow B-cell receptor–mediated activation that is independent of BTK (67).
A BTK-targeting PROTAC, created by conjugating ibrutinib and pomalidomide, a CRBN ligand, was previously developed. The construct could potently degrade BTK in a human diffuse B-cell lymphoma cell line, culminating in cytotoxicity. This chimeric molecule could overcome ibrutinib resistance due to its ability to degrade the C481S mutant BTK. It further had increased selectivity for BTK, with almost no effect on ITK, EGFR, or other Tec family kinases, which are known off-targets of ibrutinib (68). The ability of a BTK-binding PROTAC to effectively overcome drug resistance in BTK mutant lymphoma could subsequently be demonstrated. Here, UBX-382 could strongly degrade WT BTK in various B-cell lymphoma cell lines, as well as mutated versions such as E41K, T474I, C481S, C481R, C481T, C481Y, C481F, and L528W in vitro and in vivo. UBX-382 had a more potent effect than ibrutinib and ARQ-531, presenting high cytotoxicity in lymphoma cell lines and leading to complete tumor regression in vivo. Additionally, UBX-382 inhibited SYK, MEK, and ERK and decreased the production of CCL3 and CCL4 (69, 70). A CRBN-recruiting reversible covalent PROTAC used poseltinib as the targeting ligand. Besides being a potent BTK degrader, the molecule also managed to target and degrade IZKF1/3, leading to decreased cell growth in different B-cell lymphoma cell lines (71). Therefore, BTK-degrading PROTACs seem to be a highly efficient way of managing BTK-driven hematologic malignancies, especially due to their ability to overcome acquired BTK inhibitor resistance, as shown in other similar studies (72, 73).
PROTACs targeting BET
The bromodomains are amino acid sequences that recognize and bind acetylated lysine residues in a series of proteins such as histones. Proteins from the BET family can also interact with transcription factors and transcription elongation complexes in a lysine acetylation–dependent or lysine acetylation–independent manner (73). The BET family consists of four distinct subtypes: bromodomain-containing protein 2 (BRD2), BRD3, BRD4, and BRDT, a testis-specific form. The roles of BETs are multiple. First, proteins containing BET domains act as epigenetic regulators, being found in helicases, transcriptional coactivators, methyltransferases, and nuclear scaffolding proteins. In addition, BRD4 has been found to regulate the expression of the MYC proto-oncogene. Common signaling pathways associated with BETs are the NF-κB, PI3K/AKT, and JAK/STAT pathways (74). MYC has been found to be associated with different types of lymphomas, being involved in lymphomagenesis. MYC plays an important role in hematologic malignancies such as large B-cell lymphoma or DLBCL and is involved in the pathogenesis of multiple myeloma (75, 76). Additionally, epigenetic dysregulations have been found to play an important role in T-cell as well as B-cell lymphomas (77, 78). Therefore, the influence of BET proteins on MYC and epigenetic regulators, as well as different signaling pathways, has led to the development of a series of BET inhibitors for cancer management. JQ1 is an inhibitor of BET proteins, its main target being BRD4. JQ1 acts by competitively binding to the acetyllysine-binding bromodomains of BRD4, inhibiting further protein–protein interactions (79). JQ1 is a potent BET inhibitor, and its efficacy against lymphoma has been shown in a series of studies. JQ1 treatment led to senescence and apoptosis in cutaneous T-cell lymphoma cell lines, as well as a downregulation of c-Myc, CD30, and CCR4 expression (80). Moreover, JQ1 was able to induce p53-independent apoptosis in an aggressive BCL cell line by upregulating proapoptotic proteins and downregulating antiapoptotic BCL2 family members (81). OTX015 is another BET inhibitor with better oral bioavailability than JQ1. The compound can inhibit BRD2, BRD3, and BRD4 and exhibit good antitumoral activity in B-cell lymphoma. Multiple ways of achieving BET inhibitor resistance have been reported. In AML, the response to BET inhibitor therapy was found to be reduced by compensatory MYC upregulation via the WNT pathway. In colorectal cancer, IL6/8–Janus kinase 2 signaling promotes BRD4 phosphorylation, decreasing the binding affinity of BET inhibitors (82).
ARV-825 is a CRBN-recruiting PROTAC that uses OTX015 as the targeting ligand. ARV-825 treatment led to almost complete BRD4 depletion and increased c-Myc suppression compared with cells treated with JQ1 or OTX015. ARV-825 further induced a more pronounced inhibition of proliferation and apoptosis in different B-cell lymphoma cell lines compared with regular BET inhibitors such as JQ1 and OTX015 (83). Similar results were obtained elsewhere (84). BRD4-targeting PROTACs, ARV-771 and ARV-825, were also tested in the context of MCL. These PROTAC constructs could efficiently deplete BRD4 and BRD2 levels and induce apoptosis in different MCL cell lines in vitro while also improving the median overall survival of NSG mice with MCL xenografts. Moreover, ARV-771 and ARV-825 were more efficient at depleting BRD4 than conventional BETi like JQ1 or OTX015, which induced incomplete inhibition and led to the accumulation of BRD4. The BET-PROTAC treatment also downregulated the expression of certain genes, including MYC, BCL-xL, PRDM1, BCL2, and BTK, whereas NOXA, CDKN1A, and TNFAIP3 were upregulated (85). In another study, the efficiency of ARV-771 was probed in a PDX model of Richter-transformed (RT) DLBCL. ARV-771 treatment led to the depletion of BRD4 and BRD2 and reduced cell viability. Cotreatment of ARV-771 and the BCL-xL inhibitor, venetoclax, acted synergistically, leading to increased lethality in RT-DLBCL cells. Combined treatment had beneficial effects in vivo as well, leading to prolonged survival and tumor reduction in NSG mice engrafted with DLBCL cells (86). MZ1 is another BET PROTAC that uses JQ1 as the targeting warhead and recruits VHL as the E3 Ub ligase. The molecule was found to be more effective at inhibiting MYC and BRD4 than the BET inhibitor birabresib, leading to increased cytotoxic effects in a series of DLBCL cell lines. Besides its in vitro effects, MZ1 exhibited in vivo efficacy as well, inhibiting tumor growth in mice (87).
PROTACs targeting IRAK4
IRAK4 is a member of the IL1 receptor–associated kinases (IRAK) protein family, which is involved in the signal transduction of Toll-IL1 receptor (TIR) family members. TIRs are involved in immunity, having a large series of functions such as pathogen or proinflammatory cytokine recognition and the transition between innate and adaptive immunity. IRAK proteins are recruited by TIRs via MyD88, leading to their activation and rapid phosphorylation. IRAK then leaves the receptor complex and interacts with TRAF6. The IRAK/TRAF6 complex is involved in the formation of the signalosome complex, which activates different downstream signaling pathways such as IKKs, p38, and JNKs, activating NF-κB and AP-1 transcription factors (88). MyD88-IRAK tonic signaling caused by MYD88 activating mutations is found in many cases of lymphomas, including Waldenström macroglobulinemia and DLBCL, as well as other B-cell malignancies. The implications of IRAK1/4 in lymphoma pathogenesis led to the development of a series of inhibitors that target these kinases at clinical and preclinical levels. In a clinical study in patients with NHL, CA-4948 had a favorable safety profile and reduced tumor burden in 20% of patients. In another study, the same compound reduced bone marrow blasts in 10 of 12 patients. Other IRAK4 degraders studied in the context of lymphoma are BAY1830839 and KT-474 (89).
An IRAK4 degrader induced a potent reduction of IRAK4 and an inhibition of p-IRAK4, p-IKKα/β, and p-NF-κB in a DLBCL cell line, compared with a regular IRAK4 inhibitor. Moreover, the compound could reduce the proliferation of the lymphoma cell line compared with the IRAK4 inhibitor. The IRAK4 degrader removed the kinase and scaffolding functions of the protein, leading to a complete inhibition of NF-κB signaling, halting the proliferation of cells (90). On the other hand, an IRAK4 PROTAC did not lead to increased apoptosis or inhibition of proliferation compared with IRAK4 inhibition, suggesting that IRAK4 has a redundant role in DLBCL survival (91).
PROTACs targeting ITK
ITK is a protein involved in T-cell receptor signaling. Upon TCR activation, ITK is recruited to the TCR in which it interacts with LAT and SLP76, which then activates PLCγ1, leading to increases in intracellular calcium levels and activation of ERK, JNK, NFAT, and AP-1. ITK also forms a complex with LAT, SLP76, Vav, Rac, and Cdc-42, which induces actin polymerization and cell migration (92, 93). ITK has been associated with T-cell lymphoma, especially through a translocation that leads to the formation of the ITK-SYK fusion protein (94).
BSJ-05-037 is an ITK PROTAC, which could effectively target and degrade ITK in T-cell lymphoma cell lines. In addition, the PROTAC led to a dose-dependent inhibition of PLCγ1 and abrogated the TCR-dependent upregulation of GATA3, which induces chemotherapy resistance. Therefore, the administration of BSJ-05-037 could alleviate chemotherapy resistance in vitro, with similar effects observed in vivo as well (95). Several ITK inhibitors have been developed in recent years, which were extensively reviewed elsewhere (96, 97).
PROTACs targeting HDAC7
HDAC7 is an HDAC enzyme from the HDAC family. It can deacetylate histones or nonhistones and regulates a series of functions through its deacetylating activity, such as immunity, angiogenesis, embryonic development, and energy metabolism. HDAC7 also regulates signaling pathways, causing the deacetylation of STAT3 and β-catenin. Upon deacetylation by HDAC7, the phosphorylation of β-catenin is inhibited, and it accumulates in the nucleus, in which it binds to TCF/LEF, inducing the expression of certain genes. HDAC7 can induce PI3K/AKT activation by upregulating PI3K and AKT and downregulating PTEN. HDAC7 further plays a role in inhibiting the JAK/STAT pathway. HDAC7 inhibits the phosphorylation of STAT3 by deacetylation and downregulates the expression of JAK1 (98). HDAC7 is involved in the pathology of different types of lymphomas, with its overexpression being associated with DLBCL (99). Examples of HDAC inhibitors approved by the FDA for the treatment of lymphoma are vorinostat and romidepsin. Despite their efficacy in hematologic malignancies, these inhibitors lack antitumoral activity in solid tumors and have been associated with cardiotoxicity (100).
