Abstract
Phosphatidylinositol transfer proteins (PITPs) regulate the interface between lipid metabolism and specific steps in membrane trafficking through the secretory pathway in eukaryotes. Herein, we describe the cis-acting information that controls PITPβ localization in mammalian cells. We demonstrate PITPβ localizes predominantly to the trans-Golgi network (TGN) and that this localization is independent of the phospholipid-bound state of PITPβ. Domain mapping analyses show the targeting information within PITPβ consists of three short C-terminal specificity elements and a nonspecific membrane-binding element defined by a small motif consisting of adjacent tryptophan residues (the W202W203 motif). Combination of the specificity elements with the W202W203 motif is necessary and sufficient to generate an efficient TGN-targeting module. Finally, we demonstrate that PITPβ association with the TGN is tolerant to a range of missense mutations at residue serine 262, we describe the TGN localization of a novel PITPβ isoform with a naturally occurring S262Q polymorphism, and we find no other genetic or pharmacological evidence to support the concept that PITPβ localization to the TGN is obligately regulated by conventional protein kinase C (PKC) or the Golgi-localized PKC isoforms δ or ε. These latter findings are at odds with a previous report that conventional PKC-mediated phosphorylation of residue Ser262 is required for PITPβ targeting to Golgi membranes.
INTRODUCTION
Because the discovery that a phosphatidylinositol transfer protein (PITP) plays an essential role in regulating the interface between lipid metabolism and membrane trafficking from the yeast trans-Golgi network (TGN; Bankaitis et al., 1990; Cleves et al., 1991a, 1991b), it has become increasingly clear that lipid metabolism regulates many individual trafficking steps throughout the secretory pathway (Cleves et al., 1991a; DeCamilli et al., 1996; Simonsen et al., 2001). In vivo studies demonstrate PITPs either control the efficiency at which trafficking reactions occur (Bankaitis et al., 1989, 1990; Cleves et al., 1991b; Kearns et al., 1997) or impart spatial organization to these reactions (Carmen-Lopez et al., 1994; Nakase et al., 2001; Vincent et al., 2005). PITPs do so by coupling their ability to bind and/or transfer specific lipids to the coordination of lipid metabolic pathways with specific membrane trafficking steps (see Phillips et al., 2006). In vitro reconstitution of various membrane trafficking or receptor-coupled signaling reactions also identify involvements for PITPs in these events (Hay and Martin, 1993; Ohashi et al., 1995; Cunningham et al., 1996; Jones et al., 1998).
The available evidence indicates confident assignment of function for any individual PITP requires in vivo studies with model genetic systems. The reconstituted systems that show PITP dependence are remarkably promiscuous from the perspective of source of PITP. This is amply demonstrated by the stoichiometric interchangeability of yeast and mammalian PITPs in such reconstitutions (Ohashi et al., 1995; Cunningham et al., 1996; Jones et al., 1998), even though these PITPs exhibit unrelated structural folds (Sha et al., 1998; Yoder et al., 2001; Tilley et al., 2004). By contrast, in vivo studies show even very closely related PITPs play nonredundant functions in cells (Li et al., 2000; Alb et al., 2002, 2003; Routt and Bankaitis, 2004; Vincent et al., 2005).
Mammalian cells express three soluble PITPs. PITPα and PITPβ share 77 and 95% primary sequence identity and similarity, respectively, and are encoded by distinct genes. The third, rdgBβ, is considerably more diverged and remains largely unstudied (Fullwood et al., 1999). The shared homologies notwithstanding, PITPα and PITPβ are functionally distinct (Alb et al., 2002, 2003). In this regard, PITPα binds PtdIns and PtdCho, whereas PITPβ binds both those phospholipids and, in addition, sphingomyelin (SM; De Vries et al., 1995). Moreover, recombinant PITPα and PITPβ localize to distinct compartments, the former to the cytosol and nucleus and the latter to the cytosol and a perinuclear compartment that is likely the Golgi complex (De Vries et al., 1995, 1996; van Tiel et al., 2002). The relationship between the distinct biochemical properties of these two PITP isoforms and localization and function (if any) remain to be determined.
Herein, we report that endogenous PITPβ (and a novel spliceoform thereof) localizes predominantly to TGN membranes and that localization is specified by a functionally redundant set of three short C-terminal motifs. These motifs are collectively insufficient to target a naive reporter to Golgi membranes, but cooperate with a W202W203 motif to generate an efficient TGN-targeting module. We also show that the phospholipid-bound status of PITPβ does not contribute to its association with the TGN. Finally, in contrast to a previous claim (van Tiel et al., 2002), our data indicate that neither localization of PITPβ nor its novel spliceoform to Golgi membranes is obligately regulated by conventional protein kinase C (PKC)-mediated phosphorylation of residue serine 262.
MATERIALS AND METHODS
Mammalian Cell Culture and Transfections
Murine embryonic fibroblasts (MEFs) were derived from E16.5 wild-type and PITPα−/− embryos as previously described (Alb et al., 2003). The mammalian cell lines used in this study were cultured in DMEM containing 10% fetal bovine serum, 1 U/ml penicillin G, 100 μg/ml streptomycin, and 4.2 μl β-mercaptoethanol (for 500 ml of complete medium). Cultures were incubated at 37°C and in 5% CO2.
COS-7 cells were transfected using Lipofectamine Plus reagent (Invitrogen, Carlsbad, CA). Briefly, 24 h before transfection the cells were plated at 50–60% confluency in six-well plates containing glass coverslips. DNA (1.5–2 μg) was reconstituted in 100 μl of OptiMEM (Invitrogen), mixed with 2 μl of Plus reagent, and incubated at room temperature for 15 min. In a separate microcentrifuge tube, 3 μl of Lipofectamine was diluted in 100 μl of OptiMEM for each transfection. After 15 min, the solutions were mixed and then incubated for 15 min at 25°C. Cells were washed twice with OptiMEM and incubated at 37°C with DNA mixture in 1 ml OptiMEM for 3 h. Subsequently, 4 ml of complete medium was added, and cells were cultured for 18–24 h before processing for immunocytochemistry. MEFs were transfected using the Amaxa (Cologne, Germany) nucleofector following the manufacturer's directions.
