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. 1996 Nov;112(3):905–917. doi: 10.1104/pp.112.3.905

De novo purine synthesis in Arabidopsis thaliana. II. The PUR7 gene encoding 5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole synthetase is expressed in rapidly dividing tissues.

J F Senecoff 1, E C McKinney 1, R B Meagher 1
PMCID: PMC158018  PMID: 8938402

Abstract

The small genome size and excellent genetics of Arabidopsis, as well as the ease with which it is transformed, make it a superb candidate for molecular genetic studies of the purine biosynthetic pathway. Herein we report the isolation, physical characterization, and dissection of the expression patterns of the single gene encoding 5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole synthetase. This enzyme, encoded by the PUR7 gene, catalyzes aspartate addition at the alpha-amino group to the growing purine backbone. The expression of the PUR7 as directed by the 5' region, containing the promoter, mRNA leader, and leader intron, was examined in Arabidopsis using a transgenic reporter system. Our analysis demonstrates that the highest level of purine biosynthesis occurs in mitotically active tissues of the plant. Furthermore, purine biosynthesis appears to be under developmental and hormonal regulation. Inhibition of purine biosynthesis using substrate analogs results in arrested plant development and induction of purine gene expression. Purine nucleotides and their derivatives provide multiple cofactors for a variety of metabolic processes. Our findings begin to identify some of the regulatory mechanisms that affect the production of purine nucleotides in Arabidopsis and may give important insights into nitrogen metabolism in general.