HDAC7-degrading PROTAC based on the HDAC class IIa inhibitor TMP269 recruited CRBN as the E3 ligase, named B14. This compound induced HDAC7 degradation in a time- and concentration-dependent manner in DLBCL and AML cell lines. The compound exhibited increased selectivity for class IIa HDACs, having minimal impact on class I HDACs like HDAC1, HDAC2, or HDAC3 and on class IIb HDACs like HDAC6 and HDAC10. It also had limited influence on the degradation of neosubstrates such as SALL4, IKZF1/3, and GSPT1. Treatment with compound B14 reduced proliferation and induced apoptosis in both DLBCL and AML cell lines by upregulating the proapoptotic cleaved PARP and cleaved Cas3. In addition, the compound induced cell-cycle arrest in the G0-phase more efficiently than TMP269. B14 exhibited antitumoral effects in vivo as well, being able to degrade HDAC7 and reduce tumor growth in mice with xenografted DLBCL cells (101).
PROTACs targeting BI-1
BI-1 is a protein that suppresses apoptosis by inhibiting the translocation of proapoptotic Bax to the mitochondria. BI-1 is highly conserved among plants and animals, and it is mainly localized to the endoplasmic reticulum (ER) membranes. It was found that BI-1 inhibits apoptosis signaling linked to ER stress by blocking calcium release from the ER. Overexpression thereof protects cells from apoptosis induced by a series of ER stress agents. Additionally, BI-1 interferes with cell death signaling between the ER and mitochondria, reducing caspase processing and activation, Bax activation, depolarization of the mitochondrial membrane, and mitochondrial ultrastructural changes (102). Other studies revealed that BI-1 can enhance the sensitivity of cancer cells to Fas-induced cell death, especially in cells cultured in high glucose media, through a mechanism mediated by the inhibition of NHE activity (103). Icaritin is a compound of plant origin that possesses a large series of biological and pharmacologic activities, such as immunomodulation, improvement of hematopoietic function, and differentiation of cardiomyocytes. It also has significant antitumoral activity, being able to inhibit various hematologic cancer cells, including lymphoma cells (104).
Interestingly, a PROTAC construct named LJ-41 used icaritin as the targeting warhead and recruited CRBN as the E3 ligase. The compound was tested on the Burkitt lymphoma cell line, and it exhibited great antitumoral activity. After further analyses, BI-1 was revealed as a direct target of LJ-41, and the compound induced apoptosis in Burkitt lymphoma cells by activating IRE1α, TRAF, and caspase-12. Phosphorylated ATF6 and CHOP were also induced, which indicates that the apoptosis was induced via the ER stress response (105).
PROTACs targeting BCL6
BCL6 is a protein that acts as a multifunctional regulator and is involved in immune cell development. The main function of BCL6 is the transcriptional repression of its target genes by deacetylating and/or demethylating histones in their vicinity (106). In the humoral immune system, BCL6 contributes to the formation of germinal centers by suppressing the transcription of hundreds of genes, including ATR, CHECK1, TP53, ARF, CDKN1A, CDKN1B, PTEN, IRF4, and PRDM1 (107). At the same time, BCL6 can also induce the transcription and expression of a series of genes involved in proliferation, immune avoidance, antiapoptosis, cell-cycle arrest, and cell differentiation (108). BCL6 is associated with various B-cell lymphomas, in which the protein is constitutively expressed due to different chromosomal translocations or the disruption of regulatory regions of the same BCL6 gene (109). Several BCL6 inhibitors were developed for the treatment of hematologic malignancies, including FX1, WK369, WK499, GSK137, WK500B, and RI-BPI, which were found to be effective preclinically against DLBCL cells (109).
A BCL6 PROTAC recruited CRBN as the E3 Ub ligase. Despite a high degree of BCL6 degradation, the compound did not manage to completely remove BCL6 from a series of DLBCL cell lines. Antitumoral effects were minimal, comparable with the effects of BCL6 inhibitors. A possible explanation for the lack of activity was the presence of small residual BCL6 populations, represented by chromatin-bound BCL6, in the cells treated with the BCL6 PROTAC. This led to the hypothesis that chromatin-bound BCL6 might be more difficult to target and degrade, and additional studies on the residual BCL6 population might provide useful information about the function of this protein in DLBCL (110). Contrary findings were found with the BCL6 degrader, DZ-837, being able to effectively degrade BCL6 and inhibit proliferation in different DLBCL cell lines in vitro and to inhibit tumor growth in vivo. This compound induced cell-cycle arrest in the G1-phase and exhibited synergistic effects in combination with ibrutinib on various DLBCL cell lines (111). Similar results were obtained in another study, in which BI-3802, a BCL6 degrader, effectively reduced BCL6 levels in DLBCL cell lines. Moreover, the compound upregulated a series of BCL6 target genes such as ATM, PRDM1, PTPN6, CD69, IRF4, and DUSP5. The compound was able to induce slow-onset cell growth arrest in the tested cell lines, but it failed to induce apoptosis (112).
PROTACs targeting MELK
MELK, also known as MPK38, is a serine–threonine kinase involved in a series of cellular roles. MELK was found to regulate different signaling pathways, being involved in physiologic processes like cell proliferation, cell-cycle progression, metabolism, and apoptosis. MELK can directly activate ASK1, leading to increased ASK1-mediated signaling to JNK and p38, and it can also induce H2O2-mediated apoptosis via increased ASK1 activity. Furthermore, MELK was found to stimulate TGFβ-mediated signaling. MELK phosphorylates different Smad proteins, a vital step for the stimulation of TGFβ-mediated apoptosis and cell-cycle arrest. MELK also regulates p53 by phosphorylation, this interaction leading to p53 nuclear translocation and cell-cycle arrest and apoptosis (113). The involvement of MELK in cancer is controversial, as numerous studies have had opposing findings. Overexpression of MELK is found in various types of cancer, correlating with high-grade tumors, increased aggressiveness, poor patient outcomes, and resistance to radiotherapy. Similarly, overexpression of MELK was associated with the upregulation of genes involved in cell-cycle progression, such as CDK1, CCNB1/2, TOP2A, AURKB, PLK1, and BUB1. In contrast, MELK-deficient cancer cells could still proliferate normally, leading to the hypothesis that its involvement in cancer progression might be minimal (114). In the context of hematologic malignancies, MELK was found to be associated with DLBCL and MCL, exhibiting upregulated expression and being correlated with increased tumor aggressiveness and poor survival. Treatment with MELK inhibitors reduces the viability of lymphoma cell lines and induces caspase-mediated apoptosis (115). Several MELK inhibitors have been developed for the treatment of different types of cancer, which were reviewed elsewhere (116). OTSSP167 is a MELK inhibitor that was found to possess antitumoral activity against two DLBCL cell lines, inducing apoptosis and cell-cycle arrest (117).
MGP-39, an MELK PROTAC, achieved a high grade of MELK degradation in a Burkitt lymphoma cell line. The compound induced G2–M cell-cycle arrest and apoptosis. In addition, MGP-39 exhibited higher efficiency and lower toxicity than MELK inhibitors (118).
PROTACs targeting PRCs
The Polycomb group of proteins is a family of chromatin-modifying enzymes that act as repressors of genes involved in developmental regulation. These proteins are part of two classes of multiprotein complexes, divided into PRC1 and PRC2 (119). PRC2 consists of SUZ1, EED, EZH2, or EZH1, and the complex associates with histone-binding proteins like RBBP4 or RBBP7. PRC2 functions by catalyzing mono-, di-, and trimethylation on lysine 27 on histone H3 via the EZH1 or EZH2 methyltransferases (120). The PRC2-methylated lysine plays an important role in gene silencing, being involved in chromatin compaction and transcriptional repression (119). PRC2 mutations have been associated with hematologic diseases, with EZH2 mutations frequently occurring in lymphoma. These mutations lead to aberrant histone H3 methylation and altered epigenetic landscapes (121). The list of inhibitors targeting PRC2 component proteins in various types of cancer is vast and has been reviewed elsewhere (122). EL1 is an EZH2 inhibitor that could reduce the proliferation of DLBCL cells by reducing the levels of aberrantly methylated histone H3 (H3K27Me3). Besides targeting WT EZH2, the compound could also target mutated Y641F EZH2. Other examples of EZH2 inhibitors with efficacy in different lymphoma cell lines are GSK126, CPI-169, EHZ2-IN-3, EBI-2511, and UNC1999. All these compounds exhibited good antitumoral activity in different lymphoma cell lines in vitro, as well as in the context of in vivo models. A-395 is an EED inhibitor that could inhibit the activation of the PRC2 complex in two DLBCL cell lines. Astemizole is an FDA-approved drug that inhibits the interaction between EZH2 and EED, leading to an inhibition of the PRC2 complex. The compound had good antitumoral effects, reducing the viability of DLBCL cells (122). Despite their antitumoral activity, the prolonged exposure of cancer cells to EZH2/PRC2 inhibitors ultimately leads to acquired resistance to these compounds. Mutations involved in this acquired resistance are Y111L and Y661D (123). Moreover, it was found that the activation of the IGF-1R, PI3K, and MAPK pathways could induce resistance to GSK126 in a DLBCL cell line (124).
