ABSTRACT
The glymphatic system facilitates clearance of metabolic waste and pathological proteins from the brain, and its dysfunction has been implicated in neurodegenerative disease. The diffusion tensor imaging–analysis along the perivascular space (DTI‐ALPS) has been proposed as a non‐invasive MRI marker of glymphatic flow, although its biological specificity remains uncertain. This study aimed to identify the determinants of DTI‐ALPS and evaluate whether it primarily reflects white‐matter (WM) microstructure rather than glymphatic flow in the context of neurodegeneration. We examined 100 individuals referred to the Memory Clinic of the Policlinico Hospital in Milan for suspected dementia. All participants underwent a 3T‐MRI protocol including 3D‐T1‐weighted and 3D‐FLAIR imaging, double‐shell diffusion‐weighted imaging (b = 1000/2000 s/mm2), and multi‐echo gradient‐echo sequences for quantitative susceptibility mapping. Within standard DTI‐ALPS ROIs, we extracted DTI‐ALPS values together with fractional anisotropy (FA), mean diffusivity (MD), and mode of anisotropy (MA) at both b‐values, as well as neurite orientation and density imaging (NODDI) metrics, particularly the orientation dispersion index (ODI). WM microstructure was further characterized using the T1/FLAIR ratio and diamagnetic component of susceptibility (DCS). DTI‐ALPS correlated inversely with MA (r = −0.84 at b = 1000; r = −0.86 at b = 2000) and positively with ODI (r = 0.73). Moderate correlations with the T1/FLAIR ratio and DCS supported sensitivity to WM alterations. Factor analysis indicated that DTI‐ALPS clustered with MA and ODI rather than forming a distinct factor, suggesting that DTI‐ALPS primarily reflects WM diffusion dispersion and heterogeneity rather than glymphatic flow in the context of neurodegeneration.
Keywords: Alzheimer's disease, DTI‐ALPS, glymphatic system, NODDI, quantitative susceptibility mapping
Keypoints
DTI‐ALPS links strongly with mode of anisotropy at high b‐values and orientation dispersion, indicating crossing‐fibers loss.
DTI‐ALPS is moderately associated to T1/FLAIR ratio and diamagnetic susceptibility values, reflecting microstructural WM changes.
DTI‐ALPS reflects primarily WM features and may lack specificity for glymphatic flow in the context of neurodegeneration.
In a 100‐patient memory‐clinic cohort, DTI‐ALPS was evaluated along with diffusion and microstructural metrics. DTI‐ALPS correlated strongly with mode of anisotropy and orientation dispersion index, and moderately with T1/FLAIR ratio and diamagnetic susceptibility, indicating that DTI‐ALPS mainly reflects white‐matter diffusion complexity rather than glymphatic function in neurodegeneration.

1. Introduction
The glymphatic system (GS) is a brain‐wide perivascular network that mediates the flow and clearance of cerebrospinal fluid (CSF) and solutes through the brain parenchyma, facilitated by aquaporin‐4 channels on astrocytic endfeet (Rasmussen et al. 2018; Nedergaard and Goldman 2020; Kipnis 2024).
Its description in 2012 (Iliff et al. 2012) reshaped our understanding of cerebral fluid dynamics and was later complemented by the (re)discovery of meningeal lymphatic vessels in the dura (Aspelund et al. 2015; Louveau et al. 2015), as well as the identification of direct connections linking the subarachnoid space with dural perisinus compartments (Smyth et al. 2024), and the latter with the bone marrow within the thecal bone (Kolabas et al. 2023; Herisson et al. 2018; Bruner and Eisová 2024).
Together, these findings established the glymphatic–lymphatic model, with known roles in metabolic waste clearance (Rasmussen et al. 2022) and immune surveillance of the brain (Kipnis 2024; Rustenhoven and Kipnis 2022). Dysfunction of this system has been implicated in neurodegeneration, both through impaired clearance of pathological proteins such as amyloid‐β (Iliff et al. 2012) and tau (Lopes et al. 2024; Iliff et al. 2014), and through altered immune responses to neuropathology (Rustenhoven and Kipnis 2022), underscoring its potential as a target for pharmacological intervention. Consequently, the in vivo visualization and assessment of glymphatic flow in humans has become a prominent focus of research.
Although the expression study of the glymphatic system has often been applied to approaches aimed at broadly characterizing CSF dynamics—from its production in the choroid plexus to its movement along major subarachnoid vessels and its drainage into meningeal lymphatic vessels—the core of the GS lies in the parenchymal passage of fluid, which has also proven to be the most elusive to measure.
Contrast‐enhanced magnetic resonance imaging (CE‐MRI) following intrathecal gadolinium administration is regarded as the gold standard for in vivo evaluation of the GS (Eide and Ringstad 2015), as it enables quantification of CSF flow within the brain parenchyma under both physiological (Eide et al. 2021) and pathological conditions (Eide and Ringstad 2019). However, this technique is invasive, carries a risk of adverse effects and gadolinium‐related toxicity, and requires prolonged serial MRI acquisitions over several hours or even days.
CE‐MRI after intravenous gadolinium administration has been proposed as a less invasive alternative (Lee et al. 2021). However, this approach remains poorly standardized (Richmond et al. 2023), and its interpretation is complicated by the fact that contrast leakage from the vasculature into the central nervous system can occur through multiple pathways with distinct concentration–time profiles (Van Osch et al. 2024). Moreover, the high intravascular gadolinium signal often obscures subtler extravascular changes, further complicating image analysis (Van Osch et al. 2024).
As a result, recent studies have increasingly focused on finding non‐invasive biomarkers of GS function. Among these, the diffusion tensor imaging–analysis along the perivascular space (DTI‐ALPS) (Taoka et al. 2017) has gained popularity, mainly because of its technical simplicity. This method was developed to measure water diffusion along the perivascular spaces of medullary veins while reducing the confounding effect of white matter (WM) fiber orientation. Since its introduction in 2017, DTI‐ALPS has been widely used, especially in research on neurodegenerative diseases (Premi et al. 2024; Jiang et al. 2023; Xiao et al. 2024; Kamagata et al. 2022; Sacchi et al. 2024; Hsu et al. 2023; Huang et al. 2024; Wood et al. 2024; Gu et al. 2023). In these studies, lower DTI‐ALPS values have been linked cross‐sectionally to poorer cognitive performance and greater disability, and longitudinally to faster clinical decline over time, particularly in Alzheimer's disease (AD). These findings have been interpreted as supporting evidence that glymphatic dysfunction contributes to the pathogenesis of neurodegenerative diseases.
