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. 1995 Nov;7(11):1749–1761. doi: 10.1105/tpc.7.11.1749

Light control of seedling morphogenetic pattern.

T W McNellis 1, X W Deng 1
PMCID: PMC161035  PMID: 8535132

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Selected References

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  1. Ahmad M., Cashmore A. R. HY4 gene of A. thaliana encodes a protein with characteristics of a blue-light photoreceptor. Nature. 1993 Nov 11;366(6451):162–166. doi: 10.1038/366162a0. [DOI] [PubMed] [Google Scholar]
  2. Ang L. H., Deng X. W. Regulatory hierarchy of photomorphogenic loci: allele-specific and light-dependent interaction between the HY5 and COP1 loci. Plant Cell. 1994 May;6(5):613–628. doi: 10.1105/tpc.6.5.613. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. Ballaré C. L., Scopel A. L., Sánchez R. A. Far-red radiation reflected from adjacent leaves: an early signal of competition in plant canopies. Science. 1990 Jan 19;247(4940):329–332. doi: 10.1126/science.247.4940.329. [DOI] [PubMed] [Google Scholar]
  4. Beggs C. J., Holmes M. G., Jabben M., Schäfer E. Action Spectra for the Inhibition of Hypocotyl Growth by Continuous Irradiation in Light and Dark-Grown Sinapis alba L. Seedlings. Plant Physiol. 1980 Oct;66(4):615–618. doi: 10.1104/pp.66.4.615. [DOI] [PMC free article] [PubMed] [Google Scholar]
  5. Blum D. E., Neff M. M., Van Volkenburgh E. Light-stimulated cotyledon expansion in the blu3 and hy4 mutants of Arabidopsis thaliana. Plant Physiol. 1994 Aug;105(4):1433–1436. doi: 10.1104/pp.105.4.1433. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. Bowler C., Chua N. H. Emerging themes of plant signal transduction. Plant Cell. 1994 Nov;6(11):1529–1541. doi: 10.1105/tpc.6.11.1529. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Bowler C., Neuhaus G., Yamagata H., Chua N. H. Cyclic GMP and calcium mediate phytochrome phototransduction. Cell. 1994 Apr 8;77(1):73–81. doi: 10.1016/0092-8674(94)90236-4. [DOI] [PubMed] [Google Scholar]
  8. Boylan M. T., Quail P. H. Oat Phytochrome Is Biologically Active in Transgenic Tomatoes. Plant Cell. 1989 Aug;1(8):765–773. doi: 10.1105/tpc.1.8.765. [DOI] [PMC free article] [PubMed] [Google Scholar]
  9. Boylan M. T., Quail P. H. Phytochrome a overexpression inhibits hypocotyl elongation in transgenic Arabidopsis. Proc Natl Acad Sci U S A. 1991 Dec 1;88(23):10806–10810. doi: 10.1073/pnas.88.23.10806. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Carabelli M., Sessa G., Baima S., Morelli G., Ruberti I. The Arabidopsis Athb-2 and -4 genes are strongly induced by far-red-rich light. Plant J. 1993 Sep;4(3):469–479. doi: 10.1046/j.1365-313x.1993.04030469.x. [DOI] [PubMed] [Google Scholar]
  11. Chamovitz D. A., Deng X. W. The novel components of the Arabidopsis light signaling pathway may define a group of general developmental regulators shared by both animal and plant kingdoms. Cell. 1995 Aug 11;82(3):353–354. doi: 10.1016/0092-8674(95)90423-9. [DOI] [PubMed] [Google Scholar]
  12. Chory J., Nagpal P., Peto C. A. Phenotypic and Genetic Analysis of det2, a New Mutant That Affects Light-Regulated Seedling Development in Arabidopsis. Plant Cell. 1991 May;3(5):445–459. doi: 10.1105/tpc.3.5.445. [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. Chory J. Out of darkness: mutants reveal pathways controlling light-regulated development in plants. Trends Genet. 1993 May;9(5):167–172. doi: 10.1016/0168-9525(93)90163-c. [DOI] [PubMed] [Google Scholar]
