Abstract
We have mutagenized a clinical strain of Salmonella enterica sv. typhi with mini-transposon Tn10dTet (T-POP) to obtain conditional lethal (tetracycline-dependent) mutants with T-POP insertions upstream of essential genes. Generalized transducing phage P22 was used to introduce T-POP from a S. typhimurium donor into a S. typhi recipient. Chromosomal DNA was purified from the mutagenized donor strains, fragmented, and then electroporated into S. typhi to backcross the original T-POP insertions. Four tetracycline-dependent mutants with two distinct terminal phenotypes were found among 1700 mutants with T-POP insertions. When grown in the absence of tetracycline, two of the four tetracycline-dependent mutants arrest at a late stage in the cell cycle, can be rescued by outgrowth in media with tetracycline, and define a reversible checkpoint late in the cell cycle. One of these insertions creates an operon fusion with a gene, yqgF, that is conserved among gram-negative bacteria and likely encodes an essential Holliday junction resolvase. T-POP insertions can be used not only to identify essential S. typhi genes but also to reveal novel phenotypes resulting from the depletion of their products.
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- Altekruse S. F., Cohen M. L., Swerdlow D. L. Emerging foodborne diseases. Emerg Infect Dis. 1997 Jul-Sep;3(3):285–293. doi: 10.3201/eid0303.970304. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Aravind L., Makarova K. S., Koonin E. V. SURVEY AND SUMMARY: holliday junction resolvases and related nucleases: identification of new families, phyletic distribution and evolutionary trajectories. Nucleic Acids Res. 2000 Sep 15;28(18):3417–3432. doi: 10.1093/nar/28.18.3417. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Bearson B. L., Wilson L., Foster J. W. A low pH-inducible, PhoPQ-dependent acid tolerance response protects Salmonella typhimurium against inorganic acid stress. J Bacteriol. 1998 May;180(9):2409–2417. doi: 10.1128/jb.180.9.2409-2417.1998. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Botello E., Nordström K. Effects of chromosome underreplication on cell division in Escherichia coli. J Bacteriol. 1998 Dec;180(23):6364–6374. doi: 10.1128/jb.180.23.6364-6374.1998. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Boyle D. S., Khattar M. M., Addinall S. G., Lutkenhaus J., Donachie W. D. ftsW is an essential cell-division gene in Escherichia coli. Mol Microbiol. 1997 Jun;24(6):1263–1273. doi: 10.1046/j.1365-2958.1997.4091773.x. [DOI] [PubMed] [Google Scholar]
- Britton R. A., Powell B. S., Dasgupta S., Sun Q., Margolin W., Lupski J. R., Court D. L. Cell cycle arrest in Era GTPase mutants: a potential growth rate-regulated checkpoint in Escherichia coli. Mol Microbiol. 1998 Feb;27(4):739–750. doi: 10.1046/j.1365-2958.1998.00719.x. [DOI] [PubMed] [Google Scholar]
- Contreras I., Toro C. S., Troncoso G., Mora G. C. Salmonella typhi mutants defective in anaerobic respiration are impaired in their ability to replicate within epithelial cells. Microbiology. 1997 Aug;143(Pt 8):2665–2672. doi: 10.1099/00221287-143-8-2665. [DOI] [PubMed] [Google Scholar]
- Dassain M., Leroy A., Colosetti L., Carolé S., Bouché J. P. A new essential gene of the 'minimal genome' affecting cell division. Biochimie. 1999 Aug-Sep;81(8-9):889–895. doi: 10.1016/s0300-9084(99)00207-2. [DOI] [PubMed] [Google Scholar]
- Edwards M. F., Stocker B. A. Construction of delta aroA his delta pur strains of Salmonella typhi. J Bacteriol. 1988 Sep;170(9):3991–3995. doi: 10.1128/jb.170.9.3991-3995.1988. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hanahan D. Studies on transformation of Escherichia coli with plasmids. J Mol Biol. 1983 Jun 5;166(4):557–580. doi: 10.1016/s0022-2836(83)80284-8. [DOI] [PubMed] [Google Scholar]
- Hara H., Yasuda S., Horiuchi K., Park J. T. A promoter for the first nine genes of the Escherichia coli mra cluster of cell division and cell envelope biosynthesis genes, including ftsI and ftsW. J Bacteriol. 1997 Sep;179(18):5802–5811. doi: 10.1128/jb.179.18.5802-5811.1997. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Judson N., Mekalanos J. J. TnAraOut, a transposon-based approach to identify and characterize essential bacterial genes. Nat Biotechnol. 2000 Jul;18(7):740–745. doi: 10.1038/77305. [DOI] [PubMed] [Google Scholar]
