Abstract
The clonal diversity of 101 isolates of the pioneer bacterium Streptococcus mitis biovar 1 obtained from the oral cavities of 40 human neonates 1 to 3 days, 2 weeks, and 1 month postpartum was examined by using rRNA gene restriction patterns. There was a high degree of genetic diversity, with the 101 isolates comprising 93 unique PvuII ribotypes. There were eight identical pairs of ribotype patterns, and seven of the eight pairs were obtained from individual neonates. Only one identical pair comprised isolates obtained from different neonates. In all but two cases, isolates with matching ribotypes were obtained at one visit. Two pairs of isolates with matching ribotype patterns were obtained from neonates on successive visits. The ribotype patterns of the isolates were examined by cluster analysis. The isolates forming each cluster were very similar, yet each cluster was well separated from its neighbors. When several isolates were obtained from individual neonates at a particular visit, in some instances they were contained in a single cluster, whereas in other cases each isolate was contained in a separate cluster. Isolates obtained from individual neonates on successive visits tended to be contained in different clusters. This high degree of diversity, which has been observed in other mucosal commensal bacteria, may serve as a mechanism for avoiding immune elimination of these bacteria.
Full Text
The Full Text of this article is available as a PDF (209.0 KB).
Selected References
These references are in PubMed. This may not be the complete list of references from this article.
- Alaluusua S., Alaluusua S. J., Karjalainen J., Saarela M., Holttinen T., Kallio M., Hölttä P., Torkko H., Relander P., Asikainen S. The demonstration by ribotyping of the stability of oral Streptococcus mutans infection over 5 to 7 years in children. Arch Oral Biol. 1994 Jun;39(6):467–471. doi: 10.1016/0003-9969(94)90142-2. [DOI] [PubMed] [Google Scholar]
- Anderson D. J., Kuhns J. S., Vasil M. L., Gerding D. N., Janoff E. N. DNA fingerprinting by pulsed field gel electrophoresis and ribotyping to distinguish Pseudomonas cepacia isolates from a nosocomial outbreak. J Clin Microbiol. 1991 Mar;29(3):648–649. doi: 10.1128/jcm.29.3.648-649.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Barsotti O., Morrier J. J., Decoret D., Benay G., Rocca J. P. An investigation into the use of restriction endonuclease analysis for the study of transmission of Actinomyces. J Clin Periodontol. 1993 Jul;20(6):436–442. doi: 10.1111/j.1600-051x.1993.tb00385.x. [DOI] [PubMed] [Google Scholar]
- Bouvet A., Grimont F., Grimont P. A. Intraspecies variations in nutritionally variant streptococci: rRNA gene restriction patterns of Streptococcus defectivus and Streptococcus adjacens. Int J Syst Bacteriol. 1991 Oct;41(4):483–486. doi: 10.1099/00207713-41-4-483. [DOI] [PubMed] [Google Scholar]
- Bratthall D., Gibbons R. J. Antigenic variation of Streptococcus mutans colonizing gnotobiotic rats. Infect Immun. 1975 Dec;12(6):1231–1236. doi: 10.1128/iai.12.6.1231-1236.1975. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Bruce K. D., Jordens J. Z. Characterization of noncapsulate Haemophilus influenzae by whole-cell polypeptide profiles, restriction endonuclease analysis, and rRNA gene restriction patterns. J Clin Microbiol. 1991 Feb;29(2):291–296. doi: 10.1128/jcm.29.2.291-296.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Caufield P. W., Walker T. M. Genetic diversity within Streptococcus mutans evident from chromosomal DNA restriction fragment polymorphisms. J Clin Microbiol. 