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. 1996 Sep 15;24(18):3601–3606. doi: 10.1093/nar/24.18.3601

Identification of a 4.5S-like ribonucleoprotein in maize mitochondria.

A J Yang 1, R M Mulligan 1
PMCID: PMC146122  PMID: 8836189

Abstract

Escherichia coli has a ribonucleoprotein complex that is composed of a 114 nucleotide 4.5S RNA and a 48 kDa polypeptide (P48) that has been demonstrated to function in translation and in the secretion of periplasmic polypeptides. A small RNA of approximately 220 nucleotides has been identified in maize mitochondria that includes sequence identity with the highly conserved domain of the bacterial 4.5S RNA. The transcript is mitochondrially encoded and maps to a region upstream of the gene for ATP synthase subunit I. The mitochondrial 4.5S-like RNA has 15 nucleotides of sequence identity with the highly conserved region of the bacterial 4.5S RNA. Sucrose density gradient centrifugation of a maize mitochondrial lysate demonstrated that the 4.5S RNA is a component of a high molecular weight complex under native conditions, and could be disrupted by phenol. Anti-P48 immune serum immuno-precipitated a mitochondrial protein of approximately 48 kDa, and RNA gel blot analysis of the immunoprecipitation reaction indicated that the 4.5S-like RNA co-immuno-precipitated with the 48 kDa polypeptide. The mitochondrial 4.5S ribonucleoprotein complex could function in translation or protein targeting.

