Abstract
Two series of 1,2,3‐triazole‐based molecules were synthesized. Their physical properties were documented, and cytotoxicity was evaluated against normal lymphocytes, leukemic, adherent, and nontumor cell lines. Compounds 11, 15, and 16 were inactive, while compound 17 affected both normal and cancer cells. Compounds 18 and 20 showed activity against BJ and A549 cell lines, with compound 20 being selective for T‐cell leukemias and compound 18 moderately affecting B‐cell leukemia. Compound 12 specifically affected the HCTp53 KO cell line, while compounds 13 and 14 were selective for U2O2 and HCT116 cell lines, respectively. Compound 14 was highly specific for T‐cell leukemia, whereas compound 19 was specific for A549 and moderately specific for B‐cell lines. Compound 22 affected all tumor cell lines except A549. The active compound induces apoptosis since it activates caspase 3. Spheroid testing revealed that compounds 13 and 22 specifically affected HCT116 spheroids, while compound 19 affected A549 spheroids. Both in vitro and computational analyses demonstrated that compounds 11, 12, and 13 exhibit high affinity for the A Cα subunit of protein kinase A. This suggests a kinase‐targeted mechanism of action, providing a structural foundation for future design strategies to optimize the potency of these lead compounds.
Keywords: click chemistry, molecular docking, natural scaffolds, protein kinase A, quinoline, spheroids, tumor cell lines
Compound 13 affected all tumor cell lines except A549. The active compound induces apoptosis since it activates caspase 3. In vitro assays and computational molecular docking identified compound 13 as binders to the protein kinase A Cα‐subunit. This suggests a kinase‐targeted mechanism of action.

1. Introduction
Cancer is defined as a severe disease caused by the uncontrolled growth of cells, leading to tissue destruction and death. It is the second leading cause of death worldwide. Current global statistics for 2022 indicate that there were almost 20 million new cases of cancer and close to 10 million cancer deaths. Demographic predictions suggest that the diagnosis of new cancer cases will reach 35 million by 2050, a 77% increase from the 2022 level [1]. Cancer is a multifaceted disease, and the efficacy of treatment strategies such as surgery, radiotherapy, and chemotherapy is often limited, varying according to the specific stage and type of cancer. Nonetheless, advancements in cancer treatments have occurred over several decades. Contemporary approaches integrate chemotherapeutic regimens with targeted drug delivery, personalized medicine, and immunotherapy, thereby enhancing treatment outcomes. This approach not only improves the efficacy of the enrolled treatment but can also enhance the responsiveness of certain tumors to effective therapeutic targeting in clinical settings [2].
A valuable approach to developing novel drugs involves assembling hybrid molecules with dual modes of action [3, 4, 5, 6, 7, 8]. Another approach is the superimposition of structural features responsible for the activity of different chemotherapeutic agents within a single molecular scaffold [9, 10, 11]. In this context, we report advances in research on small hybrid molecules as potential candidates against cancer based on in silico and in vitro data reported in the literature to date. Molecular hybridization is a well‐established strategy in drug discovery for developing multitarget drug candidates for complex diseases. It consists of the conjugation of two or more pharmacophore units via covalent bonds, resulting in a single molecule that targets multiple pathways and exhibits improved pharmacological and pharmacokinetic profiles compared to the parent pharmacophores used alone or in combination. The hybridization of two active molecules can be achieved in different ways: merged and fused hybrids are obtained by using functional groups initially present on the combination partners, while the introduction of a linker unit, not present in either of the starting pharmacophores, leads to linked hybrids.
Nitrogen‐containing heterocyclic compounds are fundamental constituents in many biologically active compounds. The quinoline core and its derivatives represent a significant class of compounds that possess considerable biological importance within the realm of heterocycles. Numerous libraries of quinoline derivatives have been documented, showcasing their notable biological properties. These properties include antibacterial, antifungal, antiviral, antiprotozoal, antimalarial, anti‐inflammatory, and anticancer activities [12, 13]. Inspired by the significance of incorporating 1,2,3‐triazole functionality into natural scaffolds and in continuation of our search for potent chemotherapeutic agents, we utilized hydroxyl‐containing natural bioactive precursors such as eugenol (Eugenia caryophyllata), paenol (Paeonia suffruticosa), thymol (Thymus vulgaris), vanillin (Vanilla planifolia), 4‐hydroxybenzaldehyde (Gastrodia elata, V. planifolia), and the compound 3,5‐dimethoxy‐4‐hydroxybenzaldehyde, a synthetic aldehyde, for hybridization purposes. These compounds exhibit versatility and have shown significant efficacy in addressing a wide range of infectious diseases, including bacterial, fungal, protozoal, and viral infections, as well as in anticancer, anti‐inflammatory, antituberculosis, antitussive, digestive, carminative, and antispasmodic applications [14, 15, 16, 17]. Additionally, the 1,2,3‐triazole nucleus is found in several drugs available in the pharmaceutical market or as candidates, such as carboxyamidotriazole, rufinamide, cefatrizine, tazobactam, radezolid, volitinib, seviteronel, molidustat, and TSAO (Figure 1) [18, 19].
FIGURE 1.

FDA‐approved drugs or drug candidates containing a 1,2,3‐triazole scaffold.
The development of cancer treatment strategies targeting protein kinases has been a focus since the 1980s [20]. Protein kinases are one of the most prominent gene families encoded by the human genome. By catalyzing the transfer of the γ‐phosphate from ATP to specific target biomolecules, this family of proteins plays a crucial regulatory role in almost every biological process and pathway, including cell division, cell death, growth, differentiation, metabolism, and memory [21, 22]. cAMP‐dependent protein kinase, also known as protein kinase A (PKA), is considered the archetypal enzyme within this diverse family of proteins, because its structure and catalytic mechanism are very well‐studied and provide a model for understanding how all kinases function and are regulated. PKA consists of a complex of two regulatory (R) and two catalytic (C) subunits. Mammals have four R‐subunit isoforms (RIα, RIβ, RIIα, and RIIβ) and three catalytic subunit isoforms (Cα, Cβ, and Cγ). The enzyme is inactive in its holoenzyme form; however, when cAMP is present, the holoenzyme dissociates, releasing enzymatically active C subunits for signaling. In normal mammalian cells, PKA is strictly intracellular. Still, cancer cells of various types secrete PKA into the conditioned medium [23, 24, 25, 26], making PKA a potential biomarker for cancer detection and a promising therapeutic target [22, 27].
Prompted by these observations and in continuation of our efforts to develop structurally diverse organic scaffolds [28, 29, 30], we designed and synthesized a new series of 1,2,3‐triazole derivatives from biologically active natural scaffolds. To this end, we employed a well‐known, robust, reliable, and efficient copper(I)‐catalyzed version of the azide–alkyne cycloaddition reaction, known as the “Click Chemistry” approach developed by Sharpless [31]. The primary motivation for this synthesis was the diverse bioactivities these compounds possess individually, and the study of their anticancer effect after conversion into hybrids linked through the 1,2,3‐triazole nucleus. To elucidate the possible mechanisms of the antiproliferative activities of the investigated compounds, the isoform α of the catalytic subunit of PKA (Cα) was used. A molecular docking study of the apoenzyme structure of the Mus musculus PKA catalytic subunit was performed to analyze the recorded inhibitory effect.
2. Results and Discussion
2.1. Chemistry
The synthesis of 4‐aminoquinoline‐based precursors involved an initial heating of 4,7‐dichloroquinoline with sodium azide in dry DMF to yield 9. In contrast, a sequence of nucleophilic aromatic substitution with amino ethanol, followed by chlorination and azidation, yielded 10. Eugenol was obtained by hydrodistillation of cloves purchased at the local market in Caracas, Venezuela. After extraction, the compound was purified by column chromatography on silica gel. Subsequently, eugenol, along with vanillin, paenol, thymol, 4‐hydroxybenzaldehyde, and commercially available 3,5‐dimethoxy‐4‐hydroxybenzaldehyde, was propargylated with propargyl bromide and potassium carbonate in dry acetone to yield the corresponding alkyne (3−8).
Finally, azide (9,10) and alkyne (3−8) derivatives underwent Cu(I)‐catalyzed [3 + 2] cycloaddition reaction in the presence of a catalytic amount of CuSO4 · 5H2O and sodium ascorbate in ter t‐BuOH/H2O (1:1) mixture for 12 h to yield the title compounds (11−22) (Scheme 1). The crude obtained was purified by silica gel chromatography eluted with dichloromethane (DCM): methanol (9.5:0.5 v/v) to provide the compounds (11−22) in good to excellent yields. FT‐IR, 1H and 13C NMR, Attached proton test (APT), COSY, HSQC‐ME, mass spectrometry, and elemental analysis confirmed the proposed structures.
SCHEME 1.

Synthesis of 1,2,3‐triazole derivatives 11−22. (i) K2CO3, acetone, 60–65 °C. (ii) tert‐BuOH : H2O (1:1), sodium ascorbate, CuSO4·5H2O.
In the IR spectra of all the compounds (11−22), the primary evidence for their formation came from the disappearance of the absorption band at 2124 cm−1 corresponding to azido functionality indicating that azide had been completely consumed in the reaction and the peak corresponding to alkyne (=C≡CH), which appeared in the range 3227−3292 cm−1 was also absent from their spectra. All the synthesized compounds (11−22) gave characteristic peak of triazole ring in the region 2952−3149 cm−1 as broad absorption bands and the band corresponding to the NH group for compounds 17−22 in the region 3316−3351 cm−1. All the other absorption bands also appeared at the expected regions (Supporting Information).
In the 1H NMR spectra, these compounds showed a singlet in the region δ 7.70−8.24 ppm assigned to H5´´ of the triazole ring, thus confirming its formation. The characteristic singlets at δ 5.10−5.59 ppm were also observed for OCH2 protons of triazole derivatives (11−22). While the triplet corresponding to ≡CH group, which appeared in the region δ 2.49−2.96 ppm was absent from the spectra. In general, the 1H NMR spectrum showed the five quinoline protons at 6.42−9.12 ppm and the aliphatic protons at 3.90−1.02 ppm. The triazole ring was further reconfirmed by 13C NMR spectral data in which both the carbons of triazole ring appeared in the ranges 120.2−127.3 and δ 138.3−145.9 ppm. The carbon signals of OCH2 were resonated at δ 62.2−65.2 ppm, while all the other carbons gave peaks at their expected values (Supporting Information).
The mass spectra confirmed the formation of all final products (11−22). The EI‐MS spectra of compounds 12−22 displayed molecular ion peaks with very low intensity, and the base peak (100% abundance) corresponded to C12H8N4; however, for compound 11, the base peak corresponded to (M ‐ C2H3). Some of the compounds showed a [M ‐ CHO] peak in the mass spectra, with varying relative intensities (Supporting Information).
2.2. Biology
Cytotoxic activity was assessed using the MTS assay after 72 h of incubation. The IC50 value is the concentration of a compound required to kill 50% of cells. Typically, the standard deviation in cytotoxicity assays is up to 20% of the mean. Compounds with an IC50 greater than 50 μM are considered inactive. All compounds were inactive against fresh human lymphocytes, with IC50 values >50 μM.
