TABLE 3.
Position
|
|||||||||
---|---|---|---|---|---|---|---|---|---|
Base | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 |
Position frequency matrix | |||||||||
A | 28 | 2 | 15 | 0 | 2 | 3 | 32 | 4 | 25 |
C | 3 | 41 | 17 | 0 | 0 | 0 | 4 | 33 | 4 |
G | 7 | 0 | 5 | 46 | 0 | 1 | 6 | 6 | 4 |
T | 8 | 3 | 9 | 0 | 44 | 42 | 4 | 3 | 13 |
Position weight matrix | |||||||||
A | 1.02 | −2.78 | 0.12 | −10.43 | −2.78 | −2.20 | 1.21 | −1.78 | 0.86 |
C | −1.51 | 2.16 | 0.89 | −9.85 | −9.85 | −9.85 | −1.20 | 1.84 | −1.20 |
G | −0.390 | −9.85 | −0.88 | 2.32 | −9.85 | −3.19 | −0.52 | −0.515 | −1.20 |
T | −0.79 | −2.20 | −0.52 | −10.43 | 1.57 | 1.51 | −1.78 | −2.20 | −0.09 |