1989 Feb;27(2):274–278. doi: 10.1128/jcm.27.2.274-278.1989. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Caugant D. A., Levin B. R., Selander R. K. Genetic diversity and temporal variation in the E. coli population of a human host. Genetics. 1981 Jul;98(3):467–490. doi: 10.1093/genetics/98.3.467. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Caugant D. A., Mocca L. F., Frasch C. E., Frøholm L. O., Zollinger W. D., Selander R. K. Genetic structure of Neisseria meningitidis populations in relation to serogroup, serotype, and outer membrane protein pattern. J Bacteriol. 1987 Jun;169(6):2781–2792. doi: 10.1128/jb.169.6.2781-2792.1987. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Caugant D. A., Selander R. K., Olsen I. Differentiation between Actinobacillus (Haemophilus) actinomycetemcomitans, Haemophilus aphrophilus and Haemophilus paraphrophilus by multilocus enzyme electrophoresis. J Gen Microbiol. 1990 Oct;136(10):2135–2141. doi: 10.1099/00221287-136-10-2135. [DOI] [PubMed] [Google Scholar]
- Chen C., Slots J. Clonal analysis of Porphyromonas gingivalis by the arbitrarily primed polymerase chain reaction. Oral Microbiol Immunol. 1994 Apr;9(2):99–103. doi: 10.1111/j.1399-302x.1994.tb00042.x. [DOI] [PubMed] [Google Scholar]
- Cole M. F., Evans M., Fitzsimmons S., Johnson J., Pearce C., Sheridan M. J., Wientzen R., Bowden G. Pioneer oral streptococci produce immunoglobulin A1 protease. Infect Immun. 1994 Jun;62(6):2165–2168. doi: 10.1128/iai.62.6.2165-2168.1994. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Douglas C. W., Pease A. A., Whiley R. A. Amylase-binding as a discriminator among oral streptococci. FEMS Microbiol Lett. 1990 Jan 1;54(1-3):193–197. doi: 10.1016/0378-1097(90)90281-t. [DOI] [PubMed] [Google Scholar]
- Dowson C. G., Hutchison A., Brannigan J. A., George R. C., Hansman D., Liñares J., Tomasz A., Smith J. M., Spratt B. G. Horizontal transfer of penicillin-binding protein genes in penicillin-resistant clinical isolates of Streptococcus pneumoniae. Proc Natl Acad Sci U S A. 1989 Nov;86(22):8842–8846. doi: 10.1073/pnas.86.22.8842. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Fitzsimmons S. P., Evans M. K., Pearce C. L., Sheridan M. J., Wientzen R., Cole M. F. Immunoglobulin A subclasses in infants' saliva and in saliva and milk from their mothers. J Pediatr. 1994 Apr;124(4):566–573. doi: 10.1016/s0022-3476(05)83135-x. [DOI] [PubMed] [Google Scholar]
- Freter R., Brickner H., Fekete J., Vickerman M. M., Carey K. E. Survival and implantation of Escherichia coli in the intestinal tract. Infect Immun. 1983 Feb;39(2):686–703. doi: 10.1128/iai.39.2.686-703.1983. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Guthmiller J. M., Kolodrubetz D., Kraig E. A panel of probes detects DNA polymorphisms in human and non-human primate isolates of a periodontal pathogen, Actinobacillus actinomycetemcomitans. Microb Pathog. 1993 Feb;14(2):103–115. doi: 10.1006/mpat.1993.1011. [DOI] [PubMed] [Google Scholar]
- Han N., Hoover C. I., Winkler J. R., Ng C. Y., Armitage G. C. Identification of genomic clonal types of Actinobacillus actinomycetemcomitans by restriction endonuclease analysis. J Clin Microbiol. 1991 Aug;29(8):1574–1578. doi: 10.1128/jcm.29.8.1574-1578.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hermans P. W., Sluijter M., Hoogenboezem T., Heersma H., van Belkum A., de Groot R. Comparative study of five different DNA fingerprint techniques for molecular typing of Streptococcus pneumoniae strains. J Clin Microbiol. 1995 Jun;33(6):1606–1612. doi: 10.1128/jcm.33.6.1606-1612.1995. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hohwy J., Kilian M. Clonal diversity of the Streptococcus mitis biovar 1 population in the human oral cavity and pharynx. Oral Microbiol Immunol. 1995 Feb;10(1):19–25. doi: 10.1111/j.1399-302x.1995.tb00113.x. [DOI] [PubMed] [Google Scholar]