Except for compound 11, the remaining compounds showed some activity against leukemia cells of different origins (Table 1). Compound 12 induced cytotoxicity only in the CCRF‐CEM cell line. Compounds 13, 17, and 22 were more effective against the leukemic cell lines Raji and Ramos, as shown in Table 1. The differences in IC50 values for compounds 13, 17, and 22, as measured in cell lines BJ, BJLD (doxorubicin‐resistant), MRC‐5, and MRC‐5LD (doxorubicin‐resistant), as well as in lymphocytic cell lines Raji and Ramos, were statistically significant (p < 0.01). However, these differences were not statistically significant when compared to the JURKAT E 6.1, MOLT‐4, CCRF‐CEM, and K562 cell lines. Compounds 14 and 20 are specific for T leukemia cell lines, while compounds 18 and 19 affect both B cell lines and the CCRF‐CEM cell line. Compounds 15 and 16 did not affect the viability of leukemic cells.
TABLE 1.
Cytotoxic effect of 7‐chloro‐(1,2,3‐triazol)quinoline derivatives 11–14, 17–22 after 72 h of incubation on leukemic cells.
| No | Human leukemia cell lines | |||||
|---|---|---|---|---|---|---|
| RAJI | RAMOS | JURKAT E 6.1 | MOLT‐4 | CCRF‐CEM | K562 | |
| 11 | >50 | >50 | >50 | >50 | >50 | >50 |
| 12 | >50 | >50 | >50 | >50 | 18.7 | >50 |
| 13 | 5.2 ± 0.71 | 2.1 ± 0.33 | 19.6 ± 0.95 | 25.8 ± 1.33 | 18.66 ± 0.88 | 32.2 ± 2.68 |
| 14 | >50 | >50 | 15.8 | 25.6 | 20.15 | >50 |
| 15 | >50 | >50 | >50 | >50 | >50 | >50 |
| 16 | >50 | >50 | >50 | >50 | >50 | >50 |
| 17 | 8.9 ± 0.35 | 5.6 ± 0.42 | 15.9 ± 1.16 | 20.4 ± 2.20 | 11.27 ± 0.74 | 13.78 ± 0.54 |
| 18 | 42.6 ± 3.2 | 35.6 ± 2.26 | >50 | >50 | 37.68 ± 1.88 | >50 |
| 19 | 40.5 ± 2.65 | 38.2 ± 3.31 | >50 | >50 | 36.0 ± 2.76 | >50 |
| 20 | >50 | >50 | 22.5 ± 1.95 | 20.8 ± 1.76 | 25.96 ± 2.38 | >50 |
| 22 | 8.6 ± 0.94 | 3.9 ± 0.74 | 10.6 ± 1.31 | 19.6 ± 1.82 | 17.96 ± 1.60 | 31.19 ± 0.85 |
| CisPt | 0.68 ± 0.12 | 0.56 ± 0.08 | 1.1 ± 0.10 | 0.9 ± 0.09 | 4.62 ± 0.15 | 6.98 ± 0.63 |
| Das | 19.3 ± 0.32 | 16.8 ± 0.57 | 0.1 ± 0.03 | 1.2 ± 0.13 | 0.03 ± 0.02 | 0.005 ± 0.0.03 |
| Sora | 10.5 ± 0.94 | 7.9 ± 0.74 | 6.5 ± 0.32 | 13.5 ± 0.83 | 0.19 ± 0.12 | 5.9 ± 0.45 |
| Quer | 34.2 ± 3.22 | 48.9 ± 4.56 | 25.6 ± 4.32 | 35.6 ± 5.83 | 22.3 ± 1.72 | 40.7 ± 5.9 |
| Fosf | 2.1 ± 0.15 | 0.3 ± 0.11 | 45.3 ± 2.73 | 44.3 ± 6.15 | 32.3 ± 3.22 | 12.3 ± 2.83 |
Note: The table presents the median ± SD of IC50 values calculated at μM concentrations for six different assays using Dotmatics software. The standard error of the five assays was 10% or lower for each cell line assayed. When no cytotoxic effect was observed at the highest concentration, the IC50 was calculated to be greater than 50 μM. CisPt = cisplatin, Das = dasatinib, Sora = sorafenib, Quer = quercetin, and Fos = Fosfatinib were used as a control. RAJI and RAMOS are derived from B‐cell leukemia; JURKAT E6.1, MOLT‐4, and CCRF‐CEM are derived from T‐cell leukemias. K562 is a cell line derived from a patient with Chronic Myelogenous Leukemia.
Compounds 13, 14, 17, and 22 also affected the viability of colon, lung, and osteosarcoma cell lines, with IC50 values below 40 μM under standard 2D conditions (Table 2). There were statistically significant differences in IC50 values between the lymphocytic leukemia cell lines (Raji and Ramos) and the HCT116 cell line and its p53‐knockdown counterpart, HCT116p53−/−parental, as well as the A549 or U2O2 cell lines. The results obtained with compounds 13 and 22 differ significantly between HCT and U2OS cell lines and between the normal BJ, BJLD, MRC‐5, and MRC‐5LD cell lines (p < 0.01). However, compound 17 did not show a statistically significant difference in the cell lines tested (Tables 2 and 3). Compounds 17–20 were active against the lung adenocarcinoma cell line A549. No specificity was detected for compound 17. Compounds 18, 19, and 20 were selective for the A549 cell line (Table 2); however, their effects differed significantly (p < 0.01) across the other affected cell lines. Compound 19 had the highest selectivity for the A549 cell line; it did not affect normal fibroblasts and induced moderate cytotoxicity against leukemia cell lines. This compound is highly specific. Compound 18 shows results similar to those of compound 20; both affect BJ cell lines. On the other hand, compound 20 is specific for T‐cell leukemias, whereas compound 18 moderately affects B‐cell lines and one T‐lymphocyte cell line; it is less specific. Derivatives 11, 12, 14, 18, 19, and 20 were inactive against the human osteosarcoma cell line U2O2. Structures 15 and 16 did not affect the viability of any tumor cell lines (Tables 1 and 2) and nontumoral cell lines (Table 3).
TABLE 2.
Cytotoxic effect of 7‐chloro‐(1,2,3‐triazol)quinoline derivatives 11–14, 17–20 after 72 h of incubation with different human fibroblast cultures.
| Human tumors 2D | ||||
|---|---|---|---|---|
| No | HCT116 | HCT116p53−/− | A549 | U2O2 |
| 11 | >50 | >50 | >50 | >50 |
| 12 | >50 | 36.23 ± 1.23 | >50 | >50 |
| 13 | 26.15 ± 2.21 | 21.34 ± 1.88 | >50 | 34.27 ± 1.98 |
| 14 | 33.83 ± 1.74 | 36.85 ± 2.33 | >50 | >50 |
| 15 | >50 | >50 | >50 | >50 |
| 16 | >50 | >50 | >50 | >50 |
| 17 | 24.58 ± 2.12 | 22.37 ± 1.11 | 28.53 ± 1.33 | 22.2 ± 2.56 |
| 18 | >50 | >50 | 25.82 ± 1.52 | >50 |
| 19 | >50 | >50 | 12.39 ± 1.16 | >50 |
| 20 | >50 | >50 | 26.25 ± 2.13 | >50 |
| 22 | 35.57 ± 3.17 | 33.85 ± 4.92 | >50 | 31.34 ± 3.45 |
| CisPt | 12.52 ± 0.6 | 8.34 ± 0.35 | 9.51 ± 1.72 | 9.56 ± 0.85 |
| Das | 0.9 ± 0.3 | 3.1 ± 0.52 | 2.6 ± 2.1 | 2.9 ± 1.8 |
| Sora | 15.8 ± 0.91 | 9.8 ± 0.16 | 11.6 ± 1.30 | 10.8 ± 0.63 |
| Quer | 39.5 ± 2.32 | >50 | 15.3 ± 1.24 | >50 |
| Fosf | 35.2 ± 1.3 | >50 | >50 | 21.2 ± 3.9 |
Note: The table presents the median ± SD of IC50 values calculated at μM concentrations for six different assays using Dotmatics software. The standard error of the five assays was 10% or lower for each cell line assayed. When no cytotoxic effect was observed at the highest concentration tested, the IC50 was calculated to be greater than 50 μM. CisPt = cisplatin, Das = dasatinib, Sora = sorafenib, Quer = quercetin, and Fos = Fosfatinib were used as a control. HCT116 cell lines are epithelial cells from colon carcinoma, A549 are apithelial cells derived from lung cancer, and U2O2 are cells derived from osteosarcoma.
TABLE 3.
Cytotoxic effect of 7‐chloro‐(1,2,3‐triazol)quinoline derivatives 11–14, 17–22 after 72 h of incubation with different human fibroblast cultures.
| Human fibroblast | ||||
|---|---|---|---|---|
| No | BJ | BJ LD | MRC‐5 | MRC‐5 LD |
| 11 | >50 | >50 | >50 | >50 |
| 12 | >50 | >50 | >50 | >50 |
| 13 | >50 | >50 | >50 | >50 |
| 14 | >50 | >50 | >50 | >50 |
| 15 | >50 | >50 | >50 | >50 |
| 16 | >50 | >50 | >50 | >50 |
| 17 | 27.6 ± 1.76 | 27.01 ± 1.92 | 21.41 ± 2.35 | 22.3 ± 1.78 |
| 18 | 31.79 ± 1.33 | 17.43 ± 1.22 | >50 | >50 |
| 19 | >50 | >50 | >50 | >50 |
| 20 | 30.26 ± 1.05 | 8.43 ± 0.77 | >50 | >50 |
| 22 | >50 | >50 | >50 | >50 |
| CisPt | 9.5 ± 0.31 | 17.8 ± 0.83 | 3.98 ± 0.35 | 23.5 ± 0.43 |
| Das | >50 | >50 | 8.6 ± 0.61 | 15.8 ± 0.52 |
| Sofer | >50 | >50 | 47.8 ± 2.21 | >50 |
| Quer | >50 | >50 | >50 | >50 |
| Fosf | 48.9 ± 2.72 | >50 | >50 | >50 |
Note: The table presents the median IC50 values calculated at μM concentrations for five different assays using Dotmatics software. The standard error of the five assays was 10% or lower for each cell line assayed. When no cytotoxic effect was observed at the highest concentration tested, the IC50 was calculated to be greater than 50 μM. CisPt = cisplatin, Das = dasatinib, Sora = soferamid, Quer = quercetin, and Fos = Fosfatinib were used as a control. BJ cells are human fibroblasts isolated from the foreskin of a healthy newborn male. The MRC‐5 cell line is derived from normal lung tissue of a 14‐week‐old Caucasian male fetus. The BJ‐LD and MRC‐5 LD cell lines are doxorubicin‐resistant.
The effects of the compounds and controls on the viability of spheroids from HCT116, HCT116 TP53−/−, and A549 are represented in (Tables 4 and 5). Even though the IC50 could not be reached at the tested concentrations, differences between HCT116 and HCT116 TP53−/− were evident in the A549 cell line. The compounds did not affect spheroids generated from the fibroblast cell lines BJ or MRC5 (IC50 > 50 μM). Compound 19, as in 2D cell cultures, affected A549 spheroids, although the effect was observed only at the highest concentration. Compounds 13 and 22, which had moderate effects in 2D cultures of HCT116 cells, also showed similar effects in spheroid cultures.
TABLE 4.
