Abstract
Recently, we have shown differential splicing of an intron in the cbhI.2 gene of Phanerochaete chrysosporium ME446; this intron lies within the region of the gene encoding the cellulose binding domain (P.F.G. Sims, M. S. Soares-Felipe, Q. Wang, M.E. Gent, C. Tempelaars, and P. Broda, Mol. Microbiol. 12:209-216, 1994). Here, we show that such differential splicing occurs in the cbhI.1 gene of this fungus as well as in the cbhI.2 gene and that this phenomenon is substrate dependent. Avicel elicits the synthesis of both classes of mRNA transcripts from both of these genes. In contrast, carboxymethyl cellulose predominantly elicits the synthesis of fully spliced transcripts from both genes. Such differential splicing might allow this fungus to regulate the specificities of substrate binding for these cellulases.
Full Text
The Full Text of this article is available as a PDF (310.4 KB).
Selected References
These references are in PubMed. This may not be the complete list of references from this article.
- Boel E., Hansen M. T., Hjort I., Høegh I., Fiil N. P. Two different types of intervening sequences in the glucoamylase gene from Aspergillus niger. EMBO J. 1984 Jul;3(7):1581–1585. doi: 10.1002/j.1460-2075.1984.tb02014.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Boel E., Hjort I., Svensson B., Norris F., Norris K. E., Fiil N. P. Glucoamylases G1 and G2 from Aspergillus niger are synthesized from two different but closely related mRNAs. EMBO J. 1984 May;3(5):1097–1102. doi: 10.1002/j.1460-2075.1984.tb01935.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Broda P., Birch P. R., Brooks P. R., Sims P. F. PCR-mediated analysis of lignocellulolytic gene transcription by Phanerochaete chrysosporium: substrate-dependent differential expression within gene families. Appl Environ Microbiol. 1995 Jun;61(6):2358–2364. doi: 10.1128/aem.61.6.2358-2364.1995. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Brooks P., Sims P., Broda P. Isozyme specific polymerase chain reaction analysis of differential gene expression: a general method applied to lignin peroxidase genes of Phanerochaete chrysosporium. Biotechnology (N Y) 1993 Jul;11(7):830–834. doi: 10.1038/nbt0793-830. [DOI] [PubMed] [Google Scholar]
- Covert S. F., Bolduc J., Cullen D. Genomic organization of a cellulase gene family in Phanerochaete chrysosporium. Curr Genet. 1992 Nov;22(5):407–413. doi: 10.1007/BF00352442. [DOI] [PubMed] [Google Scholar]
- Covert S. F., Vanden Wymelenberg A., Cullen D. Structure, organization, and transcription of a cellobiohydrolase gene cluster from Phanerochaete chrysosporium. Appl Environ Microbiol. 1992 Jul;58(7):2168–2175. doi: 10.1128/aem.58.7.2168-2175.1992. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Eriksson K. E., Hamp S. G. Regulation of Endo-1,4-beta-glucanase production in Sporotrichum pulverulentum. Eur J Biochem. 1978 Sep 15;90(1):183–190. doi: 10.1111/j.1432-1033.1978.tb12589.x. [DOI] [PubMed] [Google Scholar]
- Eriksson K. E., Pettersson B. Extracellular enzyme system utilized by the fungus Sporotrichum pulverulentum (Chrysosporium lignorum) for the breakdown of cellulose. 1. Separation, purification and physico-chemical characterization of five endo-1,4-beta-glucanases. Eur J Biochem. 1975 Feb 3;51(1):193–206. doi: 10.1111/j.1432-1033.1975.tb03919.x. [DOI] [PubMed] [Google Scholar]
- Gilkes N. R., Henrissat B., Kilburn D. G., Miller R. C., Jr, Warren R. A. Domains in microbial beta-1, 4-glycanases: sequence conservation, function, and enzyme families. Microbiol Rev. 1991 Jun;55(2):303–315. doi: 10.1128/mr.55.2.303-315.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Gold M. H., Alic M. Molecular biology of the lignin-degrading basidiomycete Phanerochaete chrysosporium. Microbiol Rev. 1993 Sep;57(3):605–622. doi: 10.1128/mr.57.3.605-622.1993. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Saloheimo A., Henrissat B., Hoffrén A. M., Teleman O., Penttilä M. A novel, small endoglucanase gene, egl5, from Trichoderma reesei isolated by expression in yeast. Mol Microbiol. 1994 Jul;13(2):219–228. doi: 10.1111/j.1365-2958.1994.tb00417.x. [DOI] [PubMed] [Google Scholar]
- Saloheimo M., Lehtovaara P., Penttilä M., Teeri T. T., Ståhlberg J., Johansson G., Pettersson G., Claeyssens M., Tomme P., Knowles J. K. EGIII, a new endoglucanase from Trichoderma reesei: the characterization of both gene and enzyme. Gene. 1988;63(1):11–22. doi: 10.1016/0378-1119(88)90541-0. [DOI] [PubMed] [Google Scholar]
- Schrank A., Tempelaars C., Sims P. F., Oliver S. G., Broda P. The trpC gene of Phanerochaete chrysosporium is unique in containing an intron but nevertheless maintains the order of functional domains seen in other fungi. Mol Microbiol. 1991 Feb;5(2):467–476. doi: 10.1111/j.1365-2958.1991.tb02130.x. [DOI] [PubMed] [Google Scholar]
- Sims P. F., Soares-Felipe M. S., Wang Q., Gent M. E., Tempelaars C., Broda P. Differential expression of multiple exo-cellobiohydrolase I-like genes in the lignin-degrading fungus Phanerochaete chrysosporium. Mol Microbiol. 1994 Apr;12(2):209–216. doi: 10.1111/j.1365-2958.1994.tb01010.x. [DOI] [PubMed] [Google Scholar]
- Sims P., James C., Broda P. The identification, molecular cloning and characterisation of a gene from Phanerochaete chrysosporium that shows strong homology to the exo-cellobiohydrolase I gene from Trichoderma reesei. Gene. 1988 Dec 30;74(2):411–422. doi: 10.1016/0378-1119(88)90174-6. [DOI] [PubMed] [Google Scholar]
- Ståhlberg J., Johansson G., Pettersson G. Trichoderma reesei has no true exo-cellulase: all intact and truncated cellulases produce new reducing end groups on cellulose. Biochim Biophys Acta. 1993 May 7;1157(1):107–113. doi: 10.1016/0304-4165(93)90085-m. [DOI] [PubMed] [Google Scholar]
- Tempelaars C. A., Birch P. R., Sims P. F., Broda P. Isolation, characterization, and analysis of the expression of the cbhII gene of Phanerochaete chrysosporium. Appl Environ Microbiol. 1994 Dec;60(12):4387–4393. doi: 10.1128/aem.60.12.4387-4393.1994. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Uzcategui E., Ruiz A., Montesino R., Johansson G., Pettersson G. The 1,4-beta-D-glucan cellobiohydrolases from Phanerochaete chrysosporium. I. A system of synergistically acting enzymes homologous to Trichoderma reesei. J Biotechnol. 1991 Jul;19(2-3):271–285. doi: 10.1016/0168-1656(91)90064-3. [DOI] [PubMed] [Google Scholar]
- Vanden Wymelenberg A., Covert S., Cullen D. Identification of the gene encoding the major cellobiohydrolase of the white rot fungus Phanerochaete chrysosporium. Appl Environ Microbiol. 1993 Oct;59(10):3492–3494. doi: 10.1128/aem.59.10.3492-3494.1993. [DOI] [PMC free article] [PubMed] [Google Scholar]