Abstract
Obesity and high-fat diet (HFD) consumption are associated with cognitive decline and increased risk of neurodegenerative disorders, including Alzheimer’s disease (AD). Gut microbiota dysbiosis is a key factor for obesity-related brain dysfunctions. Opuntia ficus-indica fruit (OFIF) has shown beneficial metabolic and neuroprotective effects, but the contribution of the gut microbiota has not been explored yet. This study investigated whether OFIF exerts neuroprotective effects in HFD mice through microbiota-dependent mechanisms. C57BL/6 mice were fed a standard diet or HFD for 16 weeks, with or without OFIF supplementation. A subgroup of HFD + OFIF mice received a broad-spectrum antibiotic cocktail to deplete gut microbiota. Metabolic parameters, cognitive performance, brain morphology, AD–related gene expression (PCR array), and gut microbiota composition were assessed. OFIF supplementation improved insulin resistance in HFD-mice, also in the presence of antibiotics, suggesting microbiota-independent metabolic benefits. In contrast, OFIF prevented HFD-induced reduced brain weight, neuronal damage, and partially restored cognitive impairment, effects that were abolished following microbiota depletion. At the molecular level, OFIF modulated the expression of multiple AD-related genes in the cortex and hippocampus, including pathways involved in amyloid processing, synaptic function, and lipid metabolism. These transcriptional changes were absent in antibiotic-treated mice. Microbiota analysis revealed that OFIF positively modulated gut microbiota composition, leading to enrichment of genera such as Duncaniella and Paramuribaculum, which positively correlated with brain structural. In conclusion, our findings suggest that microbiota is a critical mediator of OFIF-driven brain protection and supports the potential of OFIF as a dietary strategy to counteract obesity-associated cognitive decline.
Keywords: gut microbiota, high-fat diet, neuroprotection, obesity, Opuntia ficus-indica
1. Introduction
Accumulating evidence suggests that aging individuals with obesity develop cognitive impairment and susceptibility to Alzheimer’s disease (AD) (1). Indeed, the consumption of a high fat diet (HFD) is involved not only in obesity development and its related dysfunctions, but also it impacts the brain health (2). Nowadays, intake of saturated fat rich diet is widely considered as a driving factor for cognitive impairment and AD development (3). AD is a neurodegenerative disorder characterized by progressive cognitive decline and memory impairment (4). The neuropathological hallmarks of AD include amyloid-β (Aβ) accumulation resulting from amyloid precursor protein (APP) cleavage via β-site APP-cleaving enzyme 1 (BACE1) and γ-secretase, synaptic loss, and the deposition of hyperphosphorylated tau protein forming neurofibrillary tangles in the cerebral cortex and hippocampus (5). Aging, genetic and environmental factors contribute to alterations that shift APP cleavage toward the amyloidogenic pathway rather than the normal non-amyloidogenic secretory process (5). In addition, a variety of factors including acetylcholine deficiency, glutamate imbalance, oxidative stress, neuroinflammation, insulin resistance, mitochondrial dysfunction, cholesterol homeostasis, gut dysbiosis are implicated in AD pathogenesis (6).
Increasing evidence emphasizes that cognitive decline should be considered a major consequence of living in an obesogenic environment (7). In healthy rodents, HFD disrupts performance in learning and memory tasks and, in some cases, induces AD-like pathological changes (8–12). Therefore, HFD-fed mice for a long period represent a good experimental model to understand the link between obesity and neuronal damage leading to neurodegeneration/AD and to explore the potential of neuroprotective substances. Insulin resistance, oxidative stress, neuroinflammation, mitochondrial dysfunction, gut dysbiosis, all key consequences of obesity, are thought to interact and contribute to the neurodegenerative conditions and cognitive decline seen in AD (13). Moreover, increasing evidence highlights the gut–brain axis as a central mechanism linking obesity to neurological outcomes (14). Indeed, HFD-induced obesity disrupts gut microbial homeostasis, leading to decreased microbial diversity, enrichment of pro-inflammatory species, and reduced synthesis of health-promoting metabolites. Such alterations in gut microbiota composition are now considered major contributors to AD-like cognitive deficits (14). Accordingly, targeting the intestinal microbiota in obese individuals may offer a promising therapeutic strategy for the management of obesity and its associated metabolic disorders (15).
Recently, we demonstrated that 4-week supplementation with lyophilized yellow prickly pear fruit (Opuntia ficus-indica fruit; OFIF) improves glucose metabolism and it counteracts insulin resistance in HFD mice (16). Moreover, administration of OFIF at a dose of 14 mg/kg for 1 month in HFD-fed rats attenuates obesity-associated cognitive impairments and metabolic dysfunctions (17). However, whether long-term dietary supplementation with the whole fruit provides sustained neuroprotection throughout chronic obesogenic feeding remains unknown. Moreover, the contribution of the gut microbiota to the effects of OFIF on brain homeostasis has not yet been investigated.
Therefore, the aim of the present study was to determine whether long-term OFIF alleviates HFD-induced gut dysbiosis, cognitive performance, and neurodegeneration/AD associated pathological features. To this end, mice were aged and fed an HFD supplemented with OFIF for 16 weeks, and a subset of animals were treated with a broad-spectrum antibiotic cocktail to abrogate the gut microbiota and thereby assess microbiota role in mediating the effects of OFIF.
2. Materials and methods
2.1. Animals and diet
Male mice of the C57BL/6 strain, purchased at 4 weeks of age from Envigo Laboratories (S. Pietro al Natisone, Udine, Italy), were used in the present study. The animals (n = 32) were housed in the Advanced Technologies Network (ATeN) animal facility under controlled environmental conditions, including 12 h light/12 h dark cycle, constant temperature (22 ± 2 °C) and relative humidity (55% ± 5%) with ad libitum access to food and water. All animal housing procedures and experimental protocols were conducted in accordance with Italian Legislative Decree No. 26/2014 and the European Directive 2010/63/EU for animal experimentation and were approved by the Italian Ministry of Health (Authorization No. 395/2024-PR, issued on May 6, 2024).
