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. 1997 Jan;113(1):39–44. doi: 10.1104/pp.113.1.39

Ultraviolet B-Sensitive Rice Cultivar Deficient in Cyclobutyl Pyrimidine Dimer Repair.

J Hidema 1, T Kumagai 1, J C Sutherland 1, B M Sutherland 1
PMCID: PMC158113  PMID: 12223592

Abstract

Repair of cyclobutyl pyrimidine dimers (CPDs) in DNA is essential in most organisms to prevent biological damage by ultraviolet (UV) light. In higher plants tested thus far, UV-sensitive strains had higher initial damage levels or deficient repair of nondimer DNA lesions but normal CPD repair. This suggested that CPDs might not be important for biological lesions. The photosynthetic apparatus has also been proposed as a critical target. We have analyzed CPD induction and repair in the UV-sensitive rice (Oryza sativa L.) cultivar Norin 1 and its close relative UV-resistant Sasanishiki using alkaline agarose gel electrophoresis. Norin 1 is deficient in cyclobutyl pyrimidine dimer photoreactivation and excision; thus, UV sensitivity correlates with deficient dimer repair.

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Selected References

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  1. Bennett P. V., Sutherland B. M. Quantitative detection of single-copy genes in nanogram samples of human genomic DNA. Biotechniques. 1993 Sep;15(3):520–525. [PubMed] [Google Scholar]
  2. Brash D. E., Rudolph J. A., Simon J. A., Lin A., McKenna G. J., Baden H. P., Halperin A. J., Pontén J. A role for sunlight in skin cancer: UV-induced p53 mutations in squamous cell carcinoma. Proc Natl Acad Sci U S A. 1991 Nov 15;88(22):10124–10128. doi: 10.1073/pnas.88.22.10124. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. Brash D. E., Seetharam S., Kraemer K. H., Seidman M. M., Bredberg A. Photoproduct frequency is not the major determinant of UV base substitution hot spots or cold spots in human cells. Proc Natl Acad Sci U S A. 1987 Jun;84(11):3782–3786. doi: 10.1073/pnas.84.11.3782. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Britt A. B., Chen J. J., Wykoff D., Mitchell D. A UV-sensitive mutant of Arabidopsis defective in the repair of pyrimidine-pyrimidinone(6-4) dimers. Science. 1993 Sep 17;261(5128):1571–1574. doi: 10.1126/science.8372351. [DOI] [PubMed] [Google Scholar]
  5. Britt Anne B. DNA DAMAGE AND REPAIR IN PLANTS. Annu Rev Plant Physiol Plant Mol Biol. 1996 Jun;47(NaN):75–100. doi: 10.1146/annurev.arplant.47.1.75. [DOI] [PubMed] [Google Scholar]
  6. Freeman S. E., Blackett A. D., Monteleone D. C., Setlow R. B., Sutherland B. M., Sutherland J. C. Quantitation of radiation-, chemical-, or enzyme-induced single strand breaks in nonradioactive DNA by alkaline gel electrophoresis: application to pyrimidine dimers. Anal Biochem. 1986 Oct;158(1):119–129. doi: 10.1016/0003-2697(86)90599-3. [DOI] [PubMed] [Google Scholar]
  7. Lao K., Glazer A. N. Ultraviolet-B photodestruction of a light-harvesting complex. Proc Natl Acad Sci U S A. 1996 May 28;93(11):5258–5263. doi: 10.1073/pnas.93.11.5258. [DOI] [PMC free article] [PubMed] [Google Scholar]
  8. Li J., Ou-Lee T. M., Raba R., Amundson R. G., Last R. L. Arabidopsis Flavonoid Mutants Are Hypersensitive to UV-B Irradiation. Plant Cell. 1993 Feb;5(2):171–179. doi: 10.1105/tpc.5.2.171. [DOI] [PMC free article] [PubMed] [Google Scholar]