  14. Chory J., Peto C., Feinbaum R., Pratt L., Ausubel F. Arabidopsis thaliana mutant that develops as a light-grown plant in the absence of light. Cell. 1989 Sep 8;58(5):991–999. doi: 10.1016/0092-8674(89)90950-1. [DOI] [PubMed] [Google Scholar]
  15. Chory J., Reinecke D., Sim S., Washburn T., Brenner M. A Role for Cytokinins in De-Etiolation in Arabidopsis (det Mutants Have an Altered Response to Cytokinins). Plant Physiol. 1994 Feb;104(2):339–347. doi: 10.1104/pp.104.2.339. [DOI] [PMC free article] [PubMed] [Google Scholar]
  16. Clack T., Mathews S., Sharrock R. A. The phytochrome apoprotein family in Arabidopsis is encoded by five genes: the sequences and expression of PHYD and PHYE. Plant Mol Biol. 1994 Jun;25(3):413–427. doi: 10.1007/BF00043870. [DOI] [PubMed] [Google Scholar]
  17. Deng X. W., Caspar T., Quail P. H. cop1: a regulatory locus involved in light-controlled development and gene expression in Arabidopsis. Genes Dev. 1991 Jul;5(7):1172–1182. doi: 10.1101/gad.5.7.1172. [DOI] [PubMed] [Google Scholar]
  18. Deng X. W. Fresh view of light signal transduction in plants. Cell. 1994 Feb 11;76(3):423–426. doi: 10.1016/0092-8674(94)90107-4. [DOI] [PubMed] [Google Scholar]
  19. Deng X. W., Matsui M., Wei N., Wagner D., Chu A. M., Feldmann K. A., Quail P. H. COP1, an Arabidopsis regulatory gene, encodes a protein with both a zinc-binding motif and a G beta homologous domain. Cell. 1992 Nov 27;71(5):791–801. doi: 10.1016/0092-8674(92)90555-q. [DOI] [PubMed] [Google Scholar]
  20. Dev BN. Comment on "Quantitative structural determination of metallic film growth on a semiconductor crystal: ( sqrt 3 x sqrt 3 )R30 degrees -->(1 x 1) Pb on Ge(111)". Phys Rev Lett. 1990 Mar 5;64(10):1182–1182. doi: 10.1103/PhysRevLett.64.1182. [DOI] [PubMed] [Google Scholar]
  21. Dynlacht B. D., Weinzierl R. O., Admon A., Tjian R. The dTAFII80 subunit of Drosophila TFIID contains beta-transducin repeats. Nature. 1993 May 13;363(6425):176–179. doi: 10.1038/363176a0. [DOI] [PubMed] [Google Scholar]
  22. Hou Y., Von Arnim A. G., Deng X. W. A New Class of Arabidopsis Constitutive Photomorphogenic Genes Involved in Regulating Cotyledon Development. Plant Cell. 1993 Mar;5(3):329–339. doi: 10.1105/tpc.5.3.329. [DOI] [PMC free article] [PubMed] [Google Scholar]
  23. Johnson E., Bradley M., Harberd N. P., Whitelam G. C. Photoresponses of Light-Grown phyA Mutants of Arabidopsis (Phytochrome A Is Required for the Perception of Daylength Extensions). Plant Physiol. 1994 May;105(1):141–149. doi: 10.1104/pp.105.1.141. [DOI] [PMC free article] [PubMed] [Google Scholar]
  24. Kaufman L. S. Transduction of Blue-Light Signals. Plant Physiol. 1993 Jun;102(2):333–337. doi: 10.1104/pp.102.2.333. [DOI] [PMC free article] [PubMed] [Google Scholar]
  25. Kloppstech K., Otto B., Sierralta W. Cyclic temperature treatments of dark-grown pea seedlings induce a rise in specific transcript levels of light-regulated genes related to photomorphogenesis. Mol Gen Genet. 1991 Mar;225(3):468–473. doi: 10.1007/BF00261689. [DOI] [PubMed] [Google Scholar]
  26. Lin C., Ahmad M., Gordon D., Cashmore A. R. Expression of an Arabidopsis cryptochrome gene in transgenic tobacco results in hypersensitivity to blue, UV-A, and green light. Proc Natl Acad Sci U S A. 1995 Aug 29;92(18):8423–8427. doi: 10.1073/pnas.92.18.8423. [DOI] [PMC free article] [PubMed] [Google Scholar]