More recently, however, the actual sensitivity of this metric to glymphatic flow has been questioned (Ringstad 2024; Taoka et al. 2024). Emerging data suggest that the DTI‐ALPS index may be influenced by WM microstructural properties and damage (Schilling et al. 2025; Georgiopoulos et al. 2024; Wright et al. 2024), also considering its derivation from an anatomically complex region with numerous crossing fibers (Wedeen et al. 2008; Vos et al. 2012). This may be particularly relevant in the context of neurodegenerative dementias. Although traditionally viewed as disorders of the grey matter, these conditions are characterized by early and prominent WM degeneration and demyelination (Bozzali et al. 2001; Agosta et al. 2011). In AD, for instance, WM damage is widespread (Chen et al. 2023) and appears to follow a “retrogenesis” model, in which degenerative processes mirror the reverse sequence of developmental myelination (Stricker et al. 2009; Fornari et al. 2012).
Diffusion‐weighted imaging (DWI) is arguably the most sensitive technique to WM microstructural alteration. Most commonly, diffusion‐related parameters are derived using the diffusion tensor imaging (DTI) model. Among DTI–derived metrics, fractional anisotropy (FA) and mean diffusivity (MD) have been widely used to study WM changes in neurodegenerative diseases, typically showing a widespread decrease of FA and increase of MD compatible with degeneration of WM tracts (Chen et al. 2023). The mode of anisotropy (MA), a less commonly used DTI metric, complements FA by distinguishing between linear and planar diffusion patterns (Ennis and Kindlmann 2006). Whereas FA reflects the overall degree of diffusion anisotropy, MA characterizes the tensor shape and provides insight into local fiber geometry, particularly in regions of complex architecture (Bergamino et al. 2021).
DTI is a widely acknowledged model that, however, suffers from several limitations (Jones and Cercignani 2010), particularly the partial volume effect of extracellular free water and the bias introduced by fiber dispersion. The Neurite Orientation Dispersion and Density Imaging (NODDI) (Zhang et al. 2012) extends conventional DTI by modeling the diffusion signal into three biologically meaningful compartments: (i) the intra‐neurite compartment, characterized by restricted diffusion within neurites; (ii) the extra‐neurite compartment, reflecting hindered diffusion in the surrounding space; and (iii) the isotropic compartment, representing free water diffusion. Its key parameters—the neurite density index (NDI) and the orientation dispersion index (ODI)—quantify axonal density and angular variability of neurite orientation, respectively. Together, NDI and ODI provide more specific and interpretable insights into microstructural alterations, as they disentangle changes in neurite density and orientation dispersion that can produce similar effects on FA (Kamiya et al. 2020).
Structural MRI has been shown to provide complimentary information to DWI imaging in the assessment of WM degeneration (Raykov et al. 2025), with the advantage of ease of accessibility. In particular, two imaging indices originally developed in the context of neuroinflammatory and demyelinating diseases have been proposed as structural markers of WM damage with possible applications in neurodegenerative diseases. The first is the ratio of T1‐ to T2‐weighted (Glasser and Van Essen 2011) or fluid‐attenuated inversion recovery (FLAIR) signal intensity (Ganzetti et al. 2014; Cappelle et al. 2022), which has been shown to correlate with WM degeneration and poorer cognitive performance in AD and other neurodegenerative conditions (Lee et al. 2024; Operto et al. 2019).
The second is quantitative susceptibility mapping (QSM), an MRI technique that non‐invasively quantifies tissue magnetic susceptibility, primarily reflecting contributions from iron and myelin (Acosta‐Cabronero et al. 2013). However, conventional QSM does not resolve sub‐voxel variations in susceptibility, and opposing diamagnetic (myelin‐related) and paramagnetic (iron‐related) sources may partially cancel each other, leading to artificially low or near‐zero total values. To overcome this limitation, advanced algorithms have been developed to separate the diamagnetic (DCS) and paramagnetic (PCS) components of the QSM signal, enabling more specific assessment of myelin and iron content. This approach has shown promise as a potential tool for tracking pathological neurodegeneration across different brain regions and tissue types (Kiersnowski et al. 2025; Ahmed et al. 2023).
Against this background, in this study we sought to clarify the biological specificity of the DTI‐ALPS index by assessing the potential confounding influence of WM microstructural alterations in the context of neurodegenerative disease. We examined a cohort of patients with suspected dementia, enriched for AD cases, and evaluated associations between DTI‐ALPS and complementary MRI markers of WM damage within the same regions of interest (ROIs) used for DTI‐ALPS computation. Specifically, we first examined correlations with DTI metrics at b = 1000 and b = 2000 to assess how their relationship with DTI‐ALPS changes at higher diffusion weightings, which progressively suppress the contribution of freely diffusing water (Levendovszky and Meyer 2025). Then, we looked for a better explanation of these results with NODDI‐derived indices reflecting neurite density, orientation dispersion and extracellular free water. Lastly, we compared DTI‐ALPS with structural MRI markers of WM damage. This multimodal approach aimed to disentangle whether the DTI‐ALPS index primarily reflects WM microstructural damage rather than glymphatic flow.
2. Materials and Methods
2.1. Study Participants
A total of 100 participants were recruited from individuals referred to the Neurodegenerative Diseases Unit of the Fondazione IRCCS Ca’ Granda Ospedale Maggiore Policlinico in Milan (Italy) for suspected dementia.
To be eligible for inclusion, subjects were required to have undergone the same MRI protocol on a 3T Philips Achieva dStream scanner (Philips Healthcare, Best, The Netherlands). The MRI protocol included:
a volumetric high‐resolution T1‐weighted Spoiled Gradient Echo (T1‐SPGR);
a volumetric FLAIR;
a double‐shell (b = 1000 and b = 2000) DWI (single‐shot spin‐echo echo‐planar imaging) sequence acquired with opposite phase‐encoding directions (posterior–anterior and anterior–posterior);
a 3D multi‐echo gradient echo (GRE) sequence suitable for QSM. Detailed MRI acquisition parameters are provided in Table 1.
