Skip to main content
Nucleic Acids Research logoLink to Nucleic Acids Research
. 1997 Jan 1;25(1):31–36. doi: 10.1093/nar/25.1.31

The SWISS-PROT protein sequence data bank and its supplement TrEMBL.

A Bairoch 1, R Apweiler 1
PMCID: PMC146382  PMID: 9016499

Abstract

SWISS-PROT is a curated protein sequence database which strives to provide a high level of annotations (such as the description of the function of a protein, structure of its domains, post-translational modifications, variants, etc.), a minimal level of redundancy and high level of integration with other databases. Recent developments of the database include: an increase in the number and scope of model organisms; cross-references to two additional databases; a variety of new documentation files and the creation of TrEMBL, a computer annotated supplement to SWISS-PROT. This supplement consists of entries in SWISS-PROT-like format derived from the translation of all coding sequences (CDS) in the EMBL nucleotide sequence database, except the CDS already included in SWISS-PROT.

Full Text

The Full Text of this article is available as a PDF (143.1 KB).

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Appel R. D., Bairoch A., Hochstrasser D. F. A new generation of information retrieval tools for biologists: the example of the ExPASy WWW server. Trends Biochem Sci. 1994 Jun;19(6):258–260. doi: 10.1016/0968-0004(94)90153-8. [DOI] [PubMed] [Google Scholar]
  2. Bairoch A., Apweiler R. The SWISS-PROT protein sequence data bank and its new supplement TREMBL. Nucleic Acids Res. 1996 Jan 1;24(1):21–25. doi: 10.1093/nar/24.1.21. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. Bairoch A., Bucher P., Hofmann K. The PROSITE database, its status in 1995. Nucleic Acids Res. 1996 Jan 1;24(1):189–196. doi: 10.1093/nar/24.1.189. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Bairoch A. The ENZYME data bank in 1995. Nucleic Acids Res. 1996 Jan 1;24(1):221–222. doi: 10.1093/nar/24.1.221. [DOI] [PMC free article] [PubMed] [Google Scholar]
  5. Corbett J. M., Wheeler C. H., Baker C. S., Yacoub M. H., Dunn M. J. The human myocardial two-dimensional gel protein database: update 1994. Electrophoresis. 1994 Nov;15(11):1459–1465. doi: 10.1002/elps.11501501209. [DOI] [PubMed] [Google Scholar]
  6. Rodriguez-Tomé P., Stoehr P. J., Cameron G. N., Flores T. P. The European Bioinformatics Institute (EBI) databases. Nucleic Acids Res. 1996 Jan 1;24(1):6–12. doi: 10.1093/nar/24.1.6. [DOI] [PMC free article] [PubMed] [Google Scholar]

Articles from Nucleic Acids Research are provided here courtesy of Oxford University Press

RESOURCES