  27. Lin C., Robertson D. E., Ahmad M., Raibekas A. A., Jorns M. S., Dutton P. L., Cashmore A. R. Association of flavin adenine dinucleotide with the Arabidopsis blue light receptor CRY1. Science. 1995 Aug 18;269(5226):968–970. doi: 10.1126/science.7638620. [DOI] [PubMed] [Google Scholar]
  28. Liscum E., Briggs W. R. Mutations in the NPH1 locus of Arabidopsis disrupt the perception of phototropic stimuli. Plant Cell. 1995 Apr;7(4):473–485. doi: 10.1105/tpc.7.4.473. [DOI] [PMC free article] [PubMed] [Google Scholar]
  29. Liscum E., Young J. C., Poff K. L., Hangarter R. P. Genetic separation of phototropism and blue light inhibition of stem elongation. Plant Physiol. 1992 Sep;100(1):267–271. doi: 10.1104/pp.100.1.267. [DOI] [PMC free article] [PubMed] [Google Scholar]
  30. López-Juez E., Nagatani A., Tomizawa K., Deak M., Kern R., Kendrick R. E., Furuya M. The cucumber long hypocotyl mutant lacks a light-stable PHYB-like phytochrome. Plant Cell. 1992 Mar;4(3):241–251. [PMC free article] [PubMed] [Google Scholar]
  31. McNellis T. W., von Arnim A. G., Araki T., Komeda Y., Miséra S., Deng X. W. Genetic and molecular analysis of an allelic series of cop1 mutants suggests functional roles for the multiple protein domains. Plant Cell. 1994 Apr;6(4):487–500. doi: 10.1105/tpc.6.4.487. [DOI] [PMC free article] [PubMed] [Google Scholar]
  32. McNellis T. W., von Arnim A. G., Deng X. W. Overexpression of Arabidopsis COP1 results in partial suppression of light-mediated development: evidence for a light-inactivable repressor of photomorphogenesis. Plant Cell. 1994 Oct;6(10):1391–1400. doi: 10.1105/tpc.6.10.1391. [DOI] [PMC free article] [PubMed] [Google Scholar]
  33. Millar A. J., McGrath R. B., Chua N. H. Phytochrome phototransduction pathways. Annu Rev Genet. 1994;28:325–349. doi: 10.1146/annurev.ge.28.120194.001545. [DOI] [PubMed] [Google Scholar]
  34. Miséra S., Müller A. J., Weiland-Heidecker U., Jürgens G. The FUSCA genes of Arabidopsis: negative regulators of light responses. Mol Gen Genet. 1994 Aug 2;244(3):242–252. doi: 10.1007/BF00285451. [DOI] [PubMed] [Google Scholar]
  35. Nagatani A., Kay S. A., Deak M., Chua N. H., Furuya M. Rice type I phytochrome regulates hypocotyl elongation in transgenic tobacco seedlings. Proc Natl Acad Sci U S A. 1991 Jun 15;88(12):5207–5211. doi: 10.1073/pnas.88.12.5207. [DOI] [PMC free article] [PubMed] [Google Scholar]
  36. Nagatani A., Reed J. W., Chory J. Isolation and Initial Characterization of Arabidopsis Mutants That Are Deficient in Phytochrome A. Plant Physiol. 1993 May;102(1):269–277. doi: 10.1104/pp.102.1.269. [DOI] [PMC free article] [PubMed] [Google Scholar]
  37. Neuhaus G., Bowler C., Kern R., Chua N. H. Calcium/calmodulin-dependent and -independent phytochrome signal transduction pathways. Cell. 1993 Jun 4;73(5):937–952. doi: 10.1016/0092-8674(93)90272-r. [DOI] [PubMed] [Google Scholar]
  38. Parks B. M., Quail P. H. hy8, a new class of arabidopsis long hypocotyl mutants deficient in functional phytochrome A. Plant Cell. 1993 Jan;5(1):39–48. doi: 10.1105/tpc.5.1.39. [DOI] [PMC free article] [PubMed] [Google Scholar]
  39. Pepper A., Delaney T., Washburn T., Poole D., Chory J. DET1, a negative regulator of light-mediated development and gene expression in arabidopsis, encodes a novel nuclear-localized protein. Cell. 1994 Jul 15;78(1):109–116. doi: 10.1016/0092-8674(94)90577-0. [DOI] [PubMed] [Google Scholar]