The preparation of lyophilized Opuntia ficus-indica fruit powder (OFIF) was obtained from the yellow cultivar of Opuntia ficus-indica grown in San Cono (Sicily). The fruits were peeled, finely chopped, and weighed. Subsequently, 100 g of pulp were homogenized and lyophilized in the presence of 2.5% food-grade β-cyclodextrin.
After 1 week of acclimatization, mice (two animals per cage) were assigned to four experimental groups (n = 8 per group), fed for 16 weeks as follows: the STD group received a standard diet (20% protein, 70% carbohydrates, 10% fat; ref. 4RF25, Mucedola, Milan, Italy); the HFD group received a high-fat diet (20% protein, 20% carbohydrates, 60% fat; PF4215, Mucedola, Milan, Italy); the HFD + OFIF group received the HFD supplemented with lyophilized Opuntia ficus-indica fruit (12 g/kg diet); and the HFD + ATB + OFIF group received the HFD supplemented with OFIF and an antibiotic cocktail administered in drinking water (ampicillin 1 g/L, neomycin 1 g/L, vancomycin 0.25 g/L, and metronidazole 1 g/L). Antibiotic treatment was maintained throughout the experimental period to deplete the gut microbiota. The OFIF-supplemented diet was custom-prepared by Mucedola and was isocaloric with the HFD. The dose of OFIF (12 g/kg diet) was chosen based on a nutritionally relevant human intake of the fruit (four fruits/day, corresponding to 75 g of lyophilized product) and normalized to the average daily food intake of mice. Body weight and food intake were recorded weekly throughout the 16-week experimental period. At the end of the study duration, blood glucose concentration was measured from a drop of blood collected from the tail vein using a glucometer (Gluco-Men LX meter, Menarini, Florence, Italy) in overnight fasting mice. Subsequently, animals were weighed and sacrificed. Intracardiac blood samples were collected, and brains were excised and weighed. Blood was centrifuged at 3,000 rpm for 15 min at 4 °C to obtain plasma that was stored at −80 °C. Brain samples were then processed as follows: a cerebral portion was coronally sectioned, fixed in formalin, and used for histological analyses; the remaining tissue was dissected to separate cortex and hippocampus, stored in sterile Eppendorf tubes, and frozen at −80 °C for subsequent biomolecular analyses. Moreover, 6 h prior to sacrifice, mice were individually housed in sterile cages, and approximately 300 mg of fresh fecal samples were collected from each animal. Samples were immediately stored at −80 °C for subsequent analyses.
2.2. Determination of plasma insulin
Plasma insulin concentration was determined using a commercially available Enzyme-Linked Immunosorbent Assay (ELISA) kit (Mercodia, Sylveniusgatan 8A, Uppsala, Sweden), according to the manufacturer’s instructions. Insulin resistance was assessed by calculating the HOMA index (HOMA-IR) using the following formula: HOMA-IR = [fasting insulin concentration (mU/L) × fasting glucose concentration (mg/dL) × 0.05551]/22.5.
2.3. Histological analysis of the cortex
Cortical tissue samples were fixed in 4% formaldehyde in phosphate-buffered saline (PBS), dehydrated in graded ethanol solutions (70, 80, 96%), cleared in xylene and embedded in paraffin blocks, that were allowed to solidify at room temperature. Sections of 5 μm thickness were obtained using a rotary microtome (YIDI YD315, Jinhua, Zhejiang, China) and mounted on glass slides. Hematoxylin and eosin (H&E) staining was performed on fixed, paraffin-embedded mouse brain sections according to standard histological procedures to obtain a morphological evaluation of brain tissue architecture. Stained sections were examined using a light microscope (Leica DMLB, Meyer Instruments, Houston, TX, United States) equipped with a digital camera (DS-Fi1, Nikon, Florence, Italy). Viable and dead neurons were quantified in three images per sample captured at 200 × magnification. Neurons were classified as viable based on preserved morphology, defined by the presence of a clearly visible nucleus and nucleolus, along with lightly stained cytoplasm. Dead neurons were identified by intense cresyl violet staining, absence of a distinct nucleolus, and the presence of pericellular vacuolation. Cell counts were performed in a blinded manner by two independent investigators using NIS-Elements Basic Research (Nikon, Florence, Italy). The average of the counts was calculated and expressed as the percentage of viable cells per area according to the following formula: % viable cells = [viable cells/(viable cells + dead cells)].
2.4. RT2 profiler PCR array
Gene expression changes in cortex and hippocampus of mice belonging to four animal groups were assessed using the Mouse Alzheimer’s Disease RT2 Profiler PCR Array (PAMM-057Z, Qiagen, Monza, Italy) in a 96-wellplate format. Each array probes 84 pathway-related genes, 5 housekeeping reference genes (Actb, B2m, Gapdh, Gusb, Hsp90ab1), 1 mouse genomic DNA contamination control, 3 reverse transcription controls (to check reverse transcription efficiency) and 3 PCR positive controls (to assess array reproducibility). Tissues were homogenized with a hand-held homogenizer, and total RNA was extracted using the PureLink™ RNA Mini Ki (Invitrogen™, Thermo Fisher Scientific, Waltham, MA, United States). To synthesize cDNA, 0.5 μg RNA was reversed transcribed using the RT2 First Strand Kit (Qiagen, Monza, Italy #330404). PCR reactions were performed according to manufacturer’s instructions and run on a QuantStudio™ 3 Real-Time PCR System (Applied Biosystems™, Thermo Fisher Scientific, Waltham, MA, United States). Analysis of gene expression data was performed using Qiagen’s online platform (RT2 Profiler PCR Arrays & Assays Data Analysis software).1 All genes were normalized to a minimum of three reference genes. Data showing at least a two-fold change with a p ≤ 0.05 were considered significant. Validation of the RT2 PCR Array results was performed by real-time PCR with predesigned primers for Abca1, Apbb2, Apbb1, and Bche purchased from Qiagen (Monza, Italy, assay IDs: QT00165690, QT00111125, QT00125433, QT01057154).
