Skip to main content
American Journal of Human Genetics logoLink to American Journal of Human Genetics
. 1997 May;60(5):1184–1193.

Molecular analysis of deletion (17)(p11.2p11.2) in a family segregating a 17p paracentric inversion: implications for carriers of paracentric inversions.

S P Yang 1, S I Bidichandani 1, L E Figuera 1, R C Juyal 1, P J Saxon 1, A Baldini 1, P I Patel 1
PMCID: PMC1712444  PMID: 9150166

Abstract

A male child with multiple congenital anomalies initially was clinically diagnosed as having Smith-Lemli-Opitz syndrome (SLOS). Subsequent cytogenetic studies revealed an interstitial deletion of 17p11.2, which is associated with Smith-Magenis syndrome (SMS). Biochemical studies were not supportive of a diagnosis of SLOS, and the child did not display the typical SMS phenotype. The father's karyotype showed a paracentric inversion of 17p, with breakpoints in p11.2 and p13.3, and the same inversion was also found in two of the father's sisters. FISH analyses of the deleted and inverted 17p chromosomes indicated that the deletion was similar to that typically seen in SMS patients and was found to bracket the proximal inversion breakpoint. Available family members were genotyped at 33 polymorphic DNA loci in 17p. These studies determined that the deletion was of paternal origin and that the inversion was of grandpaternal origin. Haplotype analysis demonstrated that the 17p11.2 deletion arose following a recombination event involving the father's normal and inverted chromosome 17 homologues. A mechanism is proposed to explain the simultaneous deletion and apparent "reinversion" of the recombinant paternal chromosome. These findings have implications for prenatal counseling of carriers of paracentric inversions, who typically are considered to bear minimal reproductive risk.

