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. 2003 Oct;165(2):667–673. doi: 10.1093/genetics/165.2.667

Testing for asymmetrical gene flow in a Drosophila melanogaster body-size cline.

W Jason Kennington 1, Julia Gockel 1, Linda Partridge 1
PMCID: PMC1462776  PMID: 14573478

Abstract

Asymmetrical gene flow is an important, but rarely examined genetic parameter. Here, we develop a new method for detecting departures from symmetrical migration between two populations using microsatellite data that are based on the difference in the proportion of private alleles. Application of this approach to data collected from wild-caught Drosophila melanogaster along a latitudinal body-size cline in eastern Australia revealed that asymmetrical gene flow could be detected, but was uncommon, nonlocalized, and occurred in both directions. We also show that, in contrast to the findings of a previous study, there is good evidence to suggest that the cline experiences significant levels of gene flow between populations.

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Selected References

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  1. Agis M., Schlötterer C. Microsatellite variation in natural Drosophila melanogaster populations from New South Wales (Australia) and Tasmania. Mol Ecol. 2001 May;10(5):1197–1205. doi: 10.1046/j.1365-294x.2001.01271.x. [DOI] [PubMed] [Google Scholar]
  2. Anderson P. R., Knibb W. R., Oakeshott J. G. Observations on the extent and temporal stability of latitudinal clines for alcohol dehydrogenase allozymes and four chromosome inversions in Drosophila melanogaster. Genetica. 1987 Nov 30;75(2):81–88. doi: 10.1007/BF00055251. [DOI] [PubMed] [Google Scholar]
  3. Beerli P., Felsenstein J. Maximum likelihood estimation of a migration matrix and effective population sizes in n subpopulations by using a coalescent approach. Proc Natl Acad Sci U S A. 2001 Apr 3;98(8):4563–4568. doi: 10.1073/pnas.081068098. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Beerli P., Felsenstein J. Maximum-likelihood estimation of migration rates and effective population numbers in two populations using a coalescent approach. Genetics. 1999 Jun;152(2):763–773. doi: 10.1093/genetics/152.2.763. [DOI] [PMC free article] [PubMed] [Google Scholar]
  5. Berry A., Kreitman M. Molecular analysis of an allozyme cline: alcohol dehydrogenase in Drosophila melanogaster on the east coast of North America. Genetics. 1993 Jul;134(3):869–893. doi: 10.1093/genetics/134.3.869. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. Bertorelle G., Barbujani G. Analysis of DNA diversity by spatial autocorrelation. Genetics. 1995 Jun;140(2):811–819. doi: 10.1093/genetics/140.2.811. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Chikhi L., Destro-Bisol G., Bertorelle G., Pascali V., Barbujani G. Clines of nuclear DNA markers suggest a largely neolithic ancestry of the European gene pool. Proc Natl Acad Sci U S A. 1998 Jul 21;95(15):9053–9058. doi: 10.1073/pnas.95.15.9053. [DOI] [PMC free article] [PubMed] [Google Scholar]
  8. David J. R., Capy P. Genetic variation of Drosophila melanogaster natural populations. Trends Genet. 1988 Apr;4(4):106–111. doi: 10.1016/0168-9525(88)90098-4. [DOI] [PubMed] [Google Scholar]
  9. Gockel J., Kennington W. J., Hoffmann A., Goldstein D. B., Partridge L. Nonclinality of molecular variation implicates selection in maintaining a morphological cline of Drosophila melanogaster. Genetics. 2001 May;158(1):319–323. doi: 10.1093/genetics/158.1.319. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Gockel J., Robinson S. J. W., Kennington W. J., Goldstein D. B., Partridge L. Quantitative genetic analysis of natural variation in body size in Drosophila melanogaster. Heredity (Edinb) 2002 Aug;89(2):145–153. doi: 10.1038/sj.hdy.6800121. [DOI] [PubMed] [Google Scholar]
  11. James A. C., Azevedo R. B., Partridge L. Cellular basis and developmental timing in a size cline of Drosophila melanogaster. Genetics. 1995 Jun;140(2):659–666. doi: 10.1093/genetics/140.2.659. [DOI] [PMC free article] [PubMed] [Google Scholar]
  12. Kimmel M., Chakraborty R., Stivers D. N., Deka R. Dynamics of repeat polymorphisms under a forward-backward mutation model: within- and between-population variability at microsatellite loci. Genetics. 1996 May;143(1):549–555. doi: 10.1093/genetics/143.1.549. [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. Kirkpatrick M., Barton N. H. Evolution of a species' range. Am Nat. 1997 Jul;150(1):1–23. doi: 10.1086/286054. [DOI] [PubMed] [Google Scholar]
  14. Knibb W. R., Oakeshott J. G., Gibson J. B. Chromosome Inversion Polymorphisms in DROSOPHILA MELANOGASTER. I. Latitudinal Clines and Associations between Inversions in Australasian Populations. Genetics. 1981 Aug;98(4):833–847. doi: 10.1093/genetics/98.4.833. [DOI] [PMC free article] [PubMed] [Google Scholar]
  15. Singh R. S., Rhomberg L. R. A Comprehensive Study of Genic Variation in Natural Populations of Drosophila melanogaster. I. Estimates of Gene Flow from Rare Alleles. Genetics. 1987 Feb;115(2):313–322. doi: 10.1093/genetics/115.2.313. [DOI] [PMC free article] [PubMed] [Google Scholar]
  16. Slatkin M. A measure of population subdivision based on microsatellite allele frequencies. Genetics. 1995 Jan;139(1):457–462. doi: 10.1093/genetics/139.1.457. [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. Zheng Xiaoguang, Arbogast Brian S., Kenagy G. J. Historical demography and genetic structure of sister species: deermice (Peromyscus) in the North American temperate rain forest. Mol Ecol. 2003 Mar;12(3):711–724. doi: 10.1046/j.1365-294x.2003.01770.x. [DOI] [PubMed] [Google Scholar]
  18. Zwaan B. J., Azevedo R. B., James A. C., Van 't Land J., Partridge L. Cellular basis of wing size variation in Drosophila melanogaster: a comparison of latitudinal clines on two continents. Heredity (Edinb) 2000 Mar;84(Pt 3):338–347. doi: 10.1046/j.1365-2540.2000.00677.x. [DOI] [PubMed] [Google Scholar]

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