Simple Summary
Xenomorphomyces formicartus sp. nov.—a new fungus parasitic on the ant Lasius distinguendus (Emery, 1916)—is described from specimens collected at the Botanical Garden of the Southern Federal University (Rostov-on-Don, Russia). The new genus Xenomorphomyces is assigned to the family Readerielliopsidaceae on the basis of morphological and multilocus phylogenetic data. We also provide a description of its asexual morph. The combination of sequence and morphological data allows unambiguous separation of X. formicartus from its congeners within the family. Furthermore, histology and micro-CT reveal the pattern of pathogenesis within the host ant.
Keywords: ants, Capnodiales, Lasius, microfungi, multi-gene phylogeny, myrmecopathogenic fungi, parasitic fungi, Readerielliopsidaceae
Abstract
This study presents the first case of an ectoparasitic fungal infection of ants from southern Russia with the description of a new species Xenomorphomyces formicartus V.A. Iliushin & I.Y. Kirtsideli, sp. nov. of a new genus Xenomorphomyces gen. nov. belonging to the family Readerielliopsidaceae. The new species was found on Lasius distinguendus worker ants within a single nest in the Botanical Garden of the Southern Federal University, Rostov-on-Don, Rostov Region, Russia. The paper evaluates the phylogenetic position of the parasitic fungus within the Readerielliopsidaceae family based on the morphological observations and multilocus phylogenetic analysis. The family Readerielliopsidaceae belongs to the Capnodiales order, the class Dothideomycetes. Partial sequences of the loci encoding ribosomal polymerase II second-largest subunit (RPB2), 28S rDNA (LSU) and internal transcribed spacer rDNA region (ITS1-5.8S-ITS2) were analyzed. The asexual morph of X. formicartus was described. A comprehensive analysis of pathogenicity was performed using live ants, histological and micro-CT studies. The sequence data, as well as macro- and micromorphological characteristics, distinguish X. formicartus from all known species in the Readerielliopsidaceae.
1. Introduction
Ants (Hymenoptera, Formicidae), as social insects, present a convenient target for a wide range of parasitic microorganisms, including fungi, due to their group lifestyle and frequent interactions between individuals, which increase opportunities for pathogen transmission [1,2,3,4,5]. However, fungal epidemics affecting entire ant colonies are rare. Most known cases involve the infection of individual ants, which can be attributed to the ants’ sophisticated behavioral and immunological defense mechanisms against pathogens [1,6]. Still, large-scale epizootics in ant colonies have been documented in some cases [7,8].
Depending on their negative effect on the host insect, these fungi can be classified as pathogenic (necrotrophs or hemibiotrophs, host-killing, such as Beauveria, Conidiobolus, Metarhizium, Pandora) or parasitic (depending on the living host, non-lethal, e.g., Aegeritella, Hormiscium, Laboulbenia, Rickia) [6,9,10,11]. They first infect the host via penetration of its cuticle and generally form special structures such as germ tubes, appressoria and/or penetration pegs [10]. Ectoparasites exhibit a range of contact modes with their hosts from merely attaching to the integuments to invasion into the body cavity via more or less pronounced penetration structures. Some species can invade the cuticle only superficially. It is considered that in this process the fungus obtains nutrients by absorption through the cuticle or via contact with underlying living tissues [12]. The harmful impact of ectoparasitic fungi can range from almost imperceptible (Aegeritella, Hormiscium, and Laboulbenia camponoti) to relatively weak in other Laboulbeniales [6] as manifested by size decline in the worker ants, behavioral changes, and even decreased lifespan of colony members [12,13]. The absence of strong negative effects in some associations likely reflects a long evolutionary history between these fungi and their ant hosts [1,6,14].
To date, 11 species of ectoparasitic fungi associated with ants have been reported from the Holarctic. However, Eastern Europe remains one of the most poorly studied regions in this regard, with only a small number of reports from Russia, Poland, Czech Republic, Bulgaria, Romania, Slovakia, Slovenia, Hungary and Croatia [6,14,15,16,17,18,19,20,21,22].
Holarctic representatives of ant-ectoparasitic fungi belong to the three phyla: Ascomycota, Basidiomycota, and Laboulbeniomycota. The species described here was found to be a member of the Ascomycota, class Dothideomycetes, order Capnodiales. Capnodiales originally included three families of sooty molds (Antennulariaceae, Capnodiaceae, Coccodiniaceae) [23]. Schoch et al. transferred Mycosphaerellaceae and Piedraiaceae into Capnodiales and recognized the Cladosporiaceae, thereby expanding the circumscription of this order [23]. Phylogenetic studies further enlarged the order, making it the second-largest order of Dothideomycetes. Based on this broad definition, Capnodiales was represented by 12 families: Capnodiaceae, Cladosporiaceae, Cystocoleaceae, Dissoconiaceae, Extremaceae, Mycosphaerellaceae, Neodevriesiaceae, Phaeothecaceae, Phaeothecoidiellaceae, Racodiaceae, Schizothyriaceae, Teratosphaeriaceae. However, recent studies using molecular genetic analysis have shown that Capnodiales s. lat. is polyphyletic and is represented by seven orders [24]. Three families are recognized in Capnodiales s. str., namely Capnodiaceae, Neoantennariellaceae and Readerielliopsidaceae.
According to polyphasic taxonomy, the family Readerielliopsidaceae includes the genera Alloscorias Haituk & Cheew, Fumagospora G. Arnaud, Phaeoxyphiella Bat. & Cif., Readerielliopsis Crous & Decock, Scolecoxyphium Cif. & Bat. and Scorias Fr. [24]. Representatives of this family are poorly studied in the context of insect associations, and their diversity and ecological roles remain insufficiently understood.