- Kutsukake K., Ohya Y., Iino T. Transcriptional analysis of the flagellar regulon of Salmonella typhimurium. J Bacteriol. 1990 Feb;172(2):741–747. doi: 10.1128/jb.172.2.741-747.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Lam H. M., Winkler M. E. Characterization of the complex pdxH-tyrS operon of Escherichia coli K-12 and pleiotropic phenotypes caused by pdxH insertion mutations. J Bacteriol. 1992 Oct;174(19):6033–6045. doi: 10.1128/jb.174.19.6033-6045.1992. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Lissner C. R., Swanson R. N., O'Brien A. D. Genetic control of the innate resistance of mice to Salmonella typhimurium: expression of the Ity gene in peritoneal and splenic macrophages isolated in vitro. J Immunol. 1983 Dec;131(6):3006–3013. [PubMed] [Google Scholar]
- Liu S. L., Ezaki T., Miura H., Matsui K., Yabuuchi E. Intact motility as a Salmonella typhi invasion-related factor. Infect Immun. 1988 Aug;56(8):1967–1973. doi: 10.1128/iai.56.8.1967-1973.1988. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Martinez E., Bartolomé B., de la Cruz F. pACYC184-derived cloning vectors containing the multiple cloning site and lacZ alpha reporter gene of pUC8/9 and pUC18/19 plasmids. Gene. 1988 Aug 15;68(1):159–162. doi: 10.1016/0378-1119(88)90608-7. [DOI] [PubMed] [Google Scholar]
- Mittenhuber G. Comparative genomics of prokaryotic GTP-binding proteins (the Era, Obg, EngA, ThdF (TrmE), YchF and YihA families) and their relationship to eukaryotic GTP-binding proteins (the DRG, ARF, RAB, RAN, RAS and RHO families). J Mol Microbiol Biotechnol. 2001 Jan;3(1):21–35. [PubMed] [Google Scholar]
- Nishiyama K., Hanada M., Tokuda H. Disruption of the gene encoding p12 (SecG) reveals the direct involvement and important function of SecG in the protein translocation of Escherichia coli at low temperature. EMBO J. 1994 Jul 15;13(14):3272–3277. doi: 10.1002/j.1460-2075.1994.tb06628.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Opperman T., Murli S., Smith B. T., Walker G. C. A model for a umuDC-dependent prokaryotic DNA damage checkpoint. Proc Natl Acad Sci U S A. 1999 Aug 3;96(16):9218–9223. doi: 10.1073/pnas.96.16.9218. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Pang T., Levine M. M., Ivanoff B., Wain J., Finlay B. B. Typhoid fever--important issues still remain. Trends Microbiol. 1998 Apr;6(4):131–133. doi: 10.1016/s0966-842x(98)01236-0. [DOI] [PubMed] [Google Scholar]
- Parkhill J., Dougan G., James K. D., Thomson N. R., Pickard D., Wain J., Churcher C., Mungall K. L., Bentley S. D., Holden M. T. Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18. Nature. 2001 Oct 25;413(6858):848–852. doi: 10.1038/35101607. [DOI] [PubMed] [Google Scholar]
- Patterson B., Guthrie C. An essential yeast snRNA with a U5-like domain is required for splicing in vivo. Cell. 1987 Jun 5;49(5):613–624. doi: 10.1016/0092-8674(87)90537-x. [DOI] [PubMed] [Google Scholar]
- Rappleye C. A., Roth J. R. A Tn10 derivative (T-POP) for isolation of insertions with conditional (tetracycline-dependent) phenotypes. J Bacteriol. 1997 Sep;179(18):5827–5834. doi: 10.1128/jb.179.18.5827-5834.1997. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Santiviago Carlos A., Fuentes Juan A., Bueno Susan M., Trombert A. Nicole, Hildago Alejandro A., Socias L. Teresa, Youderian Philip, Mora Guido C. The Salmonella enterica sv. Typhimurium smvA, yddG and ompD (porin) genes are required for the efficient efflux of methyl viologen. Mol Microbiol. 2002 Nov;46(3):687–698. doi: 10.1046/j.1365-2958.2002.03204.x. [DOI] [PubMed] [Google Scholar]
- Sutton M. D., Walker G. C. Managing DNA polymerases: coordinating DNA replication, DNA repair, and DNA recombination. Proc Natl Acad Sci U S A. 2001 Jul 17;98(15):8342–8349. doi: 10.1073/pnas.111036998. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Toro C. S., Mora G. C., Figueroa-Bossi N. Gene transfer between related bacteria by electrotransformation: mapping Salmonella typhi genes in Salmonella typhimurium. J Bacteriol. 1998 Sep;180(17):4750–4752. doi: 10.1128/jb.180.17.4750-4752.1998. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Van Asten F. J., Hendriks H. G., Koninkx J. F., Van der Zeijst B. A., Gaastra W. Inactivation of the flagellin gene of Salmonella enterica serotype enteritidis strongly reduces invasion into differentiated Caco-2 cells. FEMS Microbiol Lett. 2000 Apr 15;185(2):175–179. doi: 10.1111/j.1574-6968.2000.tb09058.x. [DOI] [PubMed] [Google Scholar]
- Way J. C., Davis M. A., Morisato D., Roberts D. E., Kleckner N. New Tn10 derivatives for transposon mutagenesis and for construction of lacZ operon fusions by transposition. Gene. 1984 Dec;32(3):369–379. doi: 10.1016/0378-1119(84)90012-x. [DOI] [PubMed] [Google Scholar]