Abstract
Fanconi anemia (FA) is an autosomal recessive disease characterized by progressive pancytopenia, congenital malformations, and predisposition to acute myeloid leukemia. At least five complementation groups (FA-A-FA-E) have been identified. The relative prevalence of FA-A has been estimated at an average of approximately 65% but may widely vary according to ethnic background. In Italy, 11 of 12 patients analyzed by cell-fusion studies were assigned to group FA-A, suggesting an unusually high relative prevalence of this FA subtype in patients of Italian ancestry. We have screened the 43 exons of the FAA gene and their flanking intronic sequences in 38 Italian FA patients, using RNA-SSCP. Ten different mutations were detected: three nonsense and one missense substitutions, four putative splice mutations, an insertion, and a duplication. Most of the mutations are expected to cause a premature termination of the FAA protein at various sites throughout the molecule. Four protein variants were also found, three of which were polymorphisms. The missense mutation D1359Y, not found in chromosomes from healthy unrelated individuals, was responsible for a local alteration of hydrophobicity in the FAA protein, and it was likely to be pathogenic. Thus, the mutations so far encountered in the FAA gene are essentially all different. Since screening based on the analysis of single exons by genomic DNA amplification apparently detects only a minority of the mutations, methods designed to detect alterations in the genomic structure of the gene or in the FAA polypeptide may be helpful in the identification of FAA mutations.
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- Auerbach A. D. Fanconi anemia diagnosis and the diepoxybutane (DEB) test. Exp Hematol. 1993 Jun;21(6):731–733. [PubMed] [Google Scholar]
- Buchwald M. Complementation groups: one or more per gene? Nat Genet. 1995 Nov;11(3):228–230. doi: 10.1038/ng1195-228. [DOI] [PubMed] [Google Scholar]
- Butturini A., Gale R. P., Verlander P. C., Adler-Brecher B., Gillio A. P., Auerbach A. D. Hematologic abnormalities in Fanconi anemia: an International Fanconi Anemia Registry study. Blood. 1994 Sep 1;84(5):1650–1655. [PubMed] [Google Scholar]
- Chirgwin J. M., Przybyla A. E., MacDonald R. J., Rutter W. J. Isolation of biologically active ribonucleic acid from sources enriched in ribonuclease. Biochemistry. 1979 Nov 27;18(24):5294–5299. doi: 10.1021/bi00591a005. [DOI] [PubMed] [Google Scholar]
- Gibson R. A., Hajianpour A., Murer-Orlando M., Buchwald M., Mathew C. G. A nonsense mutation and exon skipping in the Fanconi anaemia group C gene. Hum Mol Genet. 1993 Jun;2(6):797–799. doi: 10.1093/hmg/2.6.797. [DOI] [PubMed] [Google Scholar]
- Gibson R. A., Morgan N. V., Goldstein L. H., Pearson I. C., Kesterton I. P., Foot N. J., Jansen S., Havenga C., Pearson T., de Ravel T. J. Novel mutations and polymorphisms in the Fanconi anemia group C gene. Hum Mutat. 1996;8(2):140–148. doi: 10.1002/(SICI)1098-1004(1996)8:2<140::AID-HUMU6>3.0.CO;2-F. [DOI] [PubMed] [Google Scholar]
- Gschwend M., Levran O., Kruglyak L., Ranade K., Verlander P. C., Shen S., Faure S., Weissenbach J., Altay C., Lander E. S. A locus for Fanconi anemia on 16q determined by homozygosity mapping. Am J Hum Genet. 1996 Aug;59(2):377–384. [PMC free article] [PubMed] [Google Scholar]