TABLE 1.
MRI protocol.
| Sequence/protocol | 3D‐T1 | 3D‐FLAIR | DWI (EPI) | QSM (multi‐echo GRE) |
|---|---|---|---|---|
| Plane | Sagittal | Sagittal | Axial | Axial |
| TR (ms) | 8.2 | 5000 | 8400 | 40 |
| TE (ms) | 3.8 | 300 | 85 | 5.4–36.6 |
| ΔTE (ms) | — | — | — | 5.2 |
| Echoes | 1 | 1 | 1 | 7 |
| TI (ms) | — | 1700 | — | — |
| Slice thickness (mm) | 1 | 1 | 2.5 | 1 |
| Voxel size (mm) | 1 | 1 | 2.5 | 1 |
| Flip angle (°) | 8 | 120 | 90 | 18 |
| Matrix | 240 × 240 | 240 × 240 | 96 × 96 | 224 × 224 |
| b‐values | — | — | 1000/2000 | — |
| Encoding directions | — | — | 32/32 | — |
| Phase encoding (main) | — | — | PA | — |
Abbreviations: DWI, diffusion‐weighted imaging; EPI, echo‐planar imaging; FLAIR, fluid‐attenuated inversion recovery; GRE, gradient echo; PA, postero‐anterior; QSM, quantitative susceptibility mapping; TE, echo time; TI, inversion time; TR, repetition time.
At baseline, all participants underwent a standardized diagnostic assessment, including detailed medical history, general and neurological examination, comprehensive neuropsychological testing and mini‐mental state examination (MMSE), MRI, and—when clinically indicated—CSF analysis and/or 18F‐fluorodeoxyglucose positron emission tomography (FDG‐PET) and/or amyloid‐PET.
Participants underwent clinical follow‐up every 6 months for at least 12 months. Based on longitudinal evaluation, individuals were classified as having a progressive neurodegenerative disorder (either of AD (Dubois et al. 2021; Jack et al. 2018) or non‐AD type (Rascovsky et al. 2011; Armstrong et al. 2013; McKeith et al. 2017; Gorno‐Tempini et al. 2011; Höglinger et al. 2017)) or a non‐degenerative condition, defined as stable mild cognitive impairment (sMCI) when no evidence of disease progression or longitudinal cognitive decline was observed.
Cognitively unimpaired (CU) participants presented with subjective cognitive complaints but exhibited no measurable impairment at formal neuropsychological testing nor evidence of an underlying neurodegenerative process after an extensive diagnostic work‐up.
Exclusion criteria included: (i) MRI evidence of significant cerebrovascular pathology, cerebral amyloid angiopathy, or intracranial mass lesions; (ii) diagnosis of normal pressure hydrocephalus; and (iii) presence of severe motion artifacts compromising image quality.
2.2. DWI Preprocessing, DTI Metrics Extraction and DTI‐ALPS Analysis
The DTI‐ALPS index was automatically computed using the FSL‐based pipeline developed by Liu et al. (2024).
Briefly, DWI was preprocessed in FSL (Smith et al. 2004; Jenkinson et al. 2012). After DICOM‐to‐NIfTI conversion, images were corrected for susceptibility‐induced field inhomogeneities and subject motion using topup (Andersson et al. 2003) and eddy (Andersson and Sotiropoulos 2016). A brain mask was then generated from the averaged b0 volumes using BET (Smith 2002).
Diffusion tensor fitting was performed with dtifit considering the b = 1000 and b = 2000 s/mm2 shells separately. This produced voxel‐wise maps of FA, MD, and full diffusion tensors for each b‐value.
FA maps were normalized to the high‐resolution FMRIB58_FA standard space image using linear and non‐linear registrations (FLIRT and FNIRT) (Jenkinson et al. 2002), and tensors were transformed into the same space with vector correction. Directional tensor components (Dxx, Dyy, Dzz) were extracted, and all indices were computed within default ROIs corresponding to 2.5‐mm‐radius spheres located in projection and association fibers of both hemispheres, as defined in the Johns Hopkins University (JHU) atlas.
The DTI‐ALPS index was calculated separately for each b‐value (referred to as DTI‐ALPS1000 and DTI‐ALPS2000 throughout the text) as the ratio between diffusivity along the x‐axis and the mean diffusivity along the orthogonal (y and z) axes in the four ROIs, yielding a global value. Mean FA and MD were also computed across the four ROIs for both b‐values (FA1000, FA2000, MD1000, and MD2000).
Additionally, MA was calculated following the formulation described by Ennis and Kindlmann (2006) to obtain mean global MA across the four ROIs for both diffusion weightings (MA1000 and MA2000). Beyond the magnitude of anisotropy captured by FA, the MA describes the tensor's geometric configuration, varying from linear (MA ≈+1) to planar (MA ≈−1) and isotropic (MA ≈0), and reflects the relative distribution of the diffusion eigenvalues.
2.3. NODDI Metrics Extraction
Microstructural diffusion parameters were estimated using the NODDI model (Zhang et al. 2012) implemented within the AMICO (Accelerated Microstructure Imaging via Convex Optimization) framework (Daducci et al. 2015). The AMICO pipeline was applied to DWI that had been preprocessed for eddy current, motion, and susceptibility‐induced distortion correction.
Within the AMICO framework, the NODDI model was fitted assuming three diffusion compartments: (i) an intra‐neurite compartment representing restricted diffusion within neurites, (ii) an extra‐neurite compartment modeling hindered diffusion in the surrounding tissue, and (iii) an isotropic compartment reflecting free water diffusion.
For each subject, the following parametric maps were generated: intracellular volume fraction, reflecting neurite density (NDI); orientation dispersion (ODI), quantifying neurite orientation variability; and isotropic volume fraction (F ISO), representing free water content.
NODDI maps were normalized to the high‐resolution FMRIB58_FA standard space image using the inverse transformation derived from the DTI registration step, ensuring alignment with other diffusion‐derived metrics. Average NDI, ODI, and F ISO values were then extracted across the four DTI‐ALPS ROIs.
