Abstract
We demonstrated that the GCC box, which is an 11-bp sequence (TAAGAGCCGCC) conserved in the 5' upstream region of ethylene-inducible pathogenesis-related protein genes in Nicotiana spp and in some other plants, is the sequence that is essential for ethylene responsiveness when incorporated into a heterologous promoter. Competitive gel retardation assays showed DNA binding activities to be specific to the GCC box sequence in tobacco nuclear extracts. Four different cDNAs encoding DNA binding proteins specific for the GCC box sequence were isolated, and their products were designated ethylene-responsive element binding proteins (EREBPs). The deduced amino acid sequences of EREBPs exhibited no homology with those of known DNA binding proteins or transcription factors; neither did the deduced proteins contain a basic leucine zipper or zinc finger motif. The DNA binding domain was identified within a region of 59 amino acid residues that was common to all four deduced EREBPs. Regions highly homologous to the DNA binding domain of EREBPs were found in proteins deduced from the cDNAs of various plants, suggesting that this domain is evolutionarily conserved in plants. RNA gel blot analysis revealed that accumulation of mRNAs for EREBPs was induced by ethylene, but individual EREBPs exhibited different patterns of expression.
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- A simple and general method for transferring genes into plants. Science. 1985 Mar 8;227(4691):1229–1231. doi: 10.1126/science.227.4691.1229. [DOI] [PubMed] [Google Scholar]
- Broglie K. E., Biddle P., Cressman R., Broglie R. Functional analysis of DNA sequences responsible for ethylene regulation of a bean chitinase gene in transgenic tobacco. Plant Cell. 1989 Jun;1(6):599–607. doi: 10.1105/tpc.1.6.599. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Cass L. G., Kirven K. A., Christoffersen R. E. Isolation and characterization of a cellulase gene family member expressed during avocado fruit ripening. Mol Gen Genet. 1990 Aug;223(1):76–86. doi: 10.1007/BF00315799. [DOI] [PubMed] [Google Scholar]
- Chang C., Kwok S. F., Bleecker A. B., Meyerowitz E. M. Arabidopsis ethylene-response gene ETR1: similarity of product to two-component regulators. Science. 1993 Oct 22;262(5133):539–544. doi: 10.1126/science.8211181. [DOI] [PubMed] [Google Scholar]
- Cordes S., Deikman J., Margossian L. J., Fischer R. L. Interaction of a developmentally regulated DNA-binding factor with sites flanking two different fruit-ripening genes from tomato. Plant Cell. 1989 Oct;1(10):1025–1034. doi: 10.1105/tpc.1.10.1025. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Deikman J., Fischer R. L. Interaction of a DNA binding factor with the 5'-flanking region of an ethylene-responsive fruit ripening gene from tomato. EMBO J. 1988 Nov;7(11):3315–3320. doi: 10.1002/j.1460-2075.1988.tb03202.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Deikman J., Kline R., Fischer R. L. Organization of Ripening and Ethylene Regulatory Regions in a Fruit-Specific Promoter from Tomato (Lycopersicon esculentum). Plant Physiol. 1992 Dec;100(4):2013–2017. doi: 10.1104/pp.100.4.2013. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Egan S. E., Weinberg R. A. The pathway to signal achievement. Nature. 1993 Oct 28;365(6449):781–783. doi: 10.1038/365781a0. [DOI] [PubMed] [Google Scholar]
- Eyal Y., Meller Y., Lev-Yadun S., Fluhr R. A basic-type PR-1 promoter directs ethylene responsiveness, vascular and abscission zone-specific expression. Plant J. 1993 Aug;4(2):225–234. doi: 10.1046/j.1365-313x.1993.04020225.x. [DOI] [PubMed] [Google Scholar]