To date, only two species of ectoparasitic fungi associated with members of the ant genus Lasius are known: Aegeritella tuberculata Bałazy & J. Wiśn. and Laboulbenia formicarum Thaxt. The present paper reveals a third infectious agent for the genus Lasius belonging to a new species of a new genus of the family Readerielliopsidaceae. The myrmecoparasitic isolate was collected from the Lasius distinguendus worker ants in the Botanical Garden of the Southern Federal University (Rostov-on-Don, Russia). The new taxon was described using a multilocus molecular phylogenetic approach and morphological characteristics, and it is proposed here as a novel species belonging to a new genus. The pathogenesis pattern inside worker ants was studied using histological sections and micro-CT. The paper also discusses possible transmission pathways and the effect of the ectoparasite on the infected colony.
2. Materials and Methods
2.1. Collection and Culturing of Ants
The collection of Lasius distinguendus worker ants was carried out in the period from July 2021 to September 2024 from a single nest, which was located under a stone in Thuja plantings in the Southern Federal University Botanical Garden (SFEDU BG) (47°13′57.37″ N, 39°39′41.70″ E, Rostov-on-Don, Rostov Region of Russia). The live ants were collected and placed in standard test tube incubators. In total, 3 isolated incubators with around 10 worker ants in each were maintained for three months. The dead individuals were not removed from the test tubes during the entire experiment period. One incubator with worker ants of the same species collected in another location (Bagaevskaya village, Bagaevsky district, Rostov Region of Russia) was used as a control group. The ants were fed with 20% glucose syrup during the observation period.
2.2. Microscopy and Histological Studies
Light (Leica M205C, Leica DM4500 (Leica Microsystems CMS GmbH, Wetzlar, Germany)) and scanning electron (Hitachi TM3000 (Hitachi High-Technologies Corporation, Tokyo, Japan)) microscopes were used for morphological examination of infected ants (description and counting fungal bulbils on integuments of ants). For SEM, some individuals were preserved in 100% ethanol and then dried used the “critical point” method. The final images were processed with Adobe Photoshop CS5.
For histological studies live ants were fixed in alcoholic Carnoy’s solution and then embedded in paraffin, sectioned at 8–10 µm thickness using a microtome and stained with hematoxylin according to Boehmer’s method. To detect pathological changes in internal organs, uninfected individuals from the control group were subjected to the same procedures. Nine infected and three uninfected workers were examined.
2.3. Microtomographic (µCT) Studies
An array of microtomographic sections were obtained using a NeoScan N80 High Resolution Microtomograph (Neoscan, Mechelen, Belgium). Visualization, volume rendering, and segmentation of tomographic sections were performed in 3DSlicer 5.7.0 (https://www.slicer.org/). The ant body parts were scanned with the following parameters: voltage 38 kV, current 190 µA, without a filter, with a pixel size of 0.6 µm and a resolution of 4896 × 4896 pixels per slice with a continuous 360° rotation and a camera exposure of 145 ms per frame (3280 X-ray projections). The results of segmentation (in 3DSlicer) were saved in the file format STL. Next, Drishti v3.2.27.10.23 (National Computational Infrastructure, Australian National University, Canberra, Australia) software was used for visualization and animation of the ant body and fungal parts.
2.4. Strain Isolation
During field surveys of L. distinguendus ants in the SFEDU BG, visually distinguishable symptoms of infestation in the form of dark growths on the surfaces of the body were noted. It was suggested that these growths were caused by ectoparasitic fungi. Ants were examined under a stereoscopic microscope to screen for fungal growth. Ants with visible growths on the surface were washed three times with sterile saline and left to dry. Areas of the body and limbs with visually distinguishable growths were cut off with a sterile scalpel and then surface-sterilized with 96% ethanol for 1 min and flamed over an alcohol lamp.
These body parts of ants were placed on Petri dishes with agar media: potato carrot agar (PCA) [25], Sabouraud Agar (SDA) [26], Czapek agar (CZ) [27] and malt extract agar (MEA) [28]. Five pieces of ant parts were placed on each dish. In total, about 100 inoculations of ant parts were made. A control culture was prepared using uninfected ants from the same colony with the same cultivation method. All cultures were stored at room temperature in natural, diffused light. After 20–30 days of incubation, dark colonies were observed on all media with material from infected ants. In dishes with infected parts of ants, colonies were observed only near the body part or ant limbs. On negative control plates, dark colonies were not observed even after 60 days of incubation. The resulting cultures were transferred to sterile agar media for further cultural-morphological and molecular studies.
The isolated strain was deposited in the All-Russian Collection of Microorganisms (VKM), G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms at the Pushchino Biological Research Center of the Russian Academy of Science, Pushchino, Russia, under No. VKM F-5092. A dried type culture is preserved in the Mycological Herbarium of the Komarov Botanical Institute, St. Petersburg, Russia (acronym LE), under No. LE F-350982.