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Selected References

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  1. Atkins C. A., Ritchie A., Rowe P. B., McCairns E., Sauer D. De Novo Purine Synthesis in Nitrogen-Fixing Nodules of Cowpea (Vigna unguiculata [L.] Walp.) and Soybean (Glycine max [L.] Merr.). Plant Physiol. 1982 Jul;70(1):55–60. doi: 10.1104/pp.70.1.55. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. Baron A. C., Tobin T. H., Wallsgrove R. M., Tobin A. K. A Metabolic Control Analysis of the Glutamine Synthetase/Glutamate Synthase Cycle in Isolated Barley (Hordeum vulgare L.) Chloroplasts. Plant Physiol. 1994 May;105(1):415–424. doi: 10.1104/pp.105.1.415. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. Chapman K. A., Delauney A. J., Kim J. H., Verma D. P. Structural organization of de novo purine biosynthesis enzymes in plants: 5-aminoimidazole ribonucleotide carboxylase and 5-aminoimidazole-4-N-succinocarboxamide ribonucleotide synthetase cDNAs from Vigna aconitifolia. Plant Mol Biol. 1994 Jan;24(2):389–395. doi: 10.1007/BF00020176. [DOI] [PubMed] [Google Scholar]
  4. Dolan L., Janmaat K., Willemsen V., Linstead P., Poethig S., Roberts K., Scheres B. Cellular organisation of the Arabidopsis thaliana root. Development. 1993 Sep;119(1):71–84. doi: 10.1242/dev.119.1.71. [DOI] [PubMed] [Google Scholar]
  5. Guerche P., Tire C., De Sa F. G., De Clercq A., Van Montagu M., Krebbers E. Differential Expression of the Arabidopsis 2S Albumin Genes and the Effect of Increasing Gene Family Size. Plant Cell. 1990 May;2(5):469–478. doi: 10.1105/tpc.2.5.469. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. Hemerly A. S., Ferreira P., de Almeida Engler J., Van Montagu M., Engler G., Inzé D. cdc2a expression in Arabidopsis is linked with competence for cell division. Plant Cell. 1993 Dec;5(12):1711–1723. doi: 10.1105/tpc.5.12.1711. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Huang S., An Y. Q., McDowell J. M., McKinney E. C., Meagher R. B. The Arabidopsis thaliana ACT4/ACT12 actin gene subclass is strongly expressed throughout pollen development. Plant J. 1996 Aug;10(2):189–202. doi: 10.1046/j.1365-313x.1996.10020189.x. [DOI] [PubMed] [Google Scholar]
  8. Jefferson R. A., Kavanagh T. A., Bevan M. W. GUS fusions: beta-glucuronidase as a sensitive and versatile gene fusion marker in higher plants. EMBO J. 1987 Dec 20;6(13):3901–3907. doi: 10.1002/j.1460-2075.1987.tb02730.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  9. Kim J. H., Delauney A. J., Verma D. P. Control of de novo purine biosynthesis genes in ureide-producing legumes: induction of glutamine phosphoribosylpyrophosphate amidotransferase gene and characterization of its cDNA from soybean and Vigna. Plant J. 1995 Jan;7(1):77–86. doi: 10.1046/j.1365-313x.1995.07010077.x. [DOI] [PubMed] [Google Scholar]
  10. Ludwig S. R., Oppenheimer D. G., Silflow C. D., Snustad D. P. Characterization of the alpha-tubulin gene family of Arabidopsis thaliana. Proc Natl Acad Sci U S A. 1987 Aug;84(16):5833–5837. doi: 10.1073/pnas.84.16.5833. [DOI] [PMC free article] [PubMed] [Google Scholar]
  11. Ma H., Yanofsky M. F., Meyerowitz E. M. AGL1-AGL6, an Arabidopsis gene family with similarity to floral homeotic and transcription factor genes. Genes Dev. 1991 Mar;5(3):484–495. doi: 10.1101/gad.5.3.484. [DOI] [PubMed] [Google Scholar]
  12. McDowell J. M., An Y. Q., Huang S., McKinney E. C., Meagher R. B. The arabidopsis ACT7 actin gene is expressed in rapidly developing tissues and responds to several external stimuli. Plant Physiol. 1996 Jul;111(3):699–711. doi: 10.1104/pp.111.3.699. [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. McDowell J. M., Huang S., McKinney E. C., An Y. Q., Meagher R. B. Structure and evolution of the actin gene family in Arabidopsis thaliana. Genetics. 1996 Feb;142(2):587–602. doi: 10.1093/genetics/142.2.587. [DOI] [PMC free article] [PubMed] [Google Scholar]
  14. Moffatt B., Somerville C. Positive selection for male-sterile mutants of Arabidopsis lacking adenine phosphoribosyl transferase activity. Plant Physiol. 1988 Apr;86(4):1150–1154. doi: 10.1104/pp.86.4.1150. [DOI] [PMC free article] [PubMed] [Google Scholar]
  15. Mylona P., Pawlowski K., Bisseling T. Symbiotic Nitrogen Fixation. Plant Cell. 1995 Jul;7(7):869–885. doi: 10.1105/tpc.7.7.869. [DOI] [PMC free article] [PubMed] [Google Scholar]
  16. Price C. E., Murray A. W. Purine metabolism in germinating wheat embryos. Biochem J. 1969 Nov;115(2):129–133. doi: 10.1042/bj1150129. [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. Schnorr K. M., Nygaard P., Laloue M. Molecular characterization of Arabidopsis thaliana cDNAs encoding three purine biosynthetic enzymes. Plant J. 1994 Jul;6(1):113–121. doi: 10.1046/j.1365-313x.1994.6010113.x. [DOI] [PubMed] [Google Scholar]
  18. Senecoff J. F., Meagher R. B. Isolating the Arabidopsis thaliana genes for de novo purine synthesis by suppression of Escherichia coli mutants. I. 5'-Phosphoribosyl-5-aminoimidazole synthetase. Plant Physiol. 1993 Jun;102(2):387–399. doi: 10.1104/pp.102.2.387. [DOI] [PMC free article] [PubMed] [Google Scholar]
  19. Shelp B. J., Atkins C. A., Storer P. J., Canvin D. T. Cellular and subcellular organization of pathways of ammonia assimilation and ureide synthesis in nodules of cowpea (Vigna unguiculata L. Walp.). Arch Biochem Biophys. 1983 Jul 15;224(2):429–441. doi: 10.1016/0003-9861(83)90229-1. [DOI] [PubMed] [Google Scholar]
  20. Smale S. T., Schmidt M. C., Berk A. J., Baltimore D. Transcriptional activation by Sp1 as directed through TATA or initiator: specific requirement for mammalian transcription factor IID. Proc Natl Acad Sci U S A. 1990 Jun;87(12):4509–4513. doi: 10.1073/pnas.87.12.4509. [DOI] [PMC free article] [PubMed] [Google Scholar]
  21. Yang W. C., de Blank C., Meskiene I., Hirt H., Bakker J., van Kammen A., Franssen H., Bisseling T. Rhizobium nod factors reactivate the cell cycle during infection and nodule primordium formation, but the cycle is only completed in primordium formation. Plant Cell. 1994 Oct;6(10):1415–1426. doi: 10.1105/tpc.6.10.1415. [DOI] [PMC free article] [PubMed] [Google Scholar]

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