- Fukuda Y., Ohme M., Shinshi H. Gene structure and expression of a tobacco endochitinase gene in suspension-cultured tobacco cells. Plant Mol Biol. 1991 Jan;16(1):1–10. doi: 10.1007/BF00017912. [DOI] [PubMed] [Google Scholar]
- Hamilton A. J., Bouzayen M., Grierson D. Identification of a tomato gene for the ethylene-forming enzyme by expression in yeast. Proc Natl Acad Sci U S A. 1991 Aug 15;88(16):7434–7437. doi: 10.1073/pnas.88.16.7434. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hart C. M., Nagy F., Meins F., Jr A 61 bp enhancer element of the tobacco beta-1,3-glucanase B gene interacts with one or more regulated nuclear proteins. Plant Mol Biol. 1993 Jan;21(1):121–131. doi: 10.1007/BF00039623. [DOI] [PubMed] [Google Scholar]
- Hunter T., Karin M. The regulation of transcription by phosphorylation. Cell. 1992 Aug 7;70(3):375–387. doi: 10.1016/0092-8674(92)90162-6. [DOI] [PubMed] [Google Scholar]
- Izawa T., Foster R., Chua N. H. Plant bZIP protein DNA binding specificity. J Mol Biol. 1993 Apr 20;230(4):1131–1144. doi: 10.1006/jmbi.1993.1230. [DOI] [PubMed] [Google Scholar]
- Jefferson R. A., Kavanagh T. A., Bevan M. W. GUS fusions: beta-glucuronidase as a sensitive and versatile gene fusion marker in higher plants. EMBO J. 1987 Dec 20;6(13):3901–3907. doi: 10.1002/j.1460-2075.1987.tb02730.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kieber J. J., Rothenberg M., Roman G., Feldmann K. A., Ecker J. R. CTR1, a negative regulator of the ethylene response pathway in Arabidopsis, encodes a member of the raf family of protein kinases. Cell. 1993 Feb 12;72(3):427–441. doi: 10.1016/0092-8674(93)90119-b. [DOI] [PubMed] [Google Scholar]
- Lawton K. A., Potter S. L., Uknes S., Ryals J. Acquired Resistance Signal Transduction in Arabidopsis Is Ethylene Independent. Plant Cell. 1994 May;6(5):581–588. doi: 10.1105/tpc.6.5.581. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Maeda T., Wurgler-Murphy S. M., Saito H. A two-component system that regulates an osmosensing MAP kinase cascade in yeast. Nature. 1994 May 19;369(6477):242–245. doi: 10.1038/369242a0. [DOI] [PubMed] [Google Scholar]
- Meller Y., Sessa G., Eyal Y., Fluhr R. DNA-protein interactions on a cis-DNA element essential for ethylene regulation. Plant Mol Biol. 1993 Nov;23(3):453–463. doi: 10.1007/BF00019294. [DOI] [PubMed] [Google Scholar]
- Neale A. D., Wahleithner J. A., Lund M., Bonnett H. T., Kelly A., Meeks-Wagner D. R., Peacock W. J., Dennis E. S. Chitinase, beta-1,3-glucanase, osmotin, and extensin are expressed in tobacco explants during flower formation. Plant Cell. 1990 Jul;2(7):673–684. doi: 10.1105/tpc.2.7.673. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ohme-Takagi M., Shinshi H. Structure and expression of a tobacco beta-1,3-glucanase gene. Plant Mol Biol. 1990 Dec;15(6):941–946. doi: 10.1007/BF00039434. [DOI] [PubMed] [Google Scholar]
- Ota I. M., Varshavsky A. A yeast protein similar to bacterial two-component regulators. Science. 1993 Oct 22;262(5133):566–569. doi: 10.1126/science.8211183. [DOI] [PubMed] [Google Scholar]
- Perrey R., Warskulat U., Wink M. Molecular cloning of a lupin-specific gene from a cDNA library of suspension-cultured cells of Lupinus polyphyllus. Plant Mol Biol. 1990 Jul;15(1):175–176. doi: 10.1007/BF00017739. [DOI] [PubMed] [Google Scholar]
- Raghothama K. G., Lawton K. A., Goldsbrough P. B., Woodson W. R. Characterization of an ethylene-regulated flower senescence-related gene from carnation. Plant Mol Biol. 1991 Jul;17(1):61–71. doi: 10.1007/BF00036806. [DOI] [PubMed] [Google Scholar]
