Skip to main content
Genetics logoLink to Genetics
. 1999 Sep;153(1):333–338. doi: 10.1093/genetics/153.1.333

RAPD-based genetic linkage maps of Tribolium castaneum.

R W Beeman 1, S J Brown 1
PMCID: PMC1460736  PMID: 10471716

Abstract

A genetic map of the red flour beetle (Tribolium castaneum) integrating molecular with morphological markers was constructed using a backcross population of 147 siblings. The map defines 10 linkage groups (LGs), presumably corresponding to the 10 chromosomes, and consists of 122 randomly amplified polymorphic DNA (RAPD) markers, six molecular markers representing identified genes, and five morphological markers. The total map length is 570 cM, giving an average marker resolution of 4.3 cM. The average physical distance per genetic distance was estimated at 350 kb/cM. A cluster of loci showing distorted segregation was detected on LG9. The process of converting RAPD markers to sequence-tagged site markers was initiated: 18 RAPD markers were cloned and sequenced, and single-strand conformational polymorphisms were identified for 4 of the 18. The map positions of all 4 coincided with those of the parent RAPD markers.

Full Text

The Full Text of this article is available as a PDF (101.2 KB).

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Antolin M. F., Bosio C. F., Cotton J., Sweeney W., Strand M. R., Black W. C., 4th Intensive linkage mapping in a wasp (Bracon hebetor) and a mosquito (Aedes aegypti) with single-strand conformation polymorphism analysis of random amplified polymorphic DNA markers. Genetics. 1996 Aug;143(4):1727–1738. doi: 10.1093/genetics/143.4.1727. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. Beeman R. W., Stauth D. M. Rapid cloning of insect transposon insertion junctions using 'universal' PCR. Insect Mol Biol. 1997 Feb;6(1):83–88. doi: 10.1046/j.1365-2583.1997.00159.x. [DOI] [PubMed] [Google Scholar]
  3. Beeman R. W., Thomson M. S., Clark J. M., DeCamillis M. A., Brown S. J., Denell R. E. Woot, an active gypsy-class retrotransposon in the flour beetle, Tribolium castaneum, is associated with a recent mutation. Genetics. 1996 May;143(1):417–426. doi: 10.1093/genetics/143.1.417. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Brown S. J., Parrish J. K., Denell R. E., Beeman R. W. Genetic control of early embryogenesis in the red flour beetle, Tribolium castaneum. Am Zool. 1994;34(3):343–352. doi: 10.1093/icb/34.3.343. [DOI] [PubMed] [Google Scholar]
  5. Cai D., Kleine M., Kifle S., Harloff H. J., Sandal N. N., Marcker K. A., Klein-Lankhorst R. M., Salentijn E. M., Lange W., Stiekema W. J. Positional cloning of a gene for nematode resistance in sugar beet. Science. 1997 Feb 7;275(5301):832–834. doi: 10.1126/science.275.5301.832. [DOI] [PubMed] [Google Scholar]
  6. Hunt G. J., Page R. E., Jr Linkage map of the honey bee, Apis mellifera, based on RAPD markers. Genetics. 1995 Mar;139(3):1371–1382. doi: 10.1093/genetics/139.3.1371. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Kesseli R. V., Paran I., Michelmore R. W. Analysis of a detailed genetic linkage map of Lactuca sativa (lettuce) constructed from RFLP and RAPD markers. Genetics. 1994 Apr;136(4):1435–1446. doi: 10.1093/genetics/136.4.1435. [DOI] [PMC free article] [PubMed] [Google Scholar]
  8. Knapik E. W., Goodman A., Ekker M., Chevrette M., Delgado J., Neuhauss S., Shimoda N., Driever W., Fishman M. C., Jacob H. J. A microsatellite genetic linkage map for zebrafish (Danio rerio). Nat Genet. 1998 Apr;18(4):338–343. doi: 10.1038/ng0498-338. [DOI] [PubMed] [Google Scholar]
  9. Livak K. J. Organization and mapping of a sequence on the Drosophila melanogaster X and Y chromosomes that is transcribed during spermatogenesis. Genetics. 1984 Aug;107(4):611–634. doi: 10.1093/genetics/107.4.611. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Orita M., Iwahana H., Kanazawa H., Hayashi K., Sekiya T. Detection of polymorphisms of human DNA by gel electrophoresis as single-strand conformation polymorphisms. Proc Natl Acad Sci U S A. 1989 Apr;86(8):2766–2770. doi: 10.1073/pnas.86.8.2766. [DOI] [PMC free article] [PubMed] [Google Scholar]
  11. Postlethwait J. H., Johnson S. L., Midson C. N., Talbot W. S., Gates M., Ballinger E. W., Africa D., Andrews R., Carl T., Eisen J. S. A genetic linkage map for the zebrafish. Science. 1994 Apr 29;264(5159):699–703. doi: 10.1126/science.8171321. [DOI] [PubMed] [Google Scholar]
  12. Segre J. A., Nemhauser J. L., Taylor B. A., Nadeau J. H., Lander E. S. Positional cloning of the nude locus: genetic, physical, and transcription maps of the region and mutations in the mouse and rat. Genomics. 1995 Aug 10;28(3):549–559. doi: 10.1006/geno.1995.1187. [DOI] [PubMed] [Google Scholar]
  13. Stephan W., Mitchell S. J. Reduced levels of DNA polymorphism and fixed between-population differences in the centromeric region of Drosophila ananassae. Genetics. 1992 Dec;132(4):1039–1045. doi: 10.1093/genetics/132.4.1039. [DOI] [PMC free article] [PubMed] [Google Scholar]
  14. Stuart J. J., Mocelin G. Cytogenetics of chromosome rearrangements in Tribolium castaneum. Genome. 1995 Aug;38(4):673–680. doi: 10.1139/g95-085. [DOI] [PubMed] [Google Scholar]
  15. Williams J. G., Kubelik A. R., Livak K. J., Rafalski J. A., Tingey S. V. DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res. 1990 Nov 25;18(22):6531–6535. doi: 10.1093/nar/18.22.6531. [DOI] [PMC free article] [PubMed] [Google Scholar]

Articles from Genetics are provided here courtesy of Oxford University Press

RESOURCES