Effect of the compounds on spheroids. Percent of ATP released.
| No | HCT116 | HCT116 TP53−/− | A549 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| 10, μM | 25, μM | 50, μM | 10, μM | 25, μM | 50, μM | 10, μM | 25, μM | 50, μM | |
| 13 | 8.3 ± 1.6 | 20.0 ± 3.8 | 44.9 ± 2.2 | 12.3 ± 2.5 | 24.5 ± 3.6 | 31.2 ± 1.3 | 0 | 0 | 0 |
| 19 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 10.3 ± 0.9 |
| 22 | 8.5 ± 1.3 | 19.8 ± 2.2 | 35.5 ± 4.5 | 6.3 ± 1.5 | 15.5 ± 1.3 | 30.8 ± 2.7 | 0 | 0 | 0 |
Note: The values represent the percentage of ATP released from spheroids after 72 h of treatment, relative to nontreated controls. The IC50 for cisplatin was 14.8, 43.5, and 49.1 μM for the cell lines HCT116, HCT116 TP53−/−, and A549, respectively.
TABLE 5.
Controls of the assay IC50 in μM.
| HCT116 | HCT116 TP53−/− | A549 | |
|---|---|---|---|
| CisPt | 14.8 ± 1.2 | 43.5 ± 3.44 | 49.1 ± 5.8 |
| Das | 29.5 ± 3.9 | 47.6 ± 4.12 | >50 |
| Sora | 15.8 ± 1.3 | 22.3 ± 1.8 | 11.2 ± 0.3 |
| Quer | >50 | >50 | >50 |
| Fosf | >50 | >50 | >50 |
Note: The IC50 for cisplatin was 14.8 ± 1.2, 43.5 ± 3.44, and 49.1 ± 5.8 μM for the cell lines HCT116, HCT116 TP53−/−, and A549, respectively.
In another set of experiments, compounds 13, 19, and 22 did not affect U2OS spheroids (p > 50 μM).
2.2.1. Apoptosis Quantification Using Cleaved Caspase‐3 (Asp175) ELISA Assay
The results in Figure 2 confirm the compounds’ ability to induce apoptosis in the different cell lines. It is clear that the process does not involve any other mechanism.
FIGURE 2.

Illustrates the effect of the different compounds on the activation of caspase 3, a critical marker in apoptosis, using the (Asp175) ELISA assay. (A) The effect of all the compounds (n = 6) on the (B) cell leukemia cell line Raji, the T cell CCRF‐CEM, and the K562 cell line. The concentration of the compound was 25 µM. The treatment was for 12 h. (B) The positive controls at the IC50 concentrations expressed in Table 2. (C) The effect of 25 µM of each compound on adherent tumor cell lines (n = 6). The compounds 11, 15, and 16 were not represented. (D) The positive controls at the IC50 calculated. The treatment was for 12 h.
2.2.2. Inhibition of PKA
Mouse PKA Cα‐subunit was expressed in bacteria and purified to homogeneity by column chromatography through CM Sepharose. The elution profile of the protein after applying a linear salt gradient is illustrated in Figure 3A. The recombinant Cα subunit corresponded to a polypeptide band migrating with an apparent molecular mass of ∼40 kDa on sodium dodecyl sulfate‐polyacrylamide gel electrophoresis (SDS‐PAGE) (Figure 3B).
FIGURE 3.

Purification of the recombinant M. musculus PKA Cα‐subunit. (A) Mouse PKA Cα‐subunit was purified to homogeneity on a CM Sepharose column. The elution profile was monitored at 280 nm. (B) The resulting fractions were examined by SDS‐PAGE, and the various lanes illustrate the polypeptide content of the corresponding column fractions. The arrow indicates the migration and apparent molecular mass of the purified protein. (C) Kinase activity was measured using an electrophoretic agarose gel‐shift assay using fluorescently labeled kemptide. Shown is the result obtained when the purified PKA catalytic subunit was included in the reaction mixture (C+). The reaction mixture without any added enzyme was used as a negative control (C−). The arrowhead and arrow indicate the nonphosphorylated and phosphorylated peptide, respectively. Phosphorylated kemptide migrated toward the positive electrode (+), while nonphosphorylated kemptide migrated toward the negative electrode (−).
Kinase activity of the purified protein was determined using an electrophoretic gel‐shift nonradioactive assay. The phosphorylated and nonphosphorylated fluorescently labeled kemptide bands were easily separated by electrophoresis on an agarose gel (Figure 3C).
Initially, the enzymatic activity of the purified PKA Cα‐subunit was evaluated following incubation with a fixed concentration of the synthesized compounds (10 μM). The table in Figure 4A qualitatively summarizes the compounds’ effects on the protein's ATP: phosphotransferase activity. Compounds 11 and 13 possessed the highest inhibitory effect (+++), whereas compound 12 showed an intermediate inhibitory effect (++, Figure 4A. Additionally, compounds 14, 15, 20, and 21 had little inhibitory effect (+, Figure 4A), whereas the remaining compounds (17, 18, 19, and 22) had no effect (−, Figure 4A).
FIGURE 4.

Effect of the synthesized Click compounds on the enzymatic activity of the PKA Cα‐subunit. (A) Kinase activity of the purified PKA Cα‐subunit following incubation with 10 μM of the new series of 1,2,3‐triazole hybrids. Positive inhibitory reactions were qualitatively classified with one cross (+), two crosses (++), or three crosses (+++). No inhibitory effect was indicated by a negative sign (−). (B) Inhibition of the enzymatic activity of the PKA Cα‐subunit after incubation with 10 μM of 11, 12, 13, and 14. Reaction mixtures were separated by electrophoresis on a 1% agarose gel, and the gel was visualized under a phototransilluminator using UV light. The arrowhead and arrow indicate the nonphosphorylated and phosphorylated fluorescently labeled kemptide, respectively. (C) and (D) Dose‐dependent inhibition of the PKA Cα‐subunit following addition of increasing concentrations of compounds 11 and 13, respectively. The relative intensity of the phosphorylated kemptide band (%) was plotted against the concentration of each compound.
Here, we focus on compounds 11, 12, 13, and 14, as they share a similar quinoline–triazole core. Figure 4B illustrates the inhibition obtained on the enzymatic activity of the PKA Cα‐subunit when the protein was incubated with 10 μM of 11, 12, 13, and 14. The electrophoretic gel‐shift kinase assay clearly showed that 11 and 13 were potent inhibitors, whereas 12 and 14 were intermediate and low inhibitors, respectively (Figure 4B).
Based on these preliminary findings, increasing concentrations of 11 and 13 (0 to 10 μM) were added to the recombinant PKA Cα‐subunit, and its remaining kinase activity was measured. After densitometric quantitation, dose‐dependent inhibition of the enzyme was detected (Figure 4C), with IC50 values of 2.05 ± 1.58 and 6.80 ± 2.35 μM for 11 and 13, respectively. The order of effectiveness of the four compounds as PKA Cα‐subunit inhibitors was 11 > 13 > 12 >> 14.
To evaluate whether MgATP protected against the inhibition of the enzyme by these reagents, the PKA Cα subunit was preincubated with the nucleotide before the addition of the compounds to the protein. Interestingly, preincubation of the protein with MgATP completely protected against the inhibitory effect of all four compounds (data not shown). These results strongly suggest that these reagents bind to the enzyme's MgATP‐binding pocket.
The determination of the crystal structure of the PKA Cα subunit [32, 33] showed that the protein core is bilobal. Although the ATP‐binding site is mainly situated in the N‐terminal lobe, the ATP‐binding pocket spans both lobes, since the nucleotide molecule is located in the cleft between the two domains. Figure 5 shows the residues of the PKA Cα subunit that participate in ATP binding on the basis of the low‐ and room‐temperature 3D X‐ray structures of ternary complexes solved in the presence of high Mg2+, ATP, and the inhibitory peptide IP20 (sequence = TTYADFIASGRTGRRNAIHD), a 20‐residue peptide derived from the heat‐stable inhibitor PKIα [34]. The ATP‐binding site shows the intricate network of hydrogen bonds and electrostatic interactions that buries the nucleotide within the protein. Amino acids in the glycine‐rich loop (G‐loop, residues 40–64) embrace the adenine ring of the molecule and help to secure it at the base of the cleft as well as to position the γ‐phosphate for transfer to a protein substrate. Various residues, such as Leu 49, Val 57, Ala 70, Met 120, Val 123, Leu 173, and Thr 183 (among others), have been identified to interact with the nucleotide base and generate an expanded hydrophobic shell that surrounds the ATP and defines the entropy‐driven allostery that drives the phosphoryl transfer mechanism. Other crucial residues are Lys 72, which plays a fundamental role in ATP binding, enzyme stability, and catalytic activity, and Asp 184 in the DFG motif, which, besides playing an essential role in enzyme catalysis and active site structure, binds to the second metal ion in the ATP complex (not shown in Figure 5).
FIGURE 5.

A close‐up view of the ATP binding site in the X‐ray structure of the PKA Cα subunit solved with high Mg2+, ATP, and IP20 (PDB code: 4DH3). The adenine is located in a hydrophobic pocket, and hydrogen bonds stabilize the ribose. The phosphates of ATP are aligned for catalysis by interactions with the main chain nitrogens of the glycine‐rich loop, by interactions with Lys 72, and by interactions with Mg2+ ions (not shown). Residues are denoted by using the three‐letter abbreviations for the standard amino acids with their corresponding position in the sequence.
Comparative analysis of the molecular docking results revealed distinct binding modes among compounds 11–14. Compounds 11–13 (Figure 6A–C) interacted predominantly with residues that constitute the canonical ATP‐binding pocket of PKA, including Lys72, Leu49, Phe54, Leu74, Met120, and Val57, which are well recognized as key contributors to kinase inhibitor binding. Some of the primary residues participating in the binding of ligands 11–13 comprise amino acids in the G‐loop, like L49, F54, G55, and V57 (Figure 6A–C). Since these residues are known to be involved in the correct positioning of the ATP phosphate groups, our docking results denote conserved interaction hotspots within the protein ATP‐binding site. The extensive network of hydrophobic, π‐mediated, and electrostatic interactions established with these conserved residues is likely to promote stable ligand accommodation within the active site, thereby favoring PKA inhibition. In contrast, compound 14 (Figure 6D) exhibited a notably different interaction profile, with its binding mode shifted toward residues Asp175, Glu121, and Tyr306, suggesting an altered orientation of the ligand within the ATP‐binding pocket. This change in binding orientation, together with the absence of additional favorable interactions with the canonical ATP‐binding residues and the presence of an unfavorable acceptor–acceptor interaction involving Asp175, may reduce ligand–protein complementarity and compromise complex stability. More specifically, compound 11 exhibited the most favorable docking score (−8.4), suggesting a strong affinity for the PKA catalytic subunit. This result is consistent with the highest inhibition profile obtained for compound 11 (Figure 4). In contrast, compound 14, bearing a 3,4‐dimethoxy‐substituted aromatic ring, exhibited the highest docking score (−7.2), and the weakest inhibitory activity against PKA (Figure 4), despite forming several hydrophobic and π‐mediated interactions with the ATP molecule. Molecular docking analysis of compound 14 revealed π‐anion interactions with Asp175 and Glu121, π‐alkyl contacts with Val123 and Pro101, and a conventional hydrogen bond with Tyr306. However, an unfavorable acceptor–acceptor interaction involving Asp175 was also observed, which might compromise the stability of the ligand–protein complex. Notably, the introduction of a second methoxy substituent increases the steric demand of the aromatic ring, which may induce a less favorable orientation of the aromatic moiety, impairing the optimal accommodation of the quinoline–triazole scaffold within the active site, a phenomenon frequently associated with reduced ligand–protein complementarity and binding affinity [35]. Consequently, the absence of additional stabilizing interactions, together with the unfavorable electrostatic contact, may contribute to the reduced binding affinity predicted by molecular docking and is consistent with the experimentally observed weak PKA inhibitory activity of compound 14. Summarizing, docking studies have confirmed that residues involved in the MgATP‐binding site of the PKA Cα‐subunit also participate in the binding of the synthesized Click compounds to the protein (Figure 6). The presence of significant interactions suggests that these ligands may stabilize the protein in a state that hinders ATP binding or catalytic activity.