UNC6852 is a PRC2 PROTAC that targets EED and recruits VHL as the E3 ligase and was able to effectively induce degradation of PRC2 components like EED, EZH2, and SUZ12 in a DLBCL cell line. The compound managed to decrease the levels of the H3K27me3 in the EZH2-mutated DLBCL cells, and it led to reduced cell proliferation and increased cytotoxic effects (125). EZH2 degraders displayed high levels of EZH2, EED, and SUZ12 degradation and led to a decrease in H3K27me3 in a series of lymphoma cell lines. Moreover, degraders had antitumoral activity that was more potent than EZH2 inhibitors, reducing cell viability and inducing cell-cycle arrest and apoptosis. Anticancer effects also translated to in vivo settings, with EZH2 degraders having the ability to reduce tumor growth in murine models and to reduce the growth of cells from patients with primary lymphoma (126). Similar results were obtained in other studies, further highlighting the potential of targeting PRC2 using PROTAC technology (127, 128).
PROTACs targeting anaplastic lymphoma kinase
Anaplastic lymphoma kinase (ALK) is a RTK that was first discovered in ALCL cell lines, in which it formed fusion proteins. ALK activation can lead to the activation of different signaling pathways, such as RAS/MAPK, JAK/STAT, PI3K/Akt, and the PLC pathway (129). ALK fusions are frequently present in hematologic malignancies, including ALCL and DLBCL. ALCL is associated with NPM-ALK, TPM3-ALK, TGF-ALK, ATIC-ALK, and CLTC1-ALK fusions, whereas DLBCL is more commonly characterized by the presence of CLTC–ALK and rare SEC31A–ALK and SQSTM1–ALK rearrangements (130). Crizotinib is a small-molecule oral tyrosine kinase inhibitor that represented the first generation of ALK inhibitors to be approved by the FDA. The compound demonstrated increased efficacy in comparison with standard chemotherapy, leading to improved survival rates in a series of clinical studies. Ceritinib represents a next generation of ALK inhibitors that is 20 times more potent than crizotinib. The compound is characterized by increased efficiency, leading to increased survival in patients with crizotinib resistance (131). Despite its efficiency, most patients usually develop resistance to these inhibitors. Studies found that crizotinib resistance commonly develops within 1 to 2 years of treatment, the most common mutations being L1196M and G1269A in the tyrosine kinase domain of ALK. In addition, acquired ceritinib resistance is commonly caused by the mutations G1202R and F1174C/L (132).
An ALK PROTAC construct based on ceritinib as the targeting ligand potently degraded ALK and ALK fusion proteins in a DLBCL lymphoma cell line. The compound inhibited ALK autophosphorylation and downstream STAT3 activation. In addition, the compound reduced proliferation and viability of DLBCL cells in vitro while also exhibiting good bioavailability in vivo (133). Comparable results were obtained in other similar studies (134). Furthermore, an ALK PROTAC based on ceritinib could degrade ALK fusion proteins and have antiproliferative activity in a T-cell lymphoma cell line. The compound had the potential to overcome ceritinib resistance by exhibiting reduced antiproliferative activity in ceritinib resistant cells (135).
Myeloma
Multiple myeloma is a hematologic neoplasm consisting of clonal plasma cells with post-germinal lymphoid B-cell lineage (136). The primary characteristic of multiple myeloma is the accumulation of clonal, malignant plasma cells in the bone marrow. The underlying causes of multiple myeloma are unknown, but possible factors include radiation, exposure to industrial toxins, or viruses (137). In general, multiple myeloma evolves from monoclonal gammopathy of undetermined significance (MGUS), which represents an asymptomatic premalignant stage of clonal plasma cell proliferation and is present in more than 3% of the population above the age of 50. In other cases, multiple myeloma evolves from smoldering multiple myeloma, which is a more advanced, intermediate asymptomatic premalignant stage (138). Multiple myeloma debuts in the bone marrow and leads to bone marrow failure, lytic bone disease, renal failure, immunodeficiency, and early death. Multiple myeloma is characterized by recurrent primary chromosomal alterations that are present in up to 90% of patients at diagnosis. During its progression, the disease accumulates secondary chromosomal alterations that lead to tumor progression. Primary chromosomal alterations are present from the MGUS stage and establish the dominant clone of the neoplasm. These alterations consist of numerical alterations, such as hyperdiploidy and hypodiploidy, and structural alterations. Hyperdiploidy is present in 50% to 60% of patients at diagnosis, and it leads to trisomies in odd-numbered chromosomes, usually 3, 5, 7, 9, 11, 15, 19, and 21, and a karyotype of 48 to 75 chromosomes. Hypodiploidy is characterized by a karyotype of less than 44 chromosomes. This abnormality is far less common than hyperdiploidy but is associated with reduced overall survival. The most common structural aberrations present in multiple myeloma are chromosomal translocations involving the IGH locus, which are present in up to 50% of patients with multiple myeloma. These translocations occur in mature B cells during class switch recombination in the germinal center but can also arise via other molecular mechanisms. The most common fusion proteins resulting from chromosomal translocations are the following: IGH::CCND1, IGH::FGFR3/MMSET, IGH::MAF, IGH::CCND3, and IGH::MAFB (139). Besides chromosomal aberrations, multiple myeloma is characterized by altered signaling pathways, leading to cell proliferation, migration, survival, and drug resistance. Important signaling pathways that are involved in multiple myeloma pathogenesis are the PI3K/AKT/mTOR, RAS/MAPK, JAK/STAT, Wnt/β-catenin, and NF-κB pathways. These pathways can become activated by different mutations or by stimulating factors from the bone marrow TME (140).
PROTACs in multiple myeloma
In multiple myeloma, PROTACs represent a novel therapeutic strategy, aiming to degrade oncogenic proteins that drive disease progression and confer drug resistance. Several PROTACs are being tested for their efficacy in multiple myeloma, showing potential selectivity compared with conventional therapies. A summary of PROTACs designed for multiple myeloma is depicted in Fig. 3.
Figure 3.
PROTACs in multiple myeloma. PROTACs designed to target BCL-xL, BET, NSD3, RAD51, FKBP12, and MCL1. Different designs of PROTACs showed high selectivity for BCL-xL, BET, NSD3, RAD51, FKBP12, and MCL1. PROTACs induced high rates of degradation of their targets leading to a low proliferation rate of plasma cells, reduced viability, and displayed low toxicity. TRD2 PROTAC has a synergistic effect with platinum compounds, DT2216 has synergistic potential with MCL-1 inhibitors, and ARV-825/ARV-763 has a synergistic effect with SMIs. [Created in BioRender. Moldovan, R. (2025) https://BioRender.com/pqp5wmm].
PROTACs represent a novel therapeutic approach in multiple myeloma by inducing selective degradation of oncogenic proteins through the Ub-proteasome system, including targets that were unapproachable before by conventional therapy. Preclinical efficacy was demonstrated in multiple myeloma cell lines and animal models, notably by degrading the BRD4-like proteins, downregulating MYC, and promoting apoptosis. Furthermore, combining the PROTAC (ARV825) with SMIs demonstrated synergistic activity, improving the apoptosis rate and mice survival (26).
The use of a combined therapy of PROTACs with proteasome inhibitors may not be feasible in all cases, as the two therapies have antagonistic effects, and PROTACs need the proteasome to function. However, PROTACs could be used to overcome resistance to proteasome inhibitors, like bortezomib, in patients with multiple myeloma. Resistance to bortezomib can be caused by modifications in the protein degradation pathway, mutations in the proteasome subunits, or upregulation of proteasome assembly. The results showed that the PROTAC designed to degrade the 20S subunit β5 had superior outcomes compared with conventional therapies and exhibited antitumor properties, having the potential to overcome resistance to bortezomib in multiple myeloma–resistant cells (141).
The use of dual therapy, including IMiDs or chemotherapy with PROTACs, is a promising strategy for multiple myeloma. IMiDs such as lenalidomide and pomalidomide act via CRBN, which is an E3 ligase exploited by many PROTACs for substrate recruitment. Thus, PROTACs built on IMiD scaffolds can enhance neosubstrate selectivity and antimyeloma activity, with preclinical data suggesting that synergy may occur in these combinations (27). Chemotherapy could also contribute to PROTACs’ efficacy, leveraging complementary mechanisms of cytotoxicity and protein degradation. Currently, no combination of chemotherapy and PROTACs is used in clinical practice, nor in preclinical setups, as the use of IMiDs or targeted therapies is a better and safer option (26, 142).
PROTACs targeting BCL-xL
DT2216, a BCL-xL PROTAC, was tested in the context of multiple hematologic and solid tumor cell lines, including multiple myeloma, and potently reduces the levels of BCL-xL in two multiple myeloma cell lines. The compound could reduce the viability of BCL-xL–dependent cell lines but showed limited effects on the multiple myeloma cell lines, which are dependent on BCL2 and myeloid cell leukemia 1 (MCL-1) for survival. However, the combined administration of an MCL-1 inhibitor and DT2216 exhibited synergistic effects, greatly reducing the cell viability of the multiple myeloma cells in comparison with individual compounds (143). Similarly, DT2216 degraded up to 80% of BCL-xL present in multiple myeloma cell lines. The compound induced apoptosis in venetoclax-resistant multiple myeloma cell lines that expressed high levels of BCL-xL while having minimal effects in cells expressing low levels of BCL-xL and high levels of BCL2 and/or MCL-1 (144).
