TABLE 1.
A. gambiae satellite families identifiedin silico
| Hits to database
|
||||
|---|---|---|---|---|
| Satellite familya | Exemplary scaffold | % GC | Male only | Whole genome |
| AgY53A | AAAB01005036 | 31 | 25 | 25 |
| AgY53B | AAAB01004290 | 34 | 23 | 24 |
| Ag53C | AAAB01007101 | 33 | 5 | 24 |
| Ag72 | AAAB01003201 | 43 | 1 | 90 |
| Ag93 | AAAB01003426 | 36 | 30 | 436 |
| Ag113 | AAAB01003510 | 43 | 3 | 119 |
| Ag404 | AAAB01001799 | 44 | 4 | 38 |
| AgY477 | AAAB01004782 | 41 | 14 | 15 |
| AgComplex-Ab | AAAB01004063 | 60 | 1 | 6 |
| AgComplex-Bc | AAAB01002959 | 45 | 8 | 108 |
Satellites from the Y chromosome are in italics.
a
Family names indicate monomer size in base pairs.
b
Composed of irregularly alternating short runs of 66- and 102-bp monomers, which differ by a 36-bp indel.
c
Composed of a 54-bp unit repeat, with short irregular runs of 64-bp units that differ by a 10-bp tandem duplication.