Antibody Reagents
PITP antibodies used in this study included: a PITPβ isoform–specific rabbit polyclonal antibody directed against the C-terminal 25 amino acid of PITPβ (generous gift from Bruce Hamilton), a PITPα isoform–specific chicken polyclonal antibody directed against the last 15 amino acids of PITPα (Alb et al., 2002), and the NT-PITP-antibody rabbit polyclonal immunoglobulin (Ig) raised against the N-terminus of PITPα and that recognizes both PITPα and PITPβ (generous gift of Prof. George Helmkamp, Jr.).
The following primary antibodies were used: a monoclonal antibody directed against actin (Chemicon, Temecula, CA), sheep polyclonal anti-TGN38 Ig (Serotec), monoclonal anti-GM130 antibodies (BD Bioscience, San Diego, CA), and murine monoclonal anti-giantin Ig (generous gift from Dr. Hans Peter Hauri, Switzerland). Secondary antibodies used included: Alexa fluorescein isothiocyanate 488 (Molecular Probes, Eugene, OR), Cy5-conjugated anti-mouse and fluorescein isothiocyanate–conjugated anti-mouse (Jackson ImmunoResearch, West Grove, PA), and goat anti-rabbit, goat anti-mouse, or goat anti-chicken horseradish peroxidase (HRP)-conjugated antibodies (Jackson ImmunoResearch).
Immunocytochemistry
Cells were cultured on glass coverslips. Cells were fixed for 15 min with 3.7% formaldehyde in phosphate-buffered saline (PBS), permeabilized in 0.2% Triton X-100 in PBS for 4 min, rinsed once in PBS, and then preincubated for 30 min in blocking buffer (2% BSA in PBS). Permeabilized cells were subsequently incubated with suitable primary antibody appropriately diluted in blocking buffer for 1 h at room temperature, rinsed four times 5 min with PBS, and then incubated with the secondary antibodies appropriately diluted in blocking buffer for 1 h. Cells were rinsed four times in PBS, and coverslips were mounted onto glass slides and examined in a Leica SP2 Laser Scanning Confocal Microscope (Leica, Deerfield, IL). Images were processed with the use of Adobe Photoshop 6.0 (Adobe Systems, Mountain View, CA).
In classifying PITP localization profiles as “‘Golgi,” two major criteria were applied. First, for to score a profile as Golgi the appropriate query profile (GFP or PITP) must exhibit obvious and predominant colocalization with a Golgi marker (TGN38 or GM130). Second, the Golgi component of the query profile must be the strongest signal recorded in the cell being scored. Failure to satisfy both these criteria resulted in a non-Golgi score. Fixed and stained samples were blinded before scoring to control for investigator bias.
Pharmacological Challenge
PITPα−/− MEFs were grown on glass coverslips to subconfluency and intoxicated with chelerethryne chloride (0.66 μM; Sigma, St. Louis, MO) or G109203X (10 nM; Sigma) for appropriate times. PKC activity in MEFs was also stimulated by exposure of cells grown on coverslips to PMA (100 nM, Sigma) for 15 min in serum-free medium. Cells were subsequently fixed for PITPβ immunostaining as described above. Cell-free extracts were prepared for parallel-treated cultures and processed for immunoblot analysis as described below.
SDS-PAGE and Immunoblotting
Cultures were rinsed with ice-cold PBS and scraped into lysis buffer (20 mM Tris-HCL, pH 7.4, 150 mM NaCl, 2 mM EDTA, 10 mM NaF, 1% Triton 1 mM orthovanadate supplemented with a cocktail of protease inhibitors (Complete; Roche, Indianapolis, IN). For preparation of cell-free extracts, cells (grown to confluency in a 100-mm dish) were incubated with 700 μl of lysis buffer at 4°C for 10 min and then scraped with a rubber policeman into microcentrifuge tubes. After centrifugation at 14,000 × g for 10 min, the supernatant was mixed in Laemmli sample buffer and heated for 5 min at 95°C. Samples were resolved by SDS-PAGE (10%) and transferred to nitrocellulose (Millipore, Billerica, MA). Membranes were blocked overnight at 4°C in TBST (5% dry nonfat milk in 0.05% Tween 20 in Tris-buffered saline) and then incubated for 3 h at room temperature with the appropriate primary antibodies diluted in TBST. Membranes were rinsed four times for 5 min each with TBST and then incubated with the appropriate HRP-conjugated secondary antibody for 1 h, and washed four times for 5 min each with TBST. Blots were developed on x-ray film (Eastman Kodak, Rochester, NY) using the enhanced chemiluminescence (ECL) Western blotting detection reagent (Amersham, Arlington Heights, IL).
Generation of PITPα-GFP and PITPβ-GFP cDNAs
PCR primers for rat-PITPα and rat-PITPβ cDNA sequences were flanked on the 5′ end with the restriction enzyme site HindIII and on the 3′ end with the restriction enzyme site BamHI. The HindIII-BamHI PCR fragments were cloned into the pEGFP-C1 plasmid (Clontech, Palo Alto, CA). Yeast plasmids harboring PITPα and PITPβ cDNAs (Skinner et al., 1993) were used as templates in the PCR reactions used for generating the appropriate DNA fragments for cloning. The resulting plasmids were designated pRE772 (PITPβ-GFP) and pRE774 (PITPα-GFP). Primer sequences used are available from the authors by request.
Yeast Complementation Assay
Wild-type and mutant PITPβ or PITPβ-GFP cDNAs, as appropriate, were cloned into the multicopy yeast URA3 vector YEplac195 such that the cDNA was expressed either under control of the powerful constitutive PGK promoter or the constitutively expressed but weaker SEC14 promoter. This expression vector was transformed into the sec14-1ts yeast strain (CTY 1-1A, MATa ura3-52 his3Δ200, lys2-810 sec14-1ts; Cleves et al., 1991b) using the lithium acetate method of Ito et al. (1983). As matched controls, isogenic vectors with either no insert or with SEC14 or PITPβ cDNA inserts were also transformed into the sec14-1ts yeast host strain. Transformants were selected and cultured in uracil-free glucose minimal medium (Sherman et al., 1983). Five OD600 equivalents of each strain were resuspended in 200 μl Tris-EDTA buffer and serially diluted 10-fold in Tris-EDTA buffer. An aliquot (5 μl) of each dilution was spotted on duplicate YPD agar plates. One plate was incubated at the 30°C (a permissive temperature for sec14-1ts mutants) to report unrestrained growth and viability. The companion plate was incubated at 37°C (normally a restrictive temperature for sec14-1ts mutants) to assess phenotypic rescue of sec14-1ts.