2.4. T1 and FLAIR Images Preprocessing and T1/FLAIR Ratio Calculation
T1/FLAIR ratio maps were processed following a multistep pipeline available at https://github.com/treanus/KUL_NIS, as referenced in Cappelle et al. (2022). Briefly, intensity nonuniformities due to field inhomogeneity were corrected using the N4 bias field correction algorithm implemented in ANTs (Tustison et al. 2010). The bias‐corrected FLAIR images were then rigidly coregistered to the corresponding T1 volumes using antsRegistration.
T1 images were subsequently nonlinearly normalized to the MNI152 (ICBM) standard space, producing forward and inverse deformation fields.
To improve inter‐subject comparability, intensity calibration was carried out within brain masks of both the subject and the MNI template, as implemented in the calib‐nonlin3 procedure of the original code. During this step, the intensity histogram of each subject was nonlinearly adjusted to match that of the reference template, in order to standardize intensity distribution across subjects and minimize variations related to receiver gain or acquisition conditions. Calibrated T1 and FLAIR images were then combined voxel‐wise to compute T1/FLAIR ratio maps. These ratio maps were spatially normalized to MNI space using the forward deformation fields derived from T1 normalization, and the mean T1/FLAIR ratio was extracted within the four DTI‐ALPS ROIs (referred to as T1/FLAIRratio).
2.5. DCS Map Calculation
DCS maps were derived using the DECOMPOSE algorithm developed by Chen et al. (2021). In this method, QSM reconstructed at each echo is used to fit a three‐pool signal model representing paramagnetic (primarily iron‐related), diamagnetic (primarily myelin‐related), and magnetically neutral tissue compartments. Through this framework, the relative contributions of each magnetic source to the total susceptibility can be estimated voxel‐wise.
For the DECOMPOSE reconstruction, only the first five echoes were used, as later echoes typically exhibited lower signal‐to‐noise ratio and greater phase instability (Kiersnowski et al. 2025). DCS values were kept in their native units without normalization to a reference region, avoiding assumptions about brain areas presumed to be spared from neurodegenerative changes (Acosta‐Cabronero et al. 2013).
The resulting DCS maps were then coregistered to the corresponding native T1‐weighted images and normalized to the MNI152 (ICBM) standard space with the same modalities applied for the T1/FLAIRratio calculation. All maps were visually inspected to confirm image quality, artifact suppression, and spatial correspondence prior to inclusion in subsequent analyses.
Subsequently, a histogram‐based characterization of DCS values was performed. For each participant, the mean (DCSmean), median (DCSmed), standard deviation (DCSstd), kurtosis (DCSkurt), skewness (DCSskew), and the 10th (DCSp10), 25th (DCSp25), 75th (DCSp75), and 90th (DCSp90) percentiles were extracted by averaging values within the four DTI‐ALPS ROIs (Lancione et al. 2022).
2.6. Statistical Analysis
All statistical analyses were performed using R Studio (version 2025.09.1+401, R Foundation for Statistical Computing, Vienna, Austria). Data were first examined using descriptive statistics and visual inspection of distributions to assess normality.
Exploratory analyses were conducted to evaluate associations between the main study variables and demographic factors. Associations with age were tested using linear models (including both linear and quadratic terms to capture potential nonlinear effects), and associations with sex were assessed using two‐sample t‐tests. Pairwise correlations among continuous variables were computed using Pearson's correlation coefficients, with two‐tailed p‐values adjusted for multiple comparisons using the False Discovery Rate (FDR) correction. Statistical significance was set at p < 0.05 (FDR‐corrected).
Variables that showed significant correlations with DTI‐ALPS1000 after FDR correction were further analyzed using multivariate linear regression models after scaling, with the DTI‐ALPS1000 as the primary dependent variable, adjusting for age (linear and quadratic terms) and sex. Model performance was assessed by computing the adjusted coefficient of determination (adjR2), Akaike information criterion (AIC), and Bayesian information criterion (BIC).
An exploratory factor analysis (EFA) was then performed on the residuals of variables that remained significant after the regression analyses, thus using data adjusted for the effects of age and sex. We note that this represents a more aggressive correction, owing to potential shared variance between WM metrics and age. The suitability of the dataset for factor analysis was verified using the Kaiser–Meyer–Olkin (KMO) measure of sampling adequacy (threshold > 0.6, both overall and for each variable) and by confirming the absence of multicollinearity (pairwise r < 0.8). The EFA was conducted with the psych package in R (Revelle 2007). The optimal number of factors to retain was determined using the fa.parallel function based on parallel analysis. Factor extraction was performed with the minimum residual (minres) method, and factors were rotated using oblimin rotation to allow for correlated components. Model fit was assessed using Root Mean Square Error of Approximation (RMSEA), Tucker–Lewis Index (TLI), and Root Mean Square Residual (RMSR).
3. Results
3.1. Demographic and Clinical Characteristics of the Study Population
Of the 100 subjects included in the study, 20 were CU elderly subjects, 21 sMCI patients, 39 ad patients, 20 patients with non‐AD neurodegenerative conditions. The demographics for the whole cohort and each group separately are detailed in Table 2.
TABLE 2.
Clinical and demographical data of the patients.