- Irino K., Grimont F., Casin I., Grimont P. A. rRNA gene restriction patterns of Haemophilus influenzae biogroup aegyptius strains associated with Brazilian purpuric fever. J Clin Microbiol. 1988 Aug;26(8):1535–1538. doi: 10.1128/jcm.26.8.1535-1538.1988. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kilian M., Nyvad B. Ability to bind salivary alpha-amylase discriminates certain viridans group streptococcal species. J Clin Microbiol. 1990 Nov;28(11):2576–2577. doi: 10.1128/jcm.28.11.2576-2577.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kozai K., Wang D. S., Sandham H. J., Phillips H. I. Changes in strains of mutans streptococci induced by treatment with chlorhexidine varnish. J Dent Res. 1991 Sep;70(9):1252–1257. doi: 10.1177/00220345910700090401. [DOI] [PubMed] [Google Scholar]
- Kulkarni G. V., Chan K. H., Sandham H. J. An investigation into the use of restriction endonuclease analysis for the study of transmission of mutans streptococci. J Dent Res. 1989 Jul;68(7):1155–1161. doi: 10.1177/00220345890680070401. [DOI] [PubMed] [Google Scholar]
- Könönen E., Saarela M., Karjalainen J., Jousimies-Somer H., Alaluusua S., Asikainen S. Transmission of oral Prevotella melaninogenica between a mother and her young child. Oral Microbiol Immunol. 1994 Oct;9(5):310–314. doi: 10.1111/j.1399-302x.1994.tb00077.x. [DOI] [PubMed] [Google Scholar]
- Lee S. F. Active release of bound antibody by Streptococcus mutans. Infect Immun. 1995 May;63(5):1940–1946. doi: 10.1128/iai.63.5.1940-1946.1995. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Loos B. G., Dyer D. W., Whittam T. S., Selander R. K. Genetic structure of populations of Porphyromonas gingivalis associated with periodontitis and other oral infections. Infect Immun. 1993 Jan;61(1):204–212. doi: 10.1128/iai.61.1.204-212.1993. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Loos B. G., Van Winkelhoff A. J., Dunford R. G., Genco R. J., De Graaff J., Dickinson D. P., Dyer D. W. A statistical approach to the ecology of Porphyromonas gingivalis. J Dent Res. 1992 Feb;71(2):353–358. doi: 10.1177/00220345920710020201. [DOI] [PubMed] [Google Scholar]
- Maslow J. N., Whittam T. S., Gilks C. F., Wilson R. A., Mulligan M. E., Adams K. S., Arbeit R. D. Clonal relationships among bloodstream isolates of Escherichia coli. Infect Immun. 1995 Jul;63(7):2409–2417. doi: 10.1128/iai.63.7.2409-2417.1995. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Musser J. M., Kroll J. S., Granoff D. M., Moxon E. R., Brodeur B. R., Campos J., Dabernat H., Frederiksen W., Hamel J., Hammond G. Global genetic structure and molecular epidemiology of encapsulated Haemophilus influenzae. Rev Infect Dis. 1990 Jan-Feb;12(1):75–111. doi: 10.1093/clinids/12.1.75. [DOI] [PubMed] [Google Scholar]
- Ménard C., Mouton C. Clonal diversity of the taxon Porphyromonas gingivalis assessed by random amplified polymorphic DNA fingerprinting. Infect Immun. 1995 Jul;63(7):2522–2531. doi: 10.1128/iai.63.7.2522-2531.1995. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ochman H., Whittam T. S., Caugant D. A., Selander R. K. Enzyme polymorphism and genetic population structure in Escherichia coli and Shigella. J Gen Microbiol. 1983 Sep;129(9):2715–2726. doi: 10.1099/00221287-129-9-2715. [DOI] [PubMed] [Google Scholar]