FIGURE 6.

Molecular docking of compounds 11, 12, 13, and 14 to the PKA Cα‐subunit. Shown are computational predictions of how the four Click compounds, 11 (A), 12 (B), 13 (C), and 14 (D), fit into the ATP binding site of the PKA Cα‐subunit. Shown are 2D molecular interactions of each of the four compounds with critical residues that participate in the binding of ATP in the protein. Residues are denoted by using the three‐letter abbreviations for the standard amino acids with their corresponding position in the sequence. Interactions were displayed as color‐coded dashed lines. Docking scores were −8.4, −8.0, −8.2, and −7.2 for compounds 11, 12, 13, and 14, respectively. Each score represents the binding affinity or stability of the protein–compound complex, estimated by minimizing the system's free energy.
The reliability of the molecular docking protocol was evaluated through independent redocking of two cocrystallized PKA inhibitors: staurosporine (STU) (PDB ID: 1STC [36]) and BLU0588 (PDB ID: 9PC1) [37]. As shown in Figure 7, Panel I, the redocked STU pose accurately reproduced the crystallographic binding orientation within the ATP‐binding pocket, maintaining the key interactions observed experimentally. Superposition of the crystallographic and predicted poses yielded an root–mean‐square deviation (RMSD) of 1.9 Å for 28 heavy atoms, indicating successful reproduction of the experimental binding mode. Moreover, redocking of BLU0588 resulted in excellent agreement with its crystallographic conformation (Figure 7, Panel II). The predicted pose maintained the overall orientation and interaction pattern within the active site and exhibited an RMSD of 0.80 Å for 32 heavy atoms, demonstrating an even closer correspondence between the experimental and the predicted structures. The docking protocol used for compounds 11–14 appeared to be suitable, since RMSD values below 2.0 Å are generally considered indicative of successful reproduction of the experimental binding mode [38].
FIGURE 7.

Validation of the molecular docking protocol by redocking two cocrystallized inhibitors of the PKA Cα‐subunit, staurosporine (STU) from PDB ID: 1STC and BLU0588 from PDB ID: 9PC1. Panel I: (A) crystallographic binding pose of STU within the PKA Cα‐subunit active site; (B) binding pose of STU obtained by redocking using AutoDock Vina; and (C) superposition of the crystallographic (green) and redocked (magenta) ligand conformations, showing an RMSD of 1.9 Å (28 heavy atoms). Panel II: (A) crystallographic binding pose of BLU0588; (B) binding pose obtained by redocking using AutoDock Vina; and (C) superposition of the crystallographic (green) and redocked (magenta) ligand conformations, showing an RMSD of 0.80 Å (32 heavy atoms).
Quinolines have been identified as a valuable scaffold for the development of kinase inhibitors with therapeutic potential. One example is the 3H‐pyrazolo[4,3–f]quinoline moiety, a privileged kinase inhibitor core with potent activity against acute myeloid leukemia (AML) cell lines [39]. The four compounds 11, 12, 13, and 14 contain the same quinoline–triazole core as the 3H‐pyrazolo[4,3–f]quinoline moiety, which may disrupt the hydrogen‐bonding interactions in the hinge region of PKA. Therefore, the focus is on the different aryl substituents to explain the observed variations in inhibitory activity. For example, compound 11, identified as the most effective inhibitor, features a para‐allyl substituent. This substituent likely provides an extended hydrophobic moiety that may integrate into the lipophilic groove located beneath the glycine‐rich loop. This perhaps maximizes van der Waals contacts and contributes to favorable binding enthalpy. Additionally, the fused benzoxazole‐like pattern favorably orients dipoles for potential water‐mediated contacts without introducing the excessive polarity observed in aldehyde‐containing analogues. The compound designated as 13 is a little less effective than compound 11, probably due to the presence of a para‐aldehyde substituent on the aromatic ring, with a polar, reactive carbonyl group. This particular functional group may influence the hydrophobicity necessary for optimal accommodation within the inhibitory pocket, potentially resulting in a marginal reduction in activity. Furthermore, the electron‐withdrawing properties of the aldehyde diminish electron density throughout the aromatic system, thereby impairing the benzyloxy oxygen's capacity to engage in stabilizing interactions. Compound 12 bears the same para‐aldehyde substituent on the aromatic ring but also contains a meta‐methoxy group, which may affect its inhibitory activity compared to 11 and 13. Ultimately, compound 14 contains a para‐aldehyde and two moderately bulky ortho‐methoxy groups, which may increase the steric hindrance of the ligand due to their protruding methyl units, and may physically prevent the regular interactions within the ATP‐binding pocket.
Despite its potent inhibition of the PKA Cα‐subunit in a cell‐free enzymatic assay, compound 11 shows no cytotoxicity, underscoring the distinction between biochemical target inhibition and cellular efficacy. Although enzyme‐based assays provide direct evidence of target interaction, they do not account for factors such as solubility, membrane permeability, intracellular distribution, or efflux mechanisms, all of which strongly influence cellular responses [40]. Compound 11 binds efficiently to the ATP‐binding pocket of PKA, as supported by docking and low‐micromolar IC50 values. However, its pronounced lipophilicity, conferred by the para‐allyl substituent, may limit effective intracellular target interaction. Highly lipophilic compounds are known to have reduced aqueous solubility and to preferentially partition into lipid membranes. This can significantly lower the free cytosolic concentration required for effective kinase inhibition in cells [41]. Furthermore, the selective inhibition of the PKA Cα‐subunit alone may be insufficient to induce antiproliferative effects in the tested cancer cell lines. PKA regulates diverse, context‐dependent signaling pathways and functions as either a pro‐survival or pro‐apoptotic mediator, depending on the cellular background and signaling state [42]. In many tumor models, partial inhibition of a single kinase can be compensated for by parallel or redundant signaling pathways, resulting in limited effects on cell viability [43]. In contrast, compounds in this series that exhibited cytotoxic activity may affect multiple kinases or signaling nodes. This is consistent with the idea that polypharmacology correlates with anticancer efficacy [44]. Taken together, these observations suggest that compound 11 is a potent, selective biochemical inhibitor of PKA. However, it lacks the physicochemical and signaling network disruption necessary to translate enzymatic inhibition into measurable cytotoxicity.
One of the most studied regions of the catalytic subunit of PKA is the G‐loop, located at the protein's active site. As a highly conserved structural element, the G‐loop provides crucial flexibility to accommodate the ATP molecule and orient it for catalysis. This loop undergoes conformational changes during the phosphorylation reaction, facilitating the transfer of the γ‐phosphate from ATP to the substrate [45]. Since ATP protected against inhibition and all four compounds (11–14) share a scaffold structure consisting of a quinoline–triazole core, they may be classified as Type I protein kinase inhibitors. In general, Type I inhibitors contain a heterocyclic moiety that occupies the purine‐binding pocket and acts as an ATP‐binding site competitor, mimicking the purine ring of ATP [46]. For example, the ATP binding site is highly conserved across the kinome [47], which may lead to off‐target effects. Then, the application of PKA inhibitors presents clear challenges. For this reason, developing novel inhibitors should focus on exploiting unique PKA conformations, allosteric sites, or substrate‐binding domains to achieve greater selectivity and overall efficacy.
Evidence from cell lines suggests that these compounds might also impact other protein kinases different than PKA, though causal proof is missing, and attributing these effects to other kinases remains speculative. For instance, compounds 14 and 20 showed selectivity for T‐cell leukemia, implying potential involvement of tyrosine kinases related to T‐cell activation. In platelets, interactions between PKC, PKA, and PP2A, and both BTK and Syk, have been studied [48]. The results suggest that these three enzymes (PKC, PKA, and PP2A) can modulate BTK and Syk, which are critical kinases in B‐cell leukemia and may explain the effects of compound 13. Compound 19 was specific to A549 cells and showed moderate specificity for B‐cell lines, indicating potential effects on Src kinases. Recently, it has also been demonstrated that A549 proliferation is affected by PI3K/AKT/mTOR, MAPK, and Wnt signaling pathways, which differ in part from the principal signal transduction pathways used in the other cell lines studied [49]. Compound 19 might affect PI3K and Wnt signaling cascades, which are crucial for the survival of several tumor cell lines [50]. Compound 12 was selective for the p53 KO cell line, likely influencing p53‐dependent cell cycle regulation, whereas compound 22 affected all tumor cell lines except A549, which suggests an effect on different signaling routes. Other structures appeared to be involved in broader, nonspecific signaling pathways.
It is important to remember that results from cell‐based assays often indicate multikinase effects or polypharmacological activity. The biological activity of the compounds used here was moderate, with IC50 values in the micromolar range. Micromolar potency often correlates with widespread off‐target effects across the kinome and a more extensive kinome profiling panel is necessary to precisely identify secondary targets. Having experimentally demonstrated PKA inhibition for selected compounds, it is conceivable that these structural scaffolds might also modulate parallel signaling networks like BTK, Src, or PI3K/AKT. However, because direct biochemical evidence for these multikinase interactions is currently lacking, these downstream effects are presented strictly as mechanistically plausible hypotheses that warrant future experimental validation. In conclusion, we have identified a novel series of preliminary small‐molecule leads. Although their current biological activity resides primarily in the micromolar IC50 range, the moderate selectivity observed provides a valuable baseline for structural optimization in future anticancer drug discovery campaigns.
3. Conclusion
Hybrid compounds containing a quinoline unit coupled to natural phenols represent a new class of therapeutically interesting compounds. For the synthesis, we used a 1,2,3‐triazole species as a coupling connector, prepared via a well‐known Cu(I)‐catalyzed azide–alkyne cycloaddition reaction. The various synthesized compounds elicited a diversity of responses, with only structures 11, 15, and 16 showing no cytotoxicity effect on any cell line, and compound 17 affecting both normal and cancer cells. Compound 13 was the most promising due to its cytotoxicity against most of the tumor cell lines except A549. In addition, compound 13 markedly affected B‐cell leukemia cell lines, although no effect on primary lymphocytes or normal cell lines was observed. Compounds 14 and 20 were highly specific for T‐cell leukemia, whereas compound 19 was specific for A549 and moderately specific for B‐cell lines. Compound 12 specifically affected the human colorectal carcinoma HCTp53 KO and T‐cell leukemia CCRF‐CEM cell lines. Compound 22 displayed unique effects by inducing cell death in leukemic and colon carcinoma lines but not lung cancer lines. In vitro assays and computational molecular docking identified compounds 11–14 as binders to the PKA Cα‐subunit, suggesting a protein kinase‐targeted anticancer mechanism. Although compound 11 was the most effective PKA inactivator agent, its lack of cytotoxicity highlights the importance of physicochemical properties and intracellular target accessibility in determining cellular efficacy. Docking studies also indicated that the quinoline–triazole scaffold was capable of occupying the ATP‐binding pocket of the PKA Cα‐subunit, since the compounds established interactions with key residues that are involved in nucleotide recognition and/or are located in the active site of the enzyme. Overall, this study provides valuable structure–activity insights that may guide the rational optimization of quinoline–triazole hybrid derivatives toward improved cellular potency and therapeutic potential.