PROTACs targeting BET
ARV-825 and ARV-763, BRD4 PROTACs, demonstrated that the PROTACs could induce BRD4 degradation, leading to reduced proliferation, cell-cycle arrest, and apoptosis in all multiple myeloma cell lines tested. PROTACs exhibited greater antitumoral effects than the BRD4 inhibitors JQ1 and OTX015. PROTAC treatment led to the downregulation of various genes, including MYC, HNF4A, E2F, PLK1, CHEK1, and cyclins B1 and E1, and it managed to suppress the Akt/mTOR signaling pathway. In addition, PROTACs could overcome drug resistance, possessing antitumoral activity in multiple myeloma cell lines resistant to various chemotherapeutic drugs like dexamethasone, doxorubicin, bortezomib, carfilzomib, lenalidomide, and pomalidomide (145). Similar results were obtained in other studies, further showcasing the potential of ARV-825 and ARV-763 in the treatment of multiple myeloma. In addition to antitumoral effects on immortalized multiple myeloma cell lines, the studies found that the PROTACs could also reduce the viability of plasma cells derived from patients with multiple myeloma. These studies highlighted that the combined treatment of CRBN-recruiting ARV-825 and IMiDs like lenalidomide and pomalidomide presented antagonistic effects. In contrast, the administration of proteasome inhibitors such as bortezomib and carfilzomib inhibited the activity of both the CRBN- and VHL-recruiting PROTACs (26, 146). In addition, ARV-825 seems to act synergistically with different SMIs on various multiple myeloma cell lines. Such SMIs include cediranib, crenolanib, GSK 1904529A, motesanib, LY3023414, selinexor, gilteritinib, LY333531, IGC003, and ruxolitinib. Besides the observed in vitro effects, ARV-825 could inhibit multiple myeloma growth in vivo, improving the overall survival of SCID beige mice with multiple myeloma xenografts (26). ARV-825 was found to act synergistically with the CDK9 inhibitor AZD 4573 in different multiple myeloma cell lines, both in vitro and in vivo. The combination of the compounds (ARV-825 and AZD 4573) reduced the expression of BRD2, BRD4, MYC, and phosphorylated RNA polymerase II, inducing apoptosis and decreasing cell proliferation (142).
PROTACs targeting NSD3
The nuclear receptor-binding SET domain (NSD) family of proteins comprises histone lysine methyltransferases that are involved in regulating chromatin integrity and gene expression by carrying out mono- or dimethylation reactions at lysine 36 in histone H3, generating H3K36me1 and H3K36me2. The three members of the NSD family are NSD1, NSD2, and NSD3 (147). NSD family members are multidomain proteins, the SET domain being involved in catalytic activity. Besides the SET domain, NSD proteins possess two PWWP (Pro-Trp-Trp-Pro) domains, which have been shown to bind methylated H3K36 to stabilize NSD2 and NSD1 at the level of chromatin. NSD3 exists in three different isoforms: NSD3-long, NSD3-short, and NSD3-WHISTLE. NSD3-short was found to interact with BRD4, a protein involved in oncogene expression. Besides histone methylation, NSD3 has been shown to methylate EGFR and p65, an NF-κβ subunit, leading to their activation (148). The NSD family was found to be associated with myeloma, which led to the development of SET domain inhibitors, like sinefungin, MCTP-39, BI-9321, and MS9715. KTX-1001, an NSD2 inhibitor, progressed into phase I clinical trials for the treatment of refractory multiple myeloma (149).
MS9715 is an NSD3-targeting PROTAC using BI-9321 as a targeting ligand that was shown to potently degrade NSD3 in hematologic cancer cells, including multiple myeloma cells. The compound managed to degrade both NSD3-long and NSD3-short in the multiple myeloma cell line. In contrast, BI-3921 and MS9715 (an analog incapable of binding VHL) did not reduce NSD3 levels. MS9715 could reduce cell proliferation and cell viability in a multiple myeloma cell line, leading to increased apoptosis in comparison with controls. In addition, the compound induced c-Myc degradation, leading to a repressed expression of c-Myc–related gene sets (150).
PROTACs targeting RAD51
RAD51 is a recombinase that is vital to the homologous recombination mechanism for repairing double-strand breaks (DSB) in DNA. RAD51 is involved in three DSB repair pathways: gene conversion, synthesis-dependent strand annealing, and RAD51-dependent break-induced replication, all sharing initial steps. First, the MRE11-RAD50-NBS1 complex with CtIP recognizes and binds DSBs, enabling short- and long-range resection, which exposes 3′ single-stranded DNA (ssDNA) overhangs. The ssDNA is then coated by replication protein A (RPA) to prevent the formation of ssDNA secondary structures and degradation. Then, RAD51 displaces RPA, assembling nucleoprotein filaments with the three ssDNA ends. The assembly of these filaments is stimulated by a series of RAD51 mediators, including the RAD51 loader, BRCA2, and RAD51 paralogs (RAD51B, RAD51C, RAD51D, XRCC2, XRCC3, and SWSAP1; ref. 151). In contrast to its roles in protecting DNA stability, the overexpression of RAD51 was found to be associated with many solid and hematologic tumors. The overexpression of RAD51 can lead to improper hyper-recombination, leading to genomic instability. RAD51 was found to be associated with drug resistance in leukemia, epithelial-to-mesenchymal transition–associated drug resistance, drug resistance of cancer stem cells, and hypoxia chemoresistance in cancer cells (152). It was found that homologous recombination mediated by RAD51 is highly elevated in multiple myeloma, and this process leads to the acquisition of genetic alterations in multiple myeloma cells (153). Therefore, the targeted degradation of RAD51 might be an efficient way of dealing with multiple myeloma.
TRD2, a RAD51 PROTAC, was tested in the context of IMiD-resistant multiple myeloma. The compound had the ability to degrade RAD51 via proteasomal degradation in IMiD-sensitive and IMiD-resistant multiple myeloma cells, reducing cell viability. While exhibiting antiproliferative effects in both the sensitive and resistant multiple myeloma cells, IMiD-resistant cells required a higher concentration of TRD2 for reduction in cell viability due to decreased levels of CRBN. Combined treatment of TRD2 and the chemotherapeutic drug cisplatin was found to act in a synergistic manner, leading to reduced cell viability in the sensitive and resistant multiple myeloma cells compared with the individual compounds. Moreover, the combination of TRD2 and cisplatin was tested in vivo by using BALB/c nude mice xenografted with lenalidomide-resistant multiple myeloma cells. The results revealed that the combination of TRD2 and cisplatin led to decreased tumor growth in vivo compared with the individual compounds, while exhibiting reduced toxicity (154).
PROTACs targeting FKBP12
FKBP12 represents an immunophilin that acts as the cytoplasmic receptor for FK506 and rapamycin, mediating the immunosuppressive functions of these drugs. FKBP12 was found to catalyze cis-trans isomerization of the proline amide in a tetrapeptide substrate, being involved in immunomodulatory processes. Binding of FK506 or rapamycin inhibits this function, leading to immunosuppressive effects. FK506/FKBP12 inhibits transcriptional activation of IL2, preventing antigen receptor–induced activation of T lymphocytes. This complex interacts with calcineurin, inhibiting its activity and preventing activation of NFAT, leading to inhibited IL2 transcription. FKBP12 was found to be an important regulator of the TGFβ family type I receptors, being able to inhibit BMP-mediated signaling (155). Upon BPN binding, receptors become active and phosphorylate SMAD1, SMAD5, and SMAD8, rendering them active and increasing their association with SMAD4 (156). With respect to multiple myeloma, it was found that BMP-induced signaling can induce apoptosis via activation of SMAD1/5/8, causing downregulation of c-Myc and BCL-xL. Therefore, targeting FKBP12 could potentiate the activation of SMAD1/5/8, leading to increased apoptosis in multiple myeloma cells (157).
Different FKBP12 PROTACs were tested in the context of multiple myeloma. The compounds (RC32, 5a1, and 6b4) could potently degrade FKBP12 levels in multiple myeloma cells in vitro, with the most efficient being 5a1. 5a1 had increased specificity, with minimal degradation effects on other FKBP proteins like FKBP4 and FKBP5. The combination of 5a1 and BMP6 could significantly increase apoptosis via SMAD1/5 activation in multiple myeloma cells compared with BMP6 alone, highlighting that FKBP12 degradation potentiates BMP-induced apoptosis in multiple myeloma. 5a1 caused no calcineurin and NFAT inhibition in a T-cell line, suggesting that FKBP12 PROTACs do not have the same immunosuppressive effects as the FKBP12 inhibitor, FK506 (158).
PROTACs targeting MCL-1
MCL-1 is an antiapoptotic protein from the BCL2 family of proteins. The protein was found to contain three putative BH domains and to inhibit apoptosis by binding and sequestering the proapoptotic Bak and Bax proteins, preventing the formation of pores in the mitochondrial membrane. MCL-1 can also bind and sequester a subset of the BH3-only proapoptotic BCL2 family members involved in the polymerization of Bak and Bax. MCL-1 was found to be required for the development and maintenance of T and B cells and neural development, while also being crucial for mouse embryogenesis. Expression of MCL-1 is growth factor–dependent; a series of trophic factors like ILs, EGF, and VEGF can induce its transcriptional upregulation (159). MCL-1 was found to have a pivotal role in multiple myeloma, being the main antiapoptotic BCL2 member that protects multiple myeloma cells against apoptosis and promotes their survival. In addition, it was observed that IL6 secreted by bone marrow stroma cells from the TME of multiple myeloma cells leads to the activation of JAK/STAT signaling, promoting MCL-1 expression (160).
The AMCL-1 PROTAC construct is based on the MCL-1 inhibitor A-1210477. The compound, named dMCL1-2, induced significant degradation of MCL-1 in a multiple myeloma cell line via proteasomal degradation. Moreover, the compound could induce apoptosis after 24 hours of treatment in multiple myeloma cells by increasing cleaved caspase-3 levels (161).
Conclusion
Recent advances in the development of PROTACs have positioned these therapeutic agents as a promising strategy for lymphoma and myeloma. As PROTACs leverage the Ub–proteasome system to degrade in a selective manner oncogenic proteins, including those that were considered “undruggable” or resistant to current therapy, multiple studies have evaluated the efficacy of PROTACs. Early data from current studies presented in this review highlight the potential benefits of using PROTACs as a therapeutic strategy in lymphoma and myeloma. PROTACs have shown the ability to overcome drug resistance by degrading mutant or overexpressed proteins that drive the disease to a refractory state. PROTACs exhibit low toxicity and less side effects due to their high affinity for the targeted proteins. Additionally, the reusability of PROTACs could facilitate repeated cycles of therapy without the need for additional therapy, offering the prospect of low-dose therapy with high efficacy. Furthermore, several features of PROTACs can be exploited to synergistically enhance the efficacy of bispecific antibodies or CAR T cells in different malignancies, as they increase the abundance of tumor antigen–derived peptides presented to MHC class I molecules, enhance T-cell activation, and stimulate cytokine secretion, thereby enhancing the immune response. PROTACs deserve attention from the scientific community, as continued translational research on their efficacy, toxicity, and pharmacodynamics could lead to clinical trials that may highlight the full potential of PROTACs in lymphoma and myeloma.