Phospholipid-Transfer Assays
Assays were performed using cytosol prepared from the sec14Δ cki1 host strain CTY303 expressing the desired PITP as described previously (Kearns et al., 1998; Phillips et al., 1999; Li et al., 2000; Vincent et al., 2005). Cytosol fractions generated from CTY303 variants expressing Sec14p (positive control) or no PITP (negative control) were generated and assayed in parallel with those fractions containing PITPα, PITPβ, or PITPβ variants.
Site-directed Mutagenesis
The QuickChange kit (Stratagene, La Jolla, CA) was used. Sequences of the various mutagenic primers used are available from the authors by request. All mutant versions generated were verified by nucleotide sequence analysis.
RESULTS
Endogenous PITPβ Localizes to the Mammalian Golgi Complex
Previous experiments suggesting a Golgi localization of PITPβ in mammalian cells relied on microinjection of purified fluorophore-modified protein into cells (De Vries et al., 1996) or creation of stable cell lines that overexpress PITPβ (van Tiel et al., 2002). As a result, several key questions regarding PITPβ localization remain. First, it remains to be demonstrated whether endogenous PITPβ is genuinely a Golgi membrane–associated protein. Second, the precise distribution of PITPβ within the Golgi stack also remains to be determined.
Specific localization of endogenous PITPβ was complicated by our observation that antibodies generated against the extreme C-terminal 15- and 25-residue peptides of these proteins, although facile for distinguishing PITPα from PITPβ by immunoblotting, are not satisfactory for immunofluorescence experiments (unpublished data). To circumvent this issue, we used polyclonal antibodies raised against amino-terminal sequences conserved between PITPα and PITPβ. These antibodies (NT-PITP-antibody) are suitable for immunofluorescence but are not specific reagents in that these recognize both PITPα and PITPβ isoforms in immunoblotting experiments. The specificity issue notwithstanding, we inspected the endogenous PITP immunofluorescence staining profiles obtained with NT-PITP-antibody in an array of cell lines. Swiss 3T3 fibroblasts exhibited a strong perinuclear staining of what appears to be the Golgi apparatus and a diffuse signal in the cytoplasm and the nuclear matrix (Figure 1A). The PITP profiles obtained with Swiss 3T3 cells and NT-PITP-antibody as reporter were typical. Very similar results were also obtained with a variety of other cell lines including astrocytes, primary neurons, and COS-7, HeLa, and HEK293 cells. That the perinuclear PITP staining identifies the Golgi complex is indicated by the coincidence of this profile with that obtained for the cis-Golgi marker GM130 (Figure 1A). As the NT-PITP-antibody immunofluorescence profiles collected with immortalized cell lines represent the sum of endogenous PITPβ and PITPα distribution, and previous studies indicate PITPα localizes to the cytoplasm and nuclear matrix (De Vries et al., 1996), these various localization profiles suggest that endogenous PITPβ targets to Golgi membranes in a variety of cell types.
To visualize endogenous PITPβ in isolation from PITPα, we used NT-PITP-antibody as PITP detector and took advantage of PITPα nullizygous primary cell lines that we had previously generated. The nullizygous MEFs are well suited for these experiments as these cells are phenotypically indistinguishable from wild-type MEFs and retain unadulterated levels of endogenous PITPβ (Alb et al., 2002, 2003). As shown in Figure 1B, NT-PITP-antibody decorates an elaborate ribbonlike perinuclear structure in these PITPα−/− MEFs, and this structure is also stained by the cis-Golgi marker GM130. The GM130 and presumptive PITPβ staining profiles are very similar in form, but are not coincident. These data indicate that PITPβ does not localize to cis-Golgi membranes but, rather, localizes to a distinct subcompartment of the Golgi complex (see below). Very little staining of the cytoplasm or nucleus is observed, and staining of the lacelike ER is also evident. These staining profiles were absent when naive preimmune serum was substituted for NT-PITP-antibody in these experiments.
To confirm localization of the known PITPβ, we constructed a PITPβ-GFP chimera, where GFP was fused to the C-terminus of PITPβ. The activity of the PITPβ-GFP chimera was established with a yeast phenotypic rescue assay. This assay capitalizes on previous demonstrations that high-level expression of mammalian PITPs in yeast rescues the growth and secretory defects associated with inactivation of the essential yeast PITP Sec14p (Skinner et al., 1993; Tanaka and Hosaka, 1994). This rescue is dependent on robust PtdIns-binding/transfer by the heterologous mammalian PITP (Alb et al., 1995). As shown in Figure 1C, a sec14-1ts yeast strain carrying an ectopic copy of the wild-type SEC14 gene grows robustly at 37°C. By contrast, the isogenic sec14-1ts strain fails to grow at all at 37°C, i.e., the restrictive temperature at which the thermolabile sec14-1ts gene product is inactive. Expression of PITPβ-GFP restored robust growth to the sec14-1ts yeast mutant at the restrictive 37°C temperature.
The functional PITPβ-GFP was expressed in MEFs and the distribution of the chimera was monitored. These localization experiments confirm an unambiguous affinity of PITPβ-GFP for Golgi membranes in MEFs (Figure 1D) and also in COS-7 cells (see below).
PITPβ Selectively Associates with the TGN
Although both Golgi and ER membranes harbor pools of PITPβ, Golgi localization predominates and how PITPβ targets to the Golgi membrane system is the focus of this study. To more precisely assign the Golgi subcompartment of residence for endogenous PITPβ, we performed a series of double-label immunofluorescence experiments. In these experiments, NT-PITP-antibody was used in combination with compatible antibodies raised against markers for specific Golgi compartments. These markers included GM130 for cis-Golgi, giantin for cis- and medial-Golgi, and TGN38 for the TGN. PITPα nullizygous MEFs were used to ensure specific detection of endogenous forms of PITPβ.
