Abstract
Penicillin-binding protein (PBP) 7 of Escherichia coli is a poorly characterized member of the family of enzymes that synthesize and modify the bacterial cell wall. The approximate chromosomal position of the gene encoding this protein was determined by measuring the expression of PBPs during lytic infection of E. coli by each of the 476 miniset members of the Kohara lambda phage genomic library. Phages lambda 363 and lambda 364, encompassing the region from 47.7 to 48 min of the chromosome, overproduced PBP 7. One open reading frame, yohB, was present on both these phages and directed the expression of PBPs 7 and 8. The predicted amino acid sequence of PBP 7 contains the consensus motifs associated with other PBPs and has a potential site near the carboxyl terminus where proteolysis by the OmpT protein could occur, creating an appropriately sized PBP 8. The PBP 7 gene (renamed pbpG) was interrupted by insertion of a kanamycin resistance gene cassette and was moved to the chromosome of E. coli. No obvious growth defects were observed, suggesting that PBP 7 is not essential for growth under normal laboratory conditions.
Full Text
The Full Text of this article is available as a PDF (326.5 KB).
Selected References
These references are in PubMed. This may not be the complete list of references from this article.
- Altschul S. F., Gish W., Miller W., Myers E. W., Lipman D. J. Basic local alignment search tool. J Mol Biol. 1990 Oct 5;215(3):403–410. doi: 10.1016/S0022-2836(05)80360-2. [DOI] [PubMed] [Google Scholar]
- Ayala J. A., de Pedro M. A., Vázquez D. Application of a charge/size two-dimensional gel electrophoresis system to the analysis of the penicillin-binding proteins of Escherichia coli. FEBS Lett. 1984 Mar 12;168(1):93–96. doi: 10.1016/0014-5793(84)80213-6. [DOI] [PubMed] [Google Scholar]
- Baneyx F., Georgiou G. Construction and characterization of Escherichia coli strains deficient in multiple secreted proteases: protease III degrades high-molecular-weight substrates in vivo. J Bacteriol. 1991 Apr;173(8):2696–2703. doi: 10.1128/jb.173.8.2696-2703.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Baneyx F., Georgiou G. In vivo degradation of secreted fusion proteins by the Escherichia coli outer membrane protease OmpT. J Bacteriol. 1990 Jan;172(1):491–494. doi: 10.1128/jb.172.1.491-494.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Barbas J. A., Díaz J., Rodríguez-Tébar A., Vázquez D. Specific location of penicillin-binding proteins within the cell envelope of Escherichia coli. J Bacteriol. 1986 Jan;165(1):269–275. doi: 10.1128/jb.165.1.269-275.1986. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Broome-Smith J. K. Construction of a mutant of Escherichia coli that has deletions of both the penicillin-binding protein 5 and 6 genes. J Gen Microbiol. 1985 Aug;131(8):2115–2118. doi: 10.1099/00221287-131-8-2115. [DOI] [PubMed] [Google Scholar]
- Chuang S. E., Daniels D. L., Blattner F. R. Global regulation of gene expression in Escherichia coli. J Bacteriol. 1993 Apr;175(7):2026–2036. doi: 10.1128/jb.175.7.2026-2036.1993. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Dreyfuss G., Adam S. A., Choi Y. D. Physical change in cytoplasmic messenger ribonucleoproteins in cells treated with inhibitors of mRNA transcription. Mol Cell Biol. 1984 Mar;4(3):415–423. doi: 10.1128/mcb.4.3.415. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Fellay R., Frey J., Krisch H. Interposon mutagenesis of soil and water bacteria: a family of DNA fragments designed for in vitro insertional mutagenesis of gram-negative bacteria. Gene. 1987;52(2-3):147–154. doi: 10.1016/0378-1119(87)90041-2. [DOI] [PubMed] [Google Scholar]
- Ghuysen J. M. Serine beta-lactamases and penicillin-binding proteins. Annu Rev Microbiol. 1991;45:37–67. doi: 10.1146/annurev.mi.45.100191.000345. [DOI] [PubMed] [Google Scholar]