2.5. Behavioral assessment
The Open Field (OFT) and Object Recognition (ORT) tests were evaluated using behavioral tracking software (AnyMaze, Version 7.20) and analyzed by a trained scientist who was unaware of the experimental grouping. The OFT was employed to assess locomotor and exploratory behavior of the animals following established protocols (17–19). Mice were introduced into a square open field maze (44.5 × 44.5 cm), positioned facing the wall from a distance of 10 cm and were subsequently recorded for a duration of 10 min. Recorded activity parameters included Total distance covered, Immobility time and Number of line crossings. The Object Recognition test (ORT) is a reliable and widely employed method for evaluating learning and memory by assessing the declarative memory system in experimental models (17, 18). Initially, rodents were habituated to the arena (open field maze with the same characteristics as in OFT). On the test day, animals were presented with two identical objects placed at a fixed distance from each other. Following a 1-h retention period, one of the two objects was replaced with a novel one, while the other remained unchanged (“familiar object”). The objects were selected and 3D printed based on specific literature pertaining to this paradigm (20). The amount of time the animals spent exploring each object was tracked. In assessing the ORT, we considered the Total exploration time, the Exploration index (calculated as Latency (s) to the first investigation of the New Object divided by the total number of investigations of the New object + number of investigations of the Known object) and the Recognition index (RI%, representing the time spent exploring the novel object relative to the total time spent investigating both the familiar and novel one). Moreover, after a further 24-h retention period, one of the two objects (the familiar or the new one) presented during the 1-h retention test was replaced with a completely novel one, exploring the ability to retain information 24 h after the object presentation.
2.6. Gut microbiota composition
For gut microbiota analysis, faucal samples were collected from mice and stored at −80 °C until processing. Genomic DNA was extracted using the DNeasy® 96 PowerSoil Pro Kit (Qiagen, Hilden, Germany) on the QIAcube HT automated platform, following the manufacturer’s protocols. The V3-V4 region of the 16S rRNA gene was amplified via PCR with modified primers described by Takahashi et al. (21). Amplicons were purified using Thermolabile Exonuclease I (New England Biolabs, Ipswich, MA, United States), diluted (1:2), and indexed with Nextera XT Index Kit (Illumina, San Diego, CA, United States). Libraries were normalized using the SequalPrep Normalization Kit (Thermo Fisher Scientific, Waltham, MA, United States), pooled, and further purified with Agencourt AMPure XP magnetic beads (Beckman Coulter, Brea, CA, United States). Sequencing was performed on the MiSeq platform (Illumina, San Diego, CA, United States) using V3 chemistry (2 × 300 bp paired-end reads). Sequencing data were processed using QIIME 2 (version 2023.7). Primer sequences were removed using Cutadapt (v.2023.7), and reads were denoised with DADA2 to generate amplicon sequence variants (ASVs). Taxonomic classification was performed using the SILVA v138 and GreenGenes2 v2022.10 reference databases.
2.7. Statistical analysis
The results are reported as mean ± Standard Error of the Mean (SEM). Statistical analyses were conducted by ANOVA, followed by Bonferroni’s multiple comparison post-hoc test using Prism 6.0, GraphPad (San Diego, CA, United States). Associations between fecal bacterial profiles and brain atrophy indices, hippocampal and cortical gene expression were assessed using Spearman’s rank correlation. Spearman’s rank correlation p-values were adjusted for multiple comparisons using the Benjamini–Hochberg false discovery rate correction. A p < 0.05 was considered indicative of statistical significance.
3. Results
3.1. Effects of OFIF on body weight, food intake and glucose homeostasis
At the beginning of the feeding period, no significant differences in mean body weight were observed among the four experimental groups (STD, HFD, HFD + OFIF, and HFD + ATB + OFIF; Figure 1A). After 16 weeks of dietary intervention, body weight gain was significantly higher in all groups fed HFD compared with the STD group (Figure 1B). Caloric intake differed significantly between the STD and HFD groups; however, mice feeding HFD supplemented with OFIF or OFIF plus antibiotics assumed a similar amount of kilocalories compared with mice fed the HFD alone (Figure 1C).
Figure 1.
The impact of OFIF on body weight, caloric intake, and glucose homeostasis in the different groups of mice. The graphs present (A) the body weight of the animals during the experimental period; (B) the final body weight gain; (C) the average caloric intake per mouse; (D) plasma fasting glucose concentration (mg/dL); (E) plasma fasting insulin levels (μg/L); (F) HOMA-IR. Data are presented as mean ± SEM (n = 8). *p < 0.05, ***p < 0.001 versus the STD group; #p < 0.05, ##p < 0.01, ###p < 0.001 versus the HFD group; $p < 0.05 versus the HFD + OFIF group.
Moreover, the HFD group exhibited significantly higher fasting glycaemia, insulin concentration, and Insulin resistance index (HOMA-IR) compared with the STD group (Figures 1D–F). In contrast, insulin levels and the HOMA-IR were significantly lower in both the HFD + OFIF and HFD + ATB + OFIF groups compared with the HFD group (Figures 1D–F).
3.2. Effects of OFIF on brain weight
Brain weights and the brain-to-body weight ratio were significantly lower in HFD mice compared to the STD group (Figures 2A,B). In contrast, both parameters in HFD + OFIF mice were comparable to those of STD mice. No improvement in reduction of brain weight was observed in antibiotics-treated mice. Histological examination of cortical sections revealed well-preserved brain architecture in the STD group, with high neuronal density (Figure 2C). In contrast, the HFD group exhibited clear hallmarks of neurodegenerative damage, including a reduced number of neurons, neuron disorganization, presence of vacuolization, some pyknotic nuclei and hypereosinophilic cytoplasm. Interestingly, mice receiving OFIF displayed a significant reduction in HFD-induced damage. The neuronal density and organization were better preserved than in the HFD group and more closely resembled those of the STD mice, suggesting a neuroprotective effect of OFIF. Conversely, group treated with antibiotics to deplete gut microbiota showed no evident improvement in the HFD-associated alterations, showing neurons with hypereosinophilic cytoplasm and pyknotic nuclei, consistent with ongoing neurodegeneration.