Acknowledgments
The work is funded by a national grant from the Romanian Research Ministry–PNRR 1089 2024-2026 (PNRR/2022/C9/MCID/18, Contract No. 760278/March 26, 2024; to C. Tomuleasa, A.B. Tigu, M. Nistor, D. Gulei, and H. Einsele); by an international grant from the European Commission – Horizon Europe Framework Network, HORIZON-TMA-MSCA-DN (Proposal Number 101227725 – “Advancing in the CHallenge of Improving Lymphoma and LEukemia Survival” to C. Tomuleasa); and by a bilateral collaboration grant between Romania and Moldova (PN-IV-P8-8.3-ROMD-2023-0036, to C. Tomuleasa). A. Ciechanover is supported by grants from the Israel Science Foundation (ISF), the Israel Personal Medicine Partnership administered by the ISF, and the Adelson Medical Research Foundation and by a Professorship from the Israel Cancer Research Fund USA. S. Kobold is supported by the international doctoral program “i-Target: immunotargeting of cancer” (funded by the Elite Network of Bavaria), the Bavarian Cancer Research Center (TANGO to S. Kobold), the Deutsche Forschungsgemeinschaft (grant number: KO5055-2-1 and KO5055/3-1), the Melanoma Research Alliance (grant number 409510), the Marie Sklodowska-Curie Training Network for Optimizing Adoptive T-Cell Therapy of Cancer (funded by the Horizon 2020 programme of the European Union; grant 955575), the Marie Sklodowska-Curie Training Network for tracking and controlling therapeutic immune cells in cancer (funded by the Horizon Programme of the EU, grant 101168810), the Else Kröner-Fresenius-Stiftung (IOLIN), German Cancer Aid (AvantCAR.de and 70117182), the Wilhelm-Sander-Stiftung, the Ernst Jung Stiftung, the Institutional Strategy LMUexcellent of LMU Munich (within the framework of the German Excellence Initiative), the Go-Bio Initiative, the m4-Award of the Bavarian Ministry for Economic Affairs, Bundesministerium fuör Bildung und Forschung, the EUROSTAR-Programm, European Research Council (Starting Grant 756017, PoC Grant 101100460, and CoG 101124203), the SFB-TRR 338/1 2021–452881907, Fritz-Bender Foundation, Deutsche José Carreras Leukämie Stiftung, Hector Foundation, Bavarian Research Foundation (BAYCELLator), the Monika Kutzner Foundation, Bruno and Helene Jöster Foundation (360° CAR), Dr. Rurainski Foundation, and Brigitte and Dr. Konstanze Wegener Foundation.
Contributor Information
Ciprian Tomuleasa, Email: ciprian.tomuleasa@umfcluj.ro.
Diana Gulei, Email: diana.gulei@umfcluj.ro.
Aaron Ciechanover, Email: aaroncie@technion.ac.il.
Authors’ Disclosures
H. Einsele reports grants from Johnson & Johnson during the conduct of the study as well as grants, personal fees, and other support from Johnson & Johnson; Bristol Myers Squibb; Amgen; GSK; and Sanofi and personal fees and other support from Takeda and Novartis outside the submitted work. No disclosures were reported by the other authors.
References
- 1. Nalawansha DA, Crews CM. PROTACs: an emerging therapeutic modality in precision medicine. Cell Chem Biol 2020;27:998–1014. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 2. Kliza K, Husnjak K. Resolving the complexity of ubiquitin networks. Front Mol Biosci 2020;7:21. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 3. Chen Y, Yang Q, Xu J, Tang L, Zhang Y, Du F, et al. PROTACs in gastrointestinal cancers. Mol Ther Oncolytics 2022;27:204–23. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 4. Wang C, Zhang Y, Chen W, Wu Y, Xing D. New-generation advanced PROTACs as potential therapeutic agents in cancer therapy. Mol Cancer 2024;23:110. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 5. Sun X, Gao H, Yang Y, He M, Wu Y, Song Y, et al. PROTACs: great opportunities for academia and industry. Signal Transduct Target Ther 2019;4:64. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 6. Bekes M, Langley DR, Crews CM. PROTAC targeted protein degraders: the past is prologue. Nat Rev Drug Discov 2022;21:181–200. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 7. Pettersson M, Crews CM. PROteolysis TArgeting Chimeras (PROTACs) - past, present and future. Drug Discov Today Technol 2019;31:15–27. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 8. Alabi SB, Crews CM. Major advances in targeted protein degradation: PROTACs, LYTACs, and MADTACs. J Biol Chem 2021;296:100647. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 9. Gao S, Wang S, Song Y. Novel immunomodulatory drugs and neo-substrates. Biomark Res 2020;8:2. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 10. Bondeson DPSmith BE, Burslem GM, Buhimschi AD, Hines J, Jaime-Figueroa S, et al. Lessons in PROTAC design from selective degradation with a promiscuous warhead. Cell Chem Biol 2018;25:78–87.e75. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 11. Bondarev AD, Attwood MM, Jonsson J, Chubarev VN, Tarasov VV, Schiöth HB. Recent developments of HDAC inhibitors: emerging indications and novel molecules. Br J Clin Pharmacol 2021;87:4577–97. [DOI] [PubMed] [Google Scholar]
- 12. Kadier K, Niu T, Ding B, Chen B, Qi X, Chen D, et al. PROTAC-mediated HDAC7 protein degradation unveils its deacetylase-independent proinflammatory function in macrophages. Adv Sci (Weinh) 2024;11:e2309459. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 13. Cantley J, Ye X, Rousseau E, Januario T, Hamman BD, Rose CM, et al. Selective PROTAC-mediated degradation of SMARCA2 is efficacious in SMARCA4 mutant cancers. Nat Commun 2022;13:6814. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 14. Huo X, Zhang W, Zhao G, Chen Z, Dong P, Watari H, et al. FAK PROTAC inhibits ovarian tumor growth and metastasis by disrupting kinase dependent and independent pathways. Front Oncol 2022;12:851065. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 15. Deininger MW, Goldman JM, Melo JV. The molecular biology of chronic myeloid leukemia. Blood 2000;96:3343–56. [PubMed] [Google Scholar]
- 16. Cruz-Rodriguez N, Tang H, Bateman B, Tang W, Deininger M.. BCR::ABL1 proteolysis-targeting chimeras (PROTACs): the new frontier in the treatment of Ph+ leukemias? Leukemia 2024;38:1885–93. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 17. Lai AC, Toure M, Hellerschmied D, Salami J, Jaime-Figueroa S, Ko E, et al. Modular PROTAC design for the degradation of oncogenic BCR-ABL. Angew Chem Int Ed Engl 2016;55:807–10. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 18. Burslem GM, Crews CM. Proteolysis-targeting chimeras as therapeutics and tools for biological discovery. Cell 2020;181:102–14. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 19. Cornu M, Lemaitre T, Kieffer C, Voisin-Chiret AS. PROTAC 2.0: expanding the frontiers of targeted protein degradation. Drug Discov Today 2025;30:104376. [DOI] [PubMed] [Google Scholar]
- 20. Cheng J, Hu X, Dai Z, Zeng Y, Jin J, Mu W, et al. Targeting intracellular LMP2 with costimulatory signal-armed antibody-like TCR T cells. JCI Insight 2025;10:e178572. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 21. Gao H, Sun X, Rao Y. PROTAC technology: opportunities and challenges. ACS Med Chem Lett 2020;11:237–40. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 22. Anaya YA, Barragan M, Bracho RP, Shaham SH, Bandyopadhyay D, George E, et al. Proteolysis-targeting chimeras in cancer therapy: targeted protein degradation for next-generation treatment. Cancer 2025;131:e70132. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 23. Wu Y, Zhang J, Zhu X, Zhang Y. Developing PROteolysis TArgeting Chimeras (PROTACs) for hematologic malignancies. Cancer Lett 2022;544:215808. [DOI] [PubMed] [Google Scholar]
- 24. Zhang Q, Liu Y, Zhang J, Li Y, Wang J, Liu N, et al. Discovery of novel penetrating peptides able to target human leukemia and lymphoma for enhanced PROTAC delivery. Eur J Med Chem 2024;277:116734. [DOI] [PubMed] [Google Scholar]
- 25. Liu Y, Zhang X, Chen X, Zhang F. Proteolysis-targeting chimera (PROTAC) nanomedicines toward cancer treatment: from synthesis to therapeutic delivery. Biomaterials 2026;325:123621. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 26. Lim SL, Damnernsawad A, Shyamsunder P, Chng WJ, Han BC, Xu L, et al. Proteolysis targeting chimeric molecules as therapy for multiple myeloma: efficacy, biomarker and drug combinations. Haematologica 2019;104:1209–20. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 27. Yamanaka S, Furihata H, Yanagihara Y, Taya A, Nagasaka T, Usui M, et al. Lenalidomide derivatives and proteolysis-targeting chimeras for controlling neosubstrate degradation. Nat Commun 2023;14:4683. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 28. Moreau K, Coen M, Zhang AX, Pachl F, Castaldi MP, Dahl G, et al. Proteolysis-targeting chimeras in drug development: a safety perspective. Br J Pharmacol 2020;177:1709–18. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 29. Syahputra EW, Lee H, Cho H, Park HJ, Park K-S, Hwang D. PROTAC delivery strategies for overcoming physicochemical properties and physiological barriers in targeted protein degradation. Pharmaceutics 2025;17:501. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 30. Saraswat AL, Vartak R, Hegazy R, Patel A, Patel K. Drug delivery challenges and formulation aspects of proteolysis targeting chimera (PROTACs). Drug Discov Today 2023;28:103387. [DOI] [PubMed] [Google Scholar]