| All | CU | sMCI | AD | Non‐AD | Statistic a | ||
|---|---|---|---|---|---|---|---|
| n = 100 | n = 20 | n = 21 | n = 39 | n = 20 | |||
| Age, years (Q1, Q3) | 73 (66, 76) | 69 (60, 75) | 74 (69, 76) | 72 (66.5, 76.5) | 75.5 (70.75, 78) | χ2 | 6.43 |
| p | 0.09 | ||||||
| Sex, females: males | 54:46 | 7:13 | 12:9 | 22:17 | 13:7 | χ2 | 4.01 |
| p | 0.26 | ||||||
| Years of education (Q1, Q3) | 13 (8, 18) | 13 (8, 18) | 8 (8, 13) | 13 (12, 18) | 13 (7.75, 14.25) | χ2 | 6.82 |
| p | 0.08 | ||||||
| MMSE at MRI (Q1, Q3) | 26 (23, 28) | 29 (28.75, 30) | 26 (25, 28) | 23 (21, 26) | 24.3 (22, 26) | χ2 | 40.72 |
| p | < 0.001 | ||||||
| FDG‐PET, Y:N | 46:54 | 8:12 | 9:12 | 15:24 | 14:6 | — | — |
| FBB‐PET, Y:N | 27:73 | 7:13 | 5:16 | 11:28 | 4:16 | — | — |
| CSF, Y:N | 48:52 | 5:15 | 8:13 | 24:15 | 11:9 | — | — |
Abbreviations: AD, Alzheimer's disease; CSF, cerebrospinal fluid; CU, cognitively unimpaired; FBB‐PET, fluorbetaben positron emission tomography; FDG‐PET, fluorodeoxyglucose positron emission tomography; MMSE, mini‐mental state examination; non‐AD, non‐Alzheimer's disease dementias; sMCI, stable mild cognitive impairment.
Continuous variables are reported as median (Q1, Q3), and categorical variables as counts. Between‐group differences were assessed using the Kruskal–Wallis test for age, years of education, and MMSE at MRI, and Chi‐squared test of independence test for sex. Statistically significant p‐values are shown in bold.
All DTI measures at both b‐values showed a linear effect of age (see Figures S1 and S2 for R 2 for linear and quadratic components), except for FA. ODI and NDI, but not FISO, showed a linear reduction with age.
Among structural metrics, T1/FLAIRratio tended to decrease and DCSkurt to increase quadratically with age, while DCSstd show a linear increase and DCSskew a linear decrease with age. All other DCS metrics showed no relation with age.
Many measures exhibited a main effect of sex. Particularly, FA1000, FA2000, MA1000, were higher in men, while DCSmean, DCSmed, DCSp10, DCSp25, DCSp75, DCSp90 and T1/FLAIRratio were higher in females. There were no sex differences in NODDI related metrics.
3.2. DTI‐ALPS1000 Is Inversely Associated With FA and MD in the DTI‐ALPS ROIs
Figure 1 shows the correlations between the main study variables, and Figure 2 displays the strongest associations through size‐ and symbol‐coded scatterplots. A reduction in the DTI‐ALPS1000 values was associated with an increase in FA1000 and MD1000 (r = −0.40; r = −0.56 respectively, all p FDR < 0.001). Stronger correlations were found with FA2000 and MD2000 (r = −0.53; r = −0.60 respectively, all p FDR < 0.001). After correction for age and sex in multivariate models, FA and MD at both b‐values remained significant predictors of DTI‐ALPS1000 (Table S1). AIC and BIC were consistently lower and adjR2 higher when considering measures extracted at b = 2000.
FIGURE 1.

Correlation matrix of variables of interest. Positive correlations are shown in red and negative correlations in blue. Only statistically significant associations after FDR correction are displayed. Pearson's r values are reported within the squares.
FIGURE 2.

Bubble plots illustrating relationships between DTI‐ALPS1000 and selected variables. Size scales with age, and marker shape denotes sex. Negative and positive correlations with DTI‐ALPS1000 are shown by blue and red regression lines, respectively, with shaded areas representing standard error.
3.3. DTI‐ALPS1000 Is Strongly and Inversely Associated With MA in DTI‐ALPS ROIs
A reduction in DTI‐ALPS1000 values was strongly associated with an increase in MA1000 and even higher increases in MA2000 (r = −0.84 and r = −0.86, respectively; all p FDR < 0.001). Both MA1000 and MA2000 remained robust independent predictors of ALPS after adjustment for age and sex (Table S1). Model fit indices were consistently lower, and explained variance higher, when measures derived from the b = 2000 shell were used.
3.4. DTI‐ALPS1000 Is Highly and Directly Associated With ODI in the ALPS ROIs
DTI‐ALPS1000 showed a strong positive correlation with ODI (r 0.73, p FDR < 0.001). We also found a weaker positive association with NDI (r 0.25, p FDR = 0.030). ODI also showed a strong negative correlation with MA at both b = 1000 and b = 2000 (r −0.91 and −0.86 respectively, all p FDR < 0.001).
In the multivariate model, only ODI remained a significant independent predictor of DTI‐ALPS1000 (Table S1).
3.5. DTI‐ALPS1000 Values Show Moderate Associations With Structural WM Markers
When considering structural MRI metrics, DTI‐ALPS1000 values showed a direct association with T1/FLAIRratio (r = 0.33, p FDR = 0.003) and with DCSskew (r = 0.24, p FDR = 0.037). On the other hand, DTI‐ALPS1000 showed a strong negative correlation with DCSstd (r = −0.50, p FDR < 0.001) and moderate association with DCSp75 and DCSp90 (r = −0.23, p FDR = 0.045; r = −0.28, p FDR = 0.012 respectively).
T1/FLAIRratio was negatively associated with MA1000 (r − 0.30, p FDR = 0.006 FDR), MA2000 (r − 0.29, p FDR = 0.010), MD1000 (r − 0.29, p FDR = 0.008) and MD2000 (r − 0.35, p FDR = 0.001), while positively correlated with ODI (r 0.27, p FDR = 0.018). DCSstd showed the opposite pattern: it was positively associated with MA1000 (r 0.38, p FDR < 0.001), MA2000 (r 0.36, p FDR < 0.001), FA1000 (r 0.27, p FDR = 0.016), FA2000 (r 0.30, p FDR = 0.008) and MD2000 (r 0.23, p FDR = 0.046), while negatively correlated with ODI (r − 0.31, p FDR = 0.006).
DCSstd, DCSp75, DCSp90 and T1/FLAIRratio remained significant predictors of DTI‐ALPS1000 after correcting for age and sex. By contrast, DCSskew became unsignificant (Table S1).
3.6. DTI‐ALPS1000 Associates With Diffusion Anisotropy Metrics in Factor Analysis
Prior to factor extraction, three variables were excluded: FA and MD at both b‐values, which showed low sampling adequacy (KMO < 0.6) and DCSp75, which exhibited high collinearity with DCSp90. ODI, MA1000, and MA2000 showed high collinearity, leading to a Heywood case when kept together in the model. However, as these were the primary variables of interest, rather than excluding one, we conducted two separate EFAs—one retaining ODI and the other retaining MA2000 (MA1000 was excluded due to high collinearity and its weaker correlation with DTI‐ALPS1000).