4. Experimental Section
4.1. Chemistry
Fourier transform infrared (FTIR) spectroscopy was performed using a Perkin‐Elmer Spectrum Two instrument equipped with a Diamond/ZnSe attenuated total reflectance (ATR) sampling accessory (Waltham, MA, USA). Measurements were taken at room temperature, with 64 scans per minute per analysis, a resolution of 0.5 cm−1, and a spectral range of 4000–450 cm−1. 1H and 13C NMR spectra were recorded on a Nanalysis 100 MHz PRO Benchtop spectrometer (Calgary, AB, Canada) operating at 100 MHz for 1H and 25.8 MHz for 13C. CDCl3 or dimethyl sulfoxide (DMSO‐d6) was used as a solvent. Chemical shifts are reported in ppm downfield from the residual solvent peaks: δ 7.25 for 1H NMR and 77.0 for 13C NMR in CDCl3, and δ 2.54 for 1H NMR and 44.5 for 13C NMR in DMSO‐d6. Mass spectra were obtained using an Agilent GC–MS model 5977C spectrometer with electron ionization (EI) at 70 eV, coupled directly to an Agilent model 8860 gas chromatograph (Wilmington, DE, USA). Elemental analyses were conducted with a Perkin‐Elmer 2400 CHN elemental analyzer, yielding results within ±0.4% of the theoretical values. Melting points were determined using a Fisher–Johns fusiometer (Thermo Fisher Scientific, Waltham, MA, USA) and are reported uncorrected. Thin‐layer chromatography (TLC) was performed on Merck silica F254 plates (0.25 mm thickness; Darmstadt, Germany), with spots visualized under UV light at 254 nm. All chemical reagents were purchased from Aldrich Chemical Co. (St. Louis, MO, USA). All solvents were distilled and dried by standard procedures before use.
4.2. General Procedure for the Synthesis of Methoxy‐4‐(prop‐2‐yn‐1‐yloxy)derivatives 3–8
To a solution of compounds 1a–f (5.0 mmol) in dry acetone, K2CO3 (15 mmol) was added, and the mixture was stirred at room temperature (rt) for 5 min. Propargyl bromide (5.0 mmol) was added, and the resulting mixture was heated to 60–65 °C for 12 h, at which point TLC indicated the reaction was complete. The reaction mixture was diluted with 50 mL of water and extracted with ethyl acetate (3 × 50 mL). The organic extracts were combined, washed with a 7.5% KOH solution (2 × 20 mL) and brine (2 × 10 mL), dried over anhydrous Na2SO4, and concentrated under a rotavapor to obtain pure compounds 3–8 in good yields.
4.2.1. 4‐Allyl‐2‐Methoxy‐1‐(Prop‐2‐yn‐1‐yloxy)benzene 3 [51]
Yellow solid, Yield: 92%, FTIR (ATR) cm−1: 3288, 2936, 1638, 1592, 1508, 1259, 1216, 1139, 996, 803; 1H NMR (100 MHz, CDCl3) δ: 2.54 (t, 1H, J = 2 Hz), 3.37 (d, 2H, J = 6 Hz), 3.92 (s, 3H, OCH3), 4.78 (d, 2H, J = 2 Hz), 5.07–5.21 (m, 2H, =CH2), 6.23–5.84 (m, 1H, =CH), 6.71–6.85 (m, 2H, Ar), 7.04 (d, 1H, J = 8 Hz); 13C NMR (25.8 MHz, CDCl3) δ: 39.9, 55.9, 57.2, 75.5, 78.4, 112.7, 115.3, 115.7, 120.5, 134.5, 137.5, 145.4, 149.9. MS, m/z (%) 202.10 [M] (40), 163.08 [M‐C3H3] (100), 161.06 [M‐C3H4] (5), 131.04 [C9H6O] (12), 105.07 [C7H5O] (16), 91.03 [M‐C6H3O] (45).
4.2.2. 3‐Methoxy‐4‐(Prop‐2‐yn‐1‐yloxy)benzaldehyde 4
White solid, Yield: 87%, Mp: 86 °C, Lit. (86 °C) [52, 53], FTIR (ATR) cm−1: 3247, 3021, 1688, 1587, 1506, 1261, 1134, 1001, 804; 1H NMR (100 MHz, CDCl3) δ: 2.61 (t, 1H, J = 2 Hz), 3.99 (s, 3H, OCH3), 4.90 (d, 2H, J = 2 Hz), 7.17 (d, 1H, J = 8 Hz), 7.47–7.56 (m, 2H, Ar), 9.92 (s, 1H, CHO); 13C NMR (25.8 MHz, CDCl3) δ: 56.1, 56.7, 76.6, 77.4, 109.8, 112.9, 126.1, 131.2, 150.2, 152.3, 190.8; MS, m/z 190.06 [M] (69), 161.04 [M‐CHO] (11), 151.04 [M‐C3H3] (100), 105.03 [C7H5O] (9), 91.03 [C6H3O] (9).
4.2.3. 1‐(4‐Methoxy‐2‐(Prop‐2‐yn‐1‐yloxy)phenyl)ethan‐1‐one 5
White solid, Yield: 97%, Mp: 75–76 °C, Lit. (74.7 °C) [15], FTIR (ATR) cm−1: 3275, 2999, 1647, 1599, 1430, 1253, 1015, 965, 827; 1H NMR (100 MHz, CDCl3) δ: 2.61 (t, 1H, J = 2 Hz), 2.66 (s, 3H, CH3), 3.90 (s, 3H, OCH3), 4.55 (d, 2H, J = 2 Hz), 6.58–6.69 (m, 2H, Ar), 7.88 (d, 1H, J = 9 Hz); 13C NMR (25.8 MHz, CDCl3) δ: 27.6, 55.6, 56.3, 76.3, 77.1, 99.9, 106.3, 121.9, 132.7, 164.3, 189.4, 205.6; (EI) m/z (%): 204.08 [M] (16), 189.05 [M‐CH3] (51), 161.06 [M‐C2H3O] (100), 136.04 [C8H8O2] (4).
4.2.4. 1‐Isopropyl‐4‐Methyl‐2‐(Prop‐2‐yn‐1‐yloxy)benzene 6 [54]
Yellow solid, Yield: 93%, FTIR (ATR) cm−1: 3292, 2960, 2869, 1612, 1578, 1504, 1244, 1162, 1036, 810; 1H NMR (100 MHz, CDCl3) δ: 1.29 (d, 6H, J = 7 Hz), 2.42 (s, 3H, CH3), 2.56 (t, 1H, J = 2 Hz), 3.40 (q, 1H, J = 7 Hz), 4.78 (d, 2H, J = 2 Hz), 6.85–6.92 (m, 2H, Ar), 7.20 (d, 1H, J = 8 Hz); 13C NMR (25.8 MHz, CDCl3) δ: 21.3, 22.9, 26.6, 56.2, 75.0, 79.3, 113.3, 122.3, 126.2, 134.9, 136.3, 154.9; (EI) m/z (%): 188.13 [M] (41), 173.10 [M‐CH3] (38), 158.00 [M‐C2H6] (24), 145.09 [M‐C3H7] (100), 133.08 [M‐C3H3O] (12); Anal. Calcd for C13H16O: C, 82.94; H, 8.57. Found: C, 82.95; H, 8.63.
4.2.5. 3,5‐Dimethoxy‐4‐(Prop‐2‐yn‐1‐yloxy)benzaldehyde 7
Beige solid, Yield: 87%, Mp: 101–102 °C, FTIR (ATR) cm−1: 3277, 2965, 1687, 1590, 1456, 1327, 1231, 1122, 995, 835; 1H NMR (100 MHz, CDCl3) δ: 2.49 (t, 1H, J = 2 Hz), 3.98 (s, 6H, 2 × OCH3), 4.88 (d, 2H, J = 2 Hz), 7.18 (s, 2H, Ar), 9.92 (s, 1H, CHO); 13C NMR (25.8 MHz, CDCl3) δ: 56.4, 60.0, 75.4, 106.7, 126.7, 132.4, 143.3, 154.1, 190.8; MS, m/z 220.05 [M] (24), 181.05 [M‐C3H3] (100), 152.06 [C8H8O3] (2), 136.02 [C8H8O2] (8), 120.99 [C7H5O2] (5), 103.07 [C7H3O] (1); Anal. Calcd for C12H12O4: C, 65.45; H, 5.49. Found: C, 65.47; H, 5.53.
4.2.6. 4‐(Prop‐2‐yn‐1‐yloxy)benzaldehyde 8
White solid, Yield: 93%, Mp: 76–77 °C (77–79 °C) [55], FTIR (ATR) cm−1: 3229, 2953, 1670, 1586, 1508, 1436, 1261, 1130, 1013, 810; 1H NMR (100 MHz, CDCl3) δ: 2.62 (t, 1H, J = 2 Hz), 4.82 (d, 2H, J = 2 Hz), 7.23 (d, 2H, J = 8 Hz), 7.86 (d, 2H, J = 8 Hz), 9.94 (s, 1H, CHO); 13C NMR (25.8 MHz, CDCl3) δ: 56.0, 76.4, 115.3, 126.9, 130.7, 131.9, 162.4, 190.7; Anal. Calcd for C10H8O2: C, 74.99; H, 5.03. Found: C, 74.93; H, 5.07.
4.3. General Procedure for Synthesis of 4‐Azido‐7‐Chloroquina 9,10
The required intermediates 9 and 10 were prepared using a partially modified procedure previously reported by de Souza et al. [56]. All compounds were characterized using spectral data. In general, the 1H NMR spectrum displayed the five quinoline protons in the range of 6.66–8.91 ppm and the aliphatic protons at 3.69–3.75 ppm. The 13C NMR spectrum showed the nine quinoline carbon signals in the region of 99.0–150.7 ppm, while the aliphatic carbon signals appeared at 42.3–49.9 ppm. Additionally, the IR spectra of both compounds showed characteristic absorption peaks for the N3 (azide) group near 2124 cm−1, confirming the formation of intermediates 9 and 10 [49].
4.3.1. 4‐Azido‐7‐Chloroquinoline 9
White solid, Yield: 91%, mp: 110–112 °C (110–112 °C) [56].
4.3.2. N‐(2‐Azidoethyl)‐7‐Chloroquinolin‐4‐Amine 10
White solid, Yield: 84%, mp: 137–139 °C (145–147 °C) [56].
