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American Journal of Human Genetics logoLink to American Journal of Human Genetics
. 1988 May;42(5):712–717.

Haplotypes of the coagulation factor XIII A subunit locus in normal and deficient subjects.

P G Board 1, R Chapple 1, M Coggan 1
PMCID: PMC1715186  PMID: 2895980

Abstract

Several RFLPs have been detected using a cDNA fragment encoding the amino-terminal half of the A subunit of factor XIII. The RFLPs show little linkage disequilibrium and form many different haplotypes that can be used to identify chromosomes transmitting factor XIII A subunit deficiency. Southern blot analysis of three deficient individuals from two families showed that, in these cases, factor XIII A subunit deficiency did not result from a major gene deletion or rearrangement. Factor XIII A subunit deficiency was found to be associated with three different haplotypes, suggesting heterogeneity in the mutations causing this disorder.

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Selected References

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  1. Barker D., Holm T., White R. A locus on chromosome 11p with multiple restriction site polymorphisms. Am J Hum Genet. 1984 Nov;36(6):1159–1171. [PMC free article] [PubMed] [Google Scholar]
  2. Bech-Hansen N. T., Linsley P. S., Cox D. W. Restriction fragment length polymorphisms associated with immunoglobulin C gamma genes reveal linkage disequilibrium and genomic organization. Proc Natl Acad Sci U S A. 1983 Nov;80(22):6952–6956. doi: 10.1073/pnas.80.22.6952. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. Board P. G. Genetic polymorphism of the A subunit of human coagulation factor XIII. Am J Hum Genet. 1979 Mar;31(2):116–124. [PMC free article] [PubMed] [Google Scholar]
  4. Board P. G., Reid M., Serjeantson S. The gene for coagulation factor XIII a subunit (F13A) is distal to HLA on chromosome 6. Hum Genet. 1984;67(4):406–408. doi: 10.1007/BF00291400. [DOI] [PubMed] [Google Scholar]
  5. Castle S. L., Board P. G. Biochemical characterisation of genetically variant and abnormal blood coagulation factor XIII A subunits. Clin Chim Acta. 1983 Sep 30;133(2):141–151. doi: 10.1016/0009-8981(83)90399-6. [DOI] [PubMed] [Google Scholar]
  6. Castle S., Board P. G., Anderson R. A. Genetic heterogeneity of factor XIII deficiency: first description of unstable A subunits. Br J Haematol. 1981 Jun;48(2):337–342. [PubMed] [Google Scholar]
  7. Chakravarti A., Buetow K. H. A strategy for using multiple linked markers for genetic counseling. Am J Hum Genet. 1985 Sep;37(5):984–997. [PMC free article] [PubMed] [Google Scholar]
  8. Chakravarti A., Buetow K. H., Antonarakis S. E., Waber P. G., Boehm C. D., Kazazian H. H. Nonuniform recombination within the human beta-globin gene cluster. Am J Hum Genet. 1984 Nov;36(6):1239–1258. [PMC free article] [PubMed] [Google Scholar]
  9. Chakravarti A., Phillips J. A., 3rd, Mellits K. H., Buetow K. H., Seeburg P. H. Patterns of polymorphism and linkage disequilibrium suggest independent origins of the human growth hormone gene cluster. Proc Natl Acad Sci U S A. 1984 Oct;81(19):6085–6089. doi: 10.1073/pnas.81.19.6085. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Cox D. W., Woo S. L., Mansfield T. DNA restriction fragments associated with alpha 1-antitrypsin indicate a single origin for deficiency allele PI Z. Nature. 1985 Jul 4;316(6023):79–81. doi: 10.1038/316079a0. [DOI] [PubMed] [Google Scholar]
  11. Eiberg H., Nielsen L. S., Mohr J. Confirmation of F13A assignment and sequence information concerning F13A-HLA-GLO. Clin Genet. 1984 Nov;26(5):385–388. doi: 10.1111/j.1399-0004.1984.tb01077.x. [DOI] [PubMed] [Google Scholar]
  12. Fear J. D., Miloszewski K. J., Losowsky M. S. Factor XIII levels in five families of patients with inherited factor XIII deficiency: support for an autosomal recessive inheritance. Thromb Haemost. 1983 Aug 30;50(2):588–590. [PubMed] [Google Scholar]
  13. Folk J. E., Finlayson J. S. The epsilon-(gamma-glutamyl)lysine crosslink and the catalytic role of transglutaminases. Adv Protein Chem. 1977;31:1–133. doi: 10.1016/s0065-3233(08)60217-x. [DOI] [PubMed] [Google Scholar]