2.5. Molecular Studies and Phylogenetic Analysis
The pure culture was grown on CZ at 20 °C for 30 days for molecular analysis. DNA was extracted by using a Diamond DNA Plant kit (ABT, Russia, Barnaul) according to the manufacturer’s instructions. Internal transcribed spacer rDNA region (ITS1-5.8S-ITS2) was amplified using the PCR primers ITS1 (5′-TCCGTAGGTGAACCTTGCGG-3′) and ITS4 (5′-TCCTCCGCTTATTGATATGC-3′) [29]. The PCR amplification conditions were: 2 min at 95 °C, followed by 35 cycles, each consisting of 30 s at 95 °C, 30 s at 55 °C and 1 min at 72 °C; the final PCR extension step was 10 min at 72 °C. The D1/D2 region of 28S rDNA (LSU) was amplified using the PCR primers NL-1 (5′-GCATATCAATAAGCGGAGGAAAAG- 3′) and NL-4 (5′- GGTCCGTGTTTCAAGACGG -3′) [30]. The PCR amplification conditions were: 2 min at 94 °C, followed by 35 cycles, each consisting of 30 s at 94 °C, 1 min at 55 °C and 2 min at 72 °C; the final PCR extension step was 5 min at 72 °C. For amplification of the partial ribosomal polymerase II second-largest subunit (RPB2), primers 5F_Eur (5′-GAY-GAY-CGK-GAY-CAY-TTC-GG-3′) and 7CR_Eur (5′- CCC-ATR-GCY-TGY-TTR-CCC-AT-3′) were used [31]. The PCR cycling parameters were: 5 min at 94 °C, followed by 35 cycles, each consisting of 30 s at 94 °C, 30 s at 52 °C and 1 min at 72 °C; the final extension step was 10 min at 72 °C. The sequencing of the obtained DNA fragments was carried out using the Sanger method.
Sequences were trimmed, edited and assembled in BioEdit version 7.1.9. The obtained sequences were submitted to the NCBI GenBank, compared to available sequences in the database by using BLAST (https://blast.ncbi.nlm.nih.gov/Blast.cgi) (accessed on 16 August 2024). The sequences were aligned with other Capnodiales species sequences using the multiple sequence alignment ClustalW [32]. A combined LSU + ITS + RPB2 data matrix containing 50 isolates belonging to 46 species was constructed. Data sets were created by combining the resulting sequences with preferably ex-type or holotype reference sequences from previous studies deposited at NCBI (Table 1). The phylogenetic analysis was performed by using the maximum likelihood method (ML) and Kimura 2-parameter model [33]. Initial tree(s) for the heuristic search were obtained automatically by applying Neighbor-Joining and BioNJ algorithms to a matrix of pairwise distances estimated using the Maximum Composite Likelihood (MCL) approach and then selecting the topology with a superior log likelihood value. The evolutionary history was inferred using the Maximum Parsimony (MP) method. The MP tree was obtained using the Subtree–Pruning–Regrafting (SPR) with search level 1 in which the initial trees were obtained by the random addition of sequences (10 replicates) [34]. The partial deletion option was applied to eliminate all positions with less than 95% site coverage, resulting in a final data set. Confidence levels in nodes were determined using bootstrap analyses of 1000 replicates.
Table 1.
Strains included in the phylogenetic analysis and their GenBank accession numbers. The X. formicartus sequences are in bold. “nd”—no data.
| Species | Collection No. | LSU | ITS | RPB2 |
|---|---|---|---|---|
| Alloscorias syngonii | SDBR-CMU355 | MW263929 | MW263927 | MW269550 |
| Capnodium alfenasii | CBS 146151 | MN749165 | MN749233 | MN829260 |
| C. blackwelliae | CBS 133588 | MH878118 | MN749235 | GU371743 |
| C. coartatum | MFLUCC10-0069 | JN832614 | nd | nd |
| C. coffeae | CBS 147.52 | GU214400 | DQ491515 | KT216519 |
| C. coffeicola | MFLUCC15-0206 | KU358920 | KU358921 | nd |
| C. gamsii | CBS 892.73 | GU301847 | MN749237 | GU371736 |
| C. neocoffeicola | CBS 139614 | MN749172 | MN749242 | MN829267 |
| C. paracoffeicola | CBS 139616 | MN749174 | MN749244 | MN829269 |
|
Chaetocapnodium
indonesiacum |
CBS 202.30 | GU301849 | MH855113 | MN829273 |
| C. insulare | CBS 146159 | MN749178 | MN749248 | MN829274 |
| C. philippinense | MFLUCC12-0110 | KP744503 | MN749251 | MN829277 |
| C. placitae | CBS 124758 | GQ303299 | GQ303268 | MN829278 |
| C. siamensis | CBS 139815 | MN749181 | MN749252 | MN829279 |
| C. summerellii | CBS 146157 | MN749176 | MN749246 | MN829271 |
| C. thailandense | CBS 139619 | MN749183 | MN749254 | MN829281 |
| Conidiocarpus asiticus | MFLUCC10-0062 | JN832612 | KU358924 | nd |
| C. caucasicus | GUMH 937 | KC833050 | nd | nd |
| C. siamensis | MFLUCC10-0061 | JN832607 | KU358923 | nd |
| Fumagospora capnodioides | CBS 131.34 | EU019269 | AJ244240 | KT216553 |
| Heteroconium citharexyli | HM628775 | HM628775 | HM628776 | nd |
| Leptoxyphium cacuminum | MFLUCC10-0059 | JN832603 | nd | nd |
| L. citri | CBS 451.66 | KF902094 | MN749266 | GU371727 |
| L. glochidion | IFRDCC 2651 | KF982308 | KF982307 | nd |
| L. kurandae | CBS 129530 | JF951170 | JF951150 | MN829295 |
| L. madagascariense | CBS 124766 | MH874923 | MH863407 | MN829296 |
| Neoantennariella phylicae | CBS 146164 | MN749209 | MN749281 | MN829311 |
| Neoasbolisia phylicae | CBS 146168 | MN749215 | MN749287 | MN829317 |
| Phaeoxyphiella australiana | CBS 146169 | MN749220 | MN749292 | MN829322 |
| P. phylicae | CBS 146171 | MN749216 | MN749288 | MN829318 |
| P. phylicae | CBS 146172 | MN749217 | MN749289 | MN829319 |