As shown in Figures 2, A and B, endogenous PITPβ exhibits little coincidence of staining with the cis-Golgi marker GM130, or the medial-Golgi marker giantin, even though the general profiles for PITPβ and these markers are very similar. Endogenous PITPβ species exhibit a higher degree of colocalization with the trans-Golgi membrane marker TGN38, however (Figure 2C). The predominant localization of PITPβ to TGN membranes is emphasized in a stereo reconstruction of the MEF Golgi apparatus generated from triple-label experiments monitoring PITP, giantin, and TGN38 (Supplemental Video, Figure S1). The rotating image distinguishes giantin staining from the yellow staining that reports colocalization of TGN38 and PITPβ. We infer from these experiments that PITPβ targets predominantly to the trans-aspect of the Golgi stack in MEFs.
During the course of these studies, we noted the existence in the NCBI Protein Database of an uncharacterized PITPβ spliceoform (referred to as PITPβQGQR, as opposed to canonical spliceoform that we refer to as PITPβ) that is invisible to our PITPβ-specific antibodies in immunoblot experiments (murine form, accession number AAH34676; rat form, AAH61538; human form, AAH31427). This spliceoform is detected by the NT-PITP-antibody, however, and the PITPβ localization profiles described in Figure 2 represent the sum of the PITPβ and PITPβQGQR profiles (these two spliceoforms are both expressed in MEFs; unpublished data). Defined GFP-chimeras permit localization of each spliceoform in isolation, however. As further described below, we show that both PITPβ-GFP and PITPβQGQR-GFP reporters target efficiently to similar (albeit not identical) Golgi subcompartments.
PITPβ C-terminal Motifs Necessary for TGN Targeting
The distinctive localization profiles for PITPβ and PITPα are remarkable in light of the high degree of primary sequence identity shared by these PITPs. To map the determinants specifying targeting of PITPβ to the mammalian TGN in an unbiased manner, we constructed a reciprocal series of PITPβ/PITPα hybrid proteins in the context of a functional PITP-GFP chimera. The functional status of key chimeras was confirmed in the heterologous yeast sec14-1ts phenotypic rescue assay (Skinner et al., 1993; described above and in Figure 1C). All chimeras generated were active in the yeast phenotypic rescue assay and were expressed both in PITPα−/− MEFs and in COS-7 cells. The respective intracellular distributions were imaged and quantified for both cell types. In describing the results of the mapping experiments, we present data obtained with MEFs and report the COS-7 data in Supplemental Materials.
The C-terminal 28 PITPβ residues are both necessary for PITPβ targeting to Golgi membranes and are sufficient to efficiently redirect PITPα to that location (Figure 3A). The results were robust because the incidence of Golgi targeting in cells was >90% for PITPβ and the PITPα/β chimera and <5% for PITPα and the PITP β/α chimera. Representative images for each chimera are shown in Figure 3B. In the imaging experiments reported herein, we typically identify the Golgi region by surveying the cis-Golgi marker GM130 but confirmed that assignment by costaining with the pan-Golgi marker wheat germ agglutinin and, for key reporter/mutant constructs, by costaining for TGN38 (see below).
Alignment of the PITPβ and PITPα C-terminal primary sequences identifies three motifs of greatest divergence between these isoforms. We refer to these motifs as BOX1, BOX2, and BOX3 (Figure 3C). Mutagenesis experiments, where each individual BOX region from PITPα was substituted for the corresponding BOX region of PITPβ, demonstrated that PITPβKQE, PITPβQDPK, and PITPβMTD all exhibited efficiencies of Golgi localization similar to those recorded for the PITPβ control (Figure 3, C and D). Thus, no single BOX motif is essential for PITPβ targeting to Golgi membranes. We also observed that swap of any two of the BOX domains from PITPα into the PITPβ context did not compromise association of PITPβ with TGN membranes (Figure 3, C and D). These data indicate that the presence of any single PITPβ motif is sufficient for maintenance of PITPβ localization to the Golgi complex. Parallel analyses of the localization properties of each chimera were also conducted in COS-7 cells with essentially identical results (Supplemental Materials, Figure S2).
PITPβ C-terminal Motifs Sufficient for Targeting PITPα to Golgi Membranes
To address the dual criteria of necessity and sufficiency, we tested whether any BOX residues sufficient for PITPβ localization to the TGN were capable of redirecting PITPα to the same. To this end, PITPβ BOX1 or BOX3 residues were incorporated into the context of an otherwise wild-type PITPα. The localization profiles of both constructs (PITPαQET and PITPαTSA) fully recapitulated the nuclear and cytoplasmic distribution of the PITPα control (Figure 4A). Thus, neither BOX1 nor BOX3 has an assignable targeting function on its own in the context of PITPα. However, BOX2 residues, although dispensable for PITPβ targeting to the Golgi complex, increased the efficiency with which an otherwise wild-type PITPα reporter associates with Golgi membranes. That construct (PITPαKGSR) was scored as targeting to Golgi membranes in 51% of the transfected cells analyzed. Although this level of targeting is not as robust as that observed with the PITPβ positive control (>90%), it is substantial when compared with the basal association of the PITPα control with the Golgi complex (ca. 5%; Figure 4A).
When multiple PITPβ BOX motifs were swapped into the PITPα context, an essentially complete redirection of a PITPα reporter to the TGN was observed. Combinatorial incorporation of PITPβ BOX1 and BOX2 residues, BOX1 and BOX3 residues, or BOX2 and BOX3 residues into the PITPα context yielded chimeras that efficiently targeted to Golgi membranes (Figures 4, A and B). For reasons detailed below, we were particularly interested in any role BOX2 or its individual residues may play in the localization of PITPβ to the TGN. In that regard, the dispensability of BOX2 residues for PITPβ Golgi targeting was further emphasized in a swap of BOX2 from PITPα for the PITPβ BOX2 in the context of a PITPα chimera that harbors the C-terminal 28 PITPβ residues. This PITPαQET-TSA chimera is composed entirely of PITPα primary sequence, save 24 of 28 C-terminal residues where the PITPα BOX2 motif is substituted for that of PITPβ. Yet, PITPαQET-TSA retains its capacity to target to Golgi membranes (Figures 4, A and B). Again, these conclusions were confirmed when these same chimeras were expressed in COS-7 cells and the corresponding localization profiles were scored (Supplemental Materials, Figure S3). The data indicate that the combination of any two of the PITPβ BOX motifs is sufficient to generate a robust Golgi localization signal in the context of PITPα.
