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. 2004 Sep;10(9):1444–1448. doi: 10.1261/rna.7570804

FIGURE 3.

FIGURE 3.

Putative cytidine deaminases acting on RNA in C. elegans. An unrooted tree is presented consisting of nine putative cytidine deaminases of C. elegans and the E. coli cytidine deaminase. Transcript numbers of all nine C. elegans genes are given. EcCDA1–150, amino acid 1–150 of E. coli cytidine deaminase. First a multiple sequence alignment of the cytidine deaminase domains was generated by the Superfamily alignment program (http://supfam.org/SUPERFAMILY/). The tree was then built with a phylogenetic tree program (http://www.ebi.ac.uk/clustalw/) using the neighbor joining method, setting on Kimura correction of distances. 0.1, 0.1 substitutions per 100 residues.