Figure 2.
Impact of OFIF on cerebral cortex morphology in the different groups of mice. (A) Brain weight and (B) brain index (brain weight/body weight ratio), (C) cortical morphology (yellow arrows indicate viable cells and black arrows indicate dead cells), (D) histograms of the percentages of intact neurons in cortex areas in the different groups of mice (n = 8). Data are presented as mean ± SEM from each group. *p < 0.05 and ***p < 0.001 versus the STD group; #p < 0.05 and ##p < 0.01 versus the HFD group; ###p < 0.001 versus the HFD group; $p < 0.05 versus the HFD + OFIF group. Haematoxylin and eosin (H&E) staining was used to visualize the morphological changes of nerve cells in the cerebral cortex (20x).
3.3. Effects of OFIF on cognitive performances
To evaluate the impact of OFIF on cognitive function in obese mice, behavioral assessments were performed using the open field test (OFT) and the object recognition test (ORT). In the OFT, spontaneous locomotor activity and exploratory behavior were assessed by measuring total travelled distance, immobility time, and number of line crossings. Chronic HFD administration significantly impaired locomotor activity, as evidenced by the marked reduction in total travelled distance in HFD mice compared with STD controls (Figure 3A). OFIF supplementation partially restored locomotor performance, although the effect did not reach statistical significance relative to the HFD group (Figure 3A). Notably, HFD + ATB + OFIF mice exhibited markedly reduced locomotion compared with HFD + OFIF animals (Figure 3A). Similarly, HFD mice displayed a pronounced increase in immobility time compared with STD controls, suggesting reduced spontaneous exploratory activity (Figure 3B). OFIF supplementation significantly reduced immobility time relative to HFD mice (Figure 3B). Interestingly, antibiotic treatment did not abolish this beneficial effect, as HFD + ATB + OFIF mice maintained low immobility levels (Figure 3B). Consistent with the total distance data, the number of line crossings was significantly reduced in HFD and HFD + ATB + OFIF mice compared with STD controls (Figure 3C). Although OFIF supplementation improved exploratory activity, this effect did not reach statistical significance (Figure 3C).
Figure 3.
Impact of OFIF on cognitive performance in the different groups of mice. Open field test showing (A) total distance travelled; (B) immobility time and (C) number of line crossings. Novel object recognition test showing (D) total exploration time (E) exploration index; (F) recognition index (%) after a 1 h retention interval and (G) total exploration time, (H) exploration index; (I) recognition index (%) after a 24 h retention interval. Data are presented as mean ± SEM (n = 8). *p < 0.05, **p < 0.01 and ***p < 0.001 versus the STD group; #p < 0.05, ##p < 0.01 and ###p < 0.001 versus the HFD group; $p < 0.05 and $$$p < 0.001 versus HFD + OFIF group.
To evaluate short- and long-term recognition memory, mice were subjected to the ORT at 1 h and 24 h after training. HFD-fed mice showed an overall reduction in object exploratory behavior, which reached statistical significance only at the 24 h retention time (Figures 3D,G). OFIF supplementation significantly increased total exploration time compared with the HFD group at both retention intervals (Figures 3D,G). In contrast, HFD + ATB + OFIF mice displayed a marked reduction in exploration time relative to HFD + OFIF animals (Figures 3D,G). Analysis of recognition memory performance revealed a severe cognitive impairment in HFD mice, as demonstrated by the significant reduction in exploration index compared with STD controls at both retention times (Figures 3E,H), indicating impaired discrimination of the novel object. OFIF supplementation significantly improved the exploration index, restoring values toward those observed in STD mice (Figures 3E,H). Antibiotic treatment attenuated this beneficial effect, with HFD + ATB + OFIF mice showing a lower exploration index than HFD + OFIF animals, reaching statistical significance at the 24 h retention interval (Figures 3E,H). Similarly, recognition index (RI%) was significantly decreased in HFD mice compared with STD controls at the 1 h retention interval, confirming impaired recognition memory (Figure 3F). OFIF supplementation did not improve RI% at both retention intervals (Figures 3F,I). Moreover, microbiota depletion in HFD + ATB + OFIF mice further impaired memory retention compared with the HFD + OFIF group (Figures 3F,I).
3.4. OFIF on Alzheimer’s disease gene expression profiles
Based on the observed differences in brain morphology and cognitive functions, we performed PCR array analyses to investigate potential changes in the expression of Alzheimer’s disease-related genes in the cortex and hippocampus of the different experimental groups. In the cortex, HFD mice displayed a distinct transcriptional profile compared with STD animals, with dysregulation of several genes involved in Aβ metabolism, synaptic function, lipid metabolism, transcriptional regulation, and neuronal signaling (Figures 4A,C). Relative to HFD mice, HFD + OFIF animals showed significant modulation of 38 genes, including 28 upregulated and 10 downregulated genes. The modulated genes mainly belonged to pathways related to Aβ metabolism (A2m, Apbb1, Apbb2, Bace2, Bche, Ctsb, Ctsl, Clu, Gsk3b, Plat, Plau, Plg, Aplp1, Lrp6, Lrp8, Psen1), synaptic function (Apba1, Chat, Sncb, Gap43), lipid metabolism (Abca1, Apoa1), transcriptional regulation (Ep300, Nae1), and neuronal signaling (Prkcb, Prkcg, Insr, Gnaz, Gnb2, Gnb5, Gng4, Gng8, Gng10, Gng11, Gngt1, Gngt2, Ide, Igf2) (Figures 4A,C). In contrast, in HFD + ATB + OFIF mice, the expression profile of most of these genes was comparable to that observed in HFD mice, suggesting that the transcriptional effects induced by OFIF in the cortex may be largely dependent on the presence of the gut microbiota (Figures 4A,D). HFD also induced significant transcriptional alterations compared with STD mice in the hippocampus (Figures 4B,E). Relative to HFD control animals, HFD + OFIF mice showed significant changes in the expression of 11 genes. Among these, six genes were upregulated (Abca1, Apba1, Apbb2, Aplp1, Gng8, and Gngt2), while five genes were downregulated (Apbb1, Aph1a, Bche, Ctsb, and Ctsl) (Figures 4B,E). Notably, antibiotic treatment markedly attenuated all these transcriptional changes, with HFD + ATB + OFIF mice displaying gene expression levels comparable to those of HFD animals (Figures 4B,F). These data further support a role for the gut microbiota in mediating the hippocampal gene expression changes induced by OFIF. To validate the PCR array results, the expression of four selected genes (Abca1, Apbb1, Apbb2, and Bche) was assessed by quantitative real-time PCR in the cortex and hippocampus. Consistent with the array data, Apbb1 and Bche were significantly upregulated, whereas Abca1 and Apbb2 were downregulated in the HFD and HFD + ATB + OFIF group compared to STD. Notably, treatment with OFIF reversed these alterations, restoring gene expression levels toward STD values (Supplementary Figure S1).