PITPβ Ser262 Is Nonessential for Golgi Localization
The dispensability of BOX2 for PITPβ localization to TGN membranes was counter to the findings of van Tiel et al. (2002), who reported that phosphorylation of a BOX2 residue (S262) is essential for PITPβ targeting to Golgi membranes. Yet, our demonstration that swap of PITPβ BOX2 residues significantly improved PITPα targeting to Golgi membranes (i.e., the PITPαKGSR construct; Figure 4A) is consistent with a more substantial role for BOX2 in Golgi targeting. To investigate these paradoxical findings in more detail, we analyzed the involvement of S262 itself in PITPβ localization. Consistent with the results of the BOX2 chimera experiments, PITPβS262A, PITPβS262D, PITPβS262E, and PITPβS262P all targeted to Golgi membranes as efficiently as the PITPβ control (Figure 4C). These results were recapitulated in the context of COS-7 cells (Supplemental Figures and Supplemental Table S1).
To determine whether an analogous phosphorylation may be sufficient to redirect PITPα to Golgi membranes, we incorporated phosphomimetic amino acids at the corresponding P263 residue of PITPα to generate the PITPαP263D and PITPαP263E mutants. The ability of each to associate with MEF TGN membranes was then assessed. Neither PITPαP263D nor PITPαP263E targeted to Golgi membranes any more efficiently than the PITPα control (Figure 4D). We repeated these analyses in COS-7 cells. Again, neither incorporation of the P263S missense substitution, nor P263E, into the context of PITPα-GFP had any major effect on the intracellular distribution of the chimera (Supplemental Materials, Supplemental Table S1).
A Novel PITPβ Isoform with Altered BOX2 Residues Targets to the TGN
All of the experiments described above rely on mutagenesis of canonical PITPβ. The novel murine PITPβ spliceoform described above (PITPβQGQR) differs from canonical PITPβ predominantly in BOX2 (Figure 4E). Interestingly, S262 of canonical PITPβ is Q262 in PITPβQGQR. PCR assays indicate both PITPβ and PITPβQGQR are expressed in PITPα−/− MEFs at approximately equal levels.
Localization experiments using GFP-tagged forms show PITPβQGQR, like PITPβ, associates with MEF Golgi membranes (Figure 4E). These results are consistent with data indicating S262 is nonessential for efficient targeting of PITPβ species to that compartment. PITPβQGQR displays a single nonconserved serine residue (S259) in the region of divergence, but the S259A mutation has no effect on targeting of a PITPβQGQR-GFP chimera to TGN membranes (Figure 4E). These data lead us to form two conclusions in addition to S262 dispensability for PITPβ targeting to Golgi. First, S259 does not offer an alternative phosphorylation site required for PITPβQGQR association with Golgi membranes. Second, mammalian cells can express more than one PITPβ species in cells but, in this case, both PITPβ and PITPβQGQR isoforms home to Golgi membranes. Comparison of the localization profiles of PITPβ-GFP and PITPβQGQR-GFP chimeras indicates both target to the TGN, although PITPβQGQR-GFP also exhibits partial colocalization with the medial-Golgi marker mannosidase II (Supplemental Materials, Figure S4, A and B). PITPβQGQR-GFP also appears to target more efficiently to cis-Golgi membranes than does PITPβ-GFP (Supplemental Materials, Figure S4C). Thus, PITPβQGQR may represent more of a pan-Golgi PITPβ than the canonical PITPβ.
PITPβ Targeting to Golgi Membranes Is Independent of PtdIns- or SM-Transfer Activity
As described in detail below, the C-terminal 28 PITPβ residues are sufficient to redirect PITPα to Golgi membranes but are insufficient to target a naive protein to this intracellular location. These data suggest that multiple localization signals may be involved in localizing PITPβ to the TGN and that a subset of these determinants likely resides in the PITP domain itself. As PITP domains represent specific lipid-binding modules, PITPβ lipid-binding properties themselves could potentially define components of a combinatorial targeting signal.
To test this possibility, we took advantage of mutant PITPβ derivatives with selective defects in the loading/transfer of defined phospholipid substrates. Given that PITPβ is distinguished from PITPα in its ability to bind SM in addition to PtdIns and PtdCho, one attractive possibility is that SM loading contributes to the affinity of PITPβ for Golgi membranes. Data obtained from three independent lines of experimentation demonstrate that SM-loading and Golgi targeting are not strictly coupled. First, wholesale swap of the PITPα C-terminal 28 residues into the context of PITPβ leads to a PITP chimera that fails to associate with the Golgi complex (see Figure 3, A and B above). Yet, this PITPβ/α chimera exhibits robust SM transfer in vitro (Figure 5A). Second, reciprocal swap of the PITPβ C-terminal 28 residues into the context of PITPα results in a hybrid PITPα/β that efficiently targets to the Golgi complex (see Figure 3, A and B above). This PITPα/β chimera, while elaborating both PtdIns- and PtdCho- transfer activity, exhibits no detectable SM-loading/transfer activity in vitro (Figure 5A). Third, substitution of only two amino acids in PITPα to the cognate PITPβ residues is sufficient to confer robust SM-transfer activity to PITPα (PITPαLF221,225IL; Figure 5A). Reciprocally, conversion of those cognate PITPβ residues to the corresponding PITPα residues strongly and specifically compromises the SM-transfer activity of PITPβ (PITPβIL220,224LF; Figure 5A). In neither case does modulation of SM-loading/transfer affect PtdIns- or PtdCh-transfer activity or PITP localization. PITPβIL220,224LF fully retains the ability to target efficiently to Golgi membranes, whereas PITPαLF221,225IL does not (Figure 5B).
To probe the involvement of PtdIns loading in targeting of PITPβ to the TGN, we took advantage of mutants specifically defective in PtdIns-binding/transfer activity. PITPα residue T59 is essential for PtdIns-binding/transfer, but plays no role in PtdCho-binding/transfer (Alb et al., 1995). The selective effects of the mutant translated to the PITPβ context as biochemical analyses confirmed that the corresponding PITPβ mutant (PITPβT58D) retains high levels of both PtdCho- and SM-transfer activity in the absence of measurable PtdIns-transfer activity (unpublished data). We constructed the PITPβT58D-GFP chimera and assessed its subcellular distribution in PITPα−/− MEFs. Imaging experiments show ca. 90% of the cells expressing PITPβT58D-GFP exhibited robust Golgi staining profiles, a score recapitulating that of the PITPβ control (Figure 5C). When the experiment was performed in COS-7 cells, PITPβT58D-GFP assumed an obvious Golgi localization in 91% of the 99 expressing cells imaged (90 Golgi/9 non-Golgi profiles). Thus, PtdIns-loading/transfer does not contribute to PITPβ targeting to Golgi membranes.
