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American Journal of Human Genetics logoLink to American Journal of Human Genetics
. 1993 Jun;52(6):1074–1084.

Molecular genetic and genetic correlations in sodium channelopathies: Lack of founder effect and evidence for a second gene

J Wang, J Zhou, S M Todorovic, W G Feero, F Barany, R Conwit, I Hausmanowa-Petrusewicz, A Fidzianska, K Arahata, H B Wessel, A Sillen, H G Marks, P Hartlage, G Galloway, K Ricker, F Lehmann-Horn, H Hayakawa, E P Hoffman
PMCID: PMC1682261  PMID: 8389097

Abstract

We present a correlation of molecular genetic data (mutations) and genetic data (dinucleotide-repeat polymorphisms) for a cohort of seven hyperkalemic periodic paralysis (HyperPP) and two paramyotonia congenita (PC) families from diverse ethnic backgrounds. We found that each of three previously identified point mutations of the adult skeletal muscle sodium-channel gene occurred on two different dinucleotide-repeat haplotypes. These results indicate that dinucleotide-repeat haplotypes are not predictive of allelic heterogeneity in sodium channelopathies, contrary to previous suggestions. In addition, we identified a HyperPP pedigree in which the dominant disorder was not linked to the sodium-channel gene. Thus, a second locus can give rise to a similar clinical phenotype. Some individuals in this pedigree exhibited a base change causing the nonconservative substitution of an evolutionarily conserved amino acid. Because this change was not present in 240 normal chromosomes and was near another HyperPP mutation, it fulfilled the most commonly used criteria for being a mutation rather than a polymorphism. However, linkage studies using single-strand conformation polymorphism–derived and sequence-derived haplotypes excluded this base change as a causative mutation: these data serve as a cautionary example of potential pitfalls in the delineation of change-of-function point mutations.