  14. Gaffney P. J., Whitaker A. N. Fibrin crosslinks and lysis rates. Thromb Res. 1979 Jan;14(1):85–94. doi: 10.1016/0049-3848(79)90027-6. [DOI] [PubMed] [Google Scholar]
  15. Grundmann U., Amann E., Zettlmeissl G., Küpper H. A. Characterization of cDNA coding for human factor XIIIa. Proc Natl Acad Sci U S A. 1986 Nov;83(21):8024–8028. doi: 10.1073/pnas.83.21.8024. [DOI] [PMC free article] [PubMed] [Google Scholar]
  16. Grunebaum L., Cazenave J. P., Camerino G., Kloepfer C., Mandel J. L., Tolstoshev P., Jaye M., De la Salle H., Lecocq J. P. Carrier detection of Hemophilia B by using a restriction site polymorphism associated with the coagulation Factor IX gene. J Clin Invest. 1984 May;73(5):1491–1495. doi: 10.1172/JCI111354. [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. Ichinose A., Hendrickson L. E., Fujikawa K., Davie E. W. Amino acid sequence of the a subunit of human factor XIII. Biochemistry. 1986 Nov 4;25(22):6900–6906. doi: 10.1021/bi00370a025. [DOI] [PubMed] [Google Scholar]
  18. LORAND L., JACOBSEN A. Accelerated lysis of blood clots. Nature. 1962 Sep 1;195:911–912. doi: 10.1038/195911b0. [DOI] [PubMed] [Google Scholar]
  19. Lorand L., Losowsky M. S., Miloszewski K. J. Human factor XIII: fibrin-stabilizing factor. Prog Hemost Thromb. 1980;5:245–290. [PubMed] [Google Scholar]
  20. Mosher D. F., Schad P. E., Vann J. M. Cross-linking of collagen and fibronectin by factor XIIIa. Localization of participating glutaminyl residues to a tryptic fragment of fibronectin. J Biol Chem. 1980 Feb 10;255(3):1181–1188. [PubMed] [Google Scholar]
  21. Murray J. C., Buetow K. H., Donovan M., Hornung S., Motulsky A. G., Disteche C., Dyer K., Swisshelm K., Anderson J., Giblett E. Linkage disequilibrium of plasminogen polymorphisms and assignment of the gene to human chromosome 6q26-6q27. Am J Hum Genet. 1987 Apr;40(4):338–350. [PMC free article] [PubMed] [Google Scholar]
  22. Murray J. C., Mills K. A., Demopulos C. M., Hornung S., Motulsky A. G. Linkage disequilibrium and evolutionary relationships of DNA variants (restriction enzyme fragment length polymorphisms) at the serum albumin locus. Proc Natl Acad Sci U S A. 1984 Jun;81(11):3486–3490. doi: 10.1073/pnas.81.11.3486. [DOI] [PMC free article] [PubMed] [Google Scholar]
  23. Ohlsson M., Feder J., Cavalli-Sforza L. L., von Gabain A. Close linkage of alpha and beta interferons and infrequent duplication of beta interferon in humans. Proc Natl Acad Sci U S A. 1985 Jul;82(13):4473–4476. doi: 10.1073/pnas.82.13.4473. [DOI] [PMC free article] [PubMed] [Google Scholar]
  24. Olaisen B., Gedde-Dahl T., Jr, Teisberg P., Thorsby E., Siverts A., Jonassen R., Wilhelmy M. C. A structural locus for coagulation factor XIIIA (F13A) is located distal to the HLA region on chromosome 6p in man. Am J Hum Genet. 1985 Jan;37(1):215–220. [PMC free article] [PubMed] [Google Scholar]
  25. Reed K. C., Mann D. A. Rapid transfer of DNA from agarose gels to nylon membranes. Nucleic Acids Res. 1985 Oct 25;13(20):7207–7221. doi: 10.1093/nar/13.20.7207. [DOI] [PMC free article] [PubMed] [Google Scholar]
  26. Roberts W. W., Lorand L., Mockros L. F. Viscoelastic properties of fibrin clots. Biorheology. 1973 Mar;10(1):29–42. doi: 10.3233/bir-1973-10105. [DOI] [PubMed] [Google Scholar]
  27. Schwartz M. L., Pizzo S. V., Hill R. L., McKee P. A. Human Factor XIII from plasma and platelets. Molecular weights, subunit structures, proteolytic activation, and cross-linking of fibrinogen and fibrin. J Biol Chem. 1973 Feb 25;248(4):1395–1407. [PubMed] [Google Scholar]
  28. Shen L., Lorand L. Contribution of fibrin stabilization to clot strength. Supplementation of factor XIII-deficient plasma with the purified zymogen. J Clin Invest. 1983 May;71(5):1336–1341. doi: 10.1172/JCI110885. [DOI] [PMC free article] [PubMed] [Google Scholar]
  29. Weir B. S., Wilson S. R. Log-linear models for linked loci. Biometrics. 1986 Sep;42(3):665–670. [PubMed] [Google Scholar]
  30. Weisberg L. J., Shiu D. T., Greenberg C. S., Kan Y. W., Shuman M. A. Localization of the gene for coagulation factor XIII a-chain to chromosome 6 and identification of sites of synthesis. J Clin Invest. 1987 Feb;79(2):649–652. doi: 10.1172/JCI112862. [DOI] [PMC free article] [PubMed] [Google Scholar]

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