- 31. Yu Y, Hu W, Xu Y, Xu H-B, Gao J. Advancements in delivery Systems for Proteolysis-Targeting Chimeras (PROTACs): overcoming challenges and expanding biomedical applications. J Control Release 2025;382:113719. [DOI] [PubMed] [Google Scholar]
- 32. Iannozzi NT, Giuliani N, Storti P. Deciphering the bone marrow microenvironment’s role in multiple myeloma immunotherapy resistance. Front Immunol 2025;16:1613265. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 33. Fan L, Tong W, Wei A, Mu X. Progress of proteolysis-targeting chimeras (PROTACs) delivery system in tumor treatment. Int J Biol Macromol 2024;275:133680. [DOI] [PubMed] [Google Scholar]
- 34. Li R, Zhang S, Xu Y, Liu R, Dai Z. Nanoenabled strategies enhancing PROTACs for cancer therapy. Bioconjug Chem 2025;36:1582–7. [DOI] [PubMed] [Google Scholar]
- 35. Massafra V, Tundo S, Dietzig A, Ducret A, Jost C, Klein C, et al. Proteolysis-targeting chimeras enhance T cell bispecific antibody-driven T cell activation and effector function through increased MHC class I antigen presentation in cancer cells. J Immunol 2021;207:493–504. [DOI] [PubMed] [Google Scholar]
- 36. Köckenberger JE, Cardenas Alcoser ES, Chang ET, Gutkind JS, Ferguson FM. PROTACs in cancer immunotherapy: a minireview. Biochem Soc Trans 2025;53:1273–81. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 37. Jiang M, Bennani NN, Feldman AL. Lymphoma classification update: T-cell lymphomas, Hodgkin lymphomas, and histiocytic/dendritic cell neoplasms. Expert Rev Hematol 2017;10:239–49. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 38. Swerdlow SH, Campo E, Pileri SA, Harris NL, Stein H, Siebert R, et al. The 2016 revision of the World Health Organization classification of lymphoid neoplasms. Blood 2016;127:2375–90. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 39. Silkenstedt E, Salles G, Campo E, Dreyling M. B-cell non-Hodgkin lymphomas. Lancet 2024;403:1791–807. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 40. Laurent C, Cook JR, Yoshino T, Quintanilla-Martinez L, Jaffe ES. Follicular lymphoma and marginal zone lymphoma: how many diseases? Virchows Arch 2023;482:149–62. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 41. Traverse-Glehen A, Bertoni F, Thieblemont C, Zucca E, Coiffier B, Berger F, et al. , Nodal marginal zone B-cell lymphoma: a diagnostic and therapeutic dilemma. Oncology (Williston Park) 2012;26:92–9–103–4. [PubMed] [Google Scholar]
- 42. Shanbhag S, Ambinder RF. Hodgkin lymphoma: a review and update on recent progress. CA Cancer J Clin 2018;68:116–32. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 43. Wang H-W, Balakrishna JP, Pittaluga S, Jaffe ES. Diagnosis of Hodgkin lymphoma in the modern era. Br J Haematol 2019;184:45–59. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 44. Weniger MA, Küppers R. Molecular biology of Hodgkin lymphoma. Leukemia 2021;35:968–81. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 45. Borrás C, Mas-Bargues C, Román-Domínguez A, Sanz-Ros J, Gimeno-Mallench L, Inglés M, et al. BCL-xL, a mitochondrial protein involved in successful aging: from C. elegans to human centenarians. Int J Mol Sci 2020;21:418. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 46. Morales-Martínez M, Vega MI. Roles and regulation of BCL-xL in hematological malignancies. Int J Mol Sci 2022;23:2193. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 47. He Y, Koch R, Budamagunta V, Zhang P, Zhang X, Khan S, et al. DT2216-a Bcl-xL-specific degrader is highly active against Bcl-xL-dependent T cell lymphomas. J Hematol Oncol 2020;13:95. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 48. Zhang X, He Y, Zhang P, Budamagunta V, Lv D, Thummuri D, et al. Discovery of IAP-recruiting BCL-XL PROTACs as potent degraders across multiple cancer cell lines. Eur J Med Chem 2020;199:112397. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 49. Wang Z, Skwarska A, Poigaialwar G, Chaudhry S, Rodriguez-Meira A, Sui P, et al. Efficacy of a novel BCL-xL degrader, DT2216, in preclinical models of JAK2-mutated post-MPN AML. Blood 2025;146:341–55. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 50. Zhang S, Chen Y, Xu Z, Yang J, Sun R, Wang J, et al. The PROTAC selectively degrading Bcl-xL represents a novel Hedgehog pathway inhibitor with capacity of combating resistance to Smoothened inhibitors while sparing bone growth. Theranostics 2022;12:7476–90. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 51. Hu X, Li J, Fu M, Zhao X, Wang W. The JAK/STAT signaling pathway: from bench to clinic. Signal Transduct Target Ther 2021;6:402. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 52. Agashe RP, Lippman SM, Kurzrock R. JAK: not just another kinase. Mol Cancer Ther 2022;21:1757–64. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 53. Zou S, Tong Q, Liu B, Huang W, Tian Y, Fu X. Targeting STAT3 in cancer immunotherapy. Mol Cancer 2020;19:145. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 54. Waldmann TA, Chen J. Disorders of the JAK/STAT pathway in T cell lymphoma pathogenesis: implications for immunotherapy. Annu Rev Immunol 2017;35:533–50. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 55. Ogiya D, Liu J, Ohguchi H, Kurata K, Samur MK, Tai Y-T, et al. The JAK-STAT pathway regulates CD38 on myeloma cells in the bone marrow microenvironment: therapeutic implications. Blood 2020;136:2334–45. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 56. Shawky AM, Almalki FA, Abdalla AN, Abdelazeem AH, Gouda AM. A comprehensive overview of globally approved JAK inhibitors. Pharmaceutics 2022;14:1001. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 57. Downes CEJ, McClure BJ, Bruning JB, Page E, Breen J, Rehn J, et al. Acquired JAK2 mutations confer resistance to JAK inhibitors in cell models of acute lymphoblastic leukemia. NPJ Precis Oncol 2021;5:75. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 58. Furqan M, Akinleye A, Mukhi N, Mittal V, Chen Y, Liu D. STAT inhibitors for cancer therapy. J Hematol Oncol 2013;6:90. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 59. Bai L, Zhou H, Xu R, Zhao Y, Chinnaswamy K, McEachern D, et al. A potent and selective small-molecule degrader of STAT3 achieves complete tumor regression in vivo. Cancer Cell 2019;36:498–511.e417. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 60. Zhou H, Bai L, Xu R, Zhao Y, Chen J, McEachern D, et al. Structure-based discovery of SD-36 as a potent, selective, and efficacious PROTAC degrader of STAT3 protein. J Med Chem 2019;62:11280–300. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 61. Hall J, Zhang Z, Bhattacharya S, Wang D, Alcantara M, Liang Y, et al. Oligo-PROTAC strategy for cell-selective and targeted degradation of activated STAT3. Mol Ther Nucleic Acids 2024;35:102137. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 62. Alcock LJ, Chang Y, Jarusiewicz JA, Actis M, Nithianantham S, Mayasundari A, et al. Development of potent and selective janus kinase 2/3 directing PG-PROTACs. ACS Med Chem Lett 2022;13:475–82. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 63. Messex JK, Liou GY. Targeting BTK signaling in the microenvironment of solid tumors as a feasible cancer therapy option. Cancers (Basel) 2021;13:2198. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 64. Nawaratne V, Sondhi AK, Abdel-Wahab O, Taylor J. New means and challenges in the targeting of BTK. Clin Cancer Res 2024;30:2333–41. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 65. Tam C, Thompson PA. BTK inhibitors in CLL: second-generation drugs and beyond. Blood Adv 2024;8:2300–9. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 66. Cool A, Nong T, Montoya S, Taylor J. BTK inhibitors: past, present, and future. Trends Pharmacol Sci 2024;45:691–707. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 67. Woyach JA, Furman RR, Liu T-M, Ozer HG, Zapatka M, Ruppert AS, et al. Resistance mechanisms for the Bruton's tyrosine kinase inhibitor ibrutinib. N Engl J Med 2014;370:2286–94. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 68. Sun Y, Zhao X, Ding N, Gao H, Wu Y, Yang Y, et al. PROTAC-induced BTK degradation as a novel therapy for mutated BTK C481S induced ibrutinib-resistant B-cell malignancies. Cell Res 2018;28:779–81. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 69. Lim YS, Yoo S-M, Patil V, Kim HW, Kim H-H, Suh B, et al. Orally bioavailable BTK PROTAC active against wild-type and C481 mutant BTKs in human lymphoma CDX mouse models. Blood Adv 2023;7:92–105. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 70. Guo WH, Qi X, Yu X, Liu Y, Chung C-I, Bai F, et al. Enhancing intracellular accumulation and target engagement of PROTACs with reversible covalent chemistry. Nat Commun 2020;11:4268. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 71. Yu X, Guo WH, Lin H, Cheng R, Monroy EY, Jin F, et al. Discovery of a potent BTK and IKZF1/3 triple degrader through reversible covalent BTK PROTAC development. Curr Res Chem Biol 2022;2:100029. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 72. Buhimschi AD, Armstrong HA, Toure M, Jaime-Figueroa S, Chen TL, Lehman AM, et al. Targeting the C481S ibrutinib-resistance mutation in Bruton’s tyrosine kinase using PROTAC-mediated degradation. Biochemistry 2018;57:3564–75. [DOI] [PubMed] [Google Scholar]
