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. 1996 Apr;40(4):924–929. doi: 10.1128/aac.40.4.924

Characterization of IS1272, an insertion sequence-like element from Staphylococcus haemolyticus.

G L Archer 1, J A Thanassi 1, D M Niemeyer 1, M J Pucci 1
PMCID: PMC163232  PMID: 8849253

Abstract

We have previously shown (G. L. Archer, D. M. Niemeyer, J. A. Thanassi, and M. J. Pucci, Antimicrob. Agents Chemother. 38:447-454, 1994) that some methicillin-resistant staphylococcal isolates contain a partial deletion of the genes (mecR1 and mecI) that regulate the transcription of the methicillin resistance structural gene (mecA). When a fragment of DNA inserted at the point of the mecR1 deletion was used as a probe, hybridization with multiple bands was detected for Staphylococcus haemolyticus genomic DNA. In the present study, DNA sequencing of four unique clones recovered from a lambda library of S. haemolyticus revealed identical 1,934-bp elements. Each element, designated IS1272, contained 16-bp terminal inverted repeats (sequence identity, 15 of 16 bp) and two open reading frames of 819 and 687 bp; there were no flanking target site duplications. Database searches yielded amino acid homology with proteins predicted to be encoded by open reading frames from a putative insertion sequence element from Enterococcus hirae. DNA probes from each end and the middle of IS1272 were hybridized with restriction endonuclease-digested genomic DNA from clinical S. haemolyticus, Staphylococcus epidermidis, and Staphylococcus aureus isolates. Each of the 20 or more copies of the element found in S. haemolyticus isolates was intact, and copies were found in most chromosomal SmaI fragments. S. aureus and S. epidermidis isolates contained mostly incomplete fragments of the element, and there were many more hybridizing fragments in methicillin-resistant than in methicillin-susceptible isolates. IS1272, which appears to be primarily resident in S. haemolyticus, has disseminated to multiple staphylococcal species and is prevalent in multiresistant isolates.