Uncoupling of Phospholipid-Transfer Activity from PITPβ Targeting to Golgi Membranes
Although neither PtdIns- or SM-loading/transfer activity are required for PITPβ association with the TGN, a combination of phospholipid-loading/transfer activities could contribute to such targeting. We therefore tested whether residue Ser165 is required for targeting of PITPβ to the Golgi complex. This residue lies in the PITP regulatory loop (Yoder et al., 2001). The side-chain status of this residue is functionally important because incorporation of either alanine or glutamate at this position abolishes all PITPα phospholipid-transfer activities (van Tiel et al., 2000).
The PITPβS165A mutant was generated and its biochemical properties were assayed in vitro. As reported by van Tiel et al. (2000) for PITPαS166A, we too find PITPβS165A exhibited no measurable PtdIns-, PtdCho-, or SM-transfer activity, even though full-length PITPβ was readily detected in the cytosolic fractions by immunoblot (unpublished data). The S165A missense substitution had no effect on PITPβ localization when assayed in PITPα−/− MEFs. PITPβS165A-GFP was targeted as efficiently to Golgi membranes as the PITPβ-GFP control (Figure 5D). Because PITPβS165A exhibits no detectable phospholipid-transfer activity, PITPβS165A-GFP association with Golgi membranes is independent of phospholipid-transfer activity.
We also expressed PITPβS165,262A-GFP in PITPα−/− MEFs and assessed the ability of this double mutant to target to TGN membranes. This experiment was motivated by the demonstration that PITPα residue S166 and PITPβ residue S165 are minor PKC phosphorylation sites (van Tiel et al., 2000, 2002). PITPβS165,262A is therefore devoid of the PKC phosphorylation sites for which there is any evidence of use. Yet, PITPβS165,262A-GFP homes to TGN membranes in PITPα−/− MEFs (Figure 5D). These data provide further support for our conclusion that PKC-mediated phosphorylation of PITPβ (at least on the presently known S165 and S262 sites) does not play an essential role in localization of this protein to mammalian TGN membranes.
A WW Motif Common to PITPα and PITPβ Contributes to Association of PITPβ with TGN Membranes
PITPα occupied with either PtdCho or PtdIns crystallizes as a dimer, and the dimerization interface is defined by two small hydrophobic motifs displayed on exposed loops of the PITP fold (Figure 6A; Yoder et al., 2001; Tilley et al., 2004). These two motifs are represented by 72FVRML76 and W203W204 of PITPα and 71FVRMI75 and W202W203 of PITPβ, respectively, and both are suggested to play critical roles in mediating membrane binding by PITPα (Schouten et al., 2002; Tilley et al., 2004). To test whether 71FVRMI75 or W202W203 contribute to localization of PITPβ to the murine TGN, we mutagenized these motifs in the context of a PITPβ-GFP reporter and analyzed localization of the corresponding reporters in PITPα−/− MEFs. The comprehensive data are quantified in Figure 6B, and representative imaging profiles for the corresponding mutant PITPβ forms are given in Figure 6C.
Consistent with the view that the WW motif contributes to membrane binding, the PITPβWW202,203AA-GFP chimera failed to associate stably with PITPα−/− MEF TGN membranes. By contrast, PITPβMI74,75AA-GFP retained near wild-type efficiencies for TGN targeting (Figure 6, B and C). Although there is a consistent diminution in TGN association for the PITPβMI74,75AA-GFP chimera, the defect is minor. Essentially the same results were obtained with PITPβF71A-GFP and PITPβVR72,73AA-GFP chimeras. By contrast, the individual W202 and W203 residues each play important roles in localization of PITPβ, as evidenced by the obvious defects in PITPβW202A-GFP and PITPβW203A-GFP association with MEF TGN membranes (Figure 6B).
Previous data obtained from PtdIns loading assays performed with permeabilized cells indicated PITPαWW202,203AA is strongly defective in PtdIns loading and is incompetent for the membrane interaction step of a phospholipid-transfer reaction (Tilley et al., 2004). We obtained two lines of evidence that are not congruent with this conclusion, at least in the PITPβ context. First, biochemical assays for phospholipid-transfer activity demonstrate PITPβMI74,75AA and PITPβWW202,203AA exhibit significant levels of PtdIns-, PtdCho-, and SM-transfer activity in vitro (Figure 7A). Second, we again took advantage of the yeast phenotypic rescue assay described above to independently assess whether the phospholipid-binding/transfer activities of the double mutant PITPs were strongly compromised. The results from that rescue assay also support the conclusion that both PITPβMI74,75AA and PITPβWW202,203AA are substantially functional proteins. As shown in Figure 7B, a wild-type yeast strain grows robustly at 30 and 37°C. By contrast, an isogenic sec14-1ts strain grows only at the permissive temperature of 30°C and not at all at the restrictive temperature of 37°C, i.e., the temperature at which the thermolabile sec14-1ts gene product is inactive. PITPβ expression from either a strong constitutive promoter (PPGK) or a weaker constitutive promoter (PSEC14) restored essentially wild-type growth properties to the sec14-1ts yeast mutant. Similarly, expression of either PITPβMI74,75AA or PITPβWW202,203AA from the PPGK driver also supported efficient rescue of sec14-1ts-associated growth defects at 37°C (Figure 7B). Rescue mediated by both mutant PITPβ forms was also recorded when the mutant proteins were expressed from the weaker PSEC14 promoter, although quality of rescue was diminished slightly under those conditions for PITPβWW202,203AA (Figure 7B).
Taken together, the data indicate neither PITPβMI74,75AA nor PITPβWW202,203AA exhibit dramatic defects in phospholipid-transfer activity and phospholipid loading. Because these various double mutant PITPs retain phospholipid-transfer activity, the PITP fold must remain unperturbed in the double mutants. We conclude that the TGN localization defects associated with mutation of W202W203 cannot be simply ascribed to a wholesale inability of PITPβ to interact with membranes.