Figure 4.
Impact of OFIF on Alzheimer’s disease gene expression profiles in different groups of mice (n = 3). Heat maps showing clustering of relative gene expression across all tested samples in the (A) cortex and (B) hippocampus; rows represent individual genes and columns represent individual biological samples. Bar graphs showing representative genes with at least a 2-fold change in expression in HFD + OFIF mice compared with HFD control mice in the (C) cortex and (E) hippocampus, and in HFD + OFIF mice compared with HFD + ATB + OFIF mice in the (D) cortex and (F) hippocampus. Heat map generation and fold-change analyses were performed using GeneGlobe’s online platform (RT2 Profiler PCR Data Analysis).
3.5. OFIF and gut microbiota
Analysis of fecal bacterial communities revealed that mice fed STD exhibited significantly higher microbial α-diversity, as assessed by Observed features and the Shannon index, compared with the HFD group, whereas no significant differences were detected between the two groups using the Pielou evenness index (Figures 5A–C). No significant differences in α-diversity indices were observed between HFD and HFD + OFIF mice (Figures 5A–C). In contrast, as expected, treatment with broad-spectrum antibiotics profoundly altered the gut microbiota, resulting in a marked reduction of α-diversity in HFD + ATB + OFIF mice compared with all other experimental groups (Figures 5A–C).
Figure 5.
Impact of OFIF on gut microbiota composition in the different groups of mice. Alpha diversity of the gut microbiota in mice measured by (A) observed features, (B) Shannon index, and (C) Pielou evenness; (D) PCoA of each fecal sample bacterial profile; (E) composition of the gut microbiota at phylum level; (F) ratio of firmicutes to bacteroidetes. Data are presented as mean ± SEM (n = 8) *p < 0.05, ***p < 0.001 versus STD mice; ###p < 0.001 versus HFD group; $$$p < 0.001 versus HFD + OFIF.
Principal component analysis (PCoA) based on amplicon sequence variant (ASV) abundance profiles revealed distinct clustering of gut microbial communities among experimental groups. Specifically, the STD group clustered separately from all HFD-fed groups, while antibiotic treatment shifted the microbial composition away from both STD and HFD clusters (Figure 5D), indicating a substantial alteration of community structure.
At the phylum level, mice fed HFD displayed a gut microbiota dominated by Firmicutes, Bacteroidota, and Verrucomicrobia, with lower relative abundances of Actinobacteria, Proteobacteria, Tenericutes, and Deferribacteres (Figure 5E). Compared with the HFD group, STD fed mice exhibited lower relative abundances of Firmicutes and Verrucomicrobia and a higher abundance of Bacteroidota. Similarly, HFD + OFIF mice showed a significant reduction in Firmicutes and an increase in Bacteroidota and Verrucomicrobia relative to HFD mice (Figure 5E), resulting in a decreased Firmicutes/Bacteroidota ratio (Figure 5F). The relative abundances of minor phyla, including Actinobacteria, Proteobacteria, Tenericutes, and Deferribacteres, remained low across groups and did not show evident changes between STD, HFD and HFD + OFIF mice (Figure 5E).
To further investigate changes in bacterial abundance induced by OFIF supplementation, we performed a population-level analysis of microbiota composition with bias correction (ANCOM-BC) at the genus level and visualized differential abundance between HFD and HFD + OFIF groups using a volcano plot (Figure 6).
Figure 6.
Volcano plot showing bacterial taxa identified by ANCOM-BC between the HFD + OFIF and HFD groups. The x-axis represents the log2 fold change between groups, while the y-axis represents the −log10(p-value). Each point corresponds to a bacterial taxon and significantly different taxa (p < 0.1) are highlighted and colored according to their phylum. Among these, 15 taxa could be confidently assigned at the genus level and are labelled in the figure. Significant unclassified or unidentified taxa are also displayed but are not labelled.
ANCOM-BC identified several bacterial taxa with significantly different abundances between HFD and HFD + OFIF mice. Among these, 15 could be confidently assigned at the genus level and were therefore considered for genus-level interpretation (Figure 6). Genera enriched in the HFD + OFIF group, appearing on the left side of the volcano plot, included Duncaniella, Muribaculum, Paramuribaculum, Bacteroides, Parabacteroides, Akkermansia, Anaerotruncus, Mucispirillum, Escherichia, and Sporofaciens. In contrast, genera enriched in the HFD group, appearing on the right side of the volcano plot, included Clostridium, Dorea, Frisingicoccus, Schaedlerella, and Romboutsia.
To explore whether changes in gut microbiota induced by OFIF supplementation were associated with neural and molecular outcomes, Spearman correlation analyses were performed between the 15 bacterial genera differentially abundant between HFD and HFD + OFIF mice and brain weight indices as well as hippocampal and cortical gene expression.
Genera enriched in the HFD + OFIF group generally showed positive associations with brain weight, brain index and cortical cell viability, whereas genera enriched in the HFD group were predominantly negatively correlated with these cerebral parameters (Figure 7). Among the OFIF-enriched genera, Duncaniella and Paramuribaculum exhibited the strongest positive associations with brain structural indices.