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Selected References

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  1. Archer G. L., Niemeyer D. M., Thanassi J. A., Pucci M. J. Dissemination among staphylococci of DNA sequences associated with methicillin resistance. Antimicrob Agents Chemother. 1994 Mar;38(3):447–454. doi: 10.1128/aac.38.3.447. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. Bannerman T. L., Hancock G. A., Tenover F. C., Miller J. M. Pulsed-field gel electrophoresis as a replacement for bacteriophage typing of Staphylococcus aureus. J Clin Microbiol. 1995 Mar;33(3):551–555. doi: 10.1128/jcm.33.3.551-555.1995. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. Barberis-Maino L., Berger-Bächi B., Weber H., Beck W. D., Kayser F. H. IS431, a staphylococcal insertion sequence-like element related to IS26 from Proteus vulgaris. Gene. 1987;59(1):107–113. doi: 10.1016/0378-1119(87)90271-x. [DOI] [PubMed] [Google Scholar]
  4. Brockbank S. M., Barth P. T. Cloning, sequencing, and expression of the DNA gyrase genes from Staphylococcus aureus. J Bacteriol. 1993 Jun;175(11):3269–3277. doi: 10.1128/jb.175.11.3269-3277.1993. [DOI] [PMC free article] [PubMed] [Google Scholar]
  5. Byrne M. E., Gillespie M. T., Skurray R. A. 4',4'' adenyltransferase activity on conjugative plasmids isolated from Staphylococcus aureus is encoded on an integrated copy of pUB110. Plasmid. 1991 Jan;25(1):70–75. doi: 10.1016/0147-619x(91)90008-k. [DOI] [PubMed] [Google Scholar]
  6. Byrne M. E., Gillespie M. T., Skurray R. A. Molecular analysis of a gentamicin resistance transposonlike element on plasmids isolated from North American Staphylococcus aureus strains. Antimicrob Agents Chemother. 1990 Nov;34(11):2106–2113. doi: 10.1128/aac.34.11.2106. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Byrne M. E., Rouch D. A., Skurray R. A. Nucleotide sequence analysis of IS256 from the Staphylococcus aureus gentamicin-tobramycin-kanamycin-resistance transposon Tn4001. Gene. 1989 Sep 30;81(2):361–367. doi: 10.1016/0378-1119(89)90197-2. [DOI] [PubMed] [Google Scholar]
  8. Dale G. E., Broger C., Hartman P. G., Langen H., Page M. G., Then R. L., Stüber D. Characterization of the gene for the chromosomal dihydrofolate reductase (DHFR) of Staphylococcus epidermidis ATCC 14990: the origin of the trimethoprim-resistant S1 DHFR from Staphylococcus aureus? J Bacteriol. 1995 Jun;177(11):2965–2970. doi: 10.1128/jb.177.11.2965-2970.1995. [DOI] [PMC free article] [PubMed] [Google Scholar]
  9. Derbise A., Dyke K. G., el Solh N. Isolation and characterization of IS1181, an insertion sequence from Staphylococcus aureus. Plasmid. 1994 May;31(3):251–264. doi: 10.1006/plas.1994.1027. [DOI] [PubMed] [Google Scholar]
  10. Dyke K. G., Aubert S., el Solh N. Multiple copies of IS256 in staphylococci. Plasmid. 1992 Nov;28(3):235–246. doi: 10.1016/0147-619x(92)90055-f. [DOI] [PubMed] [Google Scholar]
  11. Froggatt J. W., Johnston J. L., Galetto D. W., Archer G. L. Antimicrobial resistance in nosocomial isolates of Staphylococcus haemolyticus. Antimicrob Agents Chemother. 1989 Apr;33(4):460–466. doi: 10.1128/aac.33.4.460. [DOI] [PMC free article] [PubMed] [Google Scholar]
  12. Hodel-Christian S. L., Murray B. E. Characterization of the gentamicin resistance transposon Tn5281 from Enterococcus faecalis and comparison to staphylococcal transposons Tn4001 and Tn4031. Antimicrob Agents Chemother. 1991 Jun;35(6):1147–1152. doi: 10.1128/aac.35.6.1147. [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. Kreiswirth B., Kornblum J., Arbeit R. D., Eisner W., Maslow J. N., McGeer A., Low D. E., Novick R. P. Evidence for a clonal origin of methicillin resistance in Staphylococcus aureus. Science. 1993 Jan 8;259(5092):227–230. doi: 10.1126/science.8093647. [DOI] [PubMed] [Google Scholar]
  14. Leelaporn A., Firth N., Byrne M. E., Roper E., Skurray R. A. Possible role of insertion sequence IS257 in dissemination and expression of high- and low-level trimethoprim resistance in staphylococci. Antimicrob Agents Chemother. 1994 Oct;38(10):2238–2244. doi: 10.1128/aac.38.10.2238. [DOI] [PMC free article] [PubMed] [Google Scholar]
  15. Lyon B. R., May J. W., Skurray R. A. Tn4001: a gentamicin and kanamycin resistance transposon in Staphylococcus aureus. Mol Gen Genet. 1984;193(3):554–556. doi: 10.1007/BF00382099. [DOI] [PubMed] [Google Scholar]