| Readerielliopsis fuscoporiae | CBS 139900 | KR476755 | KR476720 | MN829326 |
| R. guyanensis | CBS 117550 | FJ493211 | MH863023 | MN829327 |
| Scolecoxyphium blechni | CBS 146174 | MN749224 | MN749296 | MN829328 |
| S. blechnicola | CBS 146175 | MN749225 | MN749297 | MN829329 |
| S. leucadendri | CBS 146176 | MN749226 | MN749298 | MN829330 |
| S. phylicae | CBS 146177 | MN749227 | MN749299 | MN829331 |
| S. phylicae | CBS 146178 | MN749228 | MN749300 | MN829332 |
| Scorias aphidis | CBS 325.33 | MH866910 | GU214696 | KT216542 |
| S. camelliae | CBS 201.30 | MH866560 | MH855112 | MN829333 |
| S. leucadendri | CBS 131318 | JQ044456 | JQ044437 | MN829334 |
| S. mangiferae | MFLUCC15-0230 | KT588603 | KT588604 | nd |
| S. spongiosa | MFLUCC10-0084 | JN832601 | nd | nd |
| Xenomorphomyces formicartus | VKM F-5092 | PQ555705 | PQ555703 | PQ565711 |
| Outgroup: Dothidea nigricans |
VKM F-5012 | OR801565 | OP961959 | OR810751 |
2.6. Morphological Analysis
For morphological analysis the isolates were cultivated on Czapek agar (CZ) [27], malt extract agar (MEA) [28], Sabouraud agar (SDA) [35] and potato carrot agar (PCA) [25]. The isolates were inoculated on 9 cm Petri dishes and incubated for 30 days at 21 °C in darkness. In addition, inoculated CZ, MEA and SDA plates were incubated for 21 days at 2, 6, 8, 12, 16, 20, 25, 30, 32 and 35 °C. Color determination was performed according to the ISCC-NBS Centroid Color Charts [36], according to the recommendations of Nováková et al. [37]. Microscopy by Carl Zeiss Axio Imager A1 was used for micromorphological examination.
2.7. Enzymatic Activity
Tests for enzymatic activity (hemolytic, phospholipase, chitinase, ligninolytic and cellulolytic activity) were carried out according to the methods described in our works [38,39].
3. Results
As a result of the research, one strain belonging to one previously undescribed species and the genus Xenomorphomyces gen. nov was isolated.
A BLAST analysis of LSU sequences demonstrated a relationship between the species X. formicartus and Readerielliopsis guyanensis (Decock) Crous & Decock, with a 95.20% similarity of the sequences. According to a BLAST analysis of the ITS region, X. formicartus is most closely related to R. guyanensis with an 89.35% similarity. A BLAST analysis of the partial RPB2 gene demonstrated a relationship between the species X. formicartus and Scorias spongiosa (Schwein.) Fr., with an 80.56% similarity to the sequences.
Sequence data from LSU, ITS and RPB2 were analyzed for examination of the X. formicartus phylogeny. The data of 50 isolates including the outgroup (Dothidea nigricans VKM F-5012) were used to reveal the phylogenetic relationships of the supposed new species with other species of Capnodiales. The following loci were included in the phylogenetic analysis: the partial 28S rDNA gene (LSU) (571 sites/145 variable), the ITS region (449 sites/238 variable), and the partial RPB2 gene (579 sites/289 variable). There were a total of 1599 positions in the final data set. The combined maximum likelihood phylogenetic tree based on LSU, ITS and RPB2 is shown in Figure 1.
Figure 1.

Phylogenetic tree of the combined ITS + LSU + RPB2 sequences showing the relationships between Xenomorphomyces formicartus and the other species in Capnodiales. Bootstrap support values (1000 replicates) for maximum likelihood (ML) and Maximum Parsimony (MP) are shown at the nodes as ML/MP. The tree is rooted with Dothidea nigricans VKM F-5012. Values below 50% are not shown (or replaced with —).
According to this analysis, X. formicartus clustered together with Readerielliopsis guyanensis, R. fuscoporiae Crous & Decock, Alloscorias syngonii Haituk & Cheew and Scorias spp. as the most closely related species.
Taxonomy
Xenomorphomyces V.A. Iliushin & I.Y. Kirtsideli, gen. nov.
MB 856516
Etymology. Referring to the parasitic organism “Xenomorph” from the science fiction movie “Alien” + the ending “-myces” is a standard suffix meaning “fungi”.
Type species. Xenomorphomyces formicartus V.A. Iliushin & I.Y. Kirtsideli
Xenomorphomyces formicartus V.A. Iliushin & I.Y. Kirtsideli, sp. nov. (Figure 2 and Figure 3)
MB 856517
Generic-specific diagnosis. The mycelium is hyaline to light brown and septate; the walls are smooth, sometimes slightly rough, branching. It forms multiple chlamydospores, both at the ends of hyphae and intercalary ones, often in chains ranging in size. Tangles of hyphae are rare.
Type: RUSSIA. Rostov Region: Rostov-on-Don, Botanical Garden of the Southern Federal University, (47°24′7.289″ N, 39°39′59.599″ E): from ants, isol. I.Y. Kirtsideli, (holotype LE F-350982 dried culture); ex-type culture VKM F-5092. ITS barcode: PQ555703 (alternative markers: LSU = PQ555705; RPB2 = PQ565711).
Etymology: The name refers to the association with ants, “formi” for an ant and “cartus” for a container.
Colony characters: The appearance of dark colonies in dishes with infected parts of ants was observed only near the body part and limbs of the ant. Colonies were found on 14% of the analyzed samples. A total of eight fungal cultures were isolated as pure cultures, which did not differ in morphological characteristics. No significant differences were noted in the infected parts of the ants’ bodies from which the colonies were isolated.