- Raz V., Fluhr R. Ethylene Signal Is Transduced via Protein Phosphorylation Events in Plants. Plant Cell. 1993 May;5(5):523–530. doi: 10.1105/tpc.5.5.523. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Sato T., Theologis A. Cloning the mRNA encoding 1-aminocyclopropane-1-carboxylate synthase, the key enzyme for ethylene biosynthesis in plants. Proc Natl Acad Sci U S A. 1989 Sep;86(17):6621–6625. doi: 10.1073/pnas.86.17.6621. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Scharf K. D., Rose S., Zott W., Schöffl F., Nover L., Schöff F. Three tomato genes code for heat stress transcription factors with a region of remarkable homology to the DNA-binding domain of the yeast HSF. EMBO J. 1990 Dec;9(13):4495–4501. doi: 10.1002/j.1460-2075.1990.tb07900.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Serfling E. Autoregulation--a common property of eukaryotic transcription factors? Trends Genet. 1989 May;5(5):131–133. doi: 10.1016/0168-9525(89)90049-8. [DOI] [PubMed] [Google Scholar]
- Shinshi H., Mohnen D., Meins F. Regulation of a plant pathogenesis-related enzyme: Inhibition of chitinase and chitinase mRNA accumulation in cultured tobacco tissues by auxin and cytokinin. Proc Natl Acad Sci U S A. 1987 Jan;84(1):89–93. doi: 10.1073/pnas.84.1.89. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Shinshi H., Neuhas J. M., Ryals J., Meins F., Jr Structure of a tobacco endochitinase gene: evidence that different chitinase genes can arise by transposition of sequences encoding a cysteine-rich domain. Plant Mol Biol. 1990 Mar;14(3):357–368. doi: 10.1007/BF00028772. [DOI] [PubMed] [Google Scholar]
- Shinshi H., Wenzler H., Neuhaus J. M., Felix G., Hofsteenge J., Meins F. Evidence for N- and C-terminal processing of a plant defense-related enzyme: Primary structure of tobacco prepro-beta-1,3-glucanase. Proc Natl Acad Sci U S A. 1988 Aug;85(15):5541–5545. doi: 10.1073/pnas.85.15.5541. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Singh H., LeBowitz J. H., Baldwin A. S., Jr, Sharp P. A. Molecular cloning of an enhancer binding protein: isolation by screening of an expression library with a recognition site DNA. Cell. 1988 Feb 12;52(3):415–423. doi: 10.1016/s0092-8674(88)80034-5. [DOI] [PubMed] [Google Scholar]
- Spanu P., Reinhardt D., Boller T. Analysis and cloning of the ethylene-forming enzyme from tomato by functional expression of its mRNA in Xenopus laevis oocytes. EMBO J. 1991 Aug;10(8):2007–2013. doi: 10.1002/j.1460-2075.1991.tb07730.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Van der Straeten D., Van Wiemeersch L., Goodman H. M., Van Montagu M. Cloning and sequence of two different cDNAs encoding 1-aminocyclopropane-1-carboxylate synthase in tomato. Proc Natl Acad Sci U S A. 1990 Jun;87(12):4859–4863. doi: 10.1073/pnas.87.12.4859. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Vinson C. R., LaMarco K. L., Johnson P. F., Landschulz W. H., McKnight S. L. In situ detection of sequence-specific DNA binding activity specified by a recombinant bacteriophage. Genes Dev. 1988 Jul;2(7):801–806. doi: 10.1101/gad.2.7.801. [DOI] [PubMed] [Google Scholar]
- Vögeli-Lange R., Fründt C., Hart C. M., Nagy F., Meins F., Jr Developmental, hormonal, and pathogenesis-related regulation of the tobacco class I beta-1,3-glucanase B promoter. Plant Mol Biol. 1994 May;25(2):299–311. doi: 10.1007/BF00023245. [DOI] [PubMed] [Google Scholar]
- Yang S. F. Ethylene evolution from 2-chloroethylphosphonic Acid. Plant Physiol. 1969 Aug;44(8):1203–1204. doi: 10.1104/pp.44.8.1203. [DOI] [PMC free article] [PubMed] [Google Scholar]