  16. Lyon B. R., Skurray R. Antimicrobial resistance of Staphylococcus aureus: genetic basis. Microbiol Rev. 1987 Mar;51(1):88–134. doi: 10.1128/mr.51.1.88-134.1987. [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. Monzon-Moreno C., Aubert S., Morvan A., Solh N. E. Usefulness of three probes in typing isolates of methicillin-resistant Staphylococcus aureus (MRSA). J Med Microbiol. 1991 Aug;35(2):80–88. doi: 10.1099/00222615-35-2-80. [DOI] [PubMed] [Google Scholar]
  18. Morton T. M., Eaton D. M., Johnston J. L., Archer G. L. DNA sequence and units of transcription of the conjugative transfer gene complex (trs) of Staphylococcus aureus plasmid pGO1. J Bacteriol. 1993 Jul;175(14):4436–4447. doi: 10.1128/jb.175.14.4436-4447.1993. [DOI] [PMC free article] [PubMed] [Google Scholar]
  19. Morton T. M., Johnston J. L., Patterson J., Archer G. L. Characterization of a conjugative staphylococcal mupirocin resistance plasmid. Antimicrob Agents Chemother. 1995 Jun;39(6):1272–1280. doi: 10.1128/aac.39.6.1272. [DOI] [PMC free article] [PubMed] [Google Scholar]
  20. Murray B. E., Mederski-Samoraj B., Foster S. K., Brunton J. L., Harford P. In vitro studies of plasmid-mediated penicillinase from Streptococcus faecalis suggest a staphylococcal origin. J Clin Invest. 1986 Jan;77(1):289–293. doi: 10.1172/JCI112289. [DOI] [PMC free article] [PubMed] [Google Scholar]
  21. Piras G., Raze D., el Kharroubi A., Hastir D., Englebert S., Coyette J., Ghuysen J. M. Cloning and sequencing of the low-affinity penicillin-binding protein 3r-encoding gene of Enterococcus hirae S185: modular design and structural organization of the protein. J Bacteriol. 1993 May;175(10):2844–2852. doi: 10.1128/jb.175.10.2844-2852.1993. [DOI] [PMC free article] [PubMed] [Google Scholar]
  22. Rice L. B., Carias L. L., Marshall S. H. Tn5384, a composite enterococcal mobile element conferring resistance to erythromycin and gentamicin whose ends are directly repeated copies of IS256. Antimicrob Agents Chemother. 1995 May;39(5):1147–1153. doi: 10.1128/aac.39.5.1147. [DOI] [PMC free article] [PubMed] [Google Scholar]
  23. Rice L. B., Thorisdottir A. S. The prevalence of sequences homologous to IS256 in clinical enterococcal isolates. Plasmid. 1994 Nov;32(3):344–349. doi: 10.1006/plas.1994.1076. [DOI] [PubMed] [Google Scholar]
  24. Rouch D. A., Messerotti L. J., Loo L. S., Jackson C. A., Skurray R. A. Trimethoprim resistance transposon Tn4003 from Staphylococcus aureus encodes genes for a dihydrofolate reductase and thymidylate synthetase flanked by three copies of IS257. Mol Microbiol. 1989 Feb;3(2):161–175. doi: 10.1111/j.1365-2958.1989.tb01805.x. [DOI] [PubMed] [Google Scholar]
  25. Stewart P. R., Dubin D. T., Chikramane S. G., Inglis B., Matthews P. R., Poston S. M. IS257 and small plasmid insertions in the mec region of the chromosome of Staphylococcus aureus. Plasmid. 1994 Jan;31(1):12–20. doi: 10.1006/plas.1994.1002. [DOI] [PubMed] [Google Scholar]
  26. Thomas W. D., Jr, Archer G. L. Mobility of gentamicin resistance genes from staphylococci isolated in the United States: identification of Tn4031, a gentamicin resistance transposon from Staphylococcus epidermidis. Antimicrob Agents Chemother. 1989 Aug;33(8):1335–1341. doi: 10.1128/aac.33.8.1335. [DOI] [PMC free article] [PubMed] [Google Scholar]
  27. Walcher-Salesse S., Monzon-Moreno C., Aubert S., el Solh N. An epidemiological assessment of coagulase-negative staphylococci from an intensive care unit. J Med Microbiol. 1992 May;36(5):321–331. doi: 10.1099/00222615-36-5-321. [DOI] [PubMed] [Google Scholar]
  28. Weisblum B., Holder S. B., Halling S. M. Deoxyribonucleic acid sequence common to staphylococcal and streptococcal plasmids which specify erythromycin resistance. J Bacteriol. 1979 Jun;138(3):990–998. doi: 10.1128/jb.138.3.990-998.1979. [DOI] [PMC free article] [PubMed] [Google Scholar]
  29. Yanisch-Perron C., Vieira J., Messing J. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene. 1985;33(1):103–119. doi: 10.1016/0378-1119(85)90120-9. [DOI] [PubMed] [Google Scholar]
  30. Zhao X. J., Wu H. C. Nucleotide sequence of the Staphylococcus aureus signal peptidase II (lsp) gene. FEBS Lett. 1992 Mar 24;299(1):80–84. doi: 10.1016/0014-5793(92)80105-p. [DOI] [PubMed] [Google Scholar]
  31. el Kharroubi A., Jacques P., Piras G., Van Beeumen J., Coyette J., Ghuysen J. M. The Enterococcus hirae R40 penicillin-binding protein 5 and the methicillin-resistant Staphylococcus aureus penicillin-binding protein 2' are similar. Biochem J. 1991 Dec 1;280(Pt 2):463–469. [PMC free article] [PubMed] [Google Scholar]

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