PITPβ Motifs Sufficient for Redirection of GFP to the TGN
The collective data suggest it is the combination of weak membrane targeting/association signals defined by the C-terminal BOX residues and the W202W203 motif that specifies PITPβ association with TGN membranes. To test this prediction we fused the C-terminal 35 and 71 residues of PITPβ to the GFP C-terminus. The former chimera (GFP-PITPβ237–271) elaborates all three of the C-terminal BOX motifs, is predicted to preserve the C-terminal PITPβ helix, but lacks both the W202W203 motif and obviously lacks an intact PITP fold. The latter chimera (GFP-PITPβ201–271) elaborates both W202W203 and the three BOX motifs, is predicted to maintain the ultimate two PITPβ helices, but lacks an intact PITP fold. The chimeras were expressed in PITPα−/− MEFs and their respective intracellular distributions were determined.
As expected, the GFP control distributes to the cytoplasm and nuclear matrix and fails to associate with Golgi membranes as evidenced by its lack of colocalization with the TGN marker TGN38 (Figure 8). This profile was recapitulated for the GFP-PITPβ237–271 chimera that harbors all three of the C-terminal BOX motifs but no W202W203 motif. By contrast, GFP-PITPβ201–271 targeted efficiently to PITPα−/− MEF TGN as demonstrated by its colocalization with TGN38-positive structures (Figure 8). Some 85% of the cells showed coincident localization of GFP-PITPβ201–271 with the TGN. Thus, linking the PITPβ W202W203 motif with the three BOX motifs generated a targeting module that satisfies the dual criteria of necessity and sufficiency for specific association with TGN membranes.
PITPβ Association with TGN Membranes and Action of PKCs
The evidence reported herein is incongruent with the claim that PITPβ association with the Golgi complex depends on conventional PKC-mediated phosphorylation of S262 (van Tiel et al., 2002). We therefore investigated what effect inactivation of conventional PKCs has on localization of PITPβ to the TGN. As a first approach, we applied a blunt pharmacological strategy. PITPα−/− MEFs were intoxicated with two different inhibitors of conventional PKCs, and PITPβ distribution of was monitored at various times postchallenge. Neither GF109203X nor chelerythrine chloride intoxication had any effect, at any time, on the association of PITPβ with the MEF TGN (Figures 9, A and B). The efficacy of pharmacological challenge in inhibiting PKC activity was confirmed by monitoring phospho-MARCKS upon inhibitor challenge (Figure 9C).
In the pharmacological challenge experiments we used the NT-PITP-antibody as reporter. Thus, we were unable to distinguish between PITPβ and PITPβQGQR in those experiments. We therefore repeated these experiments using a PITP-GFP reporter and arrived at the same conclusions. PITPβ-GFP localization to the MEF TGN was resistant to challenge with GF109203X or chelerythrine chloride under the same conditions described in Figure 9C. Some 72% of mock-challenged MEFs exhibited a TGN profile for PITPβ-GFP (136/188 cells), and similar results were obtained upon MEF intoxication with GF109203X (78%; 192/247 cells) or chelerythrine chloride (85%; 109/129 cells).
In a second approach, we derived MEFs from embryos individually nullizygous for either the nonconventional PKCδ or PKCε isoforms. Both of these isoforms localize to the mammalian Golgi complex (Lehel et al., 1995; Storz et al., 2004) and therefore represent reasonable candidate PKCs for which PITPβ is a physiological substrate. Again, localization to the murine Golgi of endogenous PITPβ species was unimpressed by genetic ablation of the PKCε or the PKCδ isoform (see Supplemental Materials, Figure S5A). Although we concur with van Tiel et al. (2002) that PITPβ can be phosphorylated by PKCs in vivo (i.e., PMA stimulates phosphorylation of endogenous PITPβ), we believe this effect is likely mediated through PKCδ because PMA challenge has no obvious effect on PITPβ phosphorylation status in PKCδ−/− MEFs (see Supplemental Materials, Figure S5B). Given that the Golgi-associated PKCδ plays no obligate role in targeting PITPβ to the TGN, we suggest PMA-stimulated phosphorylation of PITPβ reflects elevated PKCδ activity evoking an adventitious phosphorylation of vicinal proteins on Golgi membranes.
DISCUSSION
Herein, we identify endogenous PITPβ as a peripheral protein of mammalian TGN (and ER) membranes and describe a mechanism for PITPβ localization to those membranes. This mechanism involves four elements that define two distinct categories of targeting information. The first consists of three functionally redundant motifs that reside in the PITPβ C-terminal 28 residues. The second is represented by a W202W203 motif required for PITPβ association with TGN membranes. We posit these two sets of elements cooperate to localize PITPβ to the mammalian TGN. The cooperative contribution of both sets of elements generates a modular targeting code both necessary and sufficient for specific homing of proteins to the TGN.
How is specificity of targeting determined? The three motifs embedded in the C-terminal 28 PITPβ residues represent the most logical candidates for specificity elements. The rationale is threefold. First, each motif defines a region of primary sequence divergence between PITPβ and PITPα. Second, the presence of at least one element is necessary to preserve PITPβ localization to the TGN. Third, transplantation of any two motifs into PITPα efficiently redirects this protein to the TGN. Thus, the three C-terminal elements satisfy the dual criteria of necessity and sufficiency for specifying localization of a PITP reporter to TGN membranes. Whether the C-terminal specificity elements engage a proteinaceous receptor or recognize some lipid platform unique to the TGN remains an open question. However, we find PITPβ association with Golgi membranes is sensitive to brefeldin A, indicating a dependence on a functional ARF (or ARL) GTPase cycle.
We suggest the W202W203 motif contributes to PITPβ association with TGN membranes by providing a nonspecific and low-affinity membrane-binding site. Our demonstration that PITPβ association with TGN membranes is compromised by mutations of the W202W203 motif supports this view. The concept is also consistent with structural data indicating W202W203 lies on a loop oriented on the same face of the PITPβ as the mouth of the phospholipid-binding pocket (Yoder et al., 2001; Tilley et al., 2004). The W202W203 motif does not confer specificity of membrane binding because this element is common to both PITPα and PITPβ, and these PITPs exhibit distinct localization profiles.