Macromorphology. Colonies on Sabouraud medium (Figure 2A) reach 46 mm after 30 days at 20 °C. The colony is zoned; the edge is black and slightly lighter towards the center, with a velvety coating. The substrate mycelium is dark brown; the aerial mycelium is brown and colorless. The reverse is dark brown; the medium is not colored. Exudate is absent.
Colonies on Czapek medium reach 38 mm after 30 days at 20 °C. The colony is zoned; the edge is wide and dark brown, light brown towards the center, and felt-like. The substrate mycelium is brown; the aerial mycelium is mainly gray-brown. The reverse is dark brown or black; the medium is not colored. Exudate is absent. Some satellite colonies formed near the edge of the mother colony (Figure 2B).
On PCA (Figure 2C) they reach 34 mm after 30 days at 20 °C. The colony is not zoned and is semi-submerged in the substrate. Exudate is absent. The substrate mycelium is dark brown; the aerial mycelium is brown. The reverse is dark brown; the medium is not colored.
On MEA (Figure 2D) they reach 45 mm after 30 days at 20 °C. The colony is zoned; the edge is dark brown, wide, light brown towards the center, and felt-like. Exudate is absent. The substrate mycelium is dark brown; the aerial mycelium is colorless. The reverse is dark brown or black; the medium is not colored.
Growing at different temperatures does not affect the color of the colonies.
Figure 2.

Macromorphology of Xenomorphomyces formicartus. Morphogenesis of colony growing on SDA (A), CZ (B), PCA (C) and MEA (D) at 20 °C. Petri dishes, 60 mm.
Micromorphology. Microscopic examination showed that most of the fungal colonies consist of septate mycelium and a large number of chlamydospores. Conidial sporulation begins to form only after 20–30 days of growth, usually in the upper part of the colony in the aerial mycelium zone.
Conidial sporulation is hyaline, from round-oval to oval-elongated, often pear-shaped, 2.2–5.3 × 8.2–12.5 (13.5) µm. Conidia are unicellular (Figure 3A) and less often two- or three-celled (Figure 3I). Conidiophores are single (Figure 3E,F) and can form a cluster of conidia at the end of the conidiophores (Figure 3C). Branching conidiophores are noted (Figure 3B,J), where the formation of conidia occurs both at the end of the conidiophores and at the sites of branching of the conidiophores. The formation of structures resembling a bed (a cluster of conidiophores growing next to each other) can also be noted (Figure 3D,G,H). Pycnidia are absent.
Figure 3.

Micromorphology of Xenomorphomyces formicartus, (A–J)—conidia and conidiophores; (K–U)—mycelium and chlamydospores. Scale bars—10 μm.
The mycelium is hyaline to light brown and septate; the walls are smooth, sometimes slightly rough, branching, from 2.5 to 7.2 µm (Figure 3K,P,S,T). It forms multiple chlamydospores (both at the ends of hyphae and intercalary), often in chains, ranging in size from 5.3 to 14.1 µm, often darkly pigmented (Figure 3L–O,Q,R). Tangles of hyphae are rare.
These characteristics of this fungus suggest that this fungus is likely capable of disseminating such dispersed cells as propagules, in addition to forming conidia.
Note. The genus Xenomorphomyces was described based on fungal isolates recovered from an ant colony. This genus differs significantly ecologically and morphologically from other genera in the family Readerielliopsidaceae. Most members of these fungi are epiphytic and belong to the so-called sooty molds, which form a dark coating on the surfaces of living plants. They feed primarily on the sugary secretions of aphids and other insects, not directly parasitizing the tissues of living plants but impairing their photosynthesis by forming a dense black coating. The genus Xenomorphomyces (X. formicartus) is described as a parasite of Lasius distinguendus, i.e., it can be considered a fungal infection of the ant and an entomopathogen of insects. From an ecological and evolutionary point of view, this immediately distinguishes the genus Xenomorphomyces from other representatives of the family Readerielliopsidaceae.
The main differences between the genus Xenomorphomyces and all other genera in the family Readerielliopsidaceae concern the absence of pycnidia and the branching of conidiophores. In all other genera (Alloscorias, Scolecoxyphium, Fumagospora, Scorias, Phaeoxyphiella), pycnidia are invariably present and vary in shape—from spherical and pear-shaped to elongate-cylindrical, horn-like, or flask-shaped. By contrast, Xenomorphomyces completely lacks pycnidia; instead, it forms characteristic “bed-like” structures—dense clusters of conidiophores growing side by side.
The second major distinction is the conidiophore morphology. In most genera, conidiophores are reduced to single conidiogenous cells, with only Fumagospora and Phaeoxyphiella showing weakly branched forms. Xenomorphomyces, however, has distinctly branching conidiophores, which further sets it apart within the family. In terms of conidia, the genus does not differ from the rest: conidia range from hyaline to brown, are round-oval to oblong, ellipsoid or elongated, and may be single-celled or possess transverse and longitudinal septa (as seen in Fumagospora and Phaeoxyphiella). The main differences between the genera of the family are presented in Table 2. The identification key to the genera of Readerielliopsidaceae is presented in a separate section below.
Table 2.