  9. Pang Q., Hays J. B. UV-B-Inducible and Temperature-Sensitive Photoreactivation of Cyclobutane Pyrimidine Dimers in Arabidopsis thaliana. Plant Physiol. 1991 Feb;95(2):536–543. doi: 10.1104/pp.95.2.536. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Quaite F. E., Sutherland B. M., Sutherland J. C. Quantitation of pyrimidine dimers in DNA from UVB-irradiated alfalfa (Medicago sativa L.) seedlings. Appl Theor Electrophor. 1992;2(6):171–175. [PubMed] [Google Scholar]
  11. Quaite F. E., Sutherland J. C., Sutherland B. M. Isolation of high-molecular-weight plant DNA for DNA damage quantitation: relative effects of solar 297 nm UVB and 365 nm radiation. Plant Mol Biol. 1994 Feb;24(3):475–483. doi: 10.1007/BF00024115. [DOI] [PubMed] [Google Scholar]
  12. Sutherland B. M., Bennett P. V., Conlon K., Epling G. A., Sutherland J. C. Quantitation of supercoiled DNA cleavage in nonradioactive DNA: application to ionizing radiation and synthetic endonuclease cleavage. Anal Biochem. 1992 Feb 14;201(1):80–86. doi: 10.1016/0003-2697(92)90176-8. [DOI] [PubMed] [Google Scholar]
  13. Sutherland B. M., Bennett P. V. Human white blood cells contain cyclobutyl pyrimidine dimer photolyase. Proc Natl Acad Sci U S A. 1995 Oct 10;92(21):9732–9736. doi: 10.1073/pnas.92.21.9732. [DOI] [PMC free article] [PubMed] [Google Scholar]
  14. Sutherland J. C., Lin B., Monteleone D. C., Mugavero J., Sutherland B. M., Trunk J. Electronic imaging system for direct and rapid quantitation of fluorescence from electrophoretic gels: application to ethidium bromide-stained DNA. Anal Biochem. 1987 Jun;163(2):446–457. doi: 10.1016/0003-2697(87)90247-8. [DOI] [PubMed] [Google Scholar]
  15. Sutherland J. C., Monteleone D. C., Mugavero J. H., Trunk J. Unidirectional pulsed-field electrophoresis of single- and double-stranded DNA in agarose gels: analytical expressions relating mobility and molecular length and their application in the measurement of strand breaks. Anal Biochem. 1987 May 1;162(2):511–520. doi: 10.1016/0003-2697(87)90427-1. [DOI] [PubMed] [Google Scholar]
  16. Trosko J. E., Mansour V. H. Photoreactivation of ultraviolet light-induced pyrimidine dimers in Ginkgo cells grown in vitro. Mutat Res. 1969 Jan-Feb;7(1):120–121. doi: 10.1016/0027-5107(69)90056-6. [DOI] [PubMed] [Google Scholar]
  17. Trosko J. E., Mansour V. H. Response of tobacco and Haplopappus cells to ultraviolet irradiation after posttreatment with photoreactivating light. Radiat Res. 1968 Nov;36(2):333–343. [PubMed] [Google Scholar]
  18. Ziegler A., Jonason A. S., Leffell D. J., Simon J. A., Sharma H. W., Kimmelman J., Remington L., Jacks T., Brash D. E. Sunburn and p53 in the onset of skin cancer. Nature. 1994 Dec 22;372(6508):773–776. doi: 10.1038/372773a0. [DOI] [PubMed] [Google Scholar]
  19. Ziegler A., Leffell D. J., Kunala S., Sharma H. W., Gailani M., Simon J. A., Halperin A. J., Baden H. P., Shapiro P. E., Bale A. E. Mutation hotspots due to sunlight in the p53 gene of nonmelanoma skin cancers. Proc Natl Acad Sci U S A. 1993 May 1;90(9):4216–4220. doi: 10.1073/pnas.90.9.4216. [DOI] [PMC free article] [PubMed] [Google Scholar]

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