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Selected References

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  1. Cannon S. C., Brown R. H., Jr, Corey D. P. A sodium channel defect in hyperkalemic periodic paralysis: potassium-induced failure of inactivation. Neuron. 1991 Apr;6(4):619–626. doi: 10.1016/0896-6273(91)90064-7. [DOI] [PubMed] [Google Scholar]
  2. Ebers G. C., George A. L., Barchi R. L., Ting-Passador S. S., Kallen R. G., Lathrop G. M., Beckmann J. S., Hahn A. F., Brown W. F., Campbell R. D. Paramyotonia congenita and hyperkalemic periodic paralysis are linked to the adult muscle sodium channel gene. Ann Neurol. 1991 Dec;30(6):810–816. doi: 10.1002/ana.410300610. [DOI] [PubMed] [Google Scholar]
  3. Fontaine B., Khurana T. S., Hoffman E. P., Bruns G. A., Haines J. L., Trofatter J. A., Hanson M. P., Rich J., McFarlane H., Yasek D. M. Hyperkalemic periodic paralysis and the adult muscle sodium channel alpha-subunit gene. Science. 1990 Nov 16;250(4983):1000–1002. doi: 10.1126/science.2173143. [DOI] [PubMed] [Google Scholar]
  4. George A. L., Jr, Komisarof J., Kallen R. G., Barchi R. L. Primary structure of the adult human skeletal muscle voltage-dependent sodium channel. Ann Neurol. 1992 Feb;31(2):131–137. doi: 10.1002/ana.410310203. [DOI] [PubMed] [Google Scholar]
  5. Hardy J. Framing beta-amyloid. Nat Genet. 1992 Jul;1(4):233–234. doi: 10.1038/ng0792-233. [DOI] [PubMed] [Google Scholar]
  6. Jones C. T., Morris S., Yates C. M., Moffoot A., Sharpe C., Brock D. J., St Clair D. Mutation in codon 713 of the beta amyloid precursor protein gene presenting with schizophrenia. Nat Genet. 1992 Jul;1(4):306–309. doi: 10.1038/ng0792-306. [DOI] [PubMed] [Google Scholar]
  7. Koch M. C., Ricker K., Otto M., Grimm T., Bender K., Zoll B., Harper P. S., Lehmann-Horn F., Rüdel R., Hoffman E. P. Linkage data suggesting allelic heterogeneity for paramyotonia congenita and hyperkalemic periodic paralysis on chromosome 17. Hum Genet. 1991 Nov;88(1):71–74. doi: 10.1007/BF00204932. [DOI] [PubMed] [Google Scholar]
  8. Koch M. C., Ricker K., Otto M., Grimm T., Hoffman E. P., Rüdel R., Bender K., Zoll B., Harper P. S., Lehmann-Horn F. Confirmation of linkage of hyperkalaemic periodic paralysis to chromosome 17. J Med Genet. 1991 Sep;28(9):583–586. doi: 10.1136/jmg.28.9.583. [DOI] [PMC free article] [PubMed] [Google Scholar]
  9. Lehmann-Horn F., Iaizzo P. A., Hatt H., Franke C. Altered gating and conductance of Na+ channels in hyperkalemic periodic paralysis. Pflugers Arch. 1991 Apr;418(3):297–299. doi: 10.1007/BF00370530. [DOI] [PubMed] [Google Scholar]
  10. Lehmann-Horn F., Küther G., Ricker K., Grafe P., Ballanyi K., Rüdel R. Adynamia episodica hereditaria with myotonia: a non-inactivating sodium current and the effect of extracellular pH. Muscle Nerve. 1987 May;10(4):363–374. doi: 10.1002/mus.880100414. [DOI] [PubMed] [Google Scholar]
  11. Lehmann-Horn F., Rüdel R., Dengler R., Lorković H., Haass A., Ricker K. Membrane defects in paramyotonia congenita with and without myotonia in a warm environment. Muscle Nerve. 1981 Sep-Oct;4(5):396–406. doi: 10.1002/mus.880040508. [DOI] [PubMed] [Google Scholar]
  12. McClatchey A. I., McKenna-Yasek D., Cros D., Worthen H. G., Kuncl R. W., DeSilva S. M., Cornblath D. R., Gusella J. F., Brown R. H., Jr Novel mutations in families with unusual and variable disorders of the skeletal muscle sodium channel. Nat Genet. 1992 Oct;2(2):148–152. doi: 10.1038/ng1092-148. [DOI] [PubMed] [Google Scholar]
  13. McClatchey A. I., Trofatter J., McKenna-Yasek D., Raskind W., Bird T., Pericak-Vance M., Gilchrist J., Arahata K., Radosavljevic D., Worthen H. G. Dinucleotide repeat polymorphisms at the SCN4A locus suggest allelic heterogeneity of hyperkalemic periodic paralysis and paramyotonia congenita. Am J Hum Genet. 1992 May;50(5):896–901. [PMC free article] [PubMed] [Google Scholar]