4.4. General Procedure for the Preparation of Compounds 7‐Chloro‐4‐(1H‐1,2,3‐triazol‐1‐yl)quinolines 11–16 and N‐(4‐(1H‐1,2,3‐triazol‐1‐yl)ethyl)‐7‐Chloroquinolin‐4‐Amine 17–22
A mixture of t ert‐BuOH/H2O (1:1) (8 mL) was added to 4‐Azido‐7‐chloroquinoline 9 or N‐(2‐Azidoethyl)‐7‐chloroquinolin‐4‐amine 10 (1.1 mmol), the appropriate acetylene (1.0 mmol), L‐ascorbic acid sodium salt (0.28 mmol), and CuSO4·5H2O (0.07 mmol). The reaction mixture was stirred vigorously at rt for 12 h. The progress of TLC was used to monitor the reaction (DCM/methanol 9.5:0.5). Upon completion, the reaction mixture was poured into ice‐cold water (15 mL) and extracted with ethyl acetate (2 × 20 mL). The organic extracts were then combined, washed with water (2 × 10 mL) and brine (2 × 10 mL), dried over anhydrous Na2SO4, and concentrated using a rotavapor. The residual crude product was purified by silica gel column chromatography using a mixture of DCM/MeOH (9.5/0.5) as the eluent to obtain compounds 11–22.
4.4.1. 4‐(4‐((4‐Allyl‐2‐methoxyphenoxy)methyl)‐1H‐1,2,3‐triazol‐1‐yl)‐7‐Chloroquinoline 11
White solid, Yield: 91%, Mp: 114 °C, IR cm−1: 3149, 1610, 1591, 1560, 1512, 1257, 1223, 1135, 992, 804; 1H NMR (100 MHz, CDCl3), δ: 3.41 (d, 2H, CH = CH2, J = 6.5 Hz), 3.93 (s, 3H, OCH3), 5.07 (m, 2H, CH2), 5.48 (s, 2H, CH2), 5.83–6.16 (m, 1H, =CH=), 6.77–6.83 (m, 2H, H3´, 5´), 7.08 (d, 1H, H6´, J = 9 Hz), 7.54 (d, 1H, H3, J = 5 Hz), 7.64 (dd, 1H, H6, J 1 = 9 Hz, J 2 = 2 Hz), 8.02 (d, 1H, H5, J = 9 Hz), 8.16 (s, 1H, H5´´), 8.3 (d, 1H, H8, J = 2 Hz), 9.11 (d, 1H, H2, J = 5 Hz); 13C NMR (25.8 MHz, CDCl3), δ: 33.8, 55.9, 63.6, 112.4, 112.7, 115.3, 115.8, 116.1, 120.7, 124.7, 129.0, 129.4, 134.5, 136.9, 137.4, 140.9, 145.5, 149.9, 150.2, 151.4; (EI) m/z (%): 378.13 [M+‐C2H3] (100), 162.00 [M+‐ C13H14N3O2] (63), 177.09 [M+‐ C11H13O2] (31), 147.06 [M+‐ C10H11O] (32), 102.04 [C7H4N] (21); Anal. Calcd for C22H19ClN4O2: C, 64.95; H, 4.71; N, 13.77. Found: C, 65.02; H, 4.70; N, 14.09.
4.4.2. 4‐((1‐(7‐Chloroquinolin‐4‐yl)‐1H‐1,2,3‐triazol‐4‐yl)methoxy)‐3‐Methoxybenzaldehyde 12
Beige solid, Yield: 83%, Mp: 80–82 °C, Lit. (137–138 °C) [52], IR cm−1: 3082, 1684, 1589, 1509, 1455, 1264, 1135, 987, 805; 1H NMR (100 MHz, CDCl3), δ: 4.00 (s, 3H, OCH3), 5.59 (s, 2H, CH2), 7.28–7.70 (m, 4H, Ar), 8.01 (d, 1H, H5, J = 9 Hz), 8.21 (s, 1H, H5´´), 9.11 (d, 1H, H2, J = 5 Hz), 9.94 (s, 1H, CHO); 13C NMR (25.8 MHz, CDCl3), δ: 56.1, 62.9, 109.8, 112.9, 116.1, 123.8, 124.5, 125.0, 126.4, 127.3, 129.0, 129.4, 131.1, 136.9, 140.8, 144.3, 150.2, 151.3, 190.7; (EI) m/z (%): 366.11 [M‐CHO] (45), 207.05 [C12H8N4] (100), 162.05 [C9H5ClN] (29), 102.09 [C7H4N] (26); Anal. Calcd for C20H15ClN4O3: C, 60.84; H, 3.83; N, 14.19. Found: C, 60.91; H, 3.86; N, 14.41.
4.4.3. 4‐((1‐(7‐Chloroquinolin‐4‐yl)‐1H‐1,2,3‐triazol‐4‐yl)methoxy)benzaldehyde 13
Beige solid, Yield: 81%, Mp: 184 °C, IR cm−1: 3065, 1688, 1594, 1510, 1434, 1264, 1164, 1006, 844; 1H NMR (100 MHz, CDCl3), δ: 5.52 (s, 2H, CH2), 7.22 (d, 2H, H2´, 6´, J = 8 Hz), 7.56 (d, 1H, H3, J = 5 Hz), 7.65 (dd, 1H, H6, J 1 = 8 Hz, J 2 = 2 Hz), 7.90–8.07 (m, 3H, Ar), 8.19 (s, 1H, 5H´´), 8.32 (d, 1H, H8, J = 2 Hz), 9.12 (d, 1H, H2, J = 5 Hz), 9.98 (s, 1H, CHO); 13C NMR (25.8 MHz, CDCl3), δ: 61.8, 115.8, 117.6, 125.8, 128.7, 129.5, 130.4, 132.3, 136.1, 143.6, 148.6, 152.8, 163.5, 168.3, 170.8, 191.8; (EI) m/z (%): 336.04 [M‐CHO] (20), 207.07 [C12H8N4] (100), 162.03 [C9H5ClN] (17), 101.90 [C7H4N] (10); Anal. Calcd for C19H13ClN4O2: C, 62.56; H, 3.59; N, 15.36. Found: C, 62.58; H, 3.64; N, 15.57.
4.4.4. 4‐((1‐(7‐Chloroquinolin‐4‐yl)‐1H‐1,2,3‐triazol‐4‐yl)methoxy)−3,5‐Dimethoxybenzaldehyde 14
White solid, Yield: 76%, Mp: 167–168 °C, IR cm−1: 2952, 1692, 1592, 1501, 1451, 1328, 1228, 1125, 994, 877; 1H NMR (100 MHz, CDCl3), δ: 4.00 (S, 6H, 2 x OCH3), 5.53 (s, 2H, CH2), 7.22 (s, 2H, H2´, 6´), 7.54–7.59 (m, 2H, H3, 6), 7.99 (d, 1H, H5, J = 8 Hz), 8.24 (s, 1H, 5H´´), 8.32 (d, 1H, H8, J = 2 Hz), 9.12 (d, 1H, H2, J = 5 Hz), 9.95 (s, 1H, CHO); 13C NMR (25.8 MHz, CDCl3), δ: 56.4, 66.3, 106.8, 116.1, 124.5, 124.9, 129.1, 129.4, 132.5, 136.9, 141.0, 141.7, 145.8, 150.2, 151.4, 153.9, 190.8; (EI) m/z (%): 396.14 [M+‐ CHO] (10), 230.07 [M‐C10H11O4] (33), 207.03 [C12H8N4] (100), 166.08 [M‐C12H8ClN4O] (33), 97.05 [ C3H3N3O] (11); Anal. Calcd for C21H17ClN4O4: C, 59.37; H, 4.03; N, 13.19. Found: C, 59.39; H, 4.07; N, 12.95.
4.4.5. 7‐Chloro‐4‐(4‐((2‐Isopropyl‐5‐methylphenoxy)methyl)‐1H‐1,2,3‐triazol‐1‐yl)quinoline 15
Yellow solid, Yield: 87%, IR cm−1: 2959, 2923, 2868, 1611, 1561, 1504, 1252, 1027, 878, 811; 1H NMR (100 MHz, CDCl3), δ: 1.26 (d, 6H, CH3, J = 7 Hz), 2.41 (s, 3H, CH3), 3.38 (sex, 1H, CH, J = 7 Hz), 5.45 (s, 2H, CH2), 6.85–6.92 (m, 2H, H4´, 6´), 6.18 (d, 1H, H3´, J = 8 Hz), 7.57 (d, 1H, H3, J = 5 Hz), 7.65 (dd, 1H, H6, J 1 = 9 Hz, J 2 = 2 Hz), 8.03 (d, 1H, H5, J = 9 Hz), 8.11 (s, 1H, 5H´´), 8.31 (d, 1H, H8, J = 2 Hz), 9.11 (d, 1H, H2, J = 5 Hz); 13C NMR (25.8 MHz, CDCl3), δ: 21.3, 22.9, 26.7, 62.5, 113.1, 116.2, 120.7, 122.3, 124.1, 124.6, 126.3, 129.1, 136.6, 137.1, 141.0, 145.1, 150.2, 151.4, 155.3, 161.9, 169.9; (EI) m/z (%): 392.14 [M] (2), 364.10 [C20H17ClN4O] (59), 349.07 [M‐C3H7] (29), 215.03 [C12H14N3O] (16), 162.02 [M‐C13H16N3O] (31), 135.06 [M‐C12H8ClN4O] (100), 97.07 [C3H3N3O] (4), 81.06 [C3H3N3] (22); Anal. Calcd for C22H21ClN4O: C, 67.26; H, 5.39; N, 14.26 Found: C, 67.35; H, 5.42; N, 14.53.
4.4.6. 1‐(2‐((1‐(7‐Chloroquinolin‐4‐yl)‐1H‐1,2,3‐triazol‐4‐yl)methoxy)‐4‐Methoxyphenyl)ethan‐1‐one 16
White solid, Yield: 89%, Mp: 143–144 °C, IR cm−1: 3052, 2982, 1645, 1600, 1501, 1439, 1328, 1261, 1124, 966, 812; 1H NMR (100 MHz, CDCl3), δ: 2.62 (s, 3H, CH3), 3.91 (s, 3H, OCH3), 5.47 (s, 2H, CH2), 6.61 (dd, 1H, H5´, J 1 = 8 Hz, J 2 = 3 Hz), 6.73 (d, 1H, H3´, J = 3 Hz), 7.54 (d, 1H, H3, J = 5 Hz), 7.62 (dd, 1H, H6, J 1 = 9 Hz, J 2 = 2 Hz), 7.84 (d, 1H, H6´, J 1 = 8 Hz), 7.96 (d, 1H, H5, J = 8 Hz), 8.22 (s, 1H, 5H´´), 8.27 (d, 1H, H8, J = 2 Hz), 9.09 (d, 1H, H2, J = 2 Hz); 13C NMR (25.8 MHz, CDCl3), δ: 31.6, 55.7, 62.6, 100.0, 106.2, 116.1, 121.7, 124.4, 124.8, 129.1, 129.6, 132.9, 137.0, 144.4, 150.3, 151.4, 159.3, 164.5, 197.5; (EI) m/z (%): 405.02 [M] (4), 379.04 [M‐CH3O] (3), 364.86 [M‐ C2H3O] (2), 206.98 [C12H8N4] (100), 192.98 [C11H6N4] (13), 165.00 [M‐C12H8ClN4] (7), 135.02 [C8H6O2] (17), 96.05 [C3H3N3O] (29), 81.02 [C3H3N3] (45); Anal. Calcd for C21H17ClN4O3: C, 61.69; H, 4.19; N, 13.70. Found: C, 61.71; H, 4.23; N, 13.92.