Considering ODI, a two‐factor solution provided the best fit to the data (χ 2 = 0.42, p = 0.52; RMSEA = 0.00, 90% CI = [0, 0.23]; TLI = 1.06; RMSR = 0.01), accounting for 54% of the total variance (Factor 1 = 29%; Factor 2 = 25%). Factor 1 loaded primarily on DTI‐ALPS1000 (β = 0.62) and ODI (β = 1.01), whereas Factor 2 was driven by DCSstd (β = 0.90) and DCSp90 (β = 0.42), with smaller contributions from T1/FLAIRratio (β = −0.33). The two factors were moderately correlated (r − 0.32), indicating partially overlapping latent constructs. The model demonstrated excellent fit and high factor score reliability (minimum correlation = 0.66–0.97).
When MA2000 was retained, results were almost alike. A two‐factor solution provided an adequate fit to the data (χ 2 = 2.6, p = 0.11; RMSEA = 0.13, 90% CI = [0, 0.33]; TLI = 0.90; RMSR = 0.02), explaining 56% of the total variance (Factor 1 = 33%; Factor 2 = 23%). Factor 1 loaded primarily on MA2000 (β = 1.03) and inversely on DTI‐ALPS1000 (β = −0.75), while Factor 2 was driven by DCSstd (β = 0.83) and, to a lesser extent, by DCSp90 (β = 0.48) and T1/FLAIRratio (β = −0.35). The two factors were moderately correlated (r 0.39), suggesting partially overlapping latent dimensions. Model fit indices indicated good adequacy, with a TLI of 0.895 and strong factor score reliability (minimum correlation = 0.53–0.99) (Figure 3).
FIGURE 3.

Exploratory factor analysis models including either ODI or MA2000. The two models show latent factors (F1, F2) and their standardized loadings onto diffusion and structural metrics. Dashed arrows indicate negative loadings, and numbers represent standardized factor loadings or inter‐factor correlations. Model including ODI (left); model including MA2000 (right).
4. Discussion
In this study, we aimed to characterize the determinants of DTI‐ALPS changes in neurodegenerative diseases using a clinical MRI protocol incorporating multi‐shell DWI and structural MRI. We found that DTI‐ALPS, calculated at b = 1000, is highly associated with DTI measure of diffusion dispersion, particularly MA and ODI, and demonstrates a moderate relationship with structural markers of WM microstructural damage, namely T1/FLAIRratio and DCS.
Overall, our findings suggest that DTI‐ALPS predominantly reflects loss of crossing fibers and WM microstructural damage within the ROIs where it is calculated, rather than serving as a direct measure of glymphatic function, as originally proposed. We substantiate this interpretation in greater detail in the following paragraphs.
In the original paper by Taoka, DTI‐ALPS was proposed as a marker of glymphatic activity based on the hypothesis that in an area “in which conformation of the perivascular space, represented by medullary veins on SWI, and the major white matter tracts were perpendicular to each other”, the “ratio of x‐axis diffusivity in the projection fibers (i.e., corticospinal tract) and association fibers (i.e., superior longitudinal fasciculus) area (Dxproj and Dxassoc) to the diffusivity which is perpendicular to them (Dyproj and Dzassoc) would express the influence of the water diffusion along the perivascular space which will reflect activity of the glymphatic system in the individual cases” (Taoka et al. 2017).
Therefore, for DTI‐ALPS to truly represent glymphatic activity, changes in the index should primarily arise from variations in x‐axis diffusivity (Dxx), which is hypothesized to be most sensitive to perivascular fluid movement.
Considering the main orientation of eigenvector‐2 in these tracts, the DTI‐ALPS index can be approximated as ≈λ2/λ3, assuming similar λ2/λ3 ratios for the two fiber types (Wright et al. 2024).
Consequently, and all else being equal, a reduction in glymphatic flow would be expected to increase FA anisotropy within DTI‐ALPS‐ROIs and decrease MD, due to the reduction of λ2 component. In addition, it would result in a reduction of radial asymmetry (i.e., the ratio between λ2 and λ3) (Schilling et al. 2025; Wright et al. 2024).
Even if reduced glymphatic flow were instead to result in fluid stagnation and an increase in free water content, the ensuing diffusion pattern would be expected to become more isotropic and once again characterized by decreased FA and increased MD. This latter pattern is typical of WM damage and axonal degeneration, where expansion of the extracellular space occurs secondary to axonal loss (Chen et al. 2023).
In our cohort, however, we observed an inverse correlation between DTI‐ALPS index and both FA and MD within the DTI‐ALPS ROIs, a finding that may initially seem counterintuitive. Nonetheless, a small number of prior studies have reported parallel increases in FA (Bergamino et al. 2021; The EDSD Study Group et al. 2014; Douaud et al. 2011; Mito et al. 2018) and MD (Douaud et al. 2011) in AD, Parkinson's disease, and progressive supranuclear palsy (Georgiopoulos et al. 2024), particularly in the centrum semiovale (Douaud et al. 2011).
These parallel increases of FA and MD have been attributed to the selective degeneration of crossing fibers—a hypothesis supported by multiple converging lines of evidence: (i) the centrum semiovale, from which DTI‐ALPS is derived, is densely packed with crossing bundles (Wedeen et al. 2008; Vos et al. 2012); (ii) AD is characterized by early degeneration of intracortical association fibers, with relative preservation of corticofugal and corticopetal tracts (Li et al. 2025); (iii) increases in FA and MD were accompanied by a corresponding rise in MA (Bergamino et al. 2021; The EDSD Study Group et al. 2014); (iv) quantitative tractography indicated that this effect was directly related to the selective sparing of motor‐related projection fibers (The EDSD Study Group et al. 2014; Douaud et al. 2011).
Indeed, the colocalized increase in MA within such crossing‐fiber regions suggests a transition of the WM bundles toward a more linear (“cigar‐like”) shape, consistent with the loss of crossing fibers.