Full text

PDF
1184

Images in this article

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Anderson M. A., Gusella J. F. Use of cyclosporin A in establishing Epstein-Barr virus-transformed human lymphoblastoid cell lines. In Vitro. 1984 Nov;20(11):856–858. doi: 10.1007/BF02619631. [DOI] [PubMed] [Google Scholar]
  2. Berry R., Wilson H., Robinson J., Sandlin C., Tyson W., Campbell J., Porreco R., Manchester D. Apparent Smith-Lemli-Opitz syndrome and Miller-Dieker syndrome in a family with segregating translocation t(7;17)(q34;p13.1). Am J Med Genet. 1989 Nov;34(3):358–365. doi: 10.1002/ajmg.1320340312. [DOI] [PubMed] [Google Scholar]
  3. Colley A. F., Leversha M. A., Voullaire L. E., Rogers J. G. Five cases demonstrating the distinctive behavioural features of chromosome deletion 17(p11.2 p11.2) (Smith-Magenis syndrome). J Paediatr Child Health. 1990 Feb;26(1):17–21. doi: 10.1111/j.1440-1754.1990.tb02372.x. [DOI] [PubMed] [Google Scholar]
  4. Daniel A., Hook E. B., Wulf G. Risks of unbalanced progeny at amniocentesis to carriers of chromosome rearrangements: data from United States and Canadian laboratories. Am J Med Genet. 1989 May;33(1):14–53. doi: 10.1002/ajmg.1320330105. [DOI] [PubMed] [Google Scholar]
  5. Dib C., Fauré S., Fizames C., Samson D., Drouot N., Vignal A., Millasseau P., Marc S., Hazan J., Seboun E. A comprehensive genetic map of the human genome based on 5,264 microsatellites. Nature. 1996 Mar 14;380(6570):152–154. doi: 10.1038/380152a0. [DOI] [PubMed] [Google Scholar]
  6. Figuera L. E., Pandolfo M., Dunne P. W., Cantú J. M., Patel P. I. Mapping of the congenital generalized hypertrichosis locus to chromosome Xq24-q27.1. Nat Genet. 1995 Jun;10(2):202–207. doi: 10.1038/ng0695-202. [DOI] [PubMed] [Google Scholar]
  7. Finucane B. M., Jaeger E. R., Kurtz M. B., Weinstein M., Scott C. I., Jr Eye abnormalities in the Smith-Magenis contiguous gene deletion syndrome. Am J Med Genet. 1993 Feb 15;45(4):443–446. doi: 10.1002/ajmg.1320450409. [DOI] [PubMed] [Google Scholar]
  8. Friedman J. M., Harrod M. J., Howard-Peebles P. N. Complementary duplication and deletion of 17 (pcen----p11.2): a family with a supernumerary chromosome comprised of an interstitially deleted segment. Am J Med Genet. 1992 Sep 1;44(1):37–40. doi: 10.1002/ajmg.1320440109. [DOI] [PubMed] [Google Scholar]
  9. Greenberg F., Guzzetta V., Montes de Oca-Luna R., Magenis R. E., Smith A. C., Richter S. F., Kondo I., Dobyns W. B., Patel P. I., Lupski J. R. Molecular analysis of the Smith-Magenis syndrome: a possible contiguous-gene syndrome associated with del(17)(p11.2). Am J Hum Genet. 1991 Dec;49(6):1207–1218. [PMC free article] [PubMed] [Google Scholar]
  10. Greenberg F., Lewis R. A., Potocki L., Glaze D., Parke J., Killian J., Murphy M. A., Williamson D., Brown F., Dutton R. Multi-disciplinary clinical study of Smith-Magenis syndrome (deletion 17p11.2) Am J Med Genet. 1996 Mar 29;62(3):247–254. doi: 10.1002/(SICI)1096-8628(19960329)62:3<247::AID-AJMG9>3.0.CO;2-Q. [DOI] [PubMed] [Google Scholar]
  11. Guzzetta V., Franco B., Trask B. J., Zhang H., Saucedo-Cardenas O., Montes de Oca-Luna R., Greenberg F., Chinault A. C., Lupski J. R., Patel P. I. Somatic cell hybrids, sequence-tagged sites, simple repeat polymorphisms, and yeast artificial chromosomes for physical and genetic mapping of proximal 17p. Genomics. 1992 Jul;13(3):551–559. doi: 10.1016/0888-7543(92)90124-b. [DOI] [PubMed] [Google Scholar]
  12. Hoo J. J., Lorenz R., Fischer A., Fuhrmann W. Tiny interstitial duplication of proximal 7q in association with a maternal paracentric inversion. Hum Genet. 1982;62(2):113–116. doi: 10.1007/BF00282296. [DOI] [PubMed] [Google Scholar]
  13. Inazawa J., Saito H., Ariyama T., Abe T., Nakamura Y. High-resolution cytogenetic mapping of 342 new cosmid markers including 43 RFLP markers on human chromosome 17 by fluorescence in situ hybridization. Genomics. 1993 Jul;17(1):153–162. doi: 10.1006/geno.1993.1297. [DOI] [PubMed] [Google Scholar]
  14. Juyal R. C., Figuera L. E., Hauge X., Elsea S. H., Lupski J. R., Greenberg F., Baldini A., Patel P. I. Molecular analyses of 17p11.2 deletions in 62 Smith-Magenis syndrome patients. Am J Hum Genet. 1996 May;58(5):998–1007. [PMC free article] [PubMed] [Google Scholar]
  15. Kondo I., Matsuura S., Kuwajima K., Tokashiki M., Izumikawa Y., Naritomi K., Niikawa N., Kajii T. Diagnostic hand anomalies in Smith-Magenis syndrome: four new patients with del (17)(p11.2p11.2) Am J Med Genet. 1991 Nov 1;41(2):225–229. doi: 10.1002/ajmg.1320410219. [DOI] [PubMed] [Google Scholar]