The main differences between the genera of the family Readerielliopsidaceae.
| Genera of the Family Readerielliopsidaceae | Habitats | Conidia | Conidiophores | Pycnidia |
|---|---|---|---|---|
| Alloscorias | Form hyphal masses, black, web-like colonies on leaves | Conidia are unicellular, oblong to ellipsoid or teardrop-shaped, hyaline, and smooth-walled | Conidiophores are reduced to conidiogenous cells | Pycnidia are spherical to subspherical |
| Fumagospora | Developing on the leaf surface, a network of dense, dark hyphae | Conidia are partially swollen, brown, of varying shapes, oblong or ellipsoid, with transverse and longitudinal septa | Conidiophores are very short, simple (unbranched) or weakly branched at the base, colorless (hyaline), cylindrical or filiform | Pycnidia are elongated, cylindrical or subcylindrical, resembling long stalked structures or “horns” |
| Phaeoxyphiella | Developing on the leaf surface, a network of dense, dark hyphae | Conidia with septa (up to 15) are large and strongly elongated | Conidiophores are hyaline, smooth, cylindrical or subcylindrical, separated by septa or simple | Pycnidia are dark brown or black, spherical, slightly flattened, pear-shaped, or conical |
| Readerielliopsis | Developing on the leaf surface, forming a network of dense, dark hyphae. Isolated from the fruiting bodies of tinder fungi | Conidia are single-celled, brown, smooth, and spherical to club-shaped | Conidiophores are reduced to conidiogenous cells | Pycnidia are brown, subspherical to pear-shaped |
| Scolecoxyphium | Developing on the leaf surface, a network of dense, dark hyphae | Conidia are hyaline, small, mostly elongated, oval, elliptical, or bacilliform (rod-shaped). Typically without septa | Conidiophores short, hyaline, cylindrical or flask-shaped | Pycnidia are irregularly cylindrical, straight or sinuous, short or long, without a sharp widening in the spore formation zone |
| Scorias | Form hyphal masses, black, web-like colonies on leaves, branches, and trunks of living trees | Conidia are small, hyaline, smooth-walled, unicellular, ellipsoid, cylindrical, and oval | Conidiophores short, poorly differentiated, hyaline | Pycnidia are superficial, large, dark brown or black. They have an elongated flask-shaped form with a protruding stoma at the apex |
| Xenomorphomyces | Developing on the surface of insects, (ants) | Conidial sporulation is hyaline, from round-oval to oval-elongated, often pear-shaped, unicellular, less commonly two- or three-celled | Conidiophores are solitary and may form clusters of conidia at the ends of the conidiophores. Branching conidiophores are observed | Pycnidia are absent. The formation of bed-like structures (clusters of conidiophores growing next to each other) can also be observed |
Physiology. Cultural properties of strains of X. formicartus grown on different media were examined. The growth test on various media of neutral pH showed that X. formicartus was able to grow on all the media tested, and the best hyphal growth was on SDA and MEA plates (Figure 2A,D). Growth reduction was clearly shown when grown on PCA plates (Figure 2C). Vegetative growth and conidial reproduction at various conditions of temperature were examined in our strains of X. formicartus. The growth tests at different temperatures showed that all the strains were able to grow in the range of 7–30 °C, with better growth at 25 °C. No visible hyphal growth was detected at either 2 °C or 35 °C (Figure 4). Examination at various temperatures suggests that X. formicartus is a mesophilic organism.
Figure 4.

Average colony diameter of Xenomorphomyces formicartus assessed on SDA after 25 d growth in the dark at temperatures ranging from 2 to 35 °C.
The isolate X. formicartus was tested for extracellular enzymatic activities. Hemolytic, phospholipase and chitinase activity was detected; ligninolytic and cellulolytic activity was not noted.
Pathology. To date, the observed colony of L. distinguendus in SFEDU BG is the only one found to be infected with X. formicartus. A survey of nearby areas and excavation of ant nests did not reveal any additional infected colonies. Even the ants from the colony of Lasius neglectus Van Loon, Boomsma & Andrasfalvy, 1990 found under a nearby stone showed no signs of infection with the fungus (more than fifty workers and several queens were examined under a stereomicroscope).
Over a four-year observation period, the proportion of infected individuals within the colony remained consistently close to 100% (groups of about fifty workers were selected several times a year). Fungal colonies on the cuticle were visible as brown-black oval bulbils of 0.1–0.6 mm in diameter and 0.03–0.2 mm thick (Figure 5). The fungal colonies grow chaotically on all parts of the ants’ bodies except the antennae and the distal sections of the legs. The most frequent growth sites were observed on the gaster and thorax. Sometimes the fungus covered almost the entire cuticle area, developing especially strongly on the abdomen. Young fungal colonies (we mean those that were visually smaller in diameter) appear lighter in color, whereas mature, larger colonies are darker and melanized (Figure 5A,B). In spring, it was observed that a higher proportion of ants carried younger (lighter and smaller) fungal colonies compared to the summer and autumn months. The percentage of uninfected (without visual signs of infection) individuals was also higher in spring.
Figure 5.

Fungal bulbils on the body of L. distinguendus ant. (A,B)—photomicrographs; (C–F)—SEM micrographs.
The maximum lifespan of the infected workers under laboratory condition was about 1–2 months, while the lifespan of the uninfected L. distinguendus workers was more than 8 months. The dead infected individuals were placed into the incubator with the uninfected ants, but they immediately took them to the marginal dry part of the incubator and did not come close to them for a long time. No infected workers were found within three months after the experiment.
Histological studies showed that the fungal colonies grow mostly on the surface of the cuticle. In two slides the penetration of the mycelium of the fungi under the cuticle of the gaster was observed: a small round hole under the center of the colony allowed X. formicartus to enter the body cavity (Figure 6C,D).
Figure 6.

Histological examination of fungal bulbils on the body parts of ant L. distinguendus. (A,B,D)—on the abdomen; (C,E,F)—on the legs.
The results of X-ray microtomographic examination of the body parts affected by the fungus (head, metasoma and gaster) show that the fungal mycelium is located directly under the integuments of the ants (Figure 7, marked in yellow). The “living” mycelium (when samples are dried using the critical point method) of the fungus and bulbils on the surface of the sclerites have different X-ray densities and are clearly distinguishable during rendering (see Supplementary Material Video S1). Part of the mycelium is located inside the bulbils. The microtomographic sections from volumetric rendering (Figure 7A, Supplementary Material Video S1) and the resulting 3D models (Figure 7B, Supplementary Material Video S1) clearly show the spongy structure of bulbils with mycelium embedded in them.