4.4.7. N‐(2‐(4‐((4‐Allyl‐2‐methoxyphenoxy)methyl)‐1H‐1,2,3‐triazol‐1‐yl)ethyl)‐7‐Chloroquinolin‐4‐Amine 17
Beige solid, Yield: 86%, Mp: 150–152 °C, IR cm−1: 3351, 3251, 3218, 2937, 1610, 1587, 1515, 1260, 1223, 1140, 997, 805, 793; 1H NMR (100 MHz, CDCl3) δ: 3.35 (d, 2H, CH = CH2, J = 6.5 Hz), 3.83 (s, 3H, OCH3), 3.97 (t, 2H, 2H, H9, J = 5.7 Hz), 4.74 (t, 2H, H10, J = 5.7 Hz), 5.10 (m, 2H, CH2), 5.25 (s, 2H, CH2), 5.96 (m, 1H, =CH=), 6.44 (d, 1H, H3, J = 4 Hz), 6.74 (m, 2H, H3´, 5´), 6.94 (d, 1H, H6´, J = 8 Hz), 7.35 (m, 1H, Ar), 7.84 (m, 3H, Ar), 8.51 (brs, 1H, H2); 13C NMR (25.8 MHz DMSO d6), δ: 39.8, 42.7, 48.6, 55.8, 63.3, 112.6, 114.6, 115.8, 120.6, 123.0, 125.9, 133.3, 134.5, 135.4, 137.4, 145.7, 149.6, 152.3; (EI) m/z (%): 207.04 [M‐C13H14N3O2] (100), 162.94 [C10H11O2] (2), 97.05 [C3H3N3O] (3); Anal. Calcd for C24H24ClN5O2: C, 64.07; H, 5.38; N, 15.57. Found: C, 63.98; H, 5.43; N, 15.79.
4.4.8. 4‐((1‐(2‐((7‐Chloroquinolin‐4‐yl)amino)ethyl)‐1H‐1,2,3‐triazol‐4‐yl)methoxy)‐3‐Methoxybenzaldehyde 18
Beige solid, Yield: 82%, Mp: 210 °C, IR cm−1: 3324, 3170, 1674, 1585, 1265, 1221, 983, 805; 1H NMR (100 MHz, CDCl3) δ: 3.83 (m, 5H, CH2, OCH3), 4.74 (t, 2H, H10, J = 6 Hz), 4.96 (brs, 1H, NH), 5.28 (s, 2H, CH2), 6.59 (brs, 1H, H3), 7.21–7.59 (m, 4H, Ar), 7.55 (brs, 1H, Ar), 8.14–8.23 (m, 2H, Ar, 5H´´), 9.87 (s, 1H, CHO); 13C NMR (25.8 MHz DMSO d6), δ: 42.9, 48.5, 55.5, 62.3, 110.5, 113.2, 124.2, 124.9, 125.2, 126.2, 130.5, 142.5, 143.7, 149.8, 153.3, 191.8; (EI) m/z (%): 438.03 [M+] (1.8), 409.05 [M‐CHO] (6), 286.00 [M‐C8H7O3] (5), 207.03 [M‐C11H10N3O3] (100), 163.02 [C10H11O2] (5), 96.05 [C3H3N3O] (13); Anal. Calcd for C22H20ClN5O3: C, 60.35; H, 4.60; N, 15.99. Found: C, 60.39; H, 4.62; N, 16.23.
4.4.9. 4‐((1‐(2‐((7‐Chloroquinolin‐4‐yl)amino)ethyl)‐1H‐1,2,3‐triazol‐4‐yl)methoxy)‐Benzaldehyde 19
White solid, Yield: 89%, Mp: 176–178 °C, IR cm−1: 3316, 3113, 1672, 1582, 1509, 1255, 1157, 998, 866; 1H NMR (100 MHz, DMSO d6), δ: 2.86 (d, CH2, H9, J = 6 Hz), 4.72 (t, 2H, H10, J = 6 Hz), 5.28 (s, 2H, CH2), 6.55 (d, 1H, H3, J = 5 Hz), 7.24 (d, 2H, H2´, 6´, J = 8 Hz), 7.43–7.52 (m, 2H, Ar, NH), 7.83–7.92 (m, 3H, Ar), 8.16 (d, 1H, H5, J = 8 Hz), 8.29 (s, 1H, 5H´´), 8.42 (brs, 1H, H2), 9.90 (s, 1H, CHO); 13C NMR (25.8 MHz, DMSO d6), δ: 42.1, 48.5, 62.0, 115.7, 124.4, 124.8, 125.7, 128.1, 130.4, 132.2, 134.1, 142.5, 150.2, 156.1, 163.5, 191.8; (EI) m/z (%): 407.05 [M] (1), 379.15 [M‐CHO] (11), 207.05 [M‐C10H8N3O2] (100), 162.95 [C10H11O2] (5), 96.02 [C3H3N3O] (13); Anal. Calcd for C21H18ClN5O2: C, 61.84; H, 4.45; N, 17.17. Found: C, 61.92; H, 4.51; N, 17.55.
4.4.10. 4‐((1‐(2‐((7‐Chloroquinolin‐4‐yl)amino)ethyl)‐1H‐1,2,3‐triazol‐4‐yl)methoxy)−3,5‐Dimethoxybenzaldehyde 20
Yellow solid, Yield: 76%, Mp: 158–160 °C, IR cm−1: 3192, 3123, 1689, 1577, 1497, 1326, 1120, 987, 853; 1H NMR (100 MHz, DMSO d6), δ: 3.74–3.87 (m, 8H, CH2, 2 x OCH3), 4.70 (t, 2H, H10, J = 6 Hz), 5.10 (s, 2H, CH2), 6.54 (d, 1H, H3, J = 5 Hz), 7.23 (s, 2H, H2´, 6´), 7.47 (dd, 1H, H6, J 1 = 8, J 2 = 2 Hz), 7.83 (d, 1H, H8, J = 2 Hz), 8.17–8.22 (m, 2H, H5´´, H5), 8.29 (s, 1H, 5H´´), 8.44 (brs, 1H, H2), 9.88 (s, 1H, CHO); 13C NMR (25.8 MHz, DMSO d6), δ: 42.9, 48.2, 56,6, 65.9, 107.3, 124.2, 124.8, 125.0, 125.4, 128.8, 132.4, 150.3, 154.0, 173.1, 192.3; (EI) m/z (%): 467.08 [M+] (1.2), 438.05 [M‐CHO] (5), 207.05 [M‐C12H12N3O4] (100)162.95 [C10H11O2] (5), 96.02 [C3H3N3O] (6); Anal. Calcd for C23H22ClN5O4: C, 59.04; H, 4.74; N, 14.97. Found: C, 58.97; H, 4.73; N, 15.19.
4.4.11. 7‐Chloro‐N‐(2‐(4‐((2‐Isopropyl‐5‐methylphenoxy)methyl)‐1H‐1,2,3‐triazol‐1‐yl)ethyl)quinolin‐4‐Amine 21
White solid, Yield: 83%, Mp: 132–134 °C, IR cm−1: 3327, 3097, 2960, 2926, 2868, 1607, 1589, 1331, 1254, 1011, 871, 805; 1H NMR (100 MHz, CDCl3), δ: 1.18 (d, 6H, CH3, J = 7 Hz), 2.34 (s, 3H, CH3), 3.18 (sex, 1H, CH, J = 7 Hz), 4.00 (t, 2H, H9, J = 6 Hz), 4.83 (t, 2H, H10, J = 6 Hz), 5.24 (s, 2H, CH2), 6.47 (d, 1H, H3, J = 5 Hz), 6.79–6.85 (m, 2H, Ar), 7.10–7.18 (m, 2H, Ar), 7.34–7.43 (m, 2H, Ar), 7.70 (s, 1H, 5H´´), 7.87–8.00 (m, 2H, Ar, NH), 8.49 (brs, 1H, H2); 13C NMR (25.8 MHz, DMSO d6), δ: 21.3, 23.1, 26.5, 43.3, 48.4, 62.2, 113.6, 121.9, 124.8, 125.1, 125.5, 126.1, 133.8, 135.1, 136.3, 143.7, 150.1, 151.7, 155.8, 161.9, 169.9. (EI) m/z (%): 435.18 [M] (2), 400.15 [M‐Cl] (4), 207.05 [M‐C13H16N3O] (18), 191.04 [M‐C14H18N3O] (69), 163.04 [M‐C13H11ClN5] (7), 150.09 (M‐C12H9ClN5) (26), 135.07 (C9H11O) (100), 81.07 (C3H3N3) (13), 67.06 (C2H11N3) (18); Anal. Calcd for C24H26ClN5O: C, 66.12; H, 6.01; N, 16.06. Found: C, 66.15; H, 6.05; N, 15.87.
4.4.12. 1‐(2‐((1‐(2‐((7‐Chloroquinolin‐4‐yl)amino)ethyl)‐1H‐1,2,3‐triazol‐4‐yl)methoxy)‐4‐Methoxyphenyl)ethan‐1‐One 22
Beige solid, Yield: 85%, Mp: 167–168 °C, IR cm−1: 3348, 3112, 3001, 2949, 1650, 1580, 1359, 1265, 1171, 1005, 829; 1H NMR (100 MHz, CDCl3), δ: 2.48 (s, 3H, CH3), 3.86 (s, 3H, OCH3), 3.91 (t, 2H, H9, J = 6 Hz), 4.76 (t, 2H, H10, J = 6 Hz), 5.23 (s, 2H, CH2), 6.17 (brs, 1H, NH), 6.42 (d, 1H, H3, J = 5 Hz), 6.52 (d, 1H, H3´ J = 2 Hz), 6.62 (m, 2H, H5´, 6´), 7.33 (dd, 1H, H6, J 1 = 9 Hz, J 2 = 2 Hz), 7.74–7.82 (m, 2H, 5H´´, H5), 7.97 (d, 1H, H8, J = 2 Hz), 8.53 (d, 1H, H2, J = 5 Hz); 13C NMR (25.8 MHz, CDCl3), δ: 31.6, 42.9, 48.8, 55.6, 62.6, 100.3, 106.2, 121.5, 121.7, 123.9, 125.8, 128.5, 132.6, 135.4, 149.2, 151.6, 164.5, 197.7; (EI) m/z (%): 408.15 [M‐C2H3O] (5), 258.07 [C14H17ClN3O2] (16), 207.05 [M‐C12H12N3O3] (16), 191.02 [M‐C13H14N3O3] (70), 179.04 [M‐ C13H14N3O3] (5), 135.09 [C8H7O2] (100), 95.02 [C4H5N3] (9), 91.08 [C6H6O] (46); Anal. Calcd for C23H22ClN5O3: C, 61.13; H, 4.91; N, 15.50. Found: C, 61.13; H, 4.93; N, 15.73.