- Pearce C., Bowden G. H., Evans M., Fitzsimmons S. P., Johnson J., Sheridan M. J., Wientzen R., Cole M. F. Identification of pioneer viridans streptococci in the oral cavity of human neonates. J Med Microbiol. 1995 Jan;42(1):67–72. doi: 10.1099/00222615-42-1-67. [DOI] [PubMed] [Google Scholar]
- Poulsen K., Theilade E., Lally E. T., Demuth D. R., Kilian M. Population structure of Actinobacillus actinomycetemcomitans: a framework for studies of disease-associated properties. Microbiology. 1994 Aug;140(Pt 8):2049–2060. doi: 10.1099/13500872-140-8-2049. [DOI] [PubMed] [Google Scholar]
- Reinholdt J., Tomana M., Mortensen S. B., Kilian M. Molecular aspects of immunoglobulin A1 degradation by oral streptococci. Infect Immun. 1990 May;58(5):1186–1194. doi: 10.1128/iai.58.5.1186-1194.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Saarela M., Asikainen S., Jousimies-Somer H., Asikainen T., von Troil-Lindén B., Alaluusua S. Hybridization patterns of Actinobacillus actinomycetemcomitans serotypes a-e detected with an rRNA gene probe. Oral Microbiol Immunol. 1993 Apr;8(2):111–115. doi: 10.1111/j.1399-302x.1993.tb00555.x. [DOI] [PubMed] [Google Scholar]
- Selander R. K., McKinney R. M., Whittam T. S., Bibb W. F., Brenner D. J., Nolte F. S., Pattison P. E. Genetic structure of populations of Legionella pneumophila. J Bacteriol. 1985 Sep;163(3):1021–1037. doi: 10.1128/jb.163.3.1021-1037.1985. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Smith J. M., Smith N. H., O'Rourke M., Spratt B. G. How clonal are bacteria? Proc Natl Acad Sci U S A. 1993 May 15;90(10):4384–4388. doi: 10.1073/pnas.90.10.4384. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Stull T. L., LiPuma J. J., Edlind T. D. A broad-spectrum probe for molecular epidemiology of bacteria: ribosomal RNA. J Infect Dis. 1988 Feb;157(2):280–286. doi: 10.1093/infdis/157.2.280. [DOI] [PubMed] [Google Scholar]
- Thomson-Carter F. M., Carter P. E., Pennington T. H. Differentiation of staphylococcal species and strains by ribosomal RNA gene restriction patterns. J Gen Microbiol. 1989 Jul;135(7):2093–2097. doi: 10.1099/00221287-135-7-2093. [DOI] [PubMed] [Google Scholar]
- Tveten Y., Kristiansen B. E., Ask E., Jenkins A., Hofstad T. DNA fingerprinting of isolates of Staphylococcus aureus from newborns and their contacts. J Clin Microbiol. 1991 Jun;29(6):1100–1105. doi: 10.1128/jcm.29.6.1100-1105.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Upton M., Carter P. E., Morgan M., Edwards G. F., Pennington T. H. Clonal structure of invasive Streptococcus pyogenes in Northern Scotland. Epidemiol Infect. 1995 Oct;115(2):231–241. doi: 10.1017/s0950268800058362. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Woods T. C., Helsel L. O., Swaminathan B., Bibb W. F., Pinner R. W., Gellin B. G., Collin S. F., Waterman S. H., Reeves M. W., Brenner D. J. Characterization of Neisseria meningitidis serogroup C by multilocus enzyme electrophoresis and ribosomal DNA restriction profiles (ribotyping). J Clin Microbiol. 1992 Jan;30(1):132–137. doi: 10.1128/jcm.30.1.132-137.1992. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Zambon J. J., Sunday G. J., Smutko J. S. Molecular genetic analysis of Actinobacillus actinomycetemcomitans epidemiology. J Periodontol. 1990 Feb;61(2):75–80. doi: 10.1902/jop.1990.61.2.75. [DOI] [PubMed] [Google Scholar]