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Selected References

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  1. Aiba H., Adhya S., de Crombrugghe B. Evidence for two functional gal promoters in intact Escherichia coli cells. J Biol Chem. 1981 Nov 25;256(22):11905–11910. [PubMed] [Google Scholar]
  2. Bauer M., Behrens M., Esser K., Michaelis G., Pratje E. PET1402, a nuclear gene required for proteolytic processing of cytochrome oxidase subunit 2 in yeast. Mol Gen Genet. 1994 Nov 1;245(3):272–278. doi: 10.1007/BF00290106. [DOI] [PubMed] [Google Scholar]
  3. Brown S. 4.5S RNA: does form predict function? New Biol. 1991 May;3(5):430–438. [PubMed] [Google Scholar]
  4. Brown S., Fournier M. J. The 4.5 S RNA gene of Escherichia coli is essential for cell growth. J Mol Biol. 1984 Sep 25;178(3):533–550. doi: 10.1016/0022-2836(84)90237-7. [DOI] [PubMed] [Google Scholar]
  5. Brown S. Mutations in the gene for EF-G reduce the requirement for 4.5S RNA in the growth of E. coli. Cell. 1987 Jun 19;49(6):825–833. doi: 10.1016/0092-8674(87)90620-9. [DOI] [PubMed] [Google Scholar]
  6. Brown S., Thon G., Tolentino E. Genetic selection and DNA sequences of 4.5S RNA homologs. J Bacteriol. 1989 Dec;171(12):6517–6520. doi: 10.1128/jb.171.12.6517-6520.1989. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Brown S. Time of action of 4.5 S RNA in Escherichia coli translation. J Mol Biol. 1989 Sep 5;209(1):79–90. doi: 10.1016/0022-2836(89)90171-x. [DOI] [PubMed] [Google Scholar]
  8. Costanzo M. C., Fox T. D. Control of mitochondrial gene expression in Saccharomyces cerevisiae. Annu Rev Genet. 1990;24:91–113. doi: 10.1146/annurev.ge.24.120190.000515. [DOI] [PubMed] [Google Scholar]
  9. Fauron C. M., Havlik M. The BamHI, XhoI, SmaI restriction enzyme maps of the normal maize mitochondrial genome genotype B37. Nucleic Acids Res. 1988 Nov 11;16(21):10395–10396. doi: 10.1093/nar/16.21.10395. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Franklin A. E., Hoffman N. E. Characterization of a chloroplast homologue of the 54-kDa subunit of the signal recognition particle. J Biol Chem. 1993 Oct 15;268(29):22175–22180. [PubMed] [Google Scholar]
  11. Glick B. S., Brandt A., Cunningham K., Müller S., Hallberg R. L., Schatz G. Cytochromes c1 and b2 are sorted to the intermembrane space of yeast mitochondria by a stop-transfer mechanism. Cell. 1992 May 29;69(5):809–822. doi: 10.1016/0092-8674(92)90292-k. [DOI] [PubMed] [Google Scholar]
  12. Gropp R., Gropp F., Betlach M. C. Association of the halobacterial 7S RNA to the polysome correlates with expression of the membrane protein bacterioopsin. Proc Natl Acad Sci U S A. 1992 Feb 15;89(4):1204–1208. doi: 10.1073/pnas.89.4.1204. [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. Hartl F. U., Neupert W. Protein sorting to mitochondria: evolutionary conservations of folding and assembly. Science. 1990 Feb 23;247(4945):930–938. doi: 10.1126/science.2406905. [DOI] [PubMed] [Google Scholar]
  14. Jensen C. G., Brown S., Pedersen S. Effect of 4.5S RNA depletion on Escherichia coli protein synthesis and secretion. J Bacteriol. 1994 May;176(9):2502–2506. doi: 10.1128/jb.176.9.2502-2506.1994. [DOI] [PMC free article] [PubMed] [Google Scholar]
  15. Krishnasamy S., Grant R. A., Makaroff C. A. Subunit 6 of the Fo-ATP synthase complex from cytoplasmic male-sterile radish: RNA editing and NH2-terminal protein sequencing. Plant Mol Biol. 1994 Jan;24(1):129–141. doi: 10.1007/BF00040580. [DOI] [PubMed] [Google Scholar]
  16. Li X., Henry R., Yuan J., Cline K., Hoffman N. E. A chloroplast homologue of the signal recognition particle subunit SRP54 is involved in the posttranslational integration of a protein into thylakoid membranes. Proc Natl Acad Sci U S A. 1995 Apr 25;92(9):3789–3793. doi: 10.1073/pnas.92.9.3789. [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. Lu B., Hanson M. R. A single homogeneous form of ATP6 protein accumulates in petunia mitochondria despite the presence of differentially edited atp6 transcripts. Plant Cell. 1994 Dec;6(12):1955–1968. doi: 10.1105/tpc.6.12.1955. [DOI] [PMC free article] [PubMed] [Google Scholar]
  18. Luirink J., Dobberstein B. Mammalian and Escherichia coli signal recognition particles. Mol Microbiol. 1994 Jan;11(1):9–13. doi: 10.1111/j.1365-2958.1994.tb00284.x. [DOI] [PubMed] [Google Scholar]
  19. Luirink J., High S., Wood H., Giner A., Tollervey D., Dobberstein B. Signal-sequence recognition by an Escherichia coli ribonucleoprotein complex. Nature. 1992 Oct 22;359(6397):741–743. doi: 10.1038/359741a0. [DOI] [PubMed] [Google Scholar]
  20. Luirink J., ten Hagen-Jongman C. M., van der Weijden C. C., Oudega B., High S., Dobberstein B., Kusters R. An alternative protein targeting pathway in Escherichia coli: studies on the role of FtsY. EMBO J. 1994 May 15;13(10):2289–2296. doi: 10.1002/j.1460-2075.1994.tb06511.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  21. Miller J. D., Bernstein H. D., Walter P. Interaction of E. coli Ffh/4.5S ribonucleoprotein and FtsY mimics that of mammalian signal recognition particle and its receptor. Nature. 1994 Feb 17;367(6464):657–659. doi: 10.1038/367657a0. [DOI] [PubMed] [Google Scholar]
  22. Mulligan R. M., Lau G. T., Walbot V. Numerous transcription initiation sites exist for the maize mitochondrial genes for subunit 9 of the ATP synthase and subunit 3 of cytochrome oxidase. Proc Natl Acad Sci U S A. 1988 Nov;85(21):7998–8002. doi: 10.1073/pnas.85.21.7998. [DOI] [PMC free article] [PubMed] [Google Scholar]
  23. Mulligan R. M., Leon P., Walbot V. Transcriptional and posttranscriptional regulation of maize mitochondrial gene expression. Mol Cell Biol. 1991 Jan;11(1):533–543. doi: 10.1128/mcb.11.1.533. [DOI] [PMC free article] [PubMed] [Google Scholar]
  24. Phillips G. J., Silhavy T. J. The E. coli ffh gene is necessary for viability and efficient protein export. Nature. 1992 Oct 22;359(6397):744–746. doi: 10.1038/359744a0. [DOI] [PubMed] [Google Scholar]
  25. Poritz M. A., Bernstein H. D., Strub K., Zopf D., Wilhelm H., Walter P. An E. coli ribonucleoprotein containing 4.5S RNA resembles mammalian signal recognition particle. Science. 1990 Nov 23;250(4984):1111–1117. doi: 10.1126/science.1701272. [DOI] [PubMed] [Google Scholar]
  26. Ribes V., Römisch K., Giner A., Dobberstein B., Tollervey D. E. coli 4.5S RNA is part of a ribonucleoprotein particle that has properties related to signal recognition particle. Cell. 1990 Nov 2;63(3):591–600. doi: 10.1016/0092-8674(90)90454-m. [DOI] [PubMed] [Google Scholar]
  27. Römisch K., Webb J., Herz J., Prehn S., Frank R., Vingron M., Dobberstein B. Homology of 54K protein of signal-recognition particle, docking protein and two E. coli proteins with putative GTP-binding domains. Nature. 1989 Aug 10;340(6233):478–482. doi: 10.1038/340478a0. [DOI] [PubMed] [Google Scholar]
  28. Siegel V., Walter P. Functional dissection of the signal recognition particle. Trends Biochem Sci. 1988 Aug;13(8):314–316. doi: 10.1016/0968-0004(88)90127-2. [DOI] [PubMed] [Google Scholar]
  29. Struck J. C., Lempicki R. A., Toschka H. Y., Erdmann V. A., Fournier M. J. Escherichia coli 4.5S RNA gene function can be complemented by heterologous bacterial RNA genes. J Bacteriol. 1990 Mar;172(3):1284–1288. doi: 10.1128/jb.172.3.1284-1288.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
  30. Wickner W., Driessen A. J., Hartl F. U. The enzymology of protein translocation across the Escherichia coli plasma membrane. Annu Rev Biochem. 1991;60:101–124. doi: 10.1146/annurev.bi.60.070191.000533. [DOI] [PubMed] [Google Scholar]
  31. Zwieb C. Structure and function of signal recognition particle RNA. Prog Nucleic Acid Res Mol Biol. 1989;37:207–234. doi: 10.1016/s0079-6603(08)60699-6. [DOI] [PubMed] [Google Scholar]

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