Figure 7.

Heatmap displaying the Spearman correlation between microbiota genera significantly differing between HFD + OFIF and HFD groups and brain weight indices. The colors range from red (positive correlation) to blue (negative correlation). BW, brain weight; BI, brain index; VC, percentage of viable cells. Significant associations are shown with asterisks: ****p < 0.001, ***p < 0.01, **p < 0.05, *p < 0.1 adjusting by false discovery rate.
Correlations analyses with cortical gene expression revealed distinct association patterns between bacterial genera and genes involved in Aβ metabolism, lipid metabolism, transcriptional regulation, and synaptic function/neuronal signaling (Figure 8). In particular, Duncaniella and Paramuribaculum, enriched in the HFD + OFIF group, showed widespread correlations with genes across these functional categories, whereas Clostridium, enriched in the HFD group, displayed correlations in the opposite direction, particularly with genes related to Aβ metabolism.
Figure 8.
Heatmap displaying the Spearman correlation between microbiota genera significantly differing between HFD + OFIF and HFD groups and cortical gene expression. The colors range from red (positive correlation) to blue (negative correlation). Genes are grouped in five functional subclasses, Aβ metabolism, synaptic function, lipid metabolism, transcriptional regulation, and neuronal signaling. Significant associations are shown with asterisks: ****p < 0.001, ***p < 0.01, **p < 0.05, *p < 0.1 adjusting by false discovery rate.
Similarly, correlations with hippocampal gene expression demonstrated that OFIF-enriched genera, particularly Duncaniella, Muribaculum, and Paramuribaculum, were associated with genes involved in Aβ metabolism and neuronal signaling, while HFD-enriched genera exhibited an opposite correlation pattern. In addition, several HFD-enriched genera showed positive correlations with Bche (Figure 9).
Figure 9.
Heatmap displaying the Spearman correlation between microbiota genera significantly differing between HFD + OFIF and HFD groups and hippocampal gene expression. The colors range from red (positive correlation) to blue (negative correlation). Genes are grouped in three functional subclasses, Aβ metabolism, lipid metabolism and neuronal signaling. Significant associations are shown with asterisks: ****p < 0.001, ***p < 0.01, **p < 0.05, *p < 0.1 adjusting by false discovery rate.
4. Discussion
The present study provides evidence for sustained neuroprotective effects by supplementation with OFIF in HFD mice and for a key role of the gut microbiota in mediating these beneficial effects.
Epidemiological evidence suggests a potential correlation between metabolic syndrome, a cluster of cardiovascular risk factors including obesity, insulin resistance, dyslipidemia, and an increased risk of cognitive disorders (22–24). Moreover, studies on animal models report that HFD causes neuronal disorders such as memory alterations, mood changes, anxiety, and depression (25) and it may contribute to neurodegenerative diseases like AD and Parkinson’s disease (26, 27). Dysbiosis is present in obesity conditions, and alterations in gut microbiota composition are now considered major contributors to AD-like cognitive deficits (14).
We investigated if long-term supplementation with OFIF may have a positive impact on the brain health in HFD mice and explored the role of the gut microbiota on the OFIF-driven neuroprotection using HFD mice treated with antibiotics. We used the whole fruit to mimic a functional food intervention, rather than to attribute the observed effects to specific phytochemicals, focusing instead on the integrated impact of fruit consumption, which more plausibly modulates the gut microbiota given the complex nutritional matrix of the fruit, including fiber, sugars, and other bioactive compounds. Indeed, Opuntia ficus-indica fruits are a valuable source of bioactive compounds with recognized nutritional and functional properties. In particular, the yellow cultivar is characterized by the presence of organic and phenolic acids (such as citric acid, piscidic acid, ferulic acid and gluconic acid), flavonoids, the most abundant secondary metabolite class, ascorbic acid, and betalains, especially indicaxanthin, which is the predominant pigment responsible for the fruit’s yellow-orange coloration. These phytochemicals are known to contribute to the antioxidant capacity of the fruit by scavenging reactive oxygen species and reducing oxidative stress. The combined action of these bioactive compounds may explain the health-promoting effects attributed to prickly pear consumption, including antioxidant, anti-inflammatory, metabolic and gut microbiota modulatory properties (16, 28–31). In our study, as expected, HFD led to increased body weight, impaired glucose homeostasis, hyperinsulinemia, and elevated HOMA-IR. Consistent with our previous result (16), OFIF supplementation improved insulin sensitivity, as indicated by lower HOMA-IR in HFD + OFIF mice in comparison with HFD mice. Notably, HOMA-IR was decreased also in OFIF plus antibiotic-treated HFD mice. This might suggest that the improvement of insulin sensitivity is not dependent on the gut microbiota, as previously hypothesized (16). However, in HFD mice treated with cocktail of antibiotic without OFIF, HOMA-IR was 4.5 ± 0.2 (data not shown) supporting the hypothesis that the antibiotic treatment per se improve the insulin sensitivity. In according with our interpretation other studies report that antibiotic treatment may improve glucose metabolic parameters in HFD mice by reducing the production of pro-inflammatory bacterial metabolites and limiting systemic inflammation (32, 33). Therefore, the positive effect on insulin sensitivity observed in the HFD + ATB + OFIF group may derive from the direct impact of antibiotics on the gut microbiota.
Furthermore, HFD feeding resulted in reduced brain weight and brain index, accompanied by histopathological features indicative of neuronal damage, such as reduced neuronal density, cytoplasmic eosinophilia, and nuclear pyknosis. In fact, these structural brain alterations, including reduced brain mass, cortical atrophy, neuronal loss, and changes in neuronal architecture, are key hallmarks of neurodegeneration (34–36). OFIF supplementation prevented HFD-induced reduction in brain weight and preserved brain morphology and neuronal organization, suggesting a neuroprotective effect. A recent study reported that OFIF supplementation (14 mg/Kg twice a day) for 1 month mitigated cognitive alterations in HFD rats inducing beneficial effects on dysmetabolism (17). However, to our knowledge, our study is the first that provides evidence for the neuroprotective effect of OFIF in HFD-fed mice, that are dependent on the presence of intact gut-microbiota, as supported by the observation that protective effects were completely abolished following antibiotic-induced depletion of the gut microbiota. Notably, the dose used in the present study was designed to reflect a nutritionally relevant human intake, corresponding to the consumption of approximately four fruits per day (75 g lyophilized product), thereby supporting the translational relevance of the findings.