- Hara H., Nishimura Y., Kato J., Suzuki H., Nagasawa H., Suzuki A., Hirota Y. Genetic analyses of processing involving C-terminal cleavage in penicillin-binding protein 3 of Escherichia coli. J Bacteriol. 1989 Nov;171(11):5882–5889. doi: 10.1128/jb.171.11.5882-5889.1989. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Henderson T. A., Dombrosky P. M., Young K. D. Artifactual processing of penicillin-binding proteins 7 and 1b by the OmpT protease of Escherichia coli. J Bacteriol. 1994 Jan;176(1):256–259. doi: 10.1128/jb.176.1.256-259.1994. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kohara Y., Akiyama K., Isono K. The physical map of the whole E. coli chromosome: application of a new strategy for rapid analysis and sorting of a large genomic library. Cell. 1987 Jul 31;50(3):495–508. doi: 10.1016/0092-8674(87)90503-4. [DOI] [PubMed] [Google Scholar]
- Kulakauskas S., Wikström P. M., Berg D. E. Efficient introduction of cloned mutant alleles into the Escherichia coli chromosome. J Bacteriol. 1991 Apr;173(8):2633–2638. doi: 10.1128/jb.173.8.2633-2638.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Malouin F., Chamberland S., Brochu N., Parr T. R., Jr Influence of growth media on Escherichia coli cell composition and ceftazidime susceptibility. Antimicrob Agents Chemother. 1991 Mar;35(3):477–483. doi: 10.1128/aac.35.3.477. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Mottl H., Keck W. Purification of penicillin-binding protein 4 of Escherichia coli as a soluble protein by dye-affinity chromatography. Eur J Biochem. 1991 Sep 15;200(3):767–773. doi: 10.1111/j.1432-1033.1991.tb16243.x. [DOI] [PubMed] [Google Scholar]
- Mottl H., Keck W. Rapid screening of a large number of immobilized textile dyes for the purification of proteins: use of penicillin-binding protein 4 of Escherichia coli as a model enzyme. Protein Expr Purif. 1992 Oct;3(5):403–409. doi: 10.1016/s1046-5928(05)80042-7. [DOI] [PubMed] [Google Scholar]
- Mottl H., Terpstra P., Keck W. Penicillin-binding protein 4 of Escherichia coli shows a novel type of primary structure among penicillin-interacting proteins. FEMS Microbiol Lett. 1991 Mar 1;62(2-3):213–220. doi: 10.1016/0378-1097(91)90160-c. [DOI] [PubMed] [Google Scholar]
- Murray N. E. Special uses of lambda phage for molecular cloning. Methods Enzymol. 1991;204:280–301. doi: 10.1016/0076-6879(91)04014-f. [DOI] [PubMed] [Google Scholar]
- Romeis T., Höltje J. V. Penicillin-binding protein 7/8 of Escherichia coli is a DD-endopeptidase. Eur J Biochem. 1994 Sep 1;224(2):597–604. doi: 10.1111/j.1432-1033.1994.00597.x. [DOI] [PubMed] [Google Scholar]
- Spratt B. G. Distinct penicillin binding proteins involved in the division, elongation, and shape of Escherichia coli K12. Proc Natl Acad Sci U S A. 1975 Aug;72(8):2999–3003. doi: 10.1073/pnas.72.8.2999. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Spratt B. G. Properties of the penicillin-binding proteins of Escherichia coli K12,. Eur J Biochem. 1977 Jan;72(2):341–352. doi: 10.1111/j.1432-1033.1977.tb11258.x. [DOI] [PubMed] [Google Scholar]
- Strauch K. L., Beckwith J. An Escherichia coli mutation preventing degradation of abnormal periplasmic proteins. Proc Natl Acad Sci U S A. 1988 Mar;85(5):1576–1580. doi: 10.1073/pnas.85.5.1576. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Tuomanen E., Schwartz J. Penicillin-binding protein 7 and its relationship to lysis of nongrowing Escherichia coli. J Bacteriol. 1987 Nov;169(11):4912–4915. doi: 10.1128/jb.169.11.4912-4915.1987. [DOI] [PMC free article] [PubMed] [Google Scholar]
- von Heijne G. A new method for predicting signal sequence cleavage sites. Nucleic Acids Res. 1986 Jun 11;14(11):4683–4690. doi: 10.1093/nar/14.11.4683. [DOI] [PMC free article] [PubMed] [Google Scholar]