In line with this evidence, we found that MA alone explained more than 75% of the variance in DTI‐ALPS, strongly suggesting that DTI‐ALPS primarily reflects the integrity of crossing fibers rather than perivascular diffusion.
Given the assumptions outlined above and the sensitivity of DTI to extracellular free water, a reduction in λ2 diffusivity—presumed to reflect perivascular glymphatic flow (Dxx)—could theoretically increase FA and thus MA. However, several lines of evidence argue against a substantial glymphatic contribution to the parallel changes observed in MA and DTI‐ALPS.
First, if DTI‐ALPS were sensitive to perivascular diffusion, its correlations with DTI metrics would be strongest at lower b‐values (i.e., b = 1000 s/mm2). Instead, we found stronger associations at higher b‐values (i.e., b = 2000 s/mm2), reinforcing the view that DTI‐ALPS is primarily driven by axonal microstructure, as already reported (Schilling et al. 2025; Georgiopoulos et al. 2024; Wright et al. 2024).
Second, perivascular spaces occupy only about 1% of the WM volume (Ringstad 2024; Barisano et al. 2022), representing a negligible fraction of the DTI‐ALPS ROIs too. Even assuming some sensitivity of DTI‐ALPS to glymphatic dynamics, the association with MA2000 should display considerable interindividual variability, given (i) expected differences in the relative contributions of glymphatic and microstructural effects across subjects, and (ii) opposing influences of glymphatic flow reduction on FA—potentially increasing FA through decreased λ 2 while simultaneously decreasing FA through extracellular fluid accumulation (Kamagata et al. 2022; Sacchi et al. 2024). This would produce greater scatter in the DTI‐ALPS–MA relationship than we observed.
Third, we found moderate correlations between DTI‐ALPS and structural MRI indices of WM integrity, particularly T1/FLAIRratio and DCSstd. Although the association between DTI‐ALPS and conventional DTI metrics was weaker—likely reflecting the greater sensitivity of diffusion imaging to subtle microstructural changes (Douaud et al. 2011)—these findings support a link between DTI‐ALPS and WM damage. Specifically, the positive correlation between DTI‐ALPS and the T1/FLAIRratio suggests that lower DTI‐ALPS values correspond to reduced tissue integrity. The T1/FLAIRratio has been proposed as a practical alternative to the T1/T2 ratio for assessing myelin‐related properties (Cappelle et al. 2022), given the widespread use of volumetric FLAIR over T2‐weighted sequences in current MRI protocols. Despite concerns about its specificity for myelin, based on comparisons with other myelin mapping modalities (Uddin et al. 2018; Arshad et al. 2017; Hagiwara et al. 2018) and post‐mortem studies (Righart et al. 2017; Nakamura et al. 2017; Sandrone et al. 2023), the T1/FLAIRratio remains a valuable composite marker of tissue integrity reflecting contributions from myelin, iron, calcium, axonal density, and extracellular content (Cappelle et al. 2022; Arshad et al. 2017). It has also been proposed as a sensitive, clinically accessible marker of WM damage in neurodegenerative disorders (Lee et al. 2024; Operto et al. 2019). Accordingly, its reduction in DTI‐ALPS ROIs supports the interpretation that WM damage confounds DTI‐ALPS metrics.
A similar interpretation applies to DCS. We hypothesized that lower DTI‐ALPS values would correspond to higher DCS—reflecting myelin loss, as previously reported in AD (Ahmed et al. 2023). Although a trend toward increased mean and median DCS within DTI‐ALPS ROIs was observed, it did not reach statistical significance. However, DTI‐ALPS showed a strong inverse correlation with DCSstd and a moderate inverse correlation with DCSp90. Together, these findings suggest that (i) a reduction of DTI‐ALPS is associated with a shift toward higher DCS values, consistent with demyelination (Ahmed et al. 2023; Uchida et al. 2022), and (ii) lower DTI‐ALPS coincides with greater DCS variability, indicative of increased microstructural heterogeneity, in agreement with T1/FLAIRratio results. While susceptibility measures can be affected by fiber orientation relative to the main magnetic field, averaging across two orthogonal ROI sets likely minimized this confound (Lancione et al. 2017).
Fourth, DTI‐ALPS showed a strong positive correlation with ODI, which was itself closely related to MA. Reduced ODI has been consistently reported in neurodegenerative diseases and interpreted as a consequence of selective loss of crossing fibers (Kamiya et al. 2020; Slattery et al. 2017; Zhang et al. 2018), leading to greater alignment of remaining axons. ODI has also demonstrated stronger histological validity than DTI metrics (Grussu et al. 2017; Schilling et al. 2018), likely because it corrects for the biasing effect of extracellular free water. Moreover, as ODI derives from the neurite compartment within the NODDI framework, its relationship with DTI‐ALPS reinforces the view that ALPS primarily captures axonal geometry rather than perivascular flow.
While it remains theoretically possible that microscopically thin, preferentially oriented PVS could contribute to the diffusion signal that NODDI classifies as ‘intra‐neurite’, such structures would require sufficient density, volume fraction, and signal persistence at high b‐values to substantially influence ODI estimation. Given the relatively small volumetric contribution of PVS within white matter (Ringstad 2024; Barisano et al. 2022) and the predominantly free‐water‐like diffusion properties of PVS fluid (Sepehrband et al. 2019), their contribution to the high b‐value neurite compartment signal is likely limited.
Although MA, ODI, and structural indices of WM damage accounted for most of the DTI‐ALPS variance, a small portion remained unexplained. This residual variance, however, should not automatically be attributed to glymphatic activity, as it may instead reflect unmodelled biological or methodological factors.
Indeed, EFA clearly revealed that DTI‐ALPS do not form a distinct component but instead cluster with MA and ODI, indicating that it largely reflects neurite orientation and diffusion coherence rather than a separate physiological process.
Moreover, it is important to note that the DTI‐ALPS index primarily reflects the radial asymmetry of underlying tracts (Schilling et al. 2025; Wright et al. 2024), which depends not only on crossing fibers but also on microscopic features of the fascicles—such as dispersion anisotropy and axonal undulation. These microscopic features may be less effectively detected by MA and ODI, requiring more advanced modeling taking into account also non‐isotropic dispersion (Tariq et al. 2016).