Behavioral analyses further support the hypothesis that OFIF exerts neuroprotective effects in the context of HFD-induced obesity. In agreement with previous studies, HFD-fed mice displayed reduced locomotor and exploratory activity together with impaired recognition memory, confirming that chronic exposure to an obesogenic diet negatively affects both emotional reactivity and cognitive performance, particularly hippocampal-dependent functions (37–39). OFIF supplementation partially ameliorated the behavioral deficits induced by HFD, reducing immobility time in the open field test and enhancing performance in the object recognition task. Interestingly, the beneficial effects of OFIF were more evident for exploratory and motivational behaviors than for recognition index performance, suggesting that different behavioral domains may display distinct sensitivities to nutritional and microbiota-dependent modulation. Moreover, the lack of full recovery in RI% indicates that some aspects of memory discrimination may be less responsive to the nutritional intervention or may require longer treatment duration. Importantly, depletion of gut microbiota by antibiotic administration markedly attenuated most of the beneficial effects induced by OFIF, particularly in locomotor and cognitive parameters. These findings suggest that an intact gut microbiota may contribute to the neurobehavioral effects of OFIF. Nevertheless, the present results do not identify the molecular or cellular mechanisms underlying this association, which warrant further investigation.
Neurodegeneration induced by metabolic alterations such as HFD shares several pathological features and molecular mechanisms with AD (40). Consequently, in light of the observed variations in brain structure and cognitive function, PCR array analyses were carried out to examine possible changes in the expression of genes involved in Alzheimer Disease-related molecular pathways in the cortex and hippocampus of the different experimental groups. At the molecular level, both in cortex and hippocampus, OFIF modulated the expression of multiple Alzheimer’s disease (AD)-related genes, suggesting a potential role of the fruit in modulating brain lipid metabolism, APP processing and synaptic functionality-mechanisms closely implicated in the pathogenesis of neurodegeneration and AD (40).
Specifically, our findings suggest that OFIF induces a broad transcriptional reprogramming in the cortex of HFD mice, affecting multiple genes that are critically involved in neurodegeneration, synaptic function, and metabolic regulation. Notably, the modulation of genes associated with Aβ metabolism (e.g., Bace2, Psen1, Ctsb, Ctsl, Lrp8) suggests that OFIF may influence amyloidogenic processing and clearance pathways. Alterations in these genes have been directly linked to amyloid deposition and cognitive decline in experimental models of AD (41–43). In parallel, the upregulation of genes involved in synaptic function and neuronal plasticity (e.g., Apba1, Chat, Gap43) suggests a potential enhancement of synaptic integrity and neurotransmission. The observed regulation of genes related to lipid metabolism (Abca1, Apoa1) and insulin signaling (Insr, Igf2) also is indicative of improved metabolic homeostasis within the cortex. This is particularly relevant in the context of HFD-induced neurodegeneration, where metabolic dysfunction represents a key driver of cognitive impairment (44). The transcriptional profile observed in the hippocampus further reinforces the hypothesis that OFIF exerts a neuroprotective action. Although the number of differentially expressed genes was more limited compared to the cortex, the affected targets converge on AD-related molecular pathways and synaptic function. In particular, the upregulation of Abca1 supports a potential enhancement of cholesterol efflux and lipid homeostasis in the hippocampus, a mechanism known to facilitate Aβ clearance and reduce amyloid burden (45). Similarly, the increased expression of Abca1, Apba1, Apbb2, and Aplp1, all involved in APP trafficking and processing suggests a shift toward non-amyloidogenic or regulatory pathways that may limit toxic Aβ production. On the other hand, the downregulation of Apbb1 and Aph1a, key components of the amyloidogenic processing machinery, suggests a reduction in Aβ generation, reflecting a protective shift away from pathogenic APP cleavage. Concurrently, the upregulation of Gng8 and Gngt2, components of G protein–coupled receptor signaling, suggests an enhancement of G protein-coupled receptor signaling, which is essential for synaptic transmission, plasticity, and memory formation. The reduced expression of Bche could suggest a potential improvement in cholinergic neurotransmission, which is typically impaired in AD. This aligns with hypothesis that modulation of cholinergic pathways contributes to cognitive resilience (46). Finally, the downregulation of lysosomal cathepsins (Ctsb and Ctsl) suggests attenuation of neuroinflammatory and apoptotic processes, as these proteases are recognized as mediators of both aberrant APP processing and neurodegeneration (42).
Interestingly, these transcriptional changes were largely abolished in antibiotic-treated mice, suggesting that gut microbiota is required for OFIF-driven modulation of AD-related molecular pathways. Therefore, this finding supports a microbiota-dependent contribution to the neuroprotective effects of OFIF.