Although the idea that W202W203 functions in a nonspecific and low-affinity membrane-binding reaction has its justification, other data do not readily conform to such a model. Alanine scanning mutagenesis indicates this motif has no major role in PITPβ phospholipid-transfer activity or loading with a phospholipid substrate. It could be argued this result is inconsistent with a nonspecific membrane-binding function for W202W203. We do not favor this interpretation because the phospholipid-transfer assays and yeast phenotypic rescue assay that we employ as functional tests are biased in favor of transient membrane associations. Such assays likely minimize the importance of a stabilization of membrane-binding function for W202W203.
The various phospholipid loading properties of PITPβ do not contribute in any obvious way to its association with the TGN. Of particular interest is the case of SM-binding/transfer because this property suggested an attractive mechanism for the specific homing of PITPβ to Golgi membranes. This mechanism was based on the dual arguments that PITPβ is distinguished from PITPα by its ability to load with SM and that the major site of SM synthesis in mammalian cells is the Golgi complex (Futerman et al., 1990; Bankaitis, 2002). The fact that the TGN-targeting mechanism does not survey the phospholipid-bound state of PITPβ also has implications for models invoking a delivery function for PITPβ in supply of TGN membranes with PtdIns (e.g., to support TGN phosphoinositide pools). Other PITPs likely help execute such functions (Litvak et al., 2005).
Our data indicate a concerted action of specific and general membrane-binding elements in the targeting of PITPβ to the TGN. We find the targeting process is not obligately coupled to PITPβ phosphorylation of residue S262 by conventional PKCs or at least two nonconventional PKC isoforms. That conclusion is supported by both PKCδ−/− and PKCε−/− MEF data, and the general resistance of PITPβ TGN association to challenge of cells with inhibitors of conventional PKCs. Moreover, PITPβ TGN localization signals accommodate an array of side chains at residue S262—indicating neither S262 itself, nor its phosphorylation, is an essential component of PITPβ TGN-targeting information. The fact that combined mutagenesis to alanine of PITPβ residues S262 and S165 (a minor PKC phosphorylation site in vitro) has no effect on PITPβ localization further emphasizes this point. We expect these general findings will hold equally true for the novel PITPβQGQR spliceoform.
Our collective results are comprehensively at odds with the report of van Tiel et al. (2002), who claim that phosphorylation of residue S262 is required for Golgi membrane localization of PITPβ. Can these conflicting conclusions be reconciled? van Tiel et al. (2002) utilized stable NIH3T3 cell lines that overproduce PITPβ for their studies. One formal possibility is that the visible pool of PITPβ in those stable cell lines behaves differently from the endogenous pool. We do not favor this interpretation because the PITPβ-GFP chimera we used consistently localized to TGN membranes with the same fidelity as endogenous PITPβ. Also, because van Tiel et al. were clearly monitoring PITPβ, and not PITPβQGQR, the discrepancies cannot be ascribed to spliceoform issues. The possibility that NIH3T3 cells used by van Tiel et al. behave differently than MEFs or COS-7 cells cannot be formally excluded, although the absolute efficiencies of PITP-GFP targeting to the TGN in MEFs and COS-7 cells were consistently similar.
The van Tiel et al. (2002) report suggests several areas of experimentation that leave room for ambiguity of interpretation. First, the parameters of what constitutes a Golgi profile in their studies were not defined by the use of known Golgi markers, and no quantification of the imaging data was presented. Second, there was no description of controls for monitoring what effect pharmacological inhibition of conventional PKCs has on Golgi organization in their cell lines. Perturbation of Golgi organization may complicate interpretation of PITPβ localization data. Third, the scope of the mutagenesis from which van Tiel et al. reached their conclusions was limited to a single mutant (PITPβS262A). The issue of sufficiency of S262 phosphorylation for PITP targeting to Golgi membranes was not addressed. Finally, the arguments that PITPβ residue S262 represents a major in vivo phosphorylation site are based on in vitro schemes using recombinant proteins (van Tiel et al., 2002). Direct identification of phosphorylation sites in endogenous PITPβ is required to resolve this important issue.
A remarkable facet of the biological activities of PITPs is the dedication with which these proteins couple to specific physiological functions (Routt and Bankaitis, 2004; Phillips et al., 2006). The example of PITPα and PITPβ is clear testimony to this effect as these closely related PITP isoforms assume radically different localization profiles and are functionally nonredundant. Our finding that murine cells can express what are likely two biochemically indistinguishable PITPβ spliceoforms, and yet localize both to similar regions of the Golgi stack, suggests that even finer functional distinctions may yet exist. Our analyses of how PITPβ targets to specific Golgi subcompartments gives us the ability to interchange, in a rational and directed way, either the localization, or the phospholipid-binding properties, or both, of PITPα and of defined PITPβ spliceoforms. This facility permits direct experimental address, in the mouse, of whether the distinct biological activities of these proteins are strictly a function of protein localization or whether differential phospholipid-binding properties also contribute to function.
Supplementary Material
ACKNOWLEDGMENTS
We thank Con Beckers and Doug Cyr for helpful discussions and insightful criticisms throughout this work, and the assistance of Michael Chua and Jan Sinyshyn of the Michael Hooker Microscopy Core (UNC) is acknowledged. Bruce Hamilton (UCSD), Hans-Peter Hauri (Basel), and George Helmkamp, Jr. generously donated antibodies for this study. Oligonucleotide primer synthesis and DNA sequence analyses were performed via the Lineberger Comprehensive Cancer Center Genome Analysis and Nucleic Acids Core facility. This work was supported by National Institutes of Health (NIH) Grants NS37723 and NS42651 awarded to V.A.B. K.E.I. was supported by a Cell and Molecular Biology Training Grant from the NIH (T32 GM08581), and R.P.H.H. was supported in part by a North Atlantic Treaty Organization Science Fellowship of the Netherlands Organization for Scientific Research (NWO).
Abbreviations used:
- GFP
green fluorescent protein
- MEF
murine embryonic fibroblast
- PITP
phosphatidylinositol transfer protein
- PtdCho
phosphatidylcholine
- PtdIns
phosphatidylinositol
- SM
sphingomyelin
- TGN
trans-Golgi network
Footnotes
This article was published online ahead of print in MBC in Press (http://www.molbiolcell.org/cgi/doi/10.1091/mbc.E06-01-0089) on March 15, 2006.
The online version of this article contains supplemental material at MBC Online (http://www.molbiolcell.org).
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