  16. Lockwood D., Hecht F., Dowman C., Hecht B. K., Rizkallah T. H., Goodwin T. M., Allanson J. Chromosome subband 17p11.2 deletion: a minute deletion syndrome. J Med Genet. 1988 Nov;25(11):732–737. doi: 10.1136/jmg.25.11.732. [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. Lupski J. R., de Oca-Luna R. M., Slaugenhaupt S., Pentao L., Guzzetta V., Trask B. J., Saucedo-Cardenas O., Barker D. F., Killian J. M., Garcia C. A. DNA duplication associated with Charcot-Marie-Tooth disease type 1A. Cell. 1991 Jul 26;66(2):219–232. doi: 10.1016/0092-8674(91)90613-4. [DOI] [PubMed] [Google Scholar]
  18. Madan K. Paracentric inversions: a review. Hum Genet. 1995 Nov;96(5):503–515. doi: 10.1007/BF00197403. [DOI] [PubMed] [Google Scholar]
  19. Moncla A., Livet M. O., Auger M., Mattei J. F., Mattei M. G., Giraud F. Smith-Magenis syndrome: a new contiguous gene syndrome. Report of three new cases. J Med Genet. 1991 Sep;28(9):627–632. doi: 10.1136/jmg.28.9.627. [DOI] [PMC free article] [PubMed] [Google Scholar]
  20. Opitz J. M. RSH/SLO ("Smith-Lemli-Opitz") syndrome: historical, genetic, and developmental considerations. Am J Med Genet. 1994 May 1;50(4):344–346. doi: 10.1002/ajmg.1320500408. [DOI] [PubMed] [Google Scholar]
  21. Patel P. I., Franco B., Garcia C., Slaugenhaupt S. A., Nakamura Y., Ledbetter D. H., Chakravarti A., Lupski J. R. Genetic mapping of autosomal dominant Charcot-Marie-Tooth disease in a large French-Acadian kindred: identification of new linked markers on chromosome 17. Am J Hum Genet. 1990 Apr;46(4):801–809. [PMC free article] [PubMed] [Google Scholar]
  22. Pettenati M. J., Rao P. N., Phelan M. C., Grass F., Rao K. W., Cosper P., Carroll A. J., Elder F., Smith J. L., Higgins M. D. Paracentric inversions in humans: a review of 446 paracentric inversions with presentation of 120 new cases. Am J Med Genet. 1995 Jan 16;55(2):171–187. doi: 10.1002/ajmg.1320550207. [DOI] [PubMed] [Google Scholar]
  23. Ray R., Rincon-Limas D., Wright R. A., Davis S. N., Lupski J. R., Patel P. I. Three polymorphisms at the D17S29 locus. Nucleic Acids Res. 1990 Aug 25;18(16):4958–4958. doi: 10.1093/nar/18.16.4958. [DOI] [PMC free article] [PubMed] [Google Scholar]
  24. SMITH D. W., LEMLI L., OPITZ J. M. A NEWLY RECOGNIZED SYNDROME OF MULTIPLE CONGENITAL ANOMALIES. J Pediatr. 1964 Feb;64:210–217. doi: 10.1016/s0022-3476(64)80264-x. [DOI] [PubMed] [Google Scholar]
  25. Smith A. C., McGavran L., Robinson J., Waldstein G., Macfarlane J., Zonona J., Reiss J., Lahr M., Allen L., Magenis E. Interstitial deletion of (17)(p11.2p11.2) in nine patients. Am J Med Genet. 1986 Jul;24(3):393–414. doi: 10.1002/ajmg.1320240303. [DOI] [PubMed] [Google Scholar]
  26. Stratton R. F., Dobyns W. B., Greenberg F., DeSana J. B., Moore C., Fidone G., Runge G. H., Feldman P., Sekhon G. S., Pauli R. M. Interstitial deletion of (17)(p11.2p11.2): report of six additional patients with a new chromosome deletion syndrome. Am J Med Genet. 1986 Jul;24(3):421–432. doi: 10.1002/ajmg.1320240305. [DOI] [PubMed] [Google Scholar]
  27. Sutherland G. R., Callen D. F., Gardner R. J. Paracentric inversions do not normally generate monocentric recombinant chromosomes. Am J Med Genet. 1995 Nov 20;59(3):390–392. doi: 10.1002/ajmg.1320590323. [DOI] [PubMed] [Google Scholar]
  28. Trask B. J., Mefford H., van den Engh G., Massa H. F., Juyal R. C., Potocki L., Finucane B., Abuelo D. N., Witt D. R., Magenis E. Quantification by flow cytometry of chromosome-17 deletions in Smith-Magenis syndrome patients. Hum Genet. 1996 Dec;98(6):710–718. doi: 10.1007/s004390050291. [DOI] [PubMed] [Google Scholar]
  29. Wallace M., Zori R. T., Alley T., Whidden E., Gray B. A., Williams C. A. Smith-Lemli-Opitz syndrome in a female with a de novo, balanced translocation involving 7q32: probable disruption of an SLOS gene. Am J Med Genet. 1994 May 1;50(4):368–374. doi: 10.1002/ajmg.1320500414. [DOI] [PubMed] [Google Scholar]
  30. Wright E. C., Goldgar D. E., Fain P. R., Barker D. F., Skolnick M. H. A genetic map of human chromosome 17p. Genomics. 1990 May;7(1):103–109. doi: 10.1016/0888-7543(90)90524-x. [DOI] [PubMed] [Google Scholar]
  31. Zori R. T., Lupski J. R., Heju Z., Greenberg F., Killian J. M., Gray B. A., Driscoll D. J., Patel P. I., Zackowski J. L. Clinical, cytogenetic, and molecular evidence for an infant with Smith-Magenis syndrome born from a mother having a mosaic 17p11.2p12 deletion. Am J Med Genet. 1993 Sep 15;47(4):504–511. doi: 10.1002/ajmg.1320470414. [DOI] [PubMed] [Google Scholar]
  32. de Rijk-van Andel J. F., Catsman-Berrevoets C. E., van Hemel J. O., Hamers A. J. Clinical and chromosome studies of three patients with Smith-Magenis syndrome. Dev Med Child Neurol. 1991 Apr;33(4):343–347. doi: 10.1111/j.1469-8749.1991.tb14885.x. [DOI] [PubMed] [Google Scholar]

Articles from American Journal of Human Genetics are provided here courtesy of American Society of Human Genetics

RESOURCES