TABLE 1.
Characteristics of genetic markers in this linkage map
| Probe | Marker type | Source | No. of probes | No. of loci | Status | Reference |
|---|---|---|---|---|---|---|
| RFLP | EST_BIF | Immature flower library of B. rapa cv. Jangwon | 114 | 157 | pBluescript | Kim et al. (1996); Lim et al. (2000) |
| EST_BAN | Anther library of B. rapa cv. Jangwon | 176 | 235 | pBluescript | ||
| EST_BDS | Dark-grown seeding library of B. rapa cv. Jangwon | 45 | 55 | pBluescript | ||
| EST_BR | Root library of B. rapa cv. Jangwon | 24 | 27 | pBluescript | ||
| At4GTS | Chromosome 4-located genes of Arabidopsis cv. Colombia | 10 | 10 | pGemT | GenBank | |
| At5GTS | Chromosome 5-located genes of Arabidopsis cv. Colombia | 14 | 17 | pGemT | GenBank | |
| AtGene | Full length of expressed gene from A. thaliana | 2 | 2 | pGemT | GenBank | |
| BrGene | Full length of expressed gene from B.rapa | 11 | 17 | pGemT | BrFLC_AY273164; BrAGL20_AY345237, etc. | |
| PCR | SSR | R1–R10-located SSR markers | 11 | 11 | Primer | Lowe et al. (2004) |
| SSR | R1–R10-located SSR markers | 10 | 10 | Primer | Suwabe et al. (2002) | |
| BrH80A08_FLC1 | 5′-ttcccaagcttgctggtact-3′ 5′-gagatttccctcgcttgatg-3′ | 1 | 1 | Primer | KBrH80A08_AC155344 | |
| BrH04D11_FLC2 | 5′-gcgccaattataaatttgattttc-3′ 5′-tcctcctgaacctggtcttg-3′ | 1 | 1 | Primer | KBrH04D11_AC155341 | |
| BrH80C09_MAF | 5′-cagtgaagttcaaccgcagta-3′ 5′-catgagtgaacataaaacagtgaaa-3′ | 1 | 1 | Primer | KBrH80C09_A166741 | |
| Random primer | Operon primer S14 | 1 | 1 | Primer | BM commercial product | |
| Total | 421 | 545 |