Figure 7.

µCT volume rendering (A) and 3D modeling (B) of the fungal structures on the abdomen of L. distinguendus. Red—fungal bulbils (on the surface of abdominal sclerites), yellow—fungal mycelium. Also see Supplementary Material (Video S1, video file).
Identification key to the genera of Readerielliopsidaceae
This key is a supplemented and modified version of the identification key to the genera of the family Readerielliopsidaceae by Haituk et al. [40].
| 1. Growing on ants, producing dense bulbils on the insect’s body ……………………………………………………………………………Xenomorphomyces |
| – Growing on leaves, forming superficial hyphal networks or mycelial masses ………………………………………………………………………………….2 |
| 2. Forming a delicate superficial weft of compact, dark-colored hyphae on leaves ………………………………………………………………………………3 |
| – Forming a black, arachnoid (web-like) mycelial aggregation on leaves ………………………………………………………………………………………….6 |
| 3. Pycnidia ampulliform (flask-shaped), subspherical to pyriform, brown ………………………………………………………………………………………..4 |
| – Pycnidia irregularly cylindric, straight or sinuous, short to elongate ………………………………………………………………………….Scolecoxyphium |
| 4. Conidia globose to clavate, aseptate (non-septate) ………………………………………………………………………….…………………..Readerielliopsis |
| – Conidia septate ………………………………………………………………………………………………………………………………………………………….5 |
| 5. Conidia thread-like (filiform), fusiform-ellipsoid, with up to 15 septa ………………………………………………………………………..Phaeoxyphiella |
| – Conidia oblong or ovoid, with 3–4 transverse septa …………………………………………………………………………….…………………..Fumagospora |
| 6. Ascostromata stalked; ascospores oblong to saccate, 3-septate, hyaline …………………………………………………………………………………Scorias |
| – Ascostromata sessile (without stalks); ascospores fusoid, 3-septate, enveloped by a mucilaginous sheath, hyaline ………………………….Alloscorias |
4. Discussion
The family Readerielliopsidaceae was separated into seven genera. A combined tree based on ITS + LSU + RPB2 partial sequences showed that X. formicartus is also included in Readerielliopsidaceae and is most closely related to Readerielliopsis guyanensis, R. fuscoporiae, Alloscorias syngonii and Scorias spp. Readerielliopsis fuscoporiae was isolated from basidiomata of Fuscoporia wahlbergii; R. guyanensis was isolated from a decaying leaf of an angiosperm [41,42]. The finds were made in South America (French Guiana). Alloscorias syngonii was isolated from living leaves of the plant Syngonium podophyllum in Thailand [40]. Species of the genus Scorias have been isolated from living leaves of diverse plant hosts (Coffea, Citrus, Gardenia, Ficus, Fagus, and others) in Brazil, Taiwan, the Philippines, South Africa, and North America [43].
X. formicartus has unique sequences of ITS, LSU and RPB2. The low degree of genetic relatedness and the formation of a distinct subclade indicate that the fungus should be classified as a separate genus.
This finding adds to the growing body of evidence that associations between fungi and ants have evolved independently multiple times across different lineages. Recently, Siedlecki et al. reached a similar conclusion with the discovery of Formicomyces microglobosus in Trichomeriaceae, which strengthened the hypothesis of multiple, independent evolution of ant-associated fungi [44]. Our phylogenetic data support this broader evolutionary pattern, suggesting that ant-associated lifestyles have arisen convergently in distinct fungal families.
Morphological characteristics also do not allow us to classify it among previously described species and genera of fungi. Xenomorphomyces is set apart from the rest of the Readerielliopsidaceae by the absence of pycnidia and by conidiophore branching.
The Capnodiales include fungi known as “sooty molds” with diverse lifestyles and nutrition habits. These fungi include saprobes, plant and animal pathogens, mycoparasites, rock-inhabiting fungi, lichenized fungi, and endophytes. The vast majority of the species of the Readerielliopsidaceae are inhabitants of plants. However, the majority of these fungi are not phytoparasitic. Their development is directly dependent on the excretions of sap-feeding insects, particularly aphids [24]. Fungi belonging to the genus Scorias utilize sugar-rich honeydew as their primary nutritional substrate. For instance, Scorias spongiosa in North America grows exclusively on the honeydew produced by the aphid Grylloprociphilus imbricator, which infests the American beech (Fagus grandifolia). Consequently, the distribution of these fungi is closely correlated not only with their host plants but also with their associated insect symbionts [43].
In the exoenzyme assays, X. formicartus exhibited hemolytic, phospholipase, and chitinase activities, whereas ligninolytic and cellulolytic activities were not detected. Although the presence of chitinase may suggest a potential for cuticle interaction, such enzymatic activity alone does not demonstrate entomopathogenicity. Therefore, the enzyme profile is more cautiously interpreted as indicative of an insect-associated lifestyle rather than of saprotrophic involvement in soil organic matter decomposition. However, the fungus should not be conclusively classified as an entomopathogen based solely on these biochemical data. Its ability to cause disease in ants, as well as its transmission pathways, remains to be confirmed by controlled infection experiments. Consequently, the observed fungal growth on L. distinguendus workers is best described as an association, and the possible pathogenic effects and transmission routes discussed above should be regarded as working hypotheses requiring further investigation.