- 73. Zhu C, Yang Z, Zhang Y, Li Z, Li G, Yang B, et al. PROTAC for Bruton’s tyrosine kinase degradation alleviates inflammation in autoimmune diseases. Cell Discov 2024;10:82. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 74. Ma T, Chen Y, Yi Z-G, Li Y-H, Bai J, Li L-J, et al. BET in hematologic tumors: immunity, pathogenesis, clinical trials and drug combinations. Genes Dis 2023;10:2306–19. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 75. Martínez-Martín S, Beaulieu ME, Soucek L. Targeting MYC-driven lymphoma: lessons learned and future directions. Cancer Drug Resist 2023;6:205–22. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 76. Delmore JE, Issa GC, Lemieux ME, Rahl PB, Shi J, Jacobs HM, et al. BET bromodomain inhibition as a therapeutic strategy to target c-Myc. Cell 2011;146:904–17. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 77. Zhang P, Zhang M. Epigenetic alterations and advancement of treatment in peripheral T-cell lymphoma. Clin Epigenetics 2020;12:169. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 78. Yang H, Green MR. Epigenetic programing of B-cell lymphoma by BCL6 and its genetic deregulation. Front Cell Dev Biol 2019;7:272. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 79. Basheer F, Huntly BJ. BET bromodomain inhibitors in leukemia. Exp Hematol 2015;43:718–31. [DOI] [PubMed] [Google Scholar]
- 80. Kamijo H, Sugaya M, Takahashi N, Oka T, Miyagaki T, Asano Y, et al. BET bromodomain inhibitor JQ1 decreases CD30 and CCR4 expression and proliferation of cutaneous T-cell lymphoma cell lines. Arch Dermatol Res 2017;309:491–7. [DOI] [PubMed] [Google Scholar]
- 81. Hogg SJ, Newbold A, Vervoort SJ, Cluse LA, Martin BP, Gregory GP, et al. BET inhibition induces apoptosis in aggressive B-cell lymphoma via epigenetic regulation of BCL-2 family members. Mol Cancer Ther 2016;15:2030–41. [DOI] [PubMed] [Google Scholar]
- 82. To KKW, Xing E, Larue RC, Li P-K. BET bromodomain inhibitors: novel design strategies and therapeutic applications. Molecules 2023;28:3043. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 83. Umisa H. [Patho-morphological studies on non-specific liver cirrhosis (author’s transl)]. Rinsho Byori 1974;22:475–80. [PubMed] [Google Scholar]
- 84. Wang H, Wu X, Gao J, Chen S, Zhou Z, Zhang L, et al. Targeting Myc through BET-PROTAC elicits potent anti-lymphoma activity in diffuse large B cell lymphoma. Invest New Drugs 2025;43:621–33. [DOI] [PubMed] [Google Scholar]
- 85. Sun B, Fiskus W, Qian Y, Rajapakshe K, Raina K, Coleman KG, et al. BET protein proteolysis targeting chimera (PROTAC) exerts potent lethal activity against mantle cell lymphoma cells. Leukemia 2018;32:343–52. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 86. Fiskus W, Mill CP, Perera D, Birdwell C, Deng Q, Yang H, et al. BET proteolysis targeted chimera-based therapy of novel models of Richter Transformation-diffuse large B-cell lymphoma. Leukemia 2021;35:2621–34. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 87. Tarantelli C, Cannas E, Ekeh H, Moscatello C, Gaudio E, Cascione L, et al. The bromodomain and extra-terminal domain degrader MZ1 exhibits preclinical anti-tumoral activity in diffuse large B-cell lymphoma of the activated B cell-like type. Explor Target Antitumor Ther 2021;2:586–601. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 88. Li S, Strelow A, Fontana EJ, Wesche H. IRAK-4: a novel member of the IRAK family with the properties of an IRAK-kinase. Proc Natl Acad Sci U S A 2002;99:5567–72. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 89. Bennett J, Starczynowski DT. IRAK1 and IRAK4 as emerging therapeutic targets in hematologic malignancies. Curr Opin Hematol 2022;29:8–19. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 90. Chen Y, Ning Y, Bai G, Tong L, Zhang T, Zhou J, et al. Design, synthesis, and biological evaluation of IRAK4-targeting PROTACs. ACS Med Chem Lett 2021;12:82–7. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 91. Zhang J, Fu L, Shen B, Liu Y, Wang W, Cai X, et al. Assessing IRAK4 functions in ABC DLBCL by IRAK4 kinase inhibition and protein degradation. Cell Chem Biol 2020;27:1500–9.e1513. [DOI] [PubMed] [Google Scholar]
- 92. Sahu N, August A. ITK inhibitors in inflammation and immune-mediated disorders. Curr Top Med Chem 2009;9:690–703. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 93. Weeks S, Harris R, Karimi M. Targeting ITK signaling for T cell-mediated diseases. iScience 2021;24:102842. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 94. Hussain A, Yu L, Faryal R, Mohammad DK, Mohamed AJ, Smith CIE. TEC family kinases in health and disease–loss-of-function of BTK and ITK and the gain-of-function fusions ITK-SYK and BTK-SYK. FEBS J 2011;278:2001–10. [DOI] [PubMed] [Google Scholar]
- 95. Jiang B, Weinstock DM, Donovan KA, Sun HW, Wolfe A, Amaka S, et al. ITK degradation to block T cell receptor signaling and overcome therapeutic resistance in T cell lymphomas. Cell Chem Biol 2023;30:383–93.e6. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 96. Charrier J-D, Knegtel RMA. Advances in the design of ITK inhibitors. Expert Opin Drug Discov 2013;8:369–81. [DOI] [PubMed] [Google Scholar]
- 97. Lo HY. Itk inhibitors: a patent review. Expert Opin Ther Pat 2010;20:459–69. [DOI] [PubMed] [Google Scholar]
- 98. Liu C, Zheng D, Pu X, Li S. HDAC7: a promising target in cancer. Front Oncol 2024;14:1327933. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 99. Lu W, Zhuang G, Guan Y, Li Y, Liu L, Xiao M. Comprehensive analysis of HDAC7 expression and its prognostic value in diffuse large B cell lymphoma: a review. Medicine (Baltimore) 2023;102:e34577. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 100. Gryder BE, Sodji QH, Oyelere AK. Targeted cancer therapy: giving histone deacetylase inhibitors all they need to succeed. Future Med Chem 2012;4:505–24. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 101. Jin Y, Qi X, Yu X, Cheng X, Chen B, Wu M, et al. Discovery of a potential hematologic malignancies therapy: selective and potent HDAC7 PROTAC degrader targeting non-enzymatic function. Acta Pharm Sin B 2025;15:1659–79. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 102. Chae H-J, Kim H-R, Xu C, Bailly-Maitre B, Krajewska M, Krajewski S, et al. BI-1 regulates an apoptosis pathway linked to endoplasmic reticulum stress. Mol Cell 2004;15:355–66. [DOI] [PubMed] [Google Scholar]
- 103. Lee G-H, Kim H-R, Chae H-J. BI-1 enhances Fas-induced cell death through a Na+/H+-associated mechanism. BMB Rep 2014;47:393–8. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 104. Yang XJ, Xi YM, Li ZJ. Icaritin: a novel natural candidate for hematological malignancies therapy. Biomed Res Int 2019;2019:4860268. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 105. Zhang P, Zhang Z, Li J, Xu M, Lu W, Chen M, et al. Advanced PROTAC and quantitative proteomics strategy reveals Bax inhibitor-1 as a critical target of Icaritin in Burkitt lymphoma. Int J Mol Sci 2024;25:12944. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 106. Liongue C, Almohaisen FLJ, Ward AC. B cell lymphoma 6 (BCL6): a conserved regulator of immunity and beyond. Int J Mol Sci 2024;25:10968. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 107. Cardenas MG, Oswald E, Yu W, Xue F, MacKerell AD Jr, Melnick AM. The expanding role of the BCL6 oncoprotein as a cancer therapeutic target. Clin Cancer Res 2017;23:885–93. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 108. McLachlan T, Matthews WC, Jackson ER, Staudt DE, Douglas AM, Findlay IJ, et al. B-Cell lymphoma 6 (BCL6): from master regulator of humoral immunity to oncogenic driver in pediatric cancers. Mol Cancer Res 2022;20:1711–23. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 109. Wagner SD, Ahearne M, Ko Ferrigno P. The role of BCL6 in lymphomas and routes to therapy. Br J Haematol 2011;152:3–12. [DOI] [PubMed] [Google Scholar]
- 110. McCoull W, Cheung T, Anderson E, Barton P, Burgess J, Byth K, et al. Development of a novel B-cell lymphoma 6 (BCL6) PROTAC to provide insight into small molecule targeting of BCL6. ACS Chem Biol 2018;13:3131–41. [DOI] [PubMed] [Google Scholar]
- 111. Mi D, Li C, Li Y, Yao M, Li Y, Hong K, et al. Discovery of novel BCL6-Targeting PROTACs with effective antitumor activities against DLBCL in vitro and in vivo. Eur J Med Chem 2024;277:116789. [DOI] [PubMed] [Google Scholar]
- 112. Kerres N, Steurer S, Schlager S, Bader G, Berger H, Caligiuri M, et al. Chemically induced degradation of the oncogenic transcription factor BCL6. Cell Rep 2017;20:2860–75. [DOI] [PubMed] [Google Scholar]
- 113. Thangaraj K, Ponnusamy L, Natarajan SR, Manoharan R. MELK/MPK38 in cancer: from mechanistic aspects to therapeutic strategies. Drug Discov Today 2020;25:2161–73. [DOI] [PubMed] [Google Scholar]
- 114. McDonald IM, Graves LM. Enigmatic MELK: the controversy surrounding its complex role in cancer. J Biol Chem 2020;295:8195–203. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 115. Maes A, Maes K, Vlummens P, De Raeve H, Devin J, Szablewski V, et al. Maternal embryonic leucine zipper kinase is a novel target for diffuse large B cell lymphoma and mantle cell lymphoma. Blood Cancer J 2019;9:87. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 116. Ren L, Guo J-S, Li Y-H, Dong G, Li X-Y. Structural classification of MELK inhibitors and prospects for the treatment of tumor resistance: a review. Biomed Pharmacother 2022;156:113965. [DOI] [PubMed] [Google Scholar]