Gut microbiota analysis in fecal samples of the different animal groups was performed to assess the composition. Microbiota profiling revealed HFD-induced dysbiosis. Consistently with previous reports (31, 47, 48), 16S rRNA sequencing revealed reduced microbial diversity and altered taxonomic composition, as indicated by changes in α- and β-diversity indices and increased Firmicutes/Bacteroidota ratio. Specifically, HFD decreased Bacteroides, bacteria mediating generally host beneficial functions, and it increased Firmicutes, bacteria with detrimental functions. In line with these results, other studies in animal models and humans have shown an increase in the ratio of Firmicutes to Bacteroides after HFD feeding (48). Moreover, HFD mice showed increased abundance of the bacterial genera, such as Clostridium, Dorea and Romboutsia, frequently linked to obese-like features, metabolic disorders and systemic inflammation, conditions that contribute to cognitive impairment (49, 50). OFIF supplementation partially prevented HFD-induced dysbiosis. In fact, although α-diversity and β-diversity were not restored, OFIF induced compositional shifts, notably reducing significantly the Firmicutes/Bacteroidota ratio and enriching genera such as Duncaniella, Muribaculum, Paramuribaculum, Bacteroides, Parabacteroides, and Akkermansia. Among these taxa, Akkermansia and Parabacteroides have been reported to reduce neuroinflammation and improve cognitive function (51, 52). Moreover, the abundance of Muribaculum has been associated with modulation of the gut–brain axis through effects on host neurotransmitter synthesis, immune responses, and intestinal barrier function mediated by microbial metabolites such as short-chain fatty acids (SCFAs) (53). Similarly, Paramuribaculum and Duncaniella participate in the fermentation of complex carbohydrates, producing SCFAs and contributing to immune regulation and the reduction of inflammation (54).
Correlation analyses further supported the functional relevance of the gut microbiota modulation. OFIF-enriched genera, particularly Duncaniella and Paramuribaculum, were positively associated with brain weight, and beneficial gene expression profiles, whereas HFD-associated genera showed opposite correlations. Notably, Duncaniella exhibited significant associations across multiple cortical gene pathways, suggesting a central role in mediating gut–brain communication leading to improvement of Aβ metabolism, synaptic functionality, and lipid metabolism. On the other hand, emerging evidence suggests that Duncaniella, a bacterial genus within the family Muribaculaceae, may play an important role in carbohydrate metabolism, production of SCFAs, and host metabolic homeostasis, with downstream effects on immune and neurological function (55).
We are conscious that this study has some limitations. Including an OFIF-supplemented STD group would have provided additional information on the effects of OFIF under metabolically unaltered conditions. However, the study design was constrained by the need to comply with the 3Rs principle (Replacement, Reduction, and Refinement), with particular emphasis on the Reduction principle aimed at minimizing the number of animals used. While strong associations between microbiota composition and neurobiological outcomes were identified, the specific microbial metabolites and signaling pathways mediating these effects were not directly assessed. In addition, the use of broad-spectrum antibiotics, while effective in demonstrating microbiota dependence, does not allow identification of specific bacterial species responsible for the observed benefits. Another limitation is represented by the exclusive use of male mice, that we chose to reduce biological variables and potential hormonal fluctuations, but it does not allow generalizability of obtained results.
In conclusion, our findings demonstrate that the neuroprotective effects of long-term OFIF supplementation are dependent on the presence of an intact gut microbiota, although, the molecular mediators underlying this gut-brain interaction remain to be elucidated. Collectively, these findings suggest that increased consumption of Opuntia ficus-indica fruit may represent a promising prebiotic strategy to mitigate obesity-associated cognitive decline.
Glossary
Glossary
- AD
Alzheimer’s disease
- ANCOM-BC
Analysis of Compositions of Microbiomes with Bias Correction
- ASV
Amplicon Sequence Variant
- ATB
Antibiotic cocktail
- cDNA
Complementary DNA
- ELISA
Enzyme-Linked Immunosorbent Assay
- H&E
Hematoxylin and Eosin
- HFD
High-Fat Diet
- HOMA-IR
Homeostatic Model Assessment of Insulin Resistance
- OFIF
Opuntia ficus-indica Fruit
- OFT
Open Field Test
- ORT
Object Recognition Test
- PBS
Phosphate-Buffered Saline
- PCoA
Principal Coordinates Analysis
- PCR
Polymerase Chain Reaction
- qPCR
Quantitative Real-Time Polymerase Chain Reaction
- RNA
Ribonucleic Acid
- RT2 PCR Array
Reverse Transcription Profiler PCR Array
- SEM
Standard Error of the Mean
- STD
Standard Diet
Funding Statement
The author(s) declared that financial support was received for this work and/or its publication. This work has received funding from the European Union –Next Generation EU through the Italian Ministry of University and Research under PRIN PNRR REG D. R.1718–2022– Project number PRJ-1575 INDICA. Moreover, the work was co-financed by the Ministry of University and Research (MUR), Italy in compliance with General Secretary Decree No. 1224/2022. Pasquale Calvi was supported by Fondazione Umberto Veronesi.
Edited by: Alessandro Medoro, University of Molise, Italy
Reviewed by: Mingxuan Zheng, The Suqian Clinical College of Xuzhou Medical University, China
Muhammad Danial Ramli, Management and Science University, Malaysia
Data availability statement
The original contributions presented in the study are publicly available. These data can be found in the NCBI Sequence Read Archive (SRA) under Study accession number SRP720171 and BioProject accession number PRJNA1498323.
Ethics statement
The animal study was approved by Italian Ministry of Health, Rome, Italy. The study was conducted in accordance with the local legislation and institutional requirements.
Author contributions
PC: Investigation, Methodology, Writing – original draft, Conceptualization, Data curation. STe: Investigation, Methodology, Writing – original draft. MG: Conceptualization, Investigation, Methodology, Writing – original draft. STi: Methodology, Writing – original draft. LP: Methodology, Writing – original draft. NR: Methodology, Writing – original draft. GG: Investigation, Methodology, Writing – original draft. PS: Supervision, Writing – original draft. AM: Methodology, Writing – original draft. DN: Methodology, Writing – original draft. PP: Methodology, Writing – original draft. FM: Conceptualization, Supervision, Writing – original draft. AA: Funding acquisition, Project administration, Supervision, Writing – review & editing.
Conflict of interest
The author(s) declared that this work was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
Generative AI statement
The author(s) declared that Generative AI was not used in the creation of this manuscript.
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Supplementary material
The Supplementary material for this article can be found online at: https://www.frontiersin.org/articles/10.3389/fnut.2026.1909657/full#supplementary-material
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Data Availability Statement
The original contributions presented in the study are publicly available. These data can be found in the NCBI Sequence Read Archive (SRA) under Study accession number SRP720171 and BioProject accession number PRJNA1498323.