5. Biology
5.1. Cell Lines
The cancer cell lines used in the cytotoxic assays were acquired from the American Tissue Culture Collection (ATCC) (Manassas, VA, USA) and maintained as described previously [28]. The MRC‐5 and BJ human fibroblasts were used as nontumoral control cells. The (MRC‐5 LD and BJ LD) are also human fibroblast cell lines resistant to doxorubicin. The cell line CCRF‐CEM is derived from T‐lymphoblastic leukemia and is highly chemosensitive. Also, the cell line K562 represents cell samples from a patient with AML that presents Bcr‐Abl translocation. The Raji and Ramos cell lines are derived from B‐cell leukemia. Other cells, such as U2O2, represent a pediatric osteosarcoma; HCT116 is a colorectal tumor cell line; and HCT116p53‐/‐ (Horizon Discovery Ltd., Cambridge, UK) is a similar cell line with its p53 gene knocked down, a model of human cancer frequently associated with poor prognosis. The cells were maintained in Nunc/Corning 80 cm2 plastic tissue culture flasks and cultured in a cell culture medium according to ATCC or Horizon recommendations (DMEM/RPMI 1640/McCoy with 5 g/L glucose, 2 mM glutamine, 100 U/mL penicillin, 100 mg/mL streptomycin, 10% fetal calf serum, and NaHCO3).
5.2. Lymphocytes from Normal Donors
Leukocytes were collected from five healthy donors at the Transfusion Medical Department of Olomouc University Hospital. The cells were isolated using the standard Ficoll–Hypaque technique, as previously outlined in relevant literature [57, 58]. Following isolation, the cells underwent a 72‐h incubation period, as per the established protocol for the standard compound‐screening method used at the Institute of Molecular and Translational Medicine.
5.3. Cytotoxic MTS Assay
The in vitro cytotoxicity of compounds 11–22 was evaluated utilizing the 3‐(4,5‐dimethylthiazol‐2‐yl)‐5‐(3‐carboxymethoxyphenyl)‐2‐(sulfophenyl)‐2H‐tetrazolium (MTS) assay on a robotic platform (High Res BioSolutions) at the Institute of Molecular and Translational Medicine. Cell suspensions were prepared and diluted according to the specific cell type and the anticipated target cell density, which ranged from 25 000 to 35 000 cells/mL and was informed by the cells’ growth characteristics as previously documented [59]. An automatic pipettor was employed to dispense 30 μL of the cell suspension into 384‐well microtiter plates. All compounds under investigation were solubilized in 100% DMSO, and four‐fold serial dilutions of the required test concentrations were introduced into the wells of the microtiter plates as 0.15 μL aliquots at baseline using the Echo550 echo acoustic noncontact liquid handler (Labcyte). The final DMSO concentration in the cell culture was maintained at 0.01%. The assays were performed in technical duplicates, accompanied by a minimum of three biological replicates, to enhance the reliability of the results. The cells were incubated with the tested compounds for 72 h at 37 °C in a 5% CO2 atmosphere with 100% humidity.
At the conclusion of the incubation period, cell viability was assessed using the MTS assay. An aliquot of 5 μL of the MTS stock solution was added to each well, followed by incubation for 1–4 h. Subsequently, the optical density (OD) was measured at 490 nm using an Envision reader (PerkinElmer). Tumor cell survival (TCS) was calculated using the formula: TCS = (OD of drug‐exposed well/mean OD of control wells) × 100%. The IC50 value, indicative of the concentration of the compound required to achieve 50% lethality in tumor cells, was derived from the corresponding dose–response curves using Dotmatics software (updated version 2022, London, UK [60] After a period of 3 days of incubation with cancer cell lines and normal fibroblasts, the minimum inhibitory concentrations (IC50) were determined.
5.4. Spheroid Formation
Spheroid culture aims to analyze the drug's effects on complex structures that resemble solid tumors. The spheroids were prepared using the specific nonadherent plates for spheroid formation (Nunc Sphera, Thermo Fisher, Waltham, MA, USA) according to the manufacturer's simple protocol. The cell lines HCT116 parental, HCT116KOTp53, A549, and U2O2 were cultured at a density of 2500 cells per well using medium containing 10% fetal calf serum and antibiotics: McCoy's 5A medium for HCT116, F‐12K (Kaighn's Modified) for A549, and Dulbecco's modified Eagle medium (DMEM). The cells were cultured for 48 h as recommended by the manufacturer and as described by Suárez et al. [60]. Spheroids were also made using BJ and MRC‐5 fibroblasts, using 3000 cells per well.
5.5. Spheroid Viability Assay
Cell viability of the treated spheroids was assessed using the CellTiter‐Glo 3D kit (Promega Corporation, Madison, WI, USA). The kit is designed to measure ATP as an indicator of viability, generating a luminescent readout that is more sensitive than colorimetric or fluorescence‐based methods. The spheroids were cultivated with compounds at concentrations ranging from 100 pM to 50 μM in triplicate for 72 h, and the luminescence was measured using the Enspire apparatus (PerkinElmer). A standard curve was performed for each analysis as recommended by the manufacturer. Cisplatin (Src tyrosine kinase inhibitor), dasatinib (BCR‐ABL kinase inhibitor), sorafenib (growth factor‐related tyrosine kinase inhibitor), quercetin (PKA inhibitor), and fosfatinib (Syk kinase inhibitor) were used as controls.
Morphological assessment of spheroids was performed under the inverted microscope using grids every 12 h. Only changes in spheroid size were observed during the process, which were less pronounced than the quantified ATP release.
5.6. Apoptosis Quantification
Apoptosis was assessed utilizing the Human Cleaved Caspase‐3 (Asp175) ELISA Kit (Abcam) on cell culture extracts obtained from each treatment group, in accordance with the manufacturer's guidelines. Absorbance was measured using an Enspire apparatus (PerkinElmer) at 450 nm.
5.7. Production and Purification of the Isoform α of the Recombinant Mouse PKA Catalytic Subunit
Escherichia coli BL21 (DE3) cells were transformed with the pRSETB PKA Cat expression vector (Plasmid #14920, Addgene), which was kindly provided by Dr. Susan S. Taylor, University of California, San Diego, USA. pRSETB PKA Cat is a bacterial expression vector that has been engineered to contain and express the gene construct for the full‐length M. musculus isoform α of the catalytic subunit of PKA (Cα). The Cα subunit was expressed in bacteria using LB medium supplemented with ampicillin (100 μg/mL). Bacterial cells were grown at 37 °C with shaking until cultures reached mid‐log phase (OD600 nm = 0.6–0.7), and protein expression was initiated by adding IPTG (0.5 mM). Broth cultures were incubated overnight with shaking, and cells were harvested by centrifugation (10000×g for 30 min at 4 °C).
The Cα subunit was purified by loading the bacterial soluble fraction on a CM Sepharose Fast Flow (Sigma) column. After washing the resin thoroughly with the equilibration buffer [30 mM 2–(N‐morpholino)ethanesulfonic acid, 1 mM EDTA, pH 6.5], the Cα subunit was eluted using a linear gradient of 0–0.5 M KCl in the same buffer. Two‐milliliter fractions were collected, and their absorbance was measured at 280 nm. The protein's purity was analyzed by SDS‐PAGE [61]. Fractions containing the pure Cα subunit were pooled, concentrated, and stored at –40 °C in the presence of 20% glycerol.
5.8. Protein Kinase Activity Assay
Kinase activity of the purified recombinant PKA catalytic was determined using an electrophoretic gel‐shift nonradioactive assay [62]. A synthetic heptapeptide known as kemptide (sequence: LRRASLG) was fluorescently labeled with fluorescamine and employed as a substrate [63]. Reaction mixtures were separated by electrophoresis on a 1% agarose gel, and the gels were visualized under a phototransilluminator using UV light.
5.9. Effect of Compounds 11–22 on the Enzymatic Activity of the Cα Subunit
Kinase activity was measured following incubation of the PKA Cα subunit with various concentrations (0–10 µM) of the synthesized Click compounds dissolved in DMSO. Each experiment was performed in triplicate. Detected fluorescent bands were quantified by densitometry using ImageJ. The IC50 (half‐maximal inhibitory concentration) was determined by fitting a nonlinear regression to the normalized data using GraphPad Prism 5.0. Additionally, the purified Cα subunit was incubated with 5 mM ATP and 50 mM MgCl2 prior to use to evaluate whether MgATP protected against the enzyme's inhibition by the Click compounds.
5.10. Molecular Docking
Protein–ligand docking simulations were carried out using the CB‐Dock2 web server (https://cadd.labshare.cn/cb‐dock2/). The target protein structure was obtained from the Protein Data Bank (PDB ID: 4NTS, PDB DOI: https://doi.org/10.2210/pdb4NTS/pdb), which corresponds to the apoenzyme structure of the M. musculus PKA catalytic subunit, and the molecular structures were drawn using ChemDraw (version 23.0, PerkinElmer, Inc.). Docking was conducted by uploading the protein and ligand files to the CB‐Dock2 server. The “Auto Blind Docking” option was selected to automatically detect potential binding cavities and run docking simulations.
Redocking of two cocrystallized inhibitors of the PKA Cα subunit, STU from PDB ID: 1STC and BLU0588 from PDB ID: 9PC1, was employed to validate the docking protocol. For each crystal structure, the cocrystallized ligand was extracted from the receptor, and the receptor was prepared following the same procedure adopted for the docking calculations of the synthesized compounds. The ligands were then independently redocked into the ATP‐binding pocket using AutoDock Vina with the same parameters used for the synthesized compounds. The corresponding docking poses were superimposed onto their respective crystallographic conformations using PyMOL, and the RMSD between the heavy atoms of the crystallographic and redocked ligands was calculated to assess the accuracy of the docking protocol.
5.11. Statistical Analysis
The Dotmatics software (Updated version 2022, London, UK) was used for the IC50 calculations, as described previously. The different assays were analyzed using GraphPad software version 10, employing Student's t‐test and one‐way ANOVA [64].
Funding
This study was supported by Ministerio de Ciencia y Tecnología (Grant 2023PGP99) and National Institute for Cancer Research (Grant LX22NPO5102 and TN02000109).
Conflicts of Interest
The authors declare no conflicts of interest.
Supporting information
Supplementary Material
Acknowledgments
The authors acknowledge the Instituto de Investigaciones Farmacéuticas de la Facultad de Farmacia, Universidad Central de Venezuela. This work was supported by the Ministerio de Ciencia, Tecnología e Innovación de Venezuela (grant no. 2023PGP99). All biological parts of the study were supported in part by the infrastructural projects (CZ‐OPENSCREEN – LM2023052; EATRIS‐CZ – LM2023053), the Czech biobank network (BBMRI ‐ LM2023033), and the projects National Institute for Cancer Research (Program EXCELES, ID Project No. LX22NPO5102) Funded by the European Union – Next Generation EU from the Ministry of Education, Youth and Sports of the Czech Republic (MEYS), project TN02000109 (Personalized Medicine: From Translational Research into Biomedical Applications is co‐financed with the state support of the Technology Agency of the Czech Republic as part of the National Centers of Competence Program).
Contributor Information
Juan Bautista De Sanctis, Email: juanbautista.desanctis@upol.cz.
Jaime E. Charris, Email: jaime.charris@ucv.ve.
Data Availability Statement
The data that support the findings of this study are available on request from the corresponding author. The data are not publicly available due to privacy or ethical restrictions.
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Supplementary Material
Data Availability Statement
The data that support the findings of this study are available on request from the corresponding author. The data are not publicly available due to privacy or ethical restrictions.