Finally, the small fraction of variance left unexplained by MA, ODI, and structural MRI markers may simply reflect measurement noise. In this context, the imperfect alignment between WM tracts and reference axes merits specific consideration. Because diffusion tensor eigenvectors rarely coincide exactly with these axes, even minor misalignments can introduce discrepancies between MA and DTI‐ALPS despite their shared microstructural basis. To verify this assumption, we calculated a modified version of MA substituting eigenvalues with corresponding diffusion axes in the ROIs, which led to an increase in the proportion of DTI‐ALPS variance explained—particularly at b = 2000—further supporting their common structural origin (Table S2).
5. Limitations
This study has several limitations. First, diffusion data were acquired with a maximum b‐value of 2000 s/mm2, which may not fully suppress the contribution of freely diffusing water. Higher b‐values could enhance the sensitivity of diffusion metrics to tissue microstructure; however, the acquisition protocol was constrained by clinical MRI parameters to ensure feasibility in a patient population.
Second, the NODDI model used here assumes isotropic orientation dispersion, and thus does not account for potential anisotropic components that may better capture the complexity of white matter fiber geometry. Incorporating more advanced diffusion models (i.e., Bingham NODDI) (Tariq et al. 2016) could provide a more accurate description of microstructural dispersion patterns. Moreover, it could test if DTI‐ALPS is able to capture reduction of dispersion linked to anisotropic components, as has been proposed.
A third limitation is the need to extract metrics from very small ROIs to maintain consistency with previous DTI‐ALPS studies. This may have increased variability and reduced sensitivity for both diffusion and structural measures, particularly susceptibility‐based metrics.
Finally, the cross‐sectional design limits the ability to determine how WM microstructural confounders influence the predictive validity of the DTI‐ALPS index over time. Longitudinal studies are needed to determine whether the DTI‐ALPS index maintains its predictive value in this context.
6. Conclusions
In conclusion, our study demonstrates that DTI‐ALPS measures are strongly associated with WM microstructural integrity, as assessed through both DTI and structural MRI. Specifically, our findings suggest that DTI‐ALPS metrics primarily reflect loss of crossing fibers and increased microstructural heterogeneity within DTI‐ALPS ROIs, challenging its interpretation as a direct marker of glymphatic activity as originally proposed by Taoka. Nevertheless, our intention is not to fully dismiss ALPS—which remains the only putative glymphatic marker tested against intrathecal gadolinium (Zhang et al. 2021)—but rather to emphasize the need for further validation and consensus. The sensitivity of the DTI‐ALPS index to WM geometry (i.e., diffusion asymmetry) may still prove valuable for investigating WM damage in neurodegenerative diseases. Moreover, given the dependence of glymphatic clearance on normal microstructural anatomy, DTI‐ALPS could still be proved a useful marker of glymphatic dysfunction secondary to WM injury, provided its correlation with gadolinium clearance in intrathecal CE‐MRI is confirmed. However, current evidence—including our own—suggests that DTI‐ALPS is influenced by WM microstructure and may not reliably represent a direct marker of glymphatic flow.
Author Contributions
L.S. and A.A. conceived and designed the study. L.S. interpreted the data, performed the statistical analyses, and drafted the manuscript. G.F. and G.B. conducted neuroimaging data preprocessing and analysis. M.C. and G.B. of revised the content of the manuscript as field experts. T.C., L.G., M.D.R., A.P., and M.P. assisted with the acquisition of clinical data. E.S. and F.T. acquired the MRI data. A.A., M.B., and D.G. critically revised the manuscript for important intellectual content. All authors read and approved the final version of the manuscript.
Funding
This research was supported by grants from the Italian Ministry of Health (Ricerca Corrente to A.A. and D.G., Grant PNRR‐POC‐2023‐12377354 to D.G.) and from the Fondazione Regionale per la Ricerca Biomedica (FRRB)‐UNMET MEDICAL NEEDS—Regione Lombardia (Acronym: MAINSTREAM, Project ID: 3430931) to T.C. Moreover, this work was supported by Fondazione BCC Milano and Associazione ‘Centro Dino Ferrari’ ETS, Milan, Italy.
Ethics Statement
All procedures performed in studies involving human participants were in accordance with the ethical standards of the institutional and/or national research committee and with the 1964 Helsinki declaration and its later amendments or comparable ethical standards. Written informed consent was obtained from all participants or their legal proxies. The study was approved by the local Ethics Committee (Comitato Etico Area 2 Milano, approval N 859_2021, dated 14 September 2021).
Conflicts of Interest
The authors declare no conflicts of interest.
Supporting information
Figure S1: Scatterplot grid showing associations between diffusion‐derived metrics and age. Each panel depicts the relationship between a diffusion metric and age, modeled with both linear and quadratic components. Solid lines represent fitted polynomial regression curves.
Figure S2: Scatterplot grid showing associations between structural MRI‐derived metrics and age. Each panel depicts the relationship between a structural MRI metric and age, modeled with both linear and quadratic components. Solid lines represent fitted polynomial regression curves.
Table S1: Multivariate analysis results with DTI‐ALPS1000 as dependent variable.
Table S2: Multivariate analysis for modified mode of anisotropy using DTI‐ALPS1000 as dependent variable.
Acknowledgments
We thank Mauro Costagli for his valuable support in the interpretation of the quantitative susceptibility mapping data.
Data Availability Statement
The data that support the findings of this study are available from the corresponding author upon reasonable request.
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Figure S1: Scatterplot grid showing associations between diffusion‐derived metrics and age. Each panel depicts the relationship between a diffusion metric and age, modeled with both linear and quadratic components. Solid lines represent fitted polynomial regression curves.
Figure S2: Scatterplot grid showing associations between structural MRI‐derived metrics and age. Each panel depicts the relationship between a structural MRI metric and age, modeled with both linear and quadratic components. Solid lines represent fitted polynomial regression curves.
Table S1: Multivariate analysis results with DTI‐ALPS1000 as dependent variable.
Table S2: Multivariate analysis for modified mode of anisotropy using DTI‐ALPS1000 as dependent variable.
Data Availability Statement
The data that support the findings of this study are available from the corresponding author upon reasonable request.