Although the infection rate in the observed L. distinguendus colony is consistently close to 100%, the colony has successfully thrived for over five years (the last observations of the colony were conducted in April 2026). This indicates that X. formicartus probably has a moderate negative impact on the ants, suggesting low lethality. The absence of strong negative effects likely reflects a long evolutionary history of interaction between these fungi and their hosts. However, laboratory observations suggest that the fungus may shorten the ants’ lifespan, even if its overall impact in natural conditions seems limited. It also remains unclear whether the queen in the colony is infected and how the fungus affects its reproductive functions and life expectancy.
The fungus predominantly develops on the surface of the ant’s cuticle without invading the host’s body cavity or damaging internal organs.
In the later stages of development, the fungus can pierce the cuticle, penetrating the body cavity of the host. This can occur due to turgor pressure or with the help of secreted enzymes (this is indirectly confirmed by chitinase activity detected in laboratory cultures of X. formicartus), which aligns with observations of other entomopathogenic fungi, where the production of hydrolytic enzymes, including chitinases, is a key factor in cuticle penetration [45]. According to our observations, the stage at which the fungus invades the body cavity occurs approximately 3–4 months after infection and presumably causes temperate and potentially severe effects. Still, the period is long enough for new generations of worker ants to emerge and for the colony to grow. Nevertheless, the fungus causes stiffening of the limb joints, head, and mouthparts, as it often grows in these areas of the cuticle (Figure 5). This can severely impair the ants’ ability to move and feed.
Within an ant colony, infection is likely transmitted through direct contact between individuals. Since the observed colony is the only recorded case of parasitism by X. formicartus, we can only hypothesize that transmission between colonies may occur during nuptial flights via alates. The fact that close relatives (Lasius s. str.), whose colonies were in direct contact with the infected one, were not infected by the fungus may be due to high host specificity or to difficulties in colony-to-colony transmission. Infection of uninfected individuals of the same species could not be reproduced under experimental conditions, possibly because the ants discard infected cadavers and avoid close contact with them. It was also not possible to house live infected ants with uninfected ones, since individuals from different colonies exhibited high aggression towards each other, which in most cases resulted in the death of the infected individual; afterwards, the cadaver was also removed to the periphery of the incubator. It is possible that environmental conditions, especially humidity, may also influence the spread of infection under both laboratory and natural conditions.
When observed on the surface of the ant host, the lesions caused by X. formicartus and Aegeritella species show considerable morphological overlap, which can complicate visual identification during surveys. However, these two genera are well distinguishable with proper mycological examination; a detailed analysis of spore morphology and molecular markers provides clear diagnostic features. It is therefore a possibility that some reports of Aegeritella in Europe could be misidentified as instances of Xenomorphomyces. Therefore, any survey of ant-associated fungi should incorporate comprehensive mycological data to avoid misidentification, given that the external lesions are superficially similar [1].
Xenomorphomyces formicartus was isolated from multiple individuals within a single ant colony, with a relatively high prevalence of infection. Although this sampling limitation does not undermine the taxonomic validity of the new species and genus—which is firmly supported by morphological characters and multilocus phylogenetic analyses—it prevents us from making definitive statements about the fungus’s distribution, ecology, or pathogenesis. Accordingly, our observations on these aspects should be regarded as preliminary and interpreted with caution.
Since botanical gardens around the world are sources of biological invasions, it remains uncertain whether the presence of X. formicartus in the SFEDU BG represents a biological invasion or whether the species is native to the region. If some reports of Aegeritella from Eastern Europe turn out to be Xenomorphomyces, this would support the hypothesis that the fungus is native to southern Russia and adjacent regions. Nevertheless, further genetic and ecological studies are required to clarify the species’ origin and potential dispersal pathways.
5. Conclusions
The present work extends our knowledge of mycosis in ants, provides data on a new parasitic fungal species and genus, and evaluates its phylogenetic position showing its close relationship with representatives of Readerielliopsidaceae. Although the initial information on the spread of the parasite was obtained, the method of transmission of Xenomorphomyces requires further investigation. Our data indicate that the fungus can be clearly distinguished from other species based on phylogenetic and morphologic analyses and represents the novel species Xenomorphomyces formicartus in the genus Xenomorphomyces.
Acknowledgments
The research was carried out on the equipment of the Research Park of St. Petersburg State University (“Centre for Molecular and Cell Technologies”, project No. 109-34813, “Resource Centre for Microscopy and Microanalysis”, project No. 112-23465 and “Centre for X-ray Diffraction Studies”, project No. 103-23769) and the Core Facilities Center “Cell and Molecular Technologies in Plant Science” at the Komarov Botanical Institute RAS (St.-Petersburg, Russia).
Supplementary Materials
The following supporting information can be downloaded at: https://zenodo.org/records/21265283 (accessed on 10 August 2026). Video S1, video file of µCT cross-section and 3D reconstruction of fungal parts on the ant body.
Author Contributions
Conceptualization: D.S., I.K. and D.D. Methodology: V.I., D.S., I.K. and A.K. Formal analysis: V.I., D.S., I.K., D.D. and A.K. Investigation: V.I., I.K., D.S. and D.D. Resources: E.A., D.D. and I.K. Data curation: V.I., D.S., I.K., A.K., D.D. and E.A. Writing—original draft preparation: V.I., D.S., D.D. and A.K. Writing—review and editing: V.I., D.D., D.S. and A.K. Supervision: E.A., D.D. and I.K. All authors have read and agreed to the published version of the manuscript.
Data Availability Statement
The data are available from the corresponding author upon reasonable request.
Conflicts of Interest
The authors declare no conflicts of interest.
Funding Statement
This work was funded by the state task of Saint Petersburg State University, Project No. 132392751, and partly by the state task of the Komarov Botanical Institute RAS, No. 12401310-0829-3.
Footnotes
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Data Availability Statement
The data are available from the corresponding author upon reasonable request.