- Ianzano L., D'Apolito M., Centra M., Savino M., Levran O., Auerbach A. D., Cleton-Jansen A. M., Doggett N. A., Pronk J. C., Tipping A. J. The genomic organization of the Fanconi anemia group A (FAA) gene. Genomics. 1997 May 1;41(3):309–314. doi: 10.1006/geno.1997.4675. [DOI] [PubMed] [Google Scholar]
- Joenje H., Lo ten Foe J. R., Oostra A. B., van Berkel C. G., Rooimans M. A., Schroeder-Kurth T., Wegner R. D., Gille J. J., Buchwald M., Arwert F. Classification of Fanconi anemia patients by complementation analysis: evidence for a fifth genetic subtype. Blood. 1995 Sep 15;86(6):2156–2160. [PubMed] [Google Scholar]
- Lo Ten Foe J. R., Rooimans M. A., Bosnoyan-Collins L., Alon N., Wijker M., Parker L., Lightfoot J., Carreau M., Callen D. F., Savoia A. Expression cloning of a cDNA for the major Fanconi anaemia gene, FAA. Nat Genet. 1996 Nov;14(3):320–323. doi: 10.1038/ng1196-320. [DOI] [PubMed] [Google Scholar]
- Lo Ten Foe J. R., Rooimans M. A., Joenje H., Arwert F. Novel frameshift mutation (1806insA) in exon 14 of the Fanconi anemia C gene, FAC. Hum Mutat. 1996;7(3):264–265. doi: 10.1002/(SICI)1098-1004(1996)7:3<264::AID-HUMU11>3.0.CO;2-0. [DOI] [PubMed] [Google Scholar]
- Murer-Orlando M., Llerena J. C., Jr, Birjandi F., Gibson R. A., Mathew C. G. FACC gene mutations and early prenatal diagnosis of Fanconi's anaemia. Lancet. 1993 Sep 11;342(8872):686–686. doi: 10.1016/0140-6736(93)91800-2. [DOI] [PubMed] [Google Scholar]
- Pronk J. C., Gibson R. A., Savoia A., Wijker M., Morgan N. V., Melchionda S., Ford D., Temtamy S., Ortega J. J., Jansen S. Localisation of the Fanconi anaemia complementation group A gene to chromosome 16q24.3. Nat Genet. 1995 Nov;11(3):338–340. doi: 10.1038/ng1195-338. [DOI] [PubMed] [Google Scholar]
- Sarkar G., Yoon H. S., Sommer S. S. Screening for mutations by RNA single-strand conformation polymorphism (rSSCP): comparison with DNA-SSCP. Nucleic Acids Res. 1992 Feb 25;20(4):871–878. doi: 10.1093/nar/20.4.871. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Savoia A., Zatterale A., Del Principe D., Joenje H. Fanconi anaemia in Italy: high prevalence of complementation group A in two geographic clusters. Hum Genet. 1996 May;97(5):599–603. doi: 10.1007/BF02281868. [DOI] [PubMed] [Google Scholar]
- Shapiro M. B., Senapathy P. RNA splice junctions of different classes of eukaryotes: sequence statistics and functional implications in gene expression. Nucleic Acids Res. 1987 Sep 11;15(17):7155–7174. doi: 10.1093/nar/15.17.7155. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Strathdee C. A., Duncan A. M., Buchwald M. Evidence for at least four Fanconi anaemia genes including FACC on chromosome 9. Nat Genet. 1992 Jun;1(3):196–198. doi: 10.1038/ng0692-196. [DOI] [PubMed] [Google Scholar]
- Strathdee C. A., Gavish H., Shannon W. R., Buchwald M. Cloning of cDNAs for Fanconi's anaemia by functional complementation. Nature. 1992 Apr 30;356(6372):763–767. doi: 10.1038/356763a0. [DOI] [PubMed] [Google Scholar]
- Verlander P. C., Lin J. D., Udono M. U., Zhang Q., Gibson R. A., Mathew C. G., Auerbach A. D. Mutation analysis of the Fanconi anemia gene FACC. Am J Hum Genet. 1994 Apr;54(4):595–601. [PMC free article] [PubMed] [Google Scholar]
- Whitney M. A., Saito H., Jakobs P. M., Gibson R. A., Moses R. E., Grompe M. A common mutation in the FACC gene causes Fanconi anaemia in Ashkenazi Jews. Nat Genet. 1993 Jun;4(2):202–205. doi: 10.1038/ng0693-202. [DOI] [PubMed] [Google Scholar]