- 117. Zhou J-Y, Huang H, Zhuang Y, Zhong X-M. [Effect of MELK inhibitor OTSSP167 on diffuse large B-cell lymphoma]. Zhongguo Shi Yan Xue Ye Xue Za Zhi 2023;31:739–45. [DOI] [PubMed] [Google Scholar]
- 118. Sun Y, Liu X, He Q, Zhang N, Yan W, Lv X, et al. Discovery of first-in-class PROTACs targeting maternal embryonic leucine zipper kinase (MELK) for the treatment of Burkitt lymphoma. RSC Med Chem 2024;15:2351–6. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 119. Deevy O, Bracken AP. PRC2 functions in development and congenital disorders. Development 2019;146:dev181354. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 120. Laugesen A, Højfeldt JW, Helin K. Molecular mechanisms directing PRC2 recruitment and H3K27 methylation. Mol Cell 2019;74:8–18. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 121. Romero P, Richart L, Aflaki S, Petitalot A, Burton M, Michaud A, et al. EZH2 mutations in follicular lymphoma distort H3K27me3 profiles and alter transcriptional responses to PRC2 inhibition. Nat Commun 2024;15:3452. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 122. Liu Y, Yang Q. The roles of EZH2 in cancer and its inhibitors. Med Oncol 2023;40:167. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 123. Kim KH, Roberts CW. Targeting EZH2 in cancer. Nat Med 2016;22:128–34. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 124. Bisserier M, Wajapeyee N. Mechanisms of resistance to EZH2 inhibitors in diffuse large B-cell lymphomas. Blood 2018;131:2125–37. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 125. Potjewyd F, Turner A-MW, Beri J, Rectenwald JM, Norris-Drouin JL, Cholensky SH, et al. Degradation of Polycomb repressive complex 2 with an EED-targeted bivalent chemical degrader. Cell Chem Biol 2020;27:47–56.e15. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 126. Tu Y, Sun Y, Qiao S, Luo Y, Liu P, Jiang Z-X, et al. Design, synthesis, and evaluation of VHL-based EZH2 degraders to enhance therapeutic activity against lymphoma. J Med Chem 2021;64:10167–84. [DOI] [PubMed] [Google Scholar]
- 127. Scott DH, Arthur GR, Scott DB. Haemodynamic changes following buprenorphine and morphine. Anaesthesia 1980;35:957–61. [DOI] [PubMed] [Google Scholar]
- 128. Xie H, Xu W, Liang J, Liu Y, Zhuo C, Zou X, et al. Design, synthesis and evaluation of EZH2-based PROTACs targeting PRC2 complex in lymphoma. Bioorg Chem 2023;140:106762. [DOI] [PubMed] [Google Scholar]
- 129. Huang H. Anaplastic lymphoma kinase (ALK) receptor tyrosine kinase: a catalytic receptor with many faces. Int J Mol Sci 2018;19:3448. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 130. Cao Z, Gao Q, Fu M, Ni N, Pei Y, Ou W-B. Anaplastic lymphoma kinase fusions: roles in cancer and therapeutic perspectives. Oncol Lett 2019;17:2020–30. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 131. Rothenstein JM, Chooback N. ALK inhibitors, resistance development, clinical trials. Curr Oncol 2018;25(Suppl 1):S59–67. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 132. Poei D, Ali S, Ye S, Hsu R. ALK inhibitors in cancer: mechanisms of resistance and therapeutic management strategies. Cancer Drug Resist 2024;7:20. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 133. Zhang C, Han X-R, Yang X, Jiang B, Liu J, Xiong Y, et al. Proteolysis targeting chimeras (PROTACs) of anaplastic lymphoma kinase (ALK). Eur J Med Chem 2018;151:304–14. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 134. Kang CH, Lee DH, Lee CO, Du Ha J, Park CH, Hwang JY. Induced protein degradation of anaplastic lymphoma kinase (ALK) by proteolysis targeting chimera (PROTAC). Biochem Biophys Res Commun 2018;505:542–7. [DOI] [PubMed] [Google Scholar]
- 135. Zhou H., Hu M, Jie H, Li Y, Tang K, Pan L, et al. Discovery of orally bioavailable ALK PROTACs based ceritinib against ALK positive cancers. Eur J Med Chem 2024;279:116827. [DOI] [PubMed] [Google Scholar]
- 136. Kazandjian D. Multiple myeloma epidemiology and survival: a unique malignancy. Semin Oncol 2016;43:676–81. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 137. Medical Masterclass contributors; Firth J. Haematology: multiple myeloma. Clin Med (Lond) 2019;19:58–60. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 138. Kyle RA, Rajkumar SV. Multiple myeloma. Blood 2008;111:2962–72. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 139. Clarke SE, Fuller KA, Erber WN. Chromosomal defects in multiple myeloma. Blood Rev 2024;64:101168. [DOI] [PubMed] [Google Scholar]
- 140. Lu Q, Yang D, Li H, Niu T, Tong A. Multiple myeloma: signaling pathways and targeted therapy. Mol Biomed 2024;5:25. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 141. Wang S, Li Z, Ma S, Zhang S, Guo S, Ma Z, et al. Discovery of novel 20S proteasome subunit beta5 PROTAC degraders as potential therapeutics for pharyngeal carcinoma and Bortezomib-resistant multiple myeloma. Bioorg Chem 2024;153:107801. [DOI] [PubMed] [Google Scholar]
- 142. Lim S-L, Xu L, Han B-C, Shyamsunder P, Chng W-J, Koeffler HP. Multiple myeloma: combination therapy of BET proteolysis targeting chimeric molecule with CDK9 inhibitor. PLoS One 2020;15:e0232068. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 143. Khan S, Zhang X, Lv D, Zhang Q, He Y, Zhang P, et al. A selective BCL-X(L) PROTAC degrader achieves safe and potent antitumor activity. Nat Med 2019;25:1938–47. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 144. Champion O, Soler A, Maïga S, Bellanger C, Pellat-Deceunynck C, Talbot A, et al. BCLXL PROTAC degrader DT2216 targets secondary plasma cell leukemia addicted to BCLXL for survival. Front Oncol 2023;13:1196005. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 145. Zhang X, Lee HC, Shirazi F, Baladandayuthapani V, Lin H, Kuiatse I, et al. Protein targeting chimeric molecules specific for bromodomain and extra-terminal motif family proteins are active against pre-clinical models of multiple myeloma. Leukemia 2018;32:2224–39. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 146. Zhang X, Lu J, Qian Y, Orlowski RZ. Proteolytic targeting chimeric molecules (PROTACs) specific for bromodomain-containing protein (BRD) 4 are active against pre-clinical models of multiple myeloma. Blood 2015;126:917. [Google Scholar]
- 147. Nuñez Y, Vera S, Baeza V, Gonzalez-Pecchi V. NSD3 in cancer: unraveling methyltransferase-dependent and isoform-specific functions. Int J Mol Sci 2024;25:944. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 148. Rathert P. Structure, activity and function of the NSD3 protein lysine methyltransferase. Life (Basel) 2021;11:726. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 149. He L, Cao Y, Sun L. NSD family proteins: rising stars as therapeutic targets. Cell Insight 2024;3:100151. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 150. Xu C, Meng F, Park KS, Storey AJ, Gong W, Tsai YH, et al. A NSD3-targeted PROTAC suppresses NSD3 and cMyc oncogenic nodes in cancer cells. Cell Chem Biol 2022;29:386–97.e389. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 151. Bonilla B, Hengel SR, Grundy MK, Bernstein KA. RAD51 gene family structure and function. Annu Rev Genet 2020;54:25–46. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 152. Laurini E, Marson D, Fermeglia A, Aulic S, Fermeglia M, Pricl S. Role of Rad51 and DNA repair in cancer: a molecular perspective. Pharmacol Ther 2020;208:107492. [DOI] [PubMed] [Google Scholar]
- 153. Shammas MA, Shmookler Reis RJ, Koley H, Batchu RB, Li C, Munshi NC. Dysfunctional homologous recombination mediates genomic instability and progression in myeloma. Blood 2009;113:2290–7. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 154. Kim S, Hwang I, Kim YK, Kim DS, Choi YJ, Jeung EB. Treatment of dexamethasone and lenalidomide-resistant multiple myeloma via RAD51 degradation using PROTAC and synergistic effects with chemotherapy. J Physiol Pharmacol 2024;75 [Epub ahead of print]. [DOI] [PubMed] [Google Scholar]
- 155. Wang T, Donahoe PK. The immunophilin FKBP12: a molecular guardian of the TGF-beta family type I receptors. Front Biosci 2004;9:619–31. [DOI] [PubMed] [Google Scholar]
- 156. Lowery JW, Rosen V. The BMP pathway and its inhibitors in the skeleton. Physiol Rev 2018;98:2431–52. [DOI] [PubMed] [Google Scholar]
- 157. Quist-Løkken I, Andersson-Rusch C, Kastnes MH, Kolos JM, Jatzlau J, Hella H, et al. FKBP12 is a major regulator of ALK2 activity in multiple myeloma cells. Cell Commun Signal 2023;21:25. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 158. Quist-Lokken I, Tilseth M, Andersson-Rusch C, Hanif MA, Walz M, Moen JFN, et al. Novel PROTAC to target FKBP12: the potential to enhance bone morphogenetic protein activity and apoptosis in multiple myeloma. Haematologica 2025;110:2487–92. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 159. Thomas LW, Lam C, Edwards SW. Mcl-1; the molecular regulation of protein function. FEBS Lett 2010;584:2981–9. [DOI] [PubMed] [Google Scholar]
- 160. Le Gouill S, Podar K, Harousseau J-L, Anderson KC. Mcl-1 regulation and its role in multiple myeloma. Cell Cycle 2004;3:1259–62. [DOI] [PubMed] [Google Scholar]
- 161. Papatzimas JW, Gorobets E, Maity R, Muniyat MI, MacCallum JL, Neri P, et al. From inhibition to degradation: targeting the antiapoptotic protein myeloid cell leukemia 1 (MCL1). J Med Chem 2019;62:5522–40. [DOI] [PubMed] [Google Scholar]