  40. Quaedvlieg N., Dockx J., Rook F., Weisbeek P., Smeekens S. The homeobox gene ATH1 of Arabidopsis is derepressed in the photomorphogenic mutants cop1 and det1. Plant Cell. 1995 Jan;7(1):117–129. doi: 10.1105/tpc.7.1.117. [DOI] [PMC free article] [PubMed] [Google Scholar]
  41. Quail P. H., Boylan M. T., Parks B. M., Short T. W., Xu Y., Wagner D. Phytochromes: photosensory perception and signal transduction. Science. 1995 May 5;268(5211):675–680. doi: 10.1126/science.7732376. [DOI] [PubMed] [Google Scholar]
  42. Reed J. W., Nagatani A., Elich T. D., Fagan M., Chory J. Phytochrome A and Phytochrome B Have Overlapping but Distinct Functions in Arabidopsis Development. Plant Physiol. 1994 Apr;104(4):1139–1149. doi: 10.1104/pp.104.4.1139. [DOI] [PMC free article] [PubMed] [Google Scholar]
  43. Reed J. W., Nagpal P., Poole D. S., Furuya M., Chory J. Mutations in the gene for the red/far-red light receptor phytochrome B alter cell elongation and physiological responses throughout Arabidopsis development. Plant Cell. 1993 Feb;5(2):147–157. doi: 10.1105/tpc.5.2.147. [DOI] [PMC free article] [PubMed] [Google Scholar]
  44. Somers D. E., Sharrock R. A., Tepperman J. M., Quail P. H. The hy3 Long Hypocotyl Mutant of Arabidopsis Is Deficient in Phytochrome B. Plant Cell. 1991 Dec;3(12):1263–1274. doi: 10.1105/tpc.3.12.1263. [DOI] [PMC free article] [PubMed] [Google Scholar]
  45. Vierstra R. D. Illuminating Phytochrome Functions (There Is Light at the End of the Tunnel). Plant Physiol. 1993 Nov;103(3):679–684. doi: 10.1104/pp.103.3.679. [DOI] [PMC free article] [PubMed] [Google Scholar]
  46. Wagner D., Tepperman J. M., Quail P. H. Overexpression of Phytochrome B Induces a Short Hypocotyl Phenotype in Transgenic Arabidopsis. Plant Cell. 1991 Dec;3(12):1275–1288. doi: 10.1105/tpc.3.12.1275. [DOI] [PMC free article] [PubMed] [Google Scholar]
  47. Warpeha K. M., Hamm H. E., Rasenick M. M., Kaufman L. S. A blue-light-activated GTP-binding protein in the plasma membranes of etiolated peas. Proc Natl Acad Sci U S A. 1991 Oct 15;88(20):8925–8929. doi: 10.1073/pnas.88.20.8925. [DOI] [PMC free article] [PubMed] [Google Scholar]
  48. Wei N., Deng X. W. COP9: a new genetic locus involved in light-regulated development and gene expression in arabidopsis. Plant Cell. 1992 Dec;4(12):1507–1518. doi: 10.1105/tpc.4.12.1507. [DOI] [PMC free article] [PubMed] [Google Scholar]
  49. Wei N., Kwok S. F., von Arnim A. G., Lee A., McNellis T. W., Piekos B., Deng X. W. Arabidopsis COP8, COP10, and COP11 genes are involved in repression of photomorphogenic development in darkness. Plant Cell. 1994 May;6(5):629–643. doi: 10.1105/tpc.6.5.629. [DOI] [PMC free article] [PubMed] [Google Scholar]
  50. Whitelam G. C., Johnson E., Peng J., Carol P., Anderson M. L., Cowl J. S., Harberd N. P. Phytochrome A null mutants of Arabidopsis display a wild-type phenotype in white light. Plant Cell. 1993 Jul;5(7):757–768. doi: 10.1105/tpc.5.7.757. [DOI] [PMC free article] [PubMed] [Google Scholar]
  51. von Arnim A. G., Deng X. W. Light inactivation of Arabidopsis photomorphogenic repressor COP1 involves a cell-specific regulation of its nucleocytoplasmic partitioning. Cell. 1994 Dec 16;79(6):1035–1045. doi: 10.1016/0092-8674(94)90034-5. [DOI] [PubMed] [Google Scholar]

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