  14. McClatchey A. I., Van den Bergh P., Pericak-Vance M. A., Raskind W., Verellen C., McKenna-Yasek D., Rao K., Haines J. L., Bird T., Brown R. H., Jr Temperature-sensitive mutations in the III-IV cytoplasmic loop region of the skeletal muscle sodium channel gene in paramyotonia congenita. Cell. 1992 Feb 21;68(4):769–774. doi: 10.1016/0092-8674(92)90151-2. [DOI] [PubMed] [Google Scholar]
  15. Orita M., Suzuki Y., Sekiya T., Hayashi K. Rapid and sensitive detection of point mutations and DNA polymorphisms using the polymerase chain reaction. Genomics. 1989 Nov;5(4):874–879. doi: 10.1016/0888-7543(89)90129-8. [DOI] [PubMed] [Google Scholar]
  16. Ptacek L. J., Trimmer J. S., Agnew W. S., Roberts J. W., Petajan J. H., Leppert M. Paramyotonia congenita and hyperkalemic periodic paralysis map to the same sodium-channel gene locus. Am J Hum Genet. 1991 Oct;49(4):851–854. [PMC free article] [PubMed] [Google Scholar]
  17. Ptacek L. J., Tyler F., Trimmer J. S., Agnew W. S., Leppert M. Analysis in a large hyperkalemic periodic paralysis pedigree supports tight linkage to a sodium channel locus. Am J Hum Genet. 1991 Aug;49(2):378–382. [PMC free article] [PubMed] [Google Scholar]
  18. Ptácek L. J., George A. L., Jr, Barchi R. L., Griggs R. C., Riggs J. E., Robertson M., Leppert M. F. Mutations in an S4 segment of the adult skeletal muscle sodium channel cause paramyotonia congenita. Neuron. 1992 May;8(5):891–897. doi: 10.1016/0896-6273(92)90203-p. [DOI] [PubMed] [Google Scholar]
  19. Ptácek L. J., George A. L., Jr, Griggs R. C., Tawil R., Kallen R. G., Barchi R. L., Robertson M., Leppert M. F. Identification of a mutation in the gene causing hyperkalemic periodic paralysis. Cell. 1991 Nov 29;67(5):1021–1027. doi: 10.1016/0092-8674(91)90374-8. [DOI] [PubMed] [Google Scholar]
  20. Richards R. I., Holman K., Friend K., Kremer E., Hillen D., Staples A., Brown W. T., Goonewardena P., Tarleton J., Schwartz C. Evidence of founder chromosomes in fragile X syndrome. Nat Genet. 1992 Jul;1(4):257–260. doi: 10.1038/ng0792-257. [DOI] [PubMed] [Google Scholar]
  21. Rojas C. V., Wang J. Z., Schwartz L. S., Hoffman E. P., Powell B. R., Brown R. H., Jr A Met-to-Val mutation in the skeletal muscle Na+ channel alpha-subunit in hyperkalaemic periodic paralysis. Nature. 1991 Dec 5;354(6352):387–389. doi: 10.1038/354387a0. [DOI] [PubMed] [Google Scholar]
  22. Rudolph J. A., Spier S. J., Byrns G., Hoffman E. P. Linkage of hyperkalaemic periodic paralysis in quarter horses to the horse adult skeletal muscle sodium channel gene. Anim Genet. 1992;23(3):241–250. doi: 10.1111/j.1365-2052.1992.tb00136.x. [DOI] [PubMed] [Google Scholar]
  23. Rudolph J. A., Spier S. J., Byrns G., Rojas C. V., Bernoco D., Hoffman E. P. Periodic paralysis in quarter horses: a sodium channel mutation disseminated by selective breeding. Nat Genet. 1992 Oct;2(2):144–147. doi: 10.1038/ng1092-144. [DOI] [PubMed] [Google Scholar]
  24. Spier S. J., Carlson G. P., Holliday T. A., Cardinet G. H., 3rd, Pickar J. G. Hyperkalemic periodic paralysis in horses. J Am Vet Med Assoc. 1990 Oct 15;197(8):1009–1017. [PubMed] [Google Scholar]
  25. Split verdict on schizophrenia. Nat Genet. 1992 Jul;1(4):231–232. doi: 10.1038/ng0792-231. [DOI] [PubMed] [Google Scholar]
  26. Wang J. Z., Rojas C. V., Zhou J. H., Schwartz L. S., Nicholas H., Hoffman E. P. Sequence and genomic structure of the human adult skeletal muscle sodium channel alpha subunit gene on 17q. Biochem Biophys Res Commun. 1992 Jan 31;182(2):794–801. doi: 10.1016/0006-291x(92)91802-w. [DOI] [PubMed] [Google Scholar]
  27. Weber J. L. Informativeness of human (dC-dA)n.(dG-dT)n polymorphisms. Genomics. 1990 Aug;7(4):524–530. doi: 10.1016/0888-7543(90)90195-z. [DOI] [PubMed] [Google Scholar]
  28. Zielenski J., Markiewicz D., Rininsland F., Rommens J., Tsui L. C. A cluster of highly polymorphic dinucleotide repeats in intron 17b of the cystic fibrosis transmembrane conductance regulator (CFTR) gene. Am J Hum Genet. 1991 Dec;49(6):1256–1262. [PMC free article